AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59426

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59426.t1 MTR_5g021220 97.658 427 10 0 1 427 65 491 0.0 863
MS.gene59426.t1 MTR_8g076510 73.302 427 100 3 1 427 68 480 0.0 640
MS.gene59426.t1 MTR_8g016180 53.147 429 176 6 1 424 66 474 1.41e-157 453
MS.gene59426.t1 MTR_8g016180 51.261 357 154 4 1 355 66 404 1.93e-124 367
MS.gene59426.t1 MTR_5g082520 39.437 426 236 7 1 423 57 463 1.89e-110 333
MS.gene59426.t1 MTR_3g070380 37.705 427 244 6 1 423 58 466 4.88e-103 315
MS.gene59426.t1 MTR_8g077810 37.037 432 248 8 1 423 62 478 3.19e-97 300
MS.gene59426.t1 MTR_5g020020 35.664 429 255 7 1 423 65 478 2.09e-96 297
MS.gene59426.t1 MTR_7g033040 32.710 428 264 7 1 424 62 469 1.43e-77 249
MS.gene59426.t1 MTR_5g010750 31.579 399 258 2 1 399 60 443 1.77e-76 246
MS.gene59426.t1 MTR_3g007320 32.783 424 262 7 1 421 57 460 2.76e-76 245
MS.gene59426.t1 MTR_5g020020 36.103 349 202 7 81 423 71 404 4.00e-76 243
MS.gene59426.t1 MTR_7g016040 32.783 424 265 6 1 423 57 461 6.60e-76 244
MS.gene59426.t1 MTR_5g010750 31.910 398 256 3 1 398 60 442 2.42e-75 242
MS.gene59426.t1 MTR_6g015910 32.783 424 262 7 1 421 57 460 6.10e-75 241
MS.gene59426.t1 MTR_8g072260 34.515 423 240 10 8 422 69 462 5.92e-72 234
MS.gene59426.t1 MTR_6g069000 30.227 397 251 5 8 398 76 452 2.86e-70 229
MS.gene59426.t1 MTR_6g069000 30.227 397 251 5 8 398 86 462 4.86e-70 229
MS.gene59426.t1 MTR_8g072260 34.761 397 224 9 8 398 69 436 6.51e-68 223
MS.gene59426.t1 MTR_6g034940 30.930 430 276 10 1 425 68 481 1.92e-65 217
MS.gene59426.t1 MTR_4g086130 32.057 418 260 6 8 421 67 464 2.38e-65 216
MS.gene59426.t1 MTR_5g025610 31.765 425 253 10 8 424 67 462 3.78e-63 211
MS.gene59426.t1 MTR_4g086040 31.981 419 260 6 8 421 70 468 6.12e-62 207
MS.gene59426.t1 MTR_8g089800 32.997 397 249 6 8 400 79 462 5.63e-61 206
MS.gene59426.t1 MTR_1g019410 32.151 423 256 10 8 422 67 466 6.30e-60 202
MS.gene59426.t1 MTR_5g025610 31.738 397 236 9 8 398 67 434 4.74e-59 199
MS.gene59426.t1 MTR_1g037580 30.095 422 272 7 4 422 72 473 1.50e-57 196
MS.gene59426.t1 MTR_0045s0060 30.867 392 245 10 11 400 1 368 1.72e-57 194
MS.gene59426.t1 MTR_0045s0060 30.370 405 253 11 1 400 70 450 2.53e-56 193
MS.gene59426.t1 MTR_2g031920 30.496 423 259 7 10 426 81 474 3.94e-56 193
MS.gene59426.t1 MTR_5g092150 28.607 402 271 7 1 400 58 445 1.14e-55 191
MS.gene59426.t1 MTR_3g467130 30.698 430 277 7 1 424 62 476 3.28e-55 190
MS.gene59426.t1 MTR_2g031930 29.953 424 267 7 6 426 79 475 1.23e-54 189
MS.gene59426.t1 MTR_2g031930 30.556 396 257 6 6 398 75 455 3.23e-54 187
MS.gene59426.t1 MTR_0045s0070 29.630 405 254 11 1 400 72 450 1.17e-53 186
MS.gene59426.t1 MTR_8g100135 27.546 432 292 7 1 427 64 479 1.97e-52 182
MS.gene59426.t1 MTR_8g072260 33.240 358 207 8 8 359 69 400 2.44e-52 182
MS.gene59426.t1 MTR_3g112120 28.337 427 279 9 4 422 74 481 5.49e-52 182
MS.gene59426.t1 MTR_0045s0070 29.280 403 254 11 1 398 72 448 9.23e-52 180
MS.gene59426.t1 MTR_5g091760 26.914 431 280 13 4 424 71 476 3.80e-51 179
MS.gene59426.t1 MTR_3g467140 29.138 429 285 7 1 424 62 476 1.28e-49 175
MS.gene59426.t1 MTR_5g014250 28.271 428 285 8 6 426 79 491 2.60e-49 174
MS.gene59426.t1 MTR_7g016040 30.000 320 206 4 1 320 57 358 2.25e-46 164
MS.gene59426.t1 MTR_8g012970 28.392 398 267 8 4 400 79 459 1.57e-45 164
MS.gene59426.t1 MTR_4g005230 28.744 414 261 11 10 413 83 472 2.95e-45 164
MS.gene59426.t1 MTR_5g025610 30.056 356 217 8 8 357 67 396 1.59e-44 160
MS.gene59426.t1 MTR_8g076940 27.546 432 280 10 4 426 79 486 3.14e-44 161
MS.gene59426.t1 MTR_5g014240 28.738 428 283 10 6 426 78 490 8.27e-43 157
MS.gene59426.t1 MTR_0045s0080 28.492 358 226 7 1 354 70 401 1.93e-41 152
MS.gene59426.t1 MTR_1g032950 27.960 397 248 7 10 400 83 447 1.36e-39 148
MS.gene59426.t1 MTR_3g467140 29.755 326 211 6 103 424 32 343 1.16e-36 137
MS.gene59426.t1 MTR_8g076940 27.528 356 235 7 4 355 79 415 6.04e-33 129
MS.gene59426.t1 MTR_8g089190 23.153 406 271 10 11 400 37 417 6.32e-33 129
MS.gene59426.t1 MTR_8g100135 24.024 333 236 5 1 330 64 382 3.56e-27 112
MS.gene59426.t1 MTR_8g076940 25.926 324 217 7 4 323 79 383 6.53e-23 100
MS.gene59426.t1 MTR_5g007460 29.167 240 152 5 168 404 223 447 8.21e-23 100
MS.gene59426.t1 MTR_8g076940 26.168 321 214 7 4 320 79 380 8.22e-23 99.8
MS.gene59426.t1 MTR_1g103670 30.040 253 163 6 154 402 224 466 8.21e-22 97.8
MS.gene59426.t1 MTR_5g021390 24.279 416 282 15 8 400 75 480 1.15e-21 97.4
MS.gene59426.t1 MTR_5g007550 29.752 242 146 7 168 404 246 468 1.59e-21 97.1
MS.gene59426.t1 MTR_1g032980 24.561 399 221 11 6 400 50 372 4.20e-21 95.1
MS.gene59426.t1 MTR_5g007450 29.583 240 145 7 168 402 246 466 4.82e-21 95.5
MS.gene59426.t1 MTR_4g095050 26.736 288 183 9 130 405 198 469 5.23e-21 95.5
MS.gene59426.t1 MTR_1g031700 27.305 282 185 7 154 425 224 495 8.60e-20 92.0
MS.gene59426.t1 MTR_2g073480 26.460 291 187 8 139 425 135 402 8.81e-19 88.2
MS.gene59426.t1 MTR_8g046240 28.269 283 162 10 161 425 245 504 1.21e-18 88.6
MS.gene59426.t1 MTR_2g073440 26.460 291 187 8 139 425 202 469 1.47e-18 87.8
MS.gene59426.t1 MTR_0171s0010 26.394 269 181 5 164 425 247 505 2.85e-18 87.4
MS.gene59426.t1 MTR_4g071710 22.673 419 292 11 8 400 68 480 4.36e-18 86.7
MS.gene59426.t1 MTR_2g073420 26.446 242 160 5 167 405 254 480 8.47e-18 85.9
MS.gene59426.t1 MTR_1g103680 27.719 285 171 9 155 425 233 496 1.12e-17 85.5
MS.gene59426.t1 MTR_1g037370 28.293 205 134 4 199 400 267 461 1.98e-17 84.7
MS.gene59426.t1 MTR_4g062500 27.731 238 153 6 171 400 253 479 3.00e-17 84.3
MS.gene59426.t1 MTR_5g073020 26.103 272 188 6 134 400 206 469 1.04e-16 82.4
MS.gene59426.t1 MTR_5g072980 28.704 216 138 6 199 406 272 479 1.37e-16 82.0
MS.gene59426.t1 MTR_5g072930 28.704 216 138 6 199 406 272 479 1.37e-16 82.0
MS.gene59426.t1 MTR_8g098565 26.629 353 221 12 98 424 165 505 2.05e-16 81.6
MS.gene59426.t1 MTR_7g075580 26.277 274 172 9 167 427 246 502 2.08e-16 81.6
MS.gene59426.t1 MTR_2g010250 28.571 273 175 8 167 424 237 504 2.42e-16 81.3
MS.gene59426.t1 MTR_2g010300 28.959 221 122 7 218 424 289 488 3.98e-16 80.5
MS.gene59426.t1 MTR_8g046210 26.855 283 166 9 161 425 245 504 4.80e-16 80.5
MS.gene59426.t1 MTR_5g056720 25.094 267 165 8 168 427 187 425 5.30e-16 80.1
MS.gene59426.t1 MTR_4g078110 31.818 176 111 4 231 402 276 446 5.43e-16 80.1
MS.gene59426.t1 MTR_1g055325 25.373 268 177 7 162 425 259 507 6.42e-16 80.1
MS.gene59426.t1 MTR_0171s0020 26.667 240 159 7 167 400 247 475 6.46e-16 80.1
MS.gene59426.t1 MTR_1g492820 22.695 423 288 11 5 401 76 485 8.29e-16 79.7
MS.gene59426.t1 MTR_8g036185 24.496 347 227 11 86 404 150 489 8.83e-16 79.7
MS.gene59426.t1 MTR_0181s0030 26.389 288 186 8 148 425 226 497 1.12e-15 79.3
MS.gene59426.t1 MTR_5g014230 43.590 78 40 2 338 413 1 76 1.33e-15 72.8
MS.gene59426.t1 MTR_2g010290 28.358 268 155 9 178 424 280 531 1.37e-15 79.0
MS.gene59426.t1 MTR_4g026200 26.038 265 173 7 167 420 237 489 2.00e-15 78.6
MS.gene59426.t1 MTR_5g045250 24.444 450 263 21 19 425 102 517 2.07e-15 78.6
MS.gene59426.t1 MTR_3g104560 25.556 270 153 6 153 404 136 375 2.27e-15 77.8
MS.gene59426.t1 MTR_7g012330 25.735 272 183 6 135 400 208 466 2.30e-15 78.2
MS.gene59426.t1 MTR_1g097240 26.493 268 177 6 168 426 239 495 2.36e-15 78.2
MS.gene59426.t1 MTR_1g091023 27.953 254 153 8 157 404 237 466 2.56e-15 78.2
MS.gene59426.t1 MTR_1g015860 27.386 241 154 6 175 397 258 495 2.71e-15 78.2
MS.gene59426.t1 MTR_3g104560 25.556 270 153 6 153 404 271 510 4.20e-15 77.8
MS.gene59426.t1 MTR_2g010380 27.336 289 184 8 154 424 228 508 4.58e-15 77.4
MS.gene59426.t1 MTR_1g091003 26.848 257 159 8 176 426 251 484 5.30e-15 77.0
MS.gene59426.t1 MTR_0451s0010 26.693 251 166 7 161 404 54 293 5.80e-15 75.9
MS.gene59426.t1 MTR_4g104660 25.287 261 174 9 176 426 264 513 5.86e-15 77.0
MS.gene59426.t1 MTR_2g010330 28.774 212 141 5 195 400 270 477 6.03e-15 77.0
MS.gene59426.t1 MTR_7g075600 23.593 462 301 17 1 427 58 502 6.57e-15 77.0
MS.gene59426.t1 MTR_7g028020 27.459 244 156 6 168 399 234 468 6.83e-15 77.0
MS.gene59426.t1 MTR_3g020780 26.667 240 158 5 176 404 250 482 7.05e-15 77.0
MS.gene59426.t1 MTR_2g019640 23.953 430 279 15 12 412 77 487 7.73e-15 76.6
MS.gene59426.t1 MTR_7g103450 27.612 268 170 8 168 427 261 512 7.93e-15 76.6
MS.gene59426.t1 MTR_5g018980 24.478 335 222 11 76 400 160 473 1.12e-14 76.3
MS.gene59426.t1 MTR_7g027960 27.459 244 156 6 168 399 234 468 1.30e-14 76.3
MS.gene59426.t1 MTR_8g020940 23.494 332 212 11 92 399 157 470 1.52e-14 75.9
MS.gene59426.t1 MTR_1g107295 24.597 248 171 5 161 400 242 481 1.64e-14 75.9
MS.gene59426.t1 MTR_5g095220 24.342 304 214 7 102 400 145 437 1.90e-14 75.5
MS.gene59426.t1 MTR_2g437880 25.692 253 169 8 177 422 250 490 2.11e-14 75.5
MS.gene59426.t1 MTR_4g035330 30.601 183 119 4 224 405 278 453 2.16e-14 75.5
MS.gene59426.t1 MTR_7g075540 24.436 266 173 7 169 423 248 496 2.43e-14 75.1
MS.gene59426.t1 MTR_8g469300 24.364 275 179 7 164 425 244 502 6.01e-14 73.9
MS.gene59426.t1 MTR_8g468780 24.809 262 176 7 148 402 160 407 8.44e-14 73.2
MS.gene59426.t1 MTR_1g107300 28.313 166 110 3 239 400 9 169 9.83e-14 70.5
MS.gene59426.t1 MTR_4g026030 25.000 240 159 7 167 399 85 310 9.83e-14 72.4
MS.gene59426.t1 MTR_3g076560 26.582 237 157 6 200 426 286 515 1.04e-13 73.2
MS.gene59426.t1 MTR_3g057910 21.928 415 289 12 8 400 69 470 1.14e-13 73.2
MS.gene59426.t1 MTR_1g023730 24.887 221 152 5 185 400 267 478 1.47e-13 72.8
MS.gene59426.t1 MTR_2g010320 28.155 206 138 5 202 401 273 474 1.50e-13 72.8
MS.gene59426.t1 MTR_7g075610 26.316 209 140 6 197 400 271 470 2.53e-13 72.0
MS.gene59426.t1 MTR_8g076290 24.898 245 170 5 163 400 235 472 2.68e-13 72.0
MS.gene59426.t1 MTR_4g062510 26.064 188 127 3 220 400 301 483 2.99e-13 72.0
MS.gene59426.t1 MTR_7g055793 22.249 418 287 14 1 398 40 439 3.19e-13 71.6
MS.gene59426.t1 MTR_7g092620 27.692 195 125 4 216 402 289 475 3.70e-13 71.6
MS.gene59426.t1 MTR_7g055793 22.249 418 287 14 1 398 95 494 3.89e-13 71.6
MS.gene59426.t1 MTR_7g056103 23.967 242 164 4 167 399 244 474 3.96e-13 71.6
MS.gene59426.t1 MTR_1g116890 25.651 269 177 7 167 425 250 505 1.02e-12 70.1
MS.gene59426.t1 MTR_3g025230 28.889 180 117 4 230 402 300 475 1.05e-12 70.1
MS.gene59426.t1 MTR_3g057900 23.671 414 278 14 8 400 68 464 1.21e-12 69.7
MS.gene59426.t1 MTR_4g104640 24.345 267 178 7 172 426 264 518 1.25e-12 70.1
MS.gene59426.t1 MTR_0457s0020 23.113 212 147 4 51 261 25 221 1.69e-12 67.0
MS.gene59426.t1 MTR_4g026050 24.180 244 168 6 167 400 227 463 1.97e-12 69.3
MS.gene59426.t1 MTR_1g023720 24.400 250 172 6 185 424 267 509 2.13e-12 69.3
MS.gene59426.t1 MTR_4g088160 25.543 184 122 4 224 397 292 470 2.22e-12 69.3
MS.gene59426.t1 MTR_5g094570 24.615 260 183 7 146 400 216 467 3.30e-12 68.6
MS.gene59426.t1 MTR_4g088170 24.167 240 158 8 172 397 243 472 3.99e-12 68.2
MS.gene59426.t1 MTR_1g097220 23.643 258 177 6 159 407 259 505 4.00e-12 68.2
MS.gene59426.t1 MTR_1g023700 22.096 353 242 9 93 425 172 511 5.05e-12 68.2
MS.gene59426.t1 MTR_5g095260 23.472 409 284 12 8 400 73 468 5.69e-12 67.8
MS.gene59426.t1 MTR_6g008530 28.090 178 111 6 225 391 320 491 8.65e-12 67.4
MS.gene59426.t1 MTR_4g088195 23.109 238 161 8 172 397 243 470 1.04e-11 67.0
MS.gene59426.t1 MTR_6g042610 28.440 218 135 9 187 391 272 481 1.06e-11 67.0
MS.gene59426.t1 MTR_5g023680 24.670 227 160 5 178 400 220 439 1.29e-11 66.6
MS.gene59426.t1 MTR_8g008530 21.394 416 293 14 3 399 90 490 1.55e-11 66.6
MS.gene59426.t1 MTR_4g025980 26.108 203 140 5 201 400 268 463 1.72e-11 66.2
MS.gene59426.t1 MTR_1g031710 27.570 214 136 6 194 402 75 274 2.03e-11 65.1
MS.gene59426.t1 MTR_1g090987 32.800 125 80 3 283 404 31 154 2.09e-11 62.8
MS.gene59426.t1 MTR_4g018800 28.814 177 111 5 225 391 316 487 2.32e-11 65.9
MS.gene59426.t1 MTR_6g022450 23.030 330 212 10 102 407 175 486 3.78e-11 65.1
MS.gene59426.t1 MTR_0171s0030 26.027 219 144 5 169 382 164 369 3.98e-11 65.1
MS.gene59426.t1 MTR_1g062190 27.059 255 161 8 152 393 266 508 5.65e-11 64.7
MS.gene59426.t1 MTR_4g026080 24.752 202 135 5 234 424 2 197 8.15e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59426.t1 AT4G36380 64.637 427 137 4 1 425 98 512 0.0 564
MS.gene59426.t1 AT3G13730 51.174 426 193 5 1 425 80 491 2.42e-153 443
MS.gene59426.t1 AT3G13730 50.627 399 182 5 1 398 80 464 8.21e-142 413
MS.gene59426.t1 AT4G36380 62.928 321 106 3 1 320 98 406 3.19e-138 402
MS.gene59426.t1 AT5G05690 40.984 427 228 7 1 423 60 466 1.60e-109 331
MS.gene59426.t1 AT3G50660 35.730 445 266 6 1 425 68 512 1.57e-91 286
MS.gene59426.t1 AT5G05690 40.599 367 194 7 61 423 1 347 5.40e-90 277
MS.gene59426.t1 AT5G05690 38.889 360 198 5 1 358 60 399 1.50e-83 262
MS.gene59426.t1 AT4G19230 35.059 425 243 10 1 420 61 457 1.97e-77 248
MS.gene59426.t1 AT1G73340 30.536 429 268 7 1 422 72 477 8.96e-77 247
MS.gene59426.t1 AT4G19230 35.323 402 229 9 1 399 61 434 8.91e-75 241
MS.gene59426.t1 AT5G45340 32.936 419 252 7 8 423 68 460 7.30e-74 239
MS.gene59426.t1 AT5G38970 31.850 427 268 8 1 424 58 464 1.50e-72 235
MS.gene59426.t1 AT3G50660 34.699 366 230 4 1 357 68 433 2.58e-72 234
MS.gene59426.t1 AT5G14400 33.023 430 243 10 1 424 25 415 8.23e-72 232
MS.gene59426.t1 AT1G12740 31.421 401 258 4 1 400 60 444 1.07e-71 233
MS.gene59426.t1 AT1G12740 31.726 394 252 4 8 400 73 450 2.14e-71 233
MS.gene59426.t1 AT5G45340 33.163 392 235 6 8 398 68 433 2.14e-70 229
MS.gene59426.t1 AT3G19270 33.735 415 252 6 8 419 66 460 2.43e-70 229
MS.gene59426.t1 AT2G29090 33.178 428 258 9 4 425 77 482 9.02e-70 228
MS.gene59426.t1 AT2G29090 33.178 428 258 9 4 425 77 482 9.02e-70 228
MS.gene59426.t1 AT1G12740 30.958 407 258 5 1 400 60 450 3.28e-69 227
MS.gene59426.t1 AT3G19270 33.588 393 240 5 8 399 66 438 4.00e-68 223
MS.gene59426.t1 AT5G14400 33.416 404 225 9 1 399 25 389 4.80e-67 219
MS.gene59426.t1 AT5G38970 31.592 402 252 8 26 424 2 383 1.74e-66 217
MS.gene59426.t1 AT5G38970 31.592 402 252 8 26 424 2 383 1.74e-66 217
MS.gene59426.t1 AT3G30180 30.374 428 273 8 1 424 58 464 7.93e-66 218
MS.gene59426.t1 AT2G29090 32.678 407 246 9 25 425 3 387 1.83e-63 209
MS.gene59426.t1 AT1G55940 31.429 420 267 9 9 422 83 487 5.00e-62 209
MS.gene59426.t1 AT5G14400 32.161 398 225 10 33 424 3 361 1.02e-60 201
MS.gene59426.t1 AT1G55940 31.726 394 251 7 9 397 83 463 2.67e-60 203
MS.gene59426.t1 AT1G19630 29.673 428 269 9 4 422 68 472 7.18e-59 200
MS.gene59426.t1 AT3G44970 30.524 439 261 8 1 423 64 474 2.36e-58 198
MS.gene59426.t1 AT1G19630 29.899 398 258 7 4 399 68 446 2.01e-56 192
MS.gene59426.t1 AT4G15300 30.380 395 250 9 8 399 61 433 5.30e-56 192
MS.gene59426.t1 AT4G15300 30.380 395 250 9 8 399 71 443 6.65e-56 192
MS.gene59426.t1 AT5G48000 29.167 432 274 7 1 422 64 473 2.39e-54 188
MS.gene59426.t1 AT5G48000 29.167 432 274 7 1 422 64 473 2.39e-54 188
MS.gene59426.t1 AT5G48000 29.167 432 274 7 1 422 64 473 2.39e-54 188
MS.gene59426.t1 AT5G48000 29.167 432 274 7 1 422 64 473 2.39e-54 188
MS.gene59426.t1 AT5G48000 29.167 432 274 7 1 422 64 473 2.39e-54 188
MS.gene59426.t1 AT5G48000 29.167 432 274 7 1 422 64 473 2.39e-54 188
MS.gene59426.t1 AT5G48000 29.167 432 274 7 1 422 105 514 1.05e-53 187
MS.gene59426.t1 AT1G05160 29.684 411 271 7 8 413 81 478 1.16e-53 186
MS.gene59426.t1 AT1G05160 29.684 411 271 7 8 413 81 478 1.16e-53 186
MS.gene59426.t1 AT4G15300 29.197 411 252 10 6 399 67 455 1.23e-51 181
MS.gene59426.t1 AT1G78490 28.671 429 280 10 1 422 64 473 3.48e-51 179
MS.gene59426.t1 AT5G38970 28.933 356 232 6 1 354 58 394 3.57e-50 175
MS.gene59426.t1 AT2G32440 29.545 396 261 7 8 400 80 460 6.64e-50 176
MS.gene59426.t1 AT2G32440 29.545 396 261 7 8 400 80 460 6.64e-50 176
MS.gene59426.t1 AT5G36110 27.751 418 279 7 11 424 77 475 1.10e-49 175
MS.gene59426.t1 AT4G15396 28.788 396 256 10 8 399 71 444 3.86e-48 171
MS.gene59426.t1 AT5G14400 32.308 325 196 7 1 320 25 330 1.39e-47 166
MS.gene59426.t1 AT4G15393 28.894 398 251 12 8 399 71 442 2.24e-47 169
MS.gene59426.t1 AT3G30290 30.357 392 246 12 12 399 5 373 7.30e-47 166
MS.gene59426.t1 AT4G15396 28.535 396 257 10 8 399 71 444 1.37e-46 167
MS.gene59426.t1 AT1G65670 27.470 415 260 11 8 410 71 456 5.27e-46 166
MS.gene59426.t1 AT1G19630 28.814 354 234 6 4 355 68 405 1.09e-44 161
MS.gene59426.t1 AT1G12740 28.972 321 211 4 1 320 60 364 1.96e-44 159
MS.gene59426.t1 AT2G42850 26.761 426 278 13 8 424 82 482 5.30e-44 160
MS.gene59426.t1 AT4G15396 27.778 396 239 11 8 399 71 423 2.40e-40 150
MS.gene59426.t1 AT4G15310 25.622 402 275 8 1 399 66 446 1.17e-38 145
MS.gene59426.t1 AT4G15396 27.195 353 233 8 8 357 71 402 2.05e-35 135
MS.gene59426.t1 AT4G15393 26.989 352 229 9 8 355 71 398 6.49e-35 134
MS.gene59426.t1 AT1G78490 26.593 361 240 9 1 355 64 405 6.87e-35 134
MS.gene59426.t1 AT2G42850 26.235 324 220 8 8 329 82 388 4.55e-27 112
MS.gene59426.t1 AT5G36130 36.957 138 82 2 290 424 3 138 9.60e-26 102
MS.gene59426.t1 AT5G36110 24.923 325 216 6 11 329 77 379 3.08e-25 106
MS.gene59426.t1 AT4G15393 24.716 352 204 10 8 355 71 365 1.29e-23 102
MS.gene59426.t1 AT2G29090 26.866 268 173 7 4 267 77 325 4.96e-23 99.8
MS.gene59426.t1 AT1G33730 28.512 242 161 4 162 400 106 338 5.66e-23 100
MS.gene59426.t1 AT1G33730 28.512 242 161 4 162 400 106 338 5.66e-23 100
MS.gene59426.t1 AT4G37430 27.969 261 170 7 167 422 240 487 9.13e-19 89.0
MS.gene59426.t1 AT2G45550 22.651 415 292 9 7 400 68 474 1.39e-18 88.2
MS.gene59426.t1 AT2G45560 26.556 241 153 6 167 400 251 474 1.70e-18 88.2
MS.gene59426.t1 AT4G37410 25.475 263 174 7 167 422 237 484 2.47e-18 87.4
MS.gene59426.t1 AT2G45580 23.790 248 175 7 158 402 87 323 2.71e-18 86.3
MS.gene59426.t1 AT4G37400 24.432 352 235 10 85 420 146 482 4.38e-18 86.7
MS.gene59426.t1 AT4G37370 26.667 240 159 6 168 406 240 463 6.22e-18 86.3
MS.gene59426.t1 AT2G45580 23.790 248 175 7 158 402 241 477 6.93e-18 86.3
MS.gene59426.t1 AT2G45570 24.350 423 274 16 8 400 69 475 8.70e-18 85.9
MS.gene59426.t1 AT4G37340 24.518 363 231 11 84 420 146 491 4.66e-17 83.6
MS.gene59426.t1 AT4G13770 27.692 195 135 4 210 400 274 466 5.66e-17 83.2
MS.gene59426.t1 AT1G33720 26.316 190 133 3 214 400 157 342 7.66e-17 82.0
MS.gene59426.t1 AT1G33720 26.316 190 133 3 214 400 157 342 7.66e-17 82.0
MS.gene59426.t1 AT1G33720 26.316 190 133 3 214 400 157 342 7.66e-17 82.0
MS.gene59426.t1 AT5G67310 22.738 431 299 14 10 420 76 492 1.34e-16 82.0
MS.gene59426.t1 AT1G33720 24.167 240 167 5 164 400 247 474 1.36e-16 82.0
MS.gene59426.t1 AT4G36220 27.935 247 165 4 163 400 240 482 2.93e-16 81.3
MS.gene59426.t1 AT4G15360 24.611 321 211 8 103 406 175 481 3.14e-16 81.3
MS.gene59426.t1 AT3G28740 28.992 238 138 8 171 400 252 466 3.26e-16 80.9
MS.gene59426.t1 AT5G04330 25.725 276 180 7 167 426 237 503 4.93e-16 80.5
MS.gene59426.t1 AT3G61040 28.365 208 136 5 199 402 267 465 7.07e-16 80.1
MS.gene59426.t1 AT3G44970 24.074 324 203 7 1 309 64 359 1.01e-15 78.6
MS.gene59426.t1 AT2G26170 27.344 256 152 7 153 397 173 405 1.08e-15 79.0
MS.gene59426.t1 AT2G26170 27.344 256 152 7 153 397 256 488 1.21e-15 79.3
MS.gene59426.t1 AT5G44620 24.265 272 179 9 164 425 255 509 1.35e-15 79.3
MS.gene59426.t1 AT4G37360 25.283 265 169 7 165 420 237 481 1.37e-15 79.0
MS.gene59426.t1 AT1G33720 27.907 172 117 3 232 400 200 367 1.79e-15 78.2
MS.gene59426.t1 AT1G50520 25.000 352 210 13 105 426 182 509 2.40e-15 78.6
MS.gene59426.t1 AT4G37320 25.670 261 173 7 167 422 239 483 3.09e-15 77.8
MS.gene59426.t1 AT3G26210 24.900 249 180 4 154 399 222 466 4.83e-15 77.4
MS.gene59426.t1 AT4G37310 23.361 244 176 5 160 401 237 471 4.93e-15 77.4
MS.gene59426.t1 AT5G25140 26.749 243 162 6 193 425 255 491 1.77e-14 75.5
MS.gene59426.t1 AT3G26230 25.751 233 163 6 200 425 266 495 1.79e-14 75.5
MS.gene59426.t1 AT5G25120 25.651 269 177 8 167 425 236 491 2.62e-14 75.1
MS.gene59426.t1 AT1G66540 25.000 244 151 7 166 400 66 286 3.80e-14 73.6
MS.gene59426.t1 AT1G66540 25.000 244 151 7 166 400 125 345 5.39e-14 73.6
MS.gene59426.t1 AT3G26180 24.681 235 164 6 200 425 135 365 6.05e-14 73.2
MS.gene59426.t1 AT4G31500 28.962 183 118 6 224 399 287 464 6.46e-14 73.9
MS.gene59426.t1 AT5G57220 24.615 260 176 7 167 422 235 478 7.25e-14 73.6
MS.gene59426.t1 AT4G12330 24.627 268 179 7 164 425 258 508 9.86e-14 73.6
MS.gene59426.t1 AT5G09970 24.703 421 268 19 17 407 111 512 1.02e-13 73.6
MS.gene59426.t1 AT2G42250 28.022 182 117 3 230 401 304 481 1.45e-13 72.8
MS.gene59426.t1 AT5G36140 21.933 269 183 5 2 264 64 311 1.61e-13 71.6
MS.gene59426.t1 AT1G64950 25.847 236 161 6 169 400 252 477 1.64e-13 72.8
MS.gene59426.t1 AT3G26180 24.681 235 164 6 200 425 269 499 1.85e-13 72.4
MS.gene59426.t1 AT5G10610 29.817 218 144 5 212 424 274 487 2.65e-13 72.0
MS.gene59426.t1 AT3G20940 22.051 390 265 9 63 426 132 508 4.41e-13 71.2
MS.gene59426.t1 AT5G25130 31.138 167 108 3 237 400 298 460 5.61e-13 70.9
MS.gene59426.t1 AT1G13110 23.985 271 192 6 136 399 206 469 5.97e-13 70.9
MS.gene59426.t1 AT5G10600 28.638 213 134 6 224 427 298 501 6.27e-13 70.9
MS.gene59426.t1 AT3G26170 24.255 235 165 6 200 425 269 499 6.79e-13 70.9
MS.gene59426.t1 AT5G35715 24.268 239 165 6 164 399 177 402 8.22e-13 70.5
MS.gene59426.t1 AT2G12190 26.471 238 159 7 169 400 252 479 8.28e-13 70.5
MS.gene59426.t1 AT3G32047 22.297 296 191 7 116 406 220 481 8.49e-13 70.5
MS.gene59426.t1 AT4G37330 24.342 304 199 9 130 422 197 480 1.37e-12 69.7
MS.gene59426.t1 AT1G64940 24.576 236 164 6 169 400 253 478 1.89e-12 69.3
MS.gene59426.t1 AT1G74110 24.535 269 160 11 154 399 259 507 2.53e-12 68.9
MS.gene59426.t1 AT4G12300 22.500 280 198 7 153 425 239 506 2.56e-12 68.9
MS.gene59426.t1 AT1G13080 22.314 242 170 5 196 425 146 381 2.89e-12 68.2
MS.gene59426.t1 AT1G13080 22.314 242 170 5 196 425 264 499 4.36e-12 68.2
MS.gene59426.t1 AT1G64930 26.374 182 124 5 232 406 307 485 7.36e-12 67.4
MS.gene59426.t1 AT3G20950 21.785 381 233 12 63 406 136 488 7.75e-12 67.4
MS.gene59426.t1 AT4G15330 24.742 291 176 9 132 406 187 450 1.34e-11 66.6
MS.gene59426.t1 AT4G15330 25.086 291 175 9 132 406 215 478 1.51e-11 66.6
MS.gene59426.t1 AT1G13100 23.810 231 166 4 184 407 248 475 1.55e-11 66.6
MS.gene59426.t1 AT2G28850 21.853 421 287 15 16 415 79 478 2.26e-11 65.9
MS.gene59426.t1 AT4G22690 21.318 258 182 7 153 405 282 523 2.27e-11 66.2
MS.gene59426.t1 AT3G25180 25.182 274 161 8 159 422 262 501 2.41e-11 65.9
MS.gene59426.t1 AT4G22710 21.318 258 182 7 153 405 251 492 2.47e-11 65.9
MS.gene59426.t1 AT1G50560 23.973 292 181 9 153 426 242 510 3.31e-11 65.5
MS.gene59426.t1 AT3G03470 24.901 253 174 4 188 424 256 508 4.57e-11 65.1
MS.gene59426.t1 AT3G20960 23.048 269 190 6 166 425 245 505 6.11e-11 64.7
MS.gene59426.t1 AT3G20960 22.993 274 184 7 166 425 142 402 6.50e-11 64.3
MS.gene59426.t1 AT1G74550 31.148 122 81 2 283 401 329 450 7.79e-11 64.3
MS.gene59426.t1 AT2G46960 22.197 446 311 15 2 425 86 517 8.45e-11 64.3

Find 116 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGATTACATTTCCTATTT+TGG 0.085903 5.4:-12992930 MS.gene59426:intron
ATTAATTCTCTAATTGATTT+TGG 0.133983 5.4:+12993257 None:intergenic
GTTCTATGCTTGCAGAAAAT+TGG 0.194013 5.4:-12990174 MS.gene59426:intron
TTTAGTTTGTGGGACCTTTA+AGG 0.198069 5.4:+12992784 None:intergenic
AGAACTACCTTGTTCACTTC+TGG 0.239862 5.4:+12993314 None:intergenic
AAAATCAATTAGAGAATTAA+TGG 0.246586 5.4:-12993255 MS.gene59426:CDS
TGTGTTTAAGACAAACATTT+TGG 0.256802 5.4:-12993363 MS.gene59426:CDS
GTAAAAGATGTAGAAATTAA+AGG 0.257881 5.4:-12990477 MS.gene59426:intron
AACAATTGCTTTACCCCGTT+TGG 0.287823 5.4:-12990138 MS.gene59426:CDS
AACACTATACAAATCCTTAA+AGG 0.295030 5.4:-12992798 MS.gene59426:intron
GTAATGGGTTGCACTCTAAT+TGG 0.302320 5.4:+12989888 None:intergenic
TCCTAAAGATTGGGGTGTTA+TGG 0.302852 5.4:-12990350 MS.gene59426:CDS
TCATAAACTCGATGATGTTT+TGG 0.311295 5.4:+12992070 None:intergenic
AGAATGGCAAATATAGTTAA+TGG 0.320179 5.4:-12990516 MS.gene59426:CDS
ATCAAAACTTTAACCAAAAT+AGG 0.329280 5.4:+12992917 None:intergenic
CAAATATAGTTAATGGCATT+TGG 0.330060 5.4:-12990509 MS.gene59426:CDS
GTCCTGGGTTAGAACTTTCC+AGG 0.336224 5.4:-12990098 MS.gene59426:CDS
GGTACTTAATTCCTAAAGAT+TGG 0.340150 5.4:-12990360 MS.gene59426:CDS
TGCTTACCCATCAAGTTTCC+AGG 0.342322 5.4:-12992824 MS.gene59426:CDS
AAGTGAACTTACCATAAGTT+TGG 0.362544 5.4:+12991972 None:intergenic
GTACTTAATTCCTAAAGATT+GGG 0.362774 5.4:-12990359 MS.gene59426:CDS
GGCTAATCATTTCCACCATC+AGG 0.366977 5.4:+12992091 None:intergenic
CGTTGGTCCTGGTGAAGATT+TGG 0.367893 5.4:-12992891 MS.gene59426:CDS
TGTGCATGGTCCCGTTCAAT+TGG 0.379552 5.4:+12993216 None:intergenic
GTCTATGTCCACTCCCAAAC+GGG 0.383770 5.4:+12990124 None:intergenic
GCCATAACACCCCAATCTTT+AGG 0.387813 5.4:+12990349 None:intergenic
ACAATTGCTTTACCCCGTTT+GGG 0.392525 5.4:-12990137 MS.gene59426:CDS
GTAGGAAGGGTCTCTTCCCC+TGG 0.393850 5.4:+12992045 None:intergenic
GATTTGTATAGTGTTGTTCC+TGG 0.395515 5.4:+12992806 None:intergenic
TCTTGCTCTATCCAAACTTA+TGG 0.396110 5.4:-12991983 MS.gene59426:intron
GGAGAGAATGAAGCTAATAA+TGG 0.399962 5.4:-12992217 MS.gene59426:CDS
CTCCATGGATCAAACTTGTA+AGG 0.405917 5.4:+12990283 None:intergenic
ATCTCTTACCTCTGTTCATA+TGG 0.407206 5.4:-12990326 MS.gene59426:CDS
TCAAACAATGCTTAGCATCT+TGG 0.408205 5.4:-12993112 MS.gene59426:CDS
GTGATTTGAGATTTAAATTG+TGG 0.415031 5.4:+12993155 None:intergenic
TCGGTCCATGTATAACCATC+TGG 0.422147 5.4:+12990668 None:intergenic
GAACTACCTTGTTCACTTCT+GGG 0.425392 5.4:+12993315 None:intergenic
CTAATCCAATCAAGCGGTAA+TGG 0.427330 5.4:+12989872 None:intergenic
GGATGCACTCCTAAGGGATA+AGG 0.428688 5.4:-12992145 MS.gene59426:CDS
CCAAGGTCATGGCCGTAGGA+AGG 0.430704 5.4:+12992031 None:intergenic
TAATCCAATCAAGCGGTAAT+GGG 0.432338 5.4:+12989873 None:intergenic
GAAAATAGAGAGCTCTAGCC+TGG 0.437388 5.4:+12990080 None:intergenic
TAATGGGTTGCACTCTAATT+GGG 0.445914 5.4:+12989889 None:intergenic
TGCTTTACCCCGTTTGGGAG+TGG 0.447369 5.4:-12990132 MS.gene59426:CDS
CCTTCCTACGGCCATGACCT+TGG 0.458295 5.4:-12992031 MS.gene59426:CDS
ACCATCTTGTTACTACATAT+AGG 0.461712 5.4:-12990053 MS.gene59426:intron
TGTTGTTCCTGGAAACTTGA+TGG 0.463267 5.4:+12992817 None:intergenic
AAATCAATTAGAGAATTAAT+GGG 0.474603 5.4:-12993254 MS.gene59426:CDS
ACTCTATACTCCAATTGAAC+GGG 0.481498 5.4:-12993226 MS.gene59426:CDS
TTCTTCTTCATCTTAACAGT+TGG 0.485685 5.4:+12989915 None:intergenic
GGTAATCAGTGAGGAATTTG+AGG 0.491280 5.4:+12992007 None:intergenic
CAAGGTCATGGCCGTAGGAA+GGG 0.504349 5.4:+12992032 None:intergenic
AGTCTATGTCCACTCCCAAA+CGG 0.509207 5.4:+12990123 None:intergenic
ACAACTCACCCTTATCCCTT+AGG 0.509490 5.4:+12992136 None:intergenic
GAATTTGAGGGCCAAGGTCA+TGG 0.514355 5.4:+12992020 None:intergenic
GATGCACTCCTAAGGGATAA+GGG 0.514377 5.4:-12992144 MS.gene59426:CDS
CATCAGTGAAACTCTTAGAA+TGG 0.514991 5.4:-12990532 MS.gene59426:CDS
ATCATCGAGTTTATGATCCC+AGG 0.518034 5.4:-12992063 MS.gene59426:CDS
ATGCAGATGGGAGGCTGAGA+GGG 0.520761 5.4:-12989955 MS.gene59426:intron
TGATTTGAGATTTAAATTGT+GGG 0.525173 5.4:+12993156 None:intergenic
CAAGTTTGATCCATGGAGAT+GGG 0.529587 5.4:-12990278 MS.gene59426:CDS
ACAAGTTTGATCCATGGAGA+TGG 0.532406 5.4:-12990279 MS.gene59426:CDS
ACCTATATGTAGTAACAAGA+TGG 0.533105 5.4:+12990052 None:intergenic
ACCCTTACAAGTTTGATCCA+TGG 0.533465 5.4:-12990285 MS.gene59426:CDS
GGAAAGGATGATGAAGATGG+TGG 0.538073 5.4:-12992253 MS.gene59426:CDS
CACTCTATACTCCAATTGAA+CGG 0.541658 5.4:-12993227 MS.gene59426:CDS
CAGAAGACTAATTGCCCAGA+TGG 0.544295 5.4:-12990683 MS.gene59426:CDS
ATGTGGTGGATGCACTCCTA+AGG 0.546513 5.4:-12992152 MS.gene59426:CDS
TGAATGCAGTTTCTTGTGCA+TGG 0.547315 5.4:+12993202 None:intergenic
AGTGGACATAGACTGTGTCC+TGG 0.550707 5.4:-12990114 MS.gene59426:CDS
AGGTAGTTCTACTGAATCAA+AGG 0.553644 5.4:-12993301 MS.gene59426:CDS
GAATTTGAAGTATTCATCAA+AGG 0.554504 5.4:-12992854 MS.gene59426:CDS
GAAAGGATGATGAAGATGGT+GGG 0.563859 5.4:-12992252 MS.gene59426:CDS
TCCATGGATCAAACTTGTAA+GGG 0.564176 5.4:+12990284 None:intergenic
GTGGACATAGACTGTGTCCT+GGG 0.564579 5.4:-12990113 MS.gene59426:CDS
CGGTCCATGTATAACCATCT+GGG 0.565516 5.4:+12990669 None:intergenic
AAAGGATGATGAAGATGGTG+GGG 0.567025 5.4:-12992251 MS.gene59426:CDS
TCATCGAGTTTATGATCCCA+GGG 0.567445 5.4:-12992062 MS.gene59426:CDS
TTCTTATTAGGAGGAGAACA+TGG 0.569672 5.4:-12990717 MS.gene59426:intron
TAGGAAGGGTCTCTTCCCCT+GGG 0.574408 5.4:+12992046 None:intergenic
GATGGTGGGGAGGATAGTTG+AGG 0.577517 5.4:-12992238 MS.gene59426:CDS
GGATGATGAAGATGGTGGGG+AGG 0.579887 5.4:-12992248 MS.gene59426:CDS
ATATAGTTAATGGCATTTGG+AGG 0.581162 5.4:-12990506 MS.gene59426:CDS
CTCAAGTTCAAACCTGATGG+TGG 0.582484 5.4:-12992103 MS.gene59426:CDS
AAGCTCAAGTTCAAACCTGA+TGG 0.583552 5.4:-12992106 MS.gene59426:CDS
TACTTAATTCCTAAAGATTG+GGG 0.585900 5.4:-12990358 MS.gene59426:CDS
AGGGGAAGAGACCCTTCCTA+CGG 0.586360 5.4:-12992043 MS.gene59426:CDS
AGTGAGGAATTTGAGGGCCA+AGG 0.587445 5.4:+12992014 None:intergenic
TAAGGAAAGGATGATGAAGA+TGG 0.588053 5.4:-12992256 MS.gene59426:CDS
ATGTAGTAACAAGATGGTGA+AGG 0.588266 5.4:+12990058 None:intergenic
TAATGCAGAAGATGATGAGA+AGG 0.589946 5.4:-12992190 MS.gene59426:CDS
GTTGTTCCTGGAAACTTGAT+GGG 0.590416 5.4:+12992818 None:intergenic
GTAATCAGTGAGGAATTTGA+GGG 0.598934 5.4:+12992008 None:intergenic
TGAATTACCTCCCATCTCCA+TGG 0.604615 5.4:+12990268 None:intergenic
GATTTGAGATTTAAATTGTG+GGG 0.605113 5.4:+12993157 None:intergenic
GCAGAAGATGATGAGAAGGT+TGG 0.607362 5.4:-12992186 MS.gene59426:CDS
AGGGCCAAGGTCATGGCCGT+AGG 0.609633 5.4:+12992027 None:intergenic
AACAAGTCCAAATCTTCACC+AGG 0.611685 5.4:+12992884 None:intergenic
GGGGTAAAGCAATTGTTACT+AGG 0.613415 5.4:+12990144 None:intergenic
ATTGCCCAGATGGTTATACA+TGG 0.614491 5.4:-12990673 MS.gene59426:CDS
ATAAGTTTGGATAGAGCAAG+AGG 0.619829 5.4:+12991985 None:intergenic
AACAGACCCAGAAGTGAACA+AGG 0.641946 5.4:-12993321 MS.gene59426:CDS
AAATGGTAGTGACATGTAGT+CGG 0.642559 5.4:+12990649 None:intergenic
ATATTGTGCAGGCTAAGGAA+AGG 0.644628 5.4:-12992269 MS.gene59426:intron
TGGTGTAGTAAATGATGTGG+TGG 0.652984 5.4:-12992166 MS.gene59426:CDS
AATGCAGATGGGAGGCTGAG+AGG 0.655729 5.4:-12989956 MS.gene59426:intron
GAGCAAGAGGGTAATCAGTG+AGG 0.668508 5.4:+12991998 None:intergenic
AGCCTGGAAAGTTCTAACCC+AGG 0.669021 5.4:+12990096 None:intergenic
TGTGGTGGATGCACTCCTAA+GGG 0.670398 5.4:-12992151 MS.gene59426:CDS
GATGGTCTAATCCAATCAAG+CGG 0.676932 5.4:+12989866 None:intergenic
GTTTCTGCAATGCAGATGGG+AGG 0.678073 5.4:-12989964 MS.gene59426:intron
TAAGTTTGGATAGAGCAAGA+GGG 0.697383 5.4:+12991986 None:intergenic
GTTTGATCCATGGAGATGGG+AGG 0.700089 5.4:-12990275 MS.gene59426:intron
TCTATGTCCACTCCCAAACG+GGG 0.708133 5.4:+12990125 None:intergenic
GGTTGGTGTAGTAAATGATG+TGG 0.710140 5.4:-12992169 MS.gene59426:CDS
CATCGAGTTTATGATCCCAG+GGG 0.761884 5.4:-12992061 MS.gene59426:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTATTATAATTTATA+AGG + chr5.4:12989909-12989928 None:intergenic 0.0%
!! CAATAATGATAAAAATAATT+AGG + chr5.4:12989940-12989959 None:intergenic 10.0%
!! TTATGAACAAAAAAAATTAT+AGG + chr5.4:12994589-12994608 None:intergenic 10.0%
!!! AATTATATATATTTAGTTTG+TGG + chr5.4:12991829-12991848 None:intergenic 10.0%
!!! ATTATATATATTTAGTTTGT+GGG + chr5.4:12991828-12991847 None:intergenic 10.0%
!! AAAATCAATTAGAGAATTAA+TGG - chr5.4:12991344-12991363 MS.gene59426:intron 15.0%
!! AAATCAATTAGAGAATTAAT+GGG - chr5.4:12991345-12991364 MS.gene59426:intron 15.0%
!! CCAAATAAAAATTTCATATA+TGG - chr5.4:12993840-12993859 MS.gene59426:intron 15.0%
!! TATCATGTAAAATATCAAAA+TGG + chr5.4:12992898-12992917 None:intergenic 15.0%
!! TATTTATAAAACATAGCTAT+GGG + chr5.4:12990551-12990570 None:intergenic 15.0%
!! TCATATAAGAAATGAATATT+TGG + chr5.4:12992831-12992850 None:intergenic 15.0%
!! TTACATAATCTAATATAATG+AGG - chr5.4:12993057-12993076 MS.gene59426:intron 15.0%
!! TTATTTATAAAACATAGCTA+TGG + chr5.4:12990552-12990571 None:intergenic 15.0%
!! TTGAAATTAATTAGTTAGTT+TGG - chr5.4:12992276-12992295 MS.gene59426:intron 15.0%
!!! AATTATTTTAGTAGTTGAAA+TGG - chr5.4:12990851-12990870 MS.gene59426:intron 15.0%
!!! ATCTCACTTATTAAAATTTT+TGG - chr5.4:12990258-12990277 MS.gene59426:intron 15.0%
!!! ATTAATTCTCTAATTGATTT+TGG + chr5.4:12991345-12991364 None:intergenic 15.0%
!!! ATTTTTTTATAAGGTAACAT+TGG + chr5.4:12993993-12994012 None:intergenic 15.0%
!!! CCATATATGAAATTTTTATT+TGG + chr5.4:12993843-12993862 None:intergenic 15.0%
!!! TATTTTATGTGTATGAATTT+AGG + chr5.4:12994182-12994201 None:intergenic 15.0%
!!! TGAAATTAATTAGTTAGTTT+GGG - chr5.4:12992277-12992296 MS.gene59426:intron 15.0%
!!! TTAGTCATTTTTTGTTATTT+AGG - chr5.4:12990932-12990951 MS.gene59426:intron 15.0%
!!! TTTCTTTGTTTTAATTGAAA+GGG + chr5.4:12991159-12991178 None:intergenic 15.0%
!! ATAAAATATAGTTGAGTAGA+TGG - chr5.4:12991957-12991976 MS.gene59426:intron 20.0%
!! ATATAAGCATGAATAGATAT+AGG + chr5.4:12994366-12994385 None:intergenic 20.0%
!! ATCAAAACTTTAACCAAAAT+AGG + chr5.4:12991685-12991704 None:intergenic 20.0%
!! ATCTTAGAAAAATAAAAGCA+TGG + chr5.4:12990731-12990750 None:intergenic 20.0%
!! ATGTAATCACAATACTAATA+AGG - chr5.4:12993281-12993300 MS.gene59426:CDS 20.0%
!! ATTCTGTCATTCAAAAAATA+AGG - chr5.4:12993084-12993103 MS.gene59426:CDS 20.0%
!! ATTTAATCGCAATACTAATA+AGG - chr5.4:12993304-12993323 MS.gene59426:CDS 20.0%
!! GACTAGATAAAAAAAATTCA+AGG + chr5.4:12992189-12992208 None:intergenic 20.0%
!! GGGTTAAAATATTAAAATTG+AGG + chr5.4:12990704-12990723 None:intergenic 20.0%
!! GTAAAAGATGTAGAAATTAA+AGG - chr5.4:12994122-12994141 MS.gene59426:intron 20.0%
!! GTATATATAAATGCAGTTAT+GGG - chr5.4:12991211-12991230 MS.gene59426:intron 20.0%
!! GTATGAGATTAAAAATATGA+GGG + chr5.4:12990672-12990691 None:intergenic 20.0%
!! TACTGTGTAAATAGTTATTA+TGG + chr5.4:12990169-12990188 None:intergenic 20.0%
!! TCAAAAGAGAAAAGATAATT+AGG + chr5.4:12991625-12991644 None:intergenic 20.0%
!! TGTATATATAAATGCAGTTA+TGG - chr5.4:12991210-12991229 MS.gene59426:intron 20.0%
!! TTTAATCGCAATACTAATAA+GGG - chr5.4:12993305-12993324 MS.gene59426:CDS 20.0%
!!! AATTAAGACTAAAGTTTTTG+TGG + chr5.4:12990141-12990160 None:intergenic 20.0%
!!! CATTTTCATCTTTTTTTTTG+TGG - chr5.4:12991867-12991886 MS.gene59426:intron 20.0%
!!! GAATATTTGGACTTTTAAAA+AGG + chr5.4:12992818-12992837 None:intergenic 20.0%
!!! GCTAATCACATTTTTTTATA+AGG + chr5.4:12994002-12994021 None:intergenic 20.0%
!!! GTTTCTTTGTTTTAATTGAA+AGG + chr5.4:12991160-12991179 None:intergenic 20.0%
!!! TCTTAGAAAAATAAAAGCAT+GGG + chr5.4:12990730-12990749 None:intergenic 20.0%
!!! TGATTTGAGATTTAAATTGT+GGG + chr5.4:12991446-12991465 None:intergenic 20.0%
!!! TTCTTTGTTTTAATTGAAAG+GGG + chr5.4:12991158-12991177 None:intergenic 20.0%
!!! TTGAATGTATATTGTTTTGT+TGG + chr5.4:12991514-12991533 None:intergenic 20.0%
! AACACTATACAAATCCTTAA+AGG - chr5.4:12991801-12991820 MS.gene59426:intron 25.0%
! AACTAGTCAAAAAACATTCA+AGG - chr5.4:12992740-12992759 MS.gene59426:intron 25.0%
! AAGAAAGAGATAGCTATTAA+TGG - chr5.4:12993416-12993435 MS.gene59426:intron 25.0%
! AAGATTCACATTTCACTATT+TGG + chr5.4:12990113-12990132 None:intergenic 25.0%
! AATAGTGAAATGTGAATCTT+TGG - chr5.4:12990113-12990132 MS.gene59426:CDS 25.0%
! AGAATGGCAAATATAGTTAA+TGG - chr5.4:12994083-12994102 MS.gene59426:intron 25.0%
! ATAAGTAACATGCTAGATTT+GGG - chr5.4:12992163-12992182 MS.gene59426:CDS 25.0%
! ATCCAAATACAACCTTATTA+GGG + chr5.4:12993497-12993516 None:intergenic 25.0%
! ATTAAAACTGGAGAAAAAAC+TGG - chr5.4:12993444-12993463 MS.gene59426:intron 25.0%
! CAAATATAGTTAATGGCATT+TGG - chr5.4:12994090-12994109 MS.gene59426:intron 25.0%
! CACTAGATTCAAAATGAAAT+TGG + chr5.4:12990498-12990517 None:intergenic 25.0%
! CATTCAAGATGAAGTAAAAA+AGG - chr5.4:12991527-12991546 MS.gene59426:intron 25.0%
! CCATTGGAAATTAATTAAGT+GGG - chr5.4:12993373-12993392 MS.gene59426:CDS 25.0%
! CTTTAATCATATAGATCTCA+TGG + chr5.4:12990830-12990849 None:intergenic 25.0%
! GCGTATTTCATATAACATAT+AGG - chr5.4:12990349-12990368 MS.gene59426:CDS 25.0%
! GGTATGAGATTAAAAATATG+AGG + chr5.4:12990673-12990692 None:intergenic 25.0%
! GTACTTAATTCCTAAAGATT+GGG - chr5.4:12994240-12994259 MS.gene59426:intron 25.0%
! TACTTAATTCCTAAAGATTG+GGG - chr5.4:12994241-12994260 MS.gene59426:intron 25.0%
! TATCCAAATACAACCTTATT+AGG + chr5.4:12993498-12993517 None:intergenic 25.0%
! TCCATTGGAAATTAATTAAG+TGG - chr5.4:12993372-12993391 MS.gene59426:CDS 25.0%
! TTAATCGCAATACTAATAAG+GGG - chr5.4:12993306-12993325 MS.gene59426:CDS 25.0%
! TTCACAAGATAAGTTATCTT+TGG - chr5.4:12994156-12994175 MS.gene59426:intron 25.0%
! TTGTTCAATTCGAAAATTTG+AGG + chr5.4:12990901-12990920 None:intergenic 25.0%
! TTTCAATGAAAGATGATTGT+CGG - chr5.4:12990312-12990331 MS.gene59426:CDS 25.0%
!! AATCATTCTTGTGTCATTAA+GGG - chr5.4:12992672-12992691 MS.gene59426:intron 25.0%
!! CTTAGAAAAATAAAAGCATG+GGG + chr5.4:12990729-12990748 None:intergenic 25.0%
!! CTTATCATAGGTTTCTTTTT+AGG + chr5.4:12992148-12992167 None:intergenic 25.0%
!! GAATTTGAAGTATTCATCAA+AGG - chr5.4:12991745-12991764 MS.gene59426:intron 25.0%
!! GATTTGAGATTTAAATTGTG+GGG + chr5.4:12991445-12991464 None:intergenic 25.0%
!! GTGATTTGAGATTTAAATTG+TGG + chr5.4:12991447-12991466 None:intergenic 25.0%
!! TAAATTTTCGTTCACTTTGA+TGG - chr5.4:12990959-12990978 MS.gene59426:intron 25.0%
!! TAATCATTCTTGTGTCATTA+AGG - chr5.4:12992671-12992690 MS.gene59426:intron 25.0%
!! TAGTAACTTTTTATCTGCAT+TGG + chr5.4:12990640-12990659 None:intergenic 25.0%
!! TTGTTATTAGATGTGAAAGT+AGG + chr5.4:12992246-12992265 None:intergenic 25.0%
!! TTTCTCTTTTGAACTTTTTG+TGG - chr5.4:12991633-12991652 MS.gene59426:intron 25.0%
!!! AAACTCACATTTTGAGTAAA+TGG + chr5.4:12993970-12993989 None:intergenic 25.0%
!!! CTTTGAAGTTATTAATCTTG+TGG - chr5.4:12993804-12993823 MS.gene59426:intron 25.0%
!!! GTGTTTAAGACAAACATTTT+GGG - chr5.4:12991237-12991256 MS.gene59426:intron 25.0%
!!! TAATTGATTTTGGATAAGCA+GGG + chr5.4:12991335-12991354 None:intergenic 25.0%
!!! TGTGTTTAAGACAAACATTT+TGG - chr5.4:12991236-12991255 MS.gene59426:intron 25.0%
!!! TTTTTTATCTAGTCCAACTT+AGG - chr5.4:12992195-12992214 MS.gene59426:CDS 25.0%
!!! TTTTTTTGCATATGAATGCA+GGG - chr5.4:12994218-12994237 MS.gene59426:intron 25.0%
AAGTGAACTTACCATAAGTT+TGG + chr5.4:12992630-12992649 None:intergenic 30.0%
ACCATCTTGTTACTACATAT+AGG - chr5.4:12994546-12994565 MS.gene59426:intron 30.0%
ACCTATATGTAGTAACAAGA+TGG + chr5.4:12994550-12994569 None:intergenic 30.0%
ATATAGTTAATGGCATTTGG+AGG - chr5.4:12994093-12994112 MS.gene59426:intron 30.0%
ATTAAAATTGAGGATGTGTG+TGG + chr5.4:12990694-12990713 None:intergenic 30.0%
CCAAAATAGGAAATGTAATC+TGG + chr5.4:12991672-12991691 None:intergenic 30.0%
CCCACTTAATTAATTTCCAA+TGG + chr5.4:12993376-12993395 None:intergenic 30.0%
GATAAGTAACATGCTAGATT+TGG - chr5.4:12992162-12992181 MS.gene59426:CDS 30.0%
GGTACTTAATTCCTAAAGAT+TGG - chr5.4:12994239-12994258 MS.gene59426:intron 30.0%
TAAGGGTGGATATATACATT+GGG - chr5.4:12992689-12992708 MS.gene59426:intron 30.0%
TAATCGCAATACTAATAAGG+GGG - chr5.4:12993307-12993326 MS.gene59426:CDS 30.0%
TATGTGTGAATATATTGTGC+AGG - chr5.4:12992319-12992338 MS.gene59426:intron 30.0%
TCCAAATACAACCTTATTAG+GGG + chr5.4:12993496-12993515 None:intergenic 30.0%
TGGTTACAAATATGTGCTAA+CGG - chr5.4:12990449-12990468 MS.gene59426:intron 30.0%
TTAAGGGTGGATATATACAT+TGG - chr5.4:12992688-12992707 MS.gene59426:intron 30.0%
TTAATGGCTGTGATTAAAAC+TGG - chr5.4:12993432-12993451 MS.gene59426:intron 30.0%
TTCTTCTTCATCTTAACAGT+TGG + chr5.4:12994687-12994706 None:intergenic 30.0%
TTGTGATTACATCATGTAAG+TGG + chr5.4:12993273-12993292 None:intergenic 30.0%
TTTCAATGCTCGAAAATGTA+AGG + chr5.4:12991091-12991110 None:intergenic 30.0%
! CCAGATTACATTTCCTATTT+TGG - chr5.4:12991669-12991688 MS.gene59426:intron 30.0%
! TCATAAACTCGATGATGTTT+TGG + chr5.4:12992532-12992551 None:intergenic 30.0%
! TCTAGCATGTTACTTATCAT+AGG + chr5.4:12992160-12992179 None:intergenic 30.0%
! TTTTTGGATCCTACTCTATA+GGG - chr5.4:12990274-12990293 MS.gene59426:intron 30.0%
!! ATAGGTTTCTTTTTAGGCTT+CGG + chr5.4:12992142-12992161 None:intergenic 30.0%
!! ATTTTTGGATCCTACTCTAT+AGG - chr5.4:12990273-12990292 MS.gene59426:intron 30.0%
!! CTAATTGATTTTGGATAAGC+AGG + chr5.4:12991336-12991355 None:intergenic 30.0%
!! TCGTGATTTTAACATGTGAT+TGG - chr5.4:12994613-12994632 MS.gene59426:intron 30.0%
!!! CTTTTTTTGCATATGAATGC+AGG - chr5.4:12994217-12994236 MS.gene59426:intron 30.0%
AAAAACTGGAGAAACTTCAC+TGG - chr5.4:12993458-12993477 MS.gene59426:intron 35.0%
AACACAAATCCTGATATTGC+TGG + chr5.4:12993120-12993139 None:intergenic 35.0%
ACTCTATACTCCAATTGAAC+GGG - chr5.4:12991373-12991392 MS.gene59426:intron 35.0%
AGCAGAGTAATATAGACTTG+CGG + chr5.4:12993772-12993791 None:intergenic 35.0%
ATAAGTTTGGATAGAGCAAG+AGG + chr5.4:12992617-12992636 None:intergenic 35.0%
ATACAACCTTATTAGGGGAA+AGG + chr5.4:12993491-12993510 None:intergenic 35.0%
ATAGATCTCTCATGTGACAT+TGG + chr5.4:12990764-12990783 None:intergenic 35.0%
ATATAGTCACCCTATAGAGT+AGG + chr5.4:12990286-12990305 None:intergenic 35.0%
ATATCATAAGTTCCCCCAAA+CGG - chr5.4:12993693-12993712 MS.gene59426:intron 35.0%
ATCTCTTACCTCTGTTCATA+TGG - chr5.4:12994273-12994292 MS.gene59426:intron 35.0%
ATGTAGTAACAAGATGGTGA+AGG + chr5.4:12994544-12994563 None:intergenic 35.0%
CACTCTATACTCCAATTGAA+CGG - chr5.4:12991372-12991391 MS.gene59426:intron 35.0%
CATCAGTGAAACTCTTAGAA+TGG - chr5.4:12994067-12994086 MS.gene59426:intron 35.0%
CATCCATGTTTGTGATAGAA+GGG + chr5.4:12989989-12990008 None:intergenic 35.0%
GGAGAGAATGAAGCTAATAA+TGG - chr5.4:12992382-12992401 MS.gene59426:intron 35.0%
GTAAAACTGACACACACAAA+GGG + chr5.4:12993168-12993187 None:intergenic 35.0%
GTAATCAGTGAGGAATTTGA+GGG + chr5.4:12992594-12992613 None:intergenic 35.0%
GTTCTATGCTTGCAGAAAAT+TGG - chr5.4:12994425-12994444 MS.gene59426:intron 35.0%
TAAGGAAAGGATGATGAAGA+TGG - chr5.4:12992343-12992362 MS.gene59426:intron 35.0%
TAAGTTTGGATAGAGCAAGA+GGG + chr5.4:12992616-12992635 None:intergenic 35.0%
TAATGCAGAAGATGATGAGA+AGG - chr5.4:12992409-12992428 MS.gene59426:intron 35.0%
TATTGACACAAGTCCTTGTA+AGG + chr5.4:12993719-12993738 None:intergenic 35.0%
TCAAACAATGCTTAGCATCT+TGG - chr5.4:12991487-12991506 MS.gene59426:intron 35.0%
TCATCCATGTTTGTGATAGA+AGG + chr5.4:12989990-12990009 None:intergenic 35.0%
TCCATGGATCAAACTTGTAA+GGG + chr5.4:12994318-12994337 None:intergenic 35.0%
TCCCCTAATAAGGTTGTATT+TGG - chr5.4:12993492-12993511 MS.gene59426:intron 35.0%
TCTTCCATCTCCTTTCTAAA+AGG - chr5.4:12994043-12994062 MS.gene59426:intron 35.0%
TCTTGCTCTATCCAAACTTA+TGG - chr5.4:12992616-12992635 MS.gene59426:intron 35.0%
TGAATATATTGTGCAGGCTA+AGG - chr5.4:12992325-12992344 MS.gene59426:intron 35.0%
TGTAAAACTGACACACACAA+AGG + chr5.4:12993169-12993188 None:intergenic 35.0%
TTCTTATTAGGAGGAGAACA+TGG - chr5.4:12993882-12993901 MS.gene59426:intron 35.0%
! AAAAATAAAAGCATGGGGCA+GGG + chr5.4:12990724-12990743 None:intergenic 35.0%
! AAAGTAGGTTGAATCAAGCT+AGG + chr5.4:12992231-12992250 None:intergenic 35.0%
! AAATGGTAGTGACATGTAGT+CGG + chr5.4:12993953-12993972 None:intergenic 35.0%
! AGGTAGTTCTACTGAATCAA+AGG - chr5.4:12991298-12991317 MS.gene59426:intron 35.0%
! GATTTGTATAGTGTTGTTCC+TGG + chr5.4:12991796-12991815 None:intergenic 35.0%
!! ATGACCTTTTAGAAAGGAGA+TGG + chr5.4:12994050-12994069 None:intergenic 35.0%
!! GTTAAAGTTTTGATGAGCGT+TGG - chr5.4:12991691-12991710 MS.gene59426:intron 35.0%
!! TAATGGGTTGCACTCTAATT+GGG + chr5.4:12994713-12994732 None:intergenic 35.0%
!! TATATACATTGGGTTGAGCT+AGG - chr5.4:12992699-12992718 MS.gene59426:intron 35.0%
!! TCACTGATGACCTTTTAGAA+AGG + chr5.4:12994056-12994075 None:intergenic 35.0%
!! TTTAGTTTGTGGGACCTTTA+AGG + chr5.4:12991818-12991837 None:intergenic 35.0%
!! TTTTGAGTCCATATGAACAG+AGG + chr5.4:12994284-12994303 None:intergenic 35.0%
AAAGGATGATGAAGATGGTG+GGG - chr5.4:12992348-12992367 MS.gene59426:intron 40.0%
AACAAGTCCAAATCTTCACC+AGG + chr5.4:12991718-12991737 None:intergenic 40.0%
AACAATTGCTTTACCCCGTT+TGG - chr5.4:12994461-12994480 MS.gene59426:intron 40.0%
AAGCTCAAGTTCAAACCTGA+TGG - chr5.4:12992493-12992512 MS.gene59426:intron 40.0%
ACAAGTTTGATCCATGGAGA+TGG - chr5.4:12994320-12994339 MS.gene59426:intron 40.0%
ACAATTGCTTTACCCCGTTT+GGG - chr5.4:12994462-12994481 MS.gene59426:intron 40.0%
ACCCTTACAAGTTTGATCCA+TGG - chr5.4:12994314-12994333 MS.gene59426:intron 40.0%
AGAACTACCTTGTTCACTTC+TGG + chr5.4:12991288-12991307 None:intergenic 40.0%
ATATTGTGCAGGCTAAGGAA+AGG - chr5.4:12992330-12992349 MS.gene59426:intron 40.0%
ATCATCGAGTTTATGATCCC+AGG - chr5.4:12992536-12992555 MS.gene59426:intron 40.0%
ATGGACAAGATTTCACTGCA+TGG + chr5.4:12993357-12993376 None:intergenic 40.0%
ATTGCCCAGATGGTTATACA+TGG - chr5.4:12993926-12993945 MS.gene59426:intron 40.0%
CAAACTGCAATGAAACAGGA+AGG + chr5.4:12990583-12990602 None:intergenic 40.0%
CAAGTTTGATCCATGGAGAT+GGG - chr5.4:12994321-12994340 MS.gene59426:intron 40.0%
CCTCGTGGAGAAATTATGAA+AGG + chr5.4:12990071-12990090 None:intergenic 40.0%
CCTTTCATAATTTCTCCACG+AGG - chr5.4:12990068-12990087 MS.gene59426:CDS 40.0%
CGGCGTGAATGCATAAAATT+TGG - chr5.4:12990469-12990488 MS.gene59426:intron 40.0%
CTAACTCAACCAGCAATATC+AGG - chr5.4:12993108-12993127 MS.gene59426:CDS 40.0%
CTCCATGGATCAAACTTGTA+AGG + chr5.4:12994319-12994338 None:intergenic 40.0%
CTGAAACGATCTCGATTCAA+TGG - chr5.4:12990429-12990448 MS.gene59426:intron 40.0%
GAAAGGATGATGAAGATGGT+GGG - chr5.4:12992347-12992366 MS.gene59426:intron 40.0%
GAACTACCTTGTTCACTTCT+GGG + chr5.4:12991287-12991306 None:intergenic 40.0%
GATCCCTTCTATCACAAACA+TGG - chr5.4:12989983-12990002 MS.gene59426:intron 40.0%
GCAATACTAATAAGGGGGTT+TGG - chr5.4:12993312-12993331 MS.gene59426:CDS 40.0%
GGGGAACTTATGATATGTTC+AGG + chr5.4:12993689-12993708 None:intergenic 40.0%
GGGGTAAAGCAATTGTTACT+AGG + chr5.4:12994458-12994477 None:intergenic 40.0%
GGTAATCAGTGAGGAATTTG+AGG + chr5.4:12992595-12992614 None:intergenic 40.0%
GTTGTTCCTGGAAACTTGAT+GGG + chr5.4:12991784-12991803 None:intergenic 40.0%
GTTTGCACATCTTCTCTCAA+TGG - chr5.4:12990598-12990617 MS.gene59426:intron 40.0%
TCATCGAGTTTATGATCCCA+GGG - chr5.4:12992537-12992556 MS.gene59426:intron 40.0%
TGAATCTAGTGATCGCAAAG+TGG - chr5.4:12990507-12990526 MS.gene59426:CDS 40.0%
TGAATGCAGTTTCTTGTGCA+TGG + chr5.4:12991400-12991419 None:intergenic 40.0%
TGCAGTGAAATCTTGTCCAT+TGG - chr5.4:12993357-12993376 MS.gene59426:CDS 40.0%
TGGTGTAGTAAATGATGTGG+TGG - chr5.4:12992433-12992452 MS.gene59426:intron 40.0%
TGTGCAAACTGCAATGAAAC+AGG + chr5.4:12990587-12990606 None:intergenic 40.0%
TGTTGTTCCTGGAAACTTGA+TGG + chr5.4:12991785-12991804 None:intergenic 40.0%
TTGGTTTCTGCAATGCAGAT+GGG - chr5.4:12994632-12994651 MS.gene59426:intron 40.0%
! AGGTTTTGCAAGACCTAAGT+TGG + chr5.4:12992211-12992230 None:intergenic 40.0%
! ATTGGTTTCTGCAATGCAGA+TGG - chr5.4:12994631-12994650 MS.gene59426:intron 40.0%
! CATTCTTGTGTCATTAAGGG+TGG - chr5.4:12992675-12992694 MS.gene59426:intron 40.0%
! GAAAAATAAAAGCATGGGGC+AGG + chr5.4:12990725-12990744 None:intergenic 40.0%
! GGTTGGTGTAGTAAATGATG+TGG - chr5.4:12992430-12992449 MS.gene59426:intron 40.0%
! TCCTAAAGATTGGGGTGTTA+TGG - chr5.4:12994249-12994268 MS.gene59426:intron 40.0%
!! GTAATGGGTTGCACTCTAAT+TGG + chr5.4:12994714-12994733 None:intergenic 40.0%
AACAGACCCAGAAGTGAACA+AGG - chr5.4:12991278-12991297 MS.gene59426:intron 45.0%
AAGTCCTTGTAAGGCCGTTT+GGG + chr5.4:12993710-12993729 None:intergenic 45.0%
ACAACTCACCCTTATCCCTT+AGG + chr5.4:12992466-12992485 None:intergenic 45.0%
AGTCTATGTCCACTCCCAAA+CGG + chr5.4:12994479-12994498 None:intergenic 45.0%
CAGAAGACTAATTGCCCAGA+TGG - chr5.4:12993916-12993935 MS.gene59426:intron 45.0%
CATCGAGTTTATGATCCCAG+GGG - chr5.4:12992538-12992557 MS.gene59426:intron 45.0%
CATCTTCTCTCAATGGAGTG+TGG - chr5.4:12990605-12990624 MS.gene59426:intron 45.0%
CGGTCCATGTATAACCATCT+GGG + chr5.4:12993933-12993952 None:intergenic 45.0%
CTCAAGTTCAAACCTGATGG+TGG - chr5.4:12992496-12992515 MS.gene59426:intron 45.0%
GAGGATCCTTTCCCCTAATA+AGG - chr5.4:12993482-12993501 MS.gene59426:intron 45.0%
GATGCACTCCTAAGGGATAA+GGG - chr5.4:12992455-12992474 MS.gene59426:intron 45.0%
GCAGAAGATGATGAGAAGGT+TGG - chr5.4:12992413-12992432 MS.gene59426:intron 45.0%
GCCATAACACCCCAATCTTT+AGG + chr5.4:12994253-12994272 None:intergenic 45.0%
GGAAAGGATGATGAAGATGG+TGG - chr5.4:12992346-12992365 MS.gene59426:intron 45.0%
GGCTAATCATTTCCACCATC+AGG + chr5.4:12992511-12992530 None:intergenic 45.0%
TAATTTCTCCACGAGGCCAA+TGG - chr5.4:12990075-12990094 MS.gene59426:CDS 45.0%
TCGGTCCATGTATAACCATC+TGG + chr5.4:12993934-12993953 None:intergenic 45.0%
TGAATTACCTCCCATCTCCA+TGG + chr5.4:12994334-12994353 None:intergenic 45.0%
TGCTTACCCATCAAGTTTCC+AGG - chr5.4:12991775-12991794 MS.gene59426:intron 45.0%
! GAAAATAGAGAGCTCTAGCC+TGG + chr5.4:12994522-12994541 None:intergenic 45.0%
AGTCCTTGTAAGGCCGTTTG+GGG + chr5.4:12993709-12993728 None:intergenic 50.0%
AGTGAGGAATTTGAGGGCCA+AGG + chr5.4:12992588-12992607 None:intergenic 50.0%
AGTGGACATAGACTGTGTCC+TGG - chr5.4:12994485-12994504 MS.gene59426:intron 50.0%
CAAGTCCTTGTAAGGCCGTT+TGG + chr5.4:12993711-12993730 None:intergenic 50.0%
CGTTGGTCCTGGTGAAGATT+TGG - chr5.4:12991708-12991727 MS.gene59426:intron 50.0%
CTGGAGAAACTTCACTGGAG+AGG - chr5.4:12993463-12993482 MS.gene59426:intron 50.0%
GAATTTGAGGGCCAAGGTCA+TGG + chr5.4:12992582-12992601 None:intergenic 50.0%
GAGCAAGAGGGTAATCAGTG+AGG + chr5.4:12992604-12992623 None:intergenic 50.0%
GATCGCAAAGTGGCTGGAAA+GGG - chr5.4:12990517-12990536 MS.gene59426:CDS 50.0%
GCTAGAGTAGACTGTGTGGA+AGG - chr5.4:12990789-12990808 MS.gene59426:intron 50.0%
GGATGCACTCCTAAGGGATA+AGG - chr5.4:12992454-12992473 MS.gene59426:intron 50.0%
GTCTATGTCCACTCCCAAAC+GGG + chr5.4:12994478-12994497 None:intergenic 50.0%
GTGGACATAGACTGTGTCCT+GGG - chr5.4:12994486-12994505 MS.gene59426:intron 50.0%
GTTTCTGCAATGCAGATGGG+AGG - chr5.4:12994635-12994654 MS.gene59426:intron 50.0%
GTTTGATCCATGGAGATGGG+AGG - chr5.4:12994324-12994343 MS.gene59426:intron 50.0%
TCCACACAGTCTACTCTAGC+TGG + chr5.4:12990789-12990808 None:intergenic 50.0%
TCCAGCTAGAGTAGACTGTG+TGG - chr5.4:12990785-12990804 MS.gene59426:intron 50.0%
TCTAGTGATCGCAAAGTGGC+TGG - chr5.4:12990511-12990530 MS.gene59426:CDS 50.0%
TCTATGTCCACTCCCAAACG+GGG + chr5.4:12994477-12994496 None:intergenic 50.0%
TGATCGCAAAGTGGCTGGAA+AGG - chr5.4:12990516-12990535 MS.gene59426:CDS 50.0%
TGTGCATGGTCCCGTTCAAT+TGG + chr5.4:12991386-12991405 None:intergenic 50.0%
TTGGTGAGCATGCATGCCAT+TGG + chr5.4:12990094-12990113 None:intergenic 50.0%
! AGCCTGGAAAGTTCTAACCC+AGG + chr5.4:12994506-12994525 None:intergenic 50.0%
! GTCCTGGGTTAGAACTTTCC+AGG - chr5.4:12994501-12994520 MS.gene59426:intron 50.0%
!! ATGTGGTGGATGCACTCCTA+AGG - chr5.4:12992447-12992466 MS.gene59426:intron 50.0%
!! TGTGGTGGATGCACTCCTAA+GGG - chr5.4:12992448-12992467 MS.gene59426:intron 50.0%
!!! GTTTTGATGAGCGTTGGTCC+TGG - chr5.4:12991697-12991716 MS.gene59426:intron 50.0%
AATGCAGATGGGAGGCTGAG+AGG - chr5.4:12994643-12994662 MS.gene59426:intron 55.0%
AGGGGAAGAGACCCTTCCTA+CGG - chr5.4:12992556-12992575 MS.gene59426:intron 55.0%
ATGCAGATGGGAGGCTGAGA+GGG - chr5.4:12994644-12994663 MS.gene59426:intron 55.0%
CAAGGTCATGGCCGTAGGAA+GGG + chr5.4:12992570-12992589 None:intergenic 55.0%
GTCCTTGTAAGGCCGTTTGG+GGG + chr5.4:12993708-12993727 None:intergenic 55.0%
TAGGAAGGGTCTCTTCCCCT+GGG + chr5.4:12992556-12992575 None:intergenic 55.0%
TCACTGCATGGTGCAGTCAC+TGG + chr5.4:12993345-12993364 None:intergenic 55.0%
TGCATGGTGCAGTCACTGGA+GGG + chr5.4:12993341-12993360 None:intergenic 55.0%
TGCTTTACCCCGTTTGGGAG+TGG - chr5.4:12994467-12994486 MS.gene59426:intron 55.0%
TTCCCCCAAACGGCCTTACA+AGG - chr5.4:12993703-12993722 MS.gene59426:intron 55.0%
!! GATGGTGGGGAGGATAGTTG+AGG - chr5.4:12992361-12992380 MS.gene59426:intron 55.0%
!! GGATGATGAAGATGGTGGGG+AGG - chr5.4:12992351-12992370 MS.gene59426:intron 55.0%
CCAAGGTCATGGCCGTAGGA+AGG + chr5.4:12992571-12992590 None:intergenic 60.0%
CCTTCCTACGGCCATGACCT+TGG - chr5.4:12992568-12992587 MS.gene59426:intron 60.0%
CTGCATGGTGCAGTCACTGG+AGG + chr5.4:12993342-12993361 None:intergenic 60.0%
GCATGGTGCAGTCACTGGAG+GGG + chr5.4:12993340-12993359 None:intergenic 60.0%
GTAGGAAGGGTCTCTTCCCC+TGG + chr5.4:12992557-12992576 None:intergenic 60.0%
! CATGCATGCCATTGGCCTCG+TGG + chr5.4:12990086-12990105 None:intergenic 60.0%
AGGGCCAAGGTCATGGCCGT+AGG + chr5.4:12992575-12992594 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 12989881 12994740 12989881 ID=MS.gene59426
chr5.4 mRNA 12989881 12994740 12989881 ID=MS.gene59426.t1;Parent=MS.gene59426
chr5.4 exon 12994721 12994740 12994721 ID=MS.gene59426.t1.exon1;Parent=MS.gene59426.t1
chr5.4 CDS 12994721 12994740 12994721 ID=cds.MS.gene59426.t1;Parent=MS.gene59426.t1
chr5.4 exon 12993073 12993394 12993073 ID=MS.gene59426.t1.exon2;Parent=MS.gene59426.t1
chr5.4 CDS 12993073 12993394 12993073 ID=cds.MS.gene59426.t1;Parent=MS.gene59426.t1
chr5.4 exon 12992799 12992948 12992799 ID=MS.gene59426.t1.exon3;Parent=MS.gene59426.t1
chr5.4 CDS 12992799 12992948 12992799 ID=cds.MS.gene59426.t1;Parent=MS.gene59426.t1
chr5.4 exon 12991984 12992280 12991984 ID=MS.gene59426.t1.exon4;Parent=MS.gene59426.t1
chr5.4 CDS 12991984 12992280 12991984 ID=cds.MS.gene59426.t1;Parent=MS.gene59426.t1
chr5.4 exon 12990640 12990729 12990640 ID=MS.gene59426.t1.exon5;Parent=MS.gene59426.t1
chr5.4 CDS 12990640 12990729 12990640 ID=cds.MS.gene59426.t1;Parent=MS.gene59426.t1
chr5.4 exon 12990478 12990556 12990478 ID=MS.gene59426.t1.exon6;Parent=MS.gene59426.t1
chr5.4 CDS 12990478 12990556 12990478 ID=cds.MS.gene59426.t1;Parent=MS.gene59426.t1
chr5.4 exon 12990276 12990382 12990276 ID=MS.gene59426.t1.exon7;Parent=MS.gene59426.t1
chr5.4 CDS 12990276 12990382 12990276 ID=cds.MS.gene59426.t1;Parent=MS.gene59426.t1
chr5.4 exon 12990054 12990181 12990054 ID=MS.gene59426.t1.exon8;Parent=MS.gene59426.t1
chr5.4 CDS 12990054 12990181 12990054 ID=cds.MS.gene59426.t1;Parent=MS.gene59426.t1
chr5.4 exon 12989881 12989971 12989881 ID=MS.gene59426.t1.exon9;Parent=MS.gene59426.t1
chr5.4 CDS 12989881 12989971 12989881 ID=cds.MS.gene59426.t1;Parent=MS.gene59426.t1
Gene Sequence

>MS.gene59426

ATGGAAAAACGCAAGTCTATGTAAGCCTTATAAATTATAATAATTTATTTAATTATCCTAATTATTTTTATCATTATTGTTAATTGCTATATTATTTTATTTGATCCCTTCTATCACAAACATGGATGATATGATTTTGATTTATGATTCTTAATTGTAGTATTTTGCTTTTTGCATATTCTCATATCCTTTCATAATTTCTCCACGAGGCCAATGGCATGCATGCTCACCAAATAGTGAAATGTGAATCTTTGGAACCACAAAAACTTTAGTCTTAATTAAGAACCATAATAACTATTTACACAGTAGAACTTATATAAATTTTAATCGCTTACGCATTTATATATTTTTATACAAGTTTTTATGATATAATTTTGATCTCACTTATTAAAATTTTTGGATCCTACTCTATAGGGTGACTATATTTAAACTTTCAATGAAAGATGATTGTCGGCAGTCAAAATTTTTGCGTATTTCATATAACATATAGGTCTAGATGTCAAGTATACGATTTTTCTTTTAAAAGATATTAAAATTTGTATTATAATCTGAAACGATCTCGATTCAATGGTTACAAATATGTGCTAACGGCGTGAATGCATAAAATTTGGAATCCAATTTCATTTTGAATCTAGTGATCGCAAAGTGGCTGGAAAGGGTACTTCTACCCATAGCTATGTTTTATAAATAATCAGCTAGCCTTCCTGTTTCATTGCAGTTTGCACATCTTCTCTCAATGGAGTGTGGCTAATTAAACCAATGCAGATAAAAAGTTACTATAAACTATACCCTCATATTTTTAATCTCATACCACACACATCCTCAATTTTAATATTTTAACCCTGCCCCATGCTTTTATTTTTCTAAGATTAAGATTTTGCCAATGTCACATGAGAGATCTATTTCCAGCTAGAGTAGACTGTGTGGAAGGAAATAATAATAGTATCCATGAGATCTATATGATTAAAGCAATTATTTTAGTAGTTGAAATGGTAGAAGTAGATGAGTAATTTAGTACCTCAAATTTTCGAATTGAACAATGTTAATCAATTTAGTCATTTTTTGTTATTTAGGATCATAAATTTTCGTTCACTTTGATGGATGTTTATTAAAAAGATATTTTAATTGAGAAATTAATTCGATTGATATTCTCTAGTTTAAGATGCTAATTTGTTATTTCGTAAATTTGAAAGACTAAATCGCTCGACCTTACATTTTCGAGCATTGAAATGTTGATTAACTCAACTACATACTCATATATAATTAATTAATATCCCCTTTCAATTAAAACAAAGAAACGTGTTTTTATTTACATTTTGTATATATTTTTGTATATATAAATGCAGTTATGGGAATGTGTTTAAGACAAACATTTTGGGAAGCAATGTGATAATTTCAACAGACCCAGAAGTGAACAAGGTAGTTCTACTGAATCAAAGGAACATTTTTGTCCCTGCTTATCCAAAATCAATTAGAGAATTAATGGGAGAACACTCTATACTCCAATTGAACGGGACCATGCACAAGAAACTGCATTCACTCATTGCAGTGTTTCTTAAGTCCCCACAATTTAAATCTCAAATCACTAGAGATATTGAACACTCTGTCAAACAATGCTTAGCATCTTGGACCAACAAAACAATATACATTCAAGATGAAGTAAAAAAGGTCTCTCTTTTTTTATTTAATAATAATGATATTTTCTTTCACTATTTTTTTTATTTGAATACATTTATTTTCTCCTAATTATCTTTTCTCTTTTGAACTTTTTGTGGATGTGCATATATTCCAGATTACATTTCCTATTTTGGTTAAAGTTTTGATGAGCGTTGGTCCTGGTGAAGATTTGGACTTGTTGAAAAGAGAATTTGAAGTATTCATCAAAGGCTTGATTTGCTTACCCATCAAGTTTCCAGGAACAACACTATACAAATCCTTAAAGGTCCCACAAACTAAATATATATAATTAATCTGATTTGTGTTAAACATTTTCATCTTTTTTTTTGTGGAAAACATTTTCATTAATTCAAGTATATTAGCTTACATTATATTTTTGACATATTTAAATGTATTGTTATAAAATATAGTTGAGTAGATGGTCATATAAAGTCATAGTCTCTAAATATGATGTTAAATCACAAAATATAATTAATTTCATTGACATATTAACTCGTTATTCTATTTAAACATGTCGAATTACTTATTTGAATATATTAATATAAAATAGACTTTTAATTAAGCTTGCAAGTCAGAAAGAACCGAAGCCTAAAAAGAAACCTATGATAAGTAACATGCTAGATTTGGGCCTTGAATTTTTTTTATCTAGTCCAACTTAGGTCTTGCAAAACCTAGCTTGATTCAACCTACTTTCACATCTAATAACAATAATATGAAGTTGAAATTAATTAGTTAGTTTGGGATTAAAGTGCGTAACTAATTATGTGTGAATATATTGTGCAGGCTAAGGAAAGGATGATGAAGATGGTGGGGAGGATAGTTGAGGAGAGAATGAAGCTAATAATGGATAATAATGCAGAAGATGATGAGAAGGTTGGTGTAGTAAATGATGTGGTGGATGCACTCCTAAGGGATAAGGGTGAGTTGTCTCAATCAAGCTCAAGTTCAAACCTGATGGTGGAAATGATTAGCCAAAACATCATCGAGTTTATGATCCCAGGGGAAGAGACCCTTCCTACGGCCATGACCTTGGCCCTCAAATTCCTCACTGATTACCCTCTTGCTCTATCCAAACTTATGGTAAGTTCACTTAATTGTGTTATGTACTATTTCTAATCATTCTTGTGTCATTAAGGGTGGATATATACATTGGGTTGAGCTAGGTTTTGTAAGTTTAAGTATAACTAGTCAAAAAACATTCAAGGCATAAATCTAACTTCTTATGTGTCATAAGCTTATTGTTAGACTTAAGCGTGACCTTTTTAAAAGTCCAAATATTCATTTCTTATATGACGCATATTTAAATAGACTAATGAATGTATTAATGAGATCATGCACCATTTTGATATTTTACATGATATTTCATAGAATCTAACTTTATATGATATCATATTTTAATTTTATTTTAAATAATACATTTAAATATGCAAAATAAATAAATAAATGTAGTCTAATATGCTTAAATTATTGAACATATCAAATTTATAATTTAAAATAAATTACATAATCTAATATAATGAGGTCTAATTCTGTCATTCAAAAAATAAGGTCTAACTCAACCAGCAATATCAGGATTTGTGTTTACTCAAATTTGAACACAATATTCTCCCTTTGTGTGTGTCAGTTTTACATACAAAAAAAAAAAGTTTGTTTCTTTTGATAACAGAGAATTTTGCTCGATATTTCTACAACATTAGTGCAATGACATATCTCCACTTACATGATGTAATCACAATACTAATAAGGATTTAATCGCAATACTAATAAGGGGGTTTGGATCCCCTCCAGTGACTGCACCATGCAGTGAAATCTTGTCCATTGGAAATTAATTAAGTGGGAGTATTTAATGTTTAAAAAGAAGAAAGAGATAGCTATTAATGGCTGTGATTAAAACTGGAGAAAAAACTGGAGAAACTTCACTGGAGAGGATCCTTTCCCCTAATAAGGTTGTATTTGGATAAACAACTTAATTTAAAACTTATAGCATAAACGTTTATTATAATAAGCACTTGCTTATAAGATATTTCTATACAAAAGATAAAATAAAGTTAAATTATTTTCATATAAGCTTTAAATTATTTTTATAAGTTATCTTAGAGAGTTTATGAAGATGAGCTAAAATCAAACTCCTGAACATATCATAAGTTCCCCCAAACGGCCTTACAAGGACTTGTGTCAATAAATAAGCTTAAAGAAATCAATTCAAACATTCCGCAAGTCTATATTACTCTGCTAAGCAATGAAAACTTTGAAGTTATTAATCTTGTGGACTAAATATACAACCAAATAAAAATTTCATATATGGTTTATCTGATTCATTTATTTTCTTATTAGGAGGAGAACATGGAATTGAAGAAGCAGAAGACTAATTGCCCAGATGGTTATACATGGACCGACTACATGTCACTACCATTTACTCAAAATGTGAGTTTCCAATGTTACCTTATAAAAAAATGTGATTAGCATTATTATGTTCATTGATTTCTCTTCCATCTCCTTTCTAAAAGGTCATCAGTGAAACTCTTAGAATGGCAAATATAGTTAATGGCATTTGGAGGAGAGCAGTAAAAGATGTAGAAATTAAAGGTAGTGTAGTTATTCACAAGATAAGTTATCTTTGGCCTAAATTCATACACATAAAATACTAATGCAATTTTAACTTTTTTTGCATATGAATGCAGGGTACTTAATTCCTAAAGATTGGGGTGTTATGGCATCTCTTACCTCTGTTCATATGGACTCAAAAAACTATGAAAACCCTTACAAGTTTGATCCATGGAGATGGGAGGTAATTCAGCTTCTAAACCTATATCTATTCATGCTTATATAAAGATCATATACTTACATGAAGCAATTATATATACAATGTTCTATGCTTGCAGAAAATTGGAGTTGTGCCTAGTAACAATTGCTTTACCCCGTTTGGGAGTGGACATAGACTGTGTCCTGGGTTAGAACTTTCCAGGCTAGAGCTCTCTATTTTCCTTCACCATCTTGTTACTACATATAGGTAAAATATAATAGCTAACCTATAATTTTTTTTGTTCATAATGTTTCGTGATTTTAACATGTGATTGGTTTCTGCAATGCAGATGGGAGGCTGAGAGGGATGAAATAGTATACTTTCCAACTGTTAAGATGAAGAAGAAGCTCCCAATTAGAGTGCAACCCATTACCGCTTGA
Protein sequence

>MS.gene59426.t1

MEKRKSIYGNVFKTNILGSNVIISTDPEVNKVVLLNQRNIFVPAYPKSIRELMGEHSILQLNGTMHKKLHSLIAVFLKSPQFKSQITRDIEHSVKQCLASWTNKTIYIQDEVKKITFPILVKVLMSVGPGEDLDLLKREFEVFIKGLICLPIKFPGTTLYKSLKAKERMMKMVGRIVEERMKLIMDNNAEDDEKVGVVNDVVDALLRDKGELSQSSSSSNLMVEMISQNIIEFMIPGEETLPTAMTLALKFLTDYPLALSKLMEENMELKKQKTNCPDGYTWTDYMSLPFTQNVISETLRMANIVNGIWRRAVKDVEIKGYLIPKDWGVMASLTSVHMDSKNYENPYKFDPWRWEKIGVVPSNNCFTPFGSGHRLCPGLELSRLELSIFLHHLVTTYRWEAERDEIVYFPTVKMKKKLPIRVQPITA