Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59750.t1 | KEH19190.1 | 75.3 | 959 | 221 | 2 | 1 | 943 | 159 | 1117 | 0.00E+00 | 1338.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59750.t1 | Q40392 | 33.5 | 778 | 430 | 16 | 1 | 709 | 159 | 918 | 2.7e-108 | 394.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59750.t1 | A0A072U068 | 75.3 | 959 | 221 | 2 | 1 | 943 | 159 | 1117 | 0.0e+00 | 1338.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056050 | MS.gene59750 | 0.803745 | 3.01E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 194 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATCTTTCCCAATATTTC+TGG | 0.095149 | 8.4:-57120914 | None:intergenic |
| TCATGACTCAGTTGGATATT+TGG | 0.126418 | 8.4:+57120775 | MS.gene59750:CDS |
| TAAAATTGAAAGCTTATTTC+TGG | 0.130249 | 8.4:+57120258 | MS.gene59750:CDS |
| TCTTTCCAAAAGGTCTTATT+TGG | 0.158309 | 8.4:+57121209 | MS.gene59750:CDS |
| AACATTGATAAATGCGAATT+TGG | 0.161658 | 8.4:+57122409 | MS.gene59750:CDS |
| GTGAAAGATTTGGACCTTTC+AGG | 0.162424 | 8.4:+57121241 | MS.gene59750:CDS |
| TATTTGGCAACCACTCTTAT+TGG | 0.175573 | 8.4:-57122320 | None:intergenic |
| AGAGAAAATTCAGTGAAATT+TGG | 0.193366 | 8.4:+57119215 | MS.gene59750:CDS |
| TACTTCTTTACCGTCATCTT+TGG | 0.218791 | 8.4:-57120287 | None:intergenic |
| ATCAGTTAGTCTACAATTTC+AGG | 0.220577 | 8.4:+57122162 | MS.gene59750:CDS |
| TCTTTCACACTGCTCAATTC+TGG | 0.228830 | 8.4:+57120883 | MS.gene59750:CDS |
| TCTGATGATGTAGTCCAATT+AGG | 0.236852 | 8.4:+57119092 | MS.gene59750:CDS |
| TTCCAACACTCTTAAACTAT+TGG | 0.238215 | 8.4:-57120401 | None:intergenic |
| CTGTTAAAATTTGAAGATAA+TGG | 0.239378 | 8.4:+57122221 | MS.gene59750:CDS |
| TTAAGGTTTATAATTGAAAA+TGG | 0.244643 | 8.4:-57120983 | None:intergenic |
| TACATGGATCCCGCTATATT+TGG | 0.258903 | 8.4:-57122336 | None:intergenic |
| CATGACTCAGTTGGATATTT+GGG | 0.261097 | 8.4:+57120776 | MS.gene59750:CDS |
| GGTCATAAATTTGACAGTTC+TGG | 0.261398 | 8.4:+57120652 | MS.gene59750:CDS |
| TTGAGTATGCCAAGTTTCTT+TGG | 0.261452 | 8.4:-57120466 | None:intergenic |
| GGAGAGTTTCCCAGAAATAT+TGG | 0.264565 | 8.4:+57120904 | MS.gene59750:CDS |
| CATGCTGCCTGAACTTTGTT+TGG | 0.270796 | 8.4:+57121066 | MS.gene59750:CDS |
| GGCAGCATGACAATGCTATT+TGG | 0.274672 | 8.4:-57121052 | None:intergenic |
| CCATTCCATATATCCCTAAT+TGG | 0.280853 | 8.4:-57119106 | None:intergenic |
| GTGAATCTTCAAGAGATTAT+AGG | 0.284736 | 8.4:+57121469 | MS.gene59750:CDS |
| ACTTCTTTACCGTCATCTTT+GGG | 0.292591 | 8.4:-57120286 | None:intergenic |
| GCAAACCAAATAAGACCTTT+TGG | 0.292682 | 8.4:-57121214 | None:intergenic |
| AATCTCTTGATTTGCTTTGT+TGG | 0.299103 | 8.4:+57119522 | MS.gene59750:CDS |
| GCAGAAGCTCAAACAGAAAA+AGG | 0.299440 | 8.4:+57119328 | MS.gene59750:CDS |
| GAACAAAGTAATCTCACTTC+TGG | 0.302171 | 8.4:+57119061 | MS.gene59750:CDS |
| CTTTCTGAGGAGCCTTAATC+TGG | 0.309176 | 8.4:+57121306 | MS.gene59750:CDS |
| ATATCTGTGTGTCTTGTTAT+TGG | 0.312101 | 8.4:+57122062 | MS.gene59750:CDS |
| CCAACGAATCAAAGCTTATC+TGG | 0.321465 | 8.4:-57119736 | None:intergenic |
| AGCTTATCTGGAGTATTGTT+TGG | 0.323950 | 8.4:-57119724 | None:intergenic |
| TGTTAAAATTTGAAGATAAT+GGG | 0.327677 | 8.4:+57122222 | MS.gene59750:CDS |
| TACACAATACTTGCCTGAAT+TGG | 0.336586 | 8.4:-57120520 | None:intergenic |
| GCCTGCAATCATCCAGATTA+AGG | 0.341871 | 8.4:-57121318 | None:intergenic |
| GTAGTCCAATTAGGGATATA+TGG | 0.343192 | 8.4:+57119101 | MS.gene59750:CDS |
| GGAAGACGTGGAAGACATAC+TGG | 0.346756 | 8.4:+57119817 | MS.gene59750:CDS |
| TATCTTCCAATCCACTTGTT+TGG | 0.348564 | 8.4:-57122364 | None:intergenic |
| CACTTGTTTGGTTAAATACA+TGG | 0.351682 | 8.4:-57122352 | None:intergenic |
| GCCTTAATCTGGATGATTGC+AGG | 0.352433 | 8.4:+57121317 | MS.gene59750:CDS |
| CCCAGAAATATTGGGAAAGA+TGG | 0.360925 | 8.4:+57120913 | MS.gene59750:CDS |
| TTTCTTCAATGGACGTGAAC+TGG | 0.361199 | 8.4:+57119796 | MS.gene59750:CDS |
| TCCAACACTCTTAAACTATT+GGG | 0.361804 | 8.4:-57120400 | None:intergenic |
| GTAATCTCACTTCTGGATCT+TGG | 0.363998 | 8.4:+57119068 | MS.gene59750:CDS |
| GTTTGCCAATGTGAAAGATT+TGG | 0.366802 | 8.4:+57121231 | MS.gene59750:CDS |
| TATCTGTGTGTCTTGTTATT+GGG | 0.366925 | 8.4:+57122063 | MS.gene59750:CDS |
| GATATTGCTTGTTTCTTCAA+TGG | 0.367306 | 8.4:+57119785 | MS.gene59750:CDS |
| GCAGTAGGCTCCTCCTTGTT+TGG | 0.367855 | 8.4:+57119638 | MS.gene59750:CDS |
| TGAATCTTCAAGAGATTATA+GGG | 0.372345 | 8.4:+57121470 | MS.gene59750:CDS |
| GCAGAGAAATGATTCAAGTT+TGG | 0.372559 | 8.4:-57121499 | None:intergenic |
| TTTCAATTATAAACCTTAAC+CGG | 0.372817 | 8.4:+57120987 | MS.gene59750:CDS |
| GTAATTATGATCCTGCTTCC+AGG | 0.375005 | 8.4:-57119425 | None:intergenic |
| TTGAGCTTCTGCTTTATGAT+TGG | 0.375212 | 8.4:-57119317 | None:intergenic |
| TAAAAGCATGTTAATGAATC+AGG | 0.377637 | 8.4:+57121552 | MS.gene59750:CDS |
| TTCAAAATGTCTGCATAACT+TGG | 0.380465 | 8.4:-57119572 | None:intergenic |
| CCATCTTTCCCAATATTTCT+GGG | 0.382320 | 8.4:-57120913 | None:intergenic |
| TTATAAACCTTAACCGGCTT+CGG | 0.383199 | 8.4:+57120993 | MS.gene59750:CDS |
| TTGCCATTGACAAACACTTC+AGG | 0.386675 | 8.4:-57122122 | None:intergenic |
| TGTCCCATCATTGAATTTGT+AGG | 0.389963 | 8.4:-57122434 | None:intergenic |
| AACGACAAGTAAACCAATTC+AGG | 0.390268 | 8.4:+57120507 | MS.gene59750:CDS |
| GAGAGTTTCCCAGAAATATT+GGG | 0.391131 | 8.4:+57120905 | MS.gene59750:CDS |
| ACTGCACATCATTGACTTCC+CGG | 0.391955 | 8.4:+57121527 | MS.gene59750:CDS |
| TTCTTTGGATGAAAATCATC+TGG | 0.392574 | 8.4:-57120451 | None:intergenic |
| TGTAACAGAGCTTTGTATAG+AGG | 0.397558 | 8.4:+57120940 | MS.gene59750:CDS |
| GGGCTAAACTTGACCGAGAT+AGG | 0.404660 | 8.4:-57122101 | None:intergenic |
| ACTCATATACCTGATGTATC+TGG | 0.408743 | 8.4:+57120698 | MS.gene59750:CDS |
| TCCCAATAGTTTAAGAGTGT+TGG | 0.411087 | 8.4:+57120399 | MS.gene59750:CDS |
| TGAAAGATTTGGACCTTTCA+GGG | 0.416565 | 8.4:+57121242 | MS.gene59750:CDS |
| TTAATTTCCGAAGCCGGTTA+AGG | 0.416806 | 8.4:-57121000 | None:intergenic |
| CTGATGATGTAGTCCAATTA+GGG | 0.418153 | 8.4:+57119093 | MS.gene59750:CDS |
| AGGGTTGTGGTTATCTAAAC+CGG | 0.422080 | 8.4:+57121108 | MS.gene59750:CDS |
| GCAGGAGGATCCGATTGGTT+TGG | 0.424090 | 8.4:+57119401 | MS.gene59750:CDS |
| TTTAAGAGTGTTGGAATGGT+GGG | 0.426736 | 8.4:+57120408 | MS.gene59750:CDS |
| CCAGATAAGCTTTGATTCGT+TGG | 0.429048 | 8.4:+57119736 | MS.gene59750:CDS |
| GGATCCTACAAATTCAATGA+TGG | 0.429212 | 8.4:+57122430 | MS.gene59750:CDS |
| CAAGAGAACGTAGTAGGTTA+TGG | 0.433885 | 8.4:+57119987 | MS.gene59750:CDS |
| AAGCAGCTACAGGTTATTGC+AGG | 0.434078 | 8.4:+57119383 | MS.gene59750:CDS |
| CCATTAGCTTTGAGAGCAGT+AGG | 0.436651 | 8.4:+57119623 | MS.gene59750:CDS |
| GGCTTATACGAGAAATTGTT+GGG | 0.437026 | 8.4:+57121338 | MS.gene59750:CDS |
| ATGACGGTAAAGAAGTATGT+TGG | 0.438689 | 8.4:+57120293 | MS.gene59750:CDS |
| TGCCATTGACAAACACTTCA+GGG | 0.441790 | 8.4:-57122121 | None:intergenic |
| TCCGATTCTTCACCTTTGCC+CGG | 0.443606 | 8.4:-57121127 | None:intergenic |
| TCAATCAGTGACCAGTTTGA+AGG | 0.444736 | 8.4:+57119170 | MS.gene59750:CDS |
| TTCGTTGGAGGAAGAAGAAA+AGG | 0.446081 | 8.4:+57119751 | MS.gene59750:CDS |
| TCAGAAAGTGACACTCTTTG+AGG | 0.446285 | 8.4:-57121291 | None:intergenic |
| GCTCACGTGGTGATTCTTGT+CGG | 0.447236 | 8.4:-57119964 | None:intergenic |
| ATTGGTTTGGTCCTGGAAGC+AGG | 0.448138 | 8.4:+57119414 | MS.gene59750:CDS |
| CCTACTGCTCTCAAAGCTAA+TGG | 0.450846 | 8.4:-57119623 | None:intergenic |
| TTTCGAGATGTGAAGGGTTG+TGG | 0.452031 | 8.4:+57121095 | MS.gene59750:CDS |
| ATATATGGAATGGGTGGGAT+CGG | 0.454579 | 8.4:+57119116 | MS.gene59750:CDS |
| ATTCAAATTCATGACTCAGT+TGG | 0.454593 | 8.4:+57120767 | MS.gene59750:CDS |
| TCAAGCGAGGTTAATCTGAT+TGG | 0.457283 | 8.4:-57120851 | None:intergenic |
| GCTTAGTAAGATGTGTGAAT+TGG | 0.460620 | 8.4:+57119262 | MS.gene59750:CDS |
| GAATTGGTTTACTTGTCGTT+AGG | 0.462418 | 8.4:-57120504 | None:intergenic |
| GTTTAAGAGTGTTGGAATGG+TGG | 0.466188 | 8.4:+57120407 | MS.gene59750:CDS |
| TGGTTTGCACACCATACAAC+GGG | 0.466863 | 8.4:+57121999 | MS.gene59750:CDS |
| AGGCTTATACGAGAAATTGT+TGG | 0.467499 | 8.4:+57121337 | MS.gene59750:CDS |
| TCTTACTAAGCATAGTCTCT+TGG | 0.469267 | 8.4:-57119250 | None:intergenic |
| AAGAGTGACTTTCTGCTGCC+AGG | 0.471737 | 8.4:-57121420 | None:intergenic |
| TTTGGGAAATCTTAAGACAT+TGG | 0.472764 | 8.4:+57120793 | MS.gene59750:CDS |
| CTATTGACTCTCCCGTTGTA+TGG | 0.473539 | 8.4:-57122010 | None:intergenic |
| AGCCCTGAAGTGTTTGTCAA+TGG | 0.475168 | 8.4:+57122119 | MS.gene59750:CDS |
| TGCCAGGTCTAAGTATTTCA+AGG | 0.481841 | 8.4:-57121404 | None:intergenic |
| ACAAGACACACAGATATTGC+AGG | 0.482791 | 8.4:-57122056 | None:intergenic |
| ACCGGGCAAAGGTGAAGAAT+CGG | 0.484775 | 8.4:+57121126 | MS.gene59750:CDS |
| ACACTCACCAAACAAAGTTC+AGG | 0.487581 | 8.4:-57121073 | None:intergenic |
| TCAGATGACTTCTTTCCAAA+AGG | 0.489609 | 8.4:+57121199 | MS.gene59750:CDS |
| ATTTAACCAAACAAGTGGAT+TGG | 0.490620 | 8.4:+57122358 | MS.gene59750:CDS |
| TGACGGTAAAGAAGTATGTT+GGG | 0.492035 | 8.4:+57120294 | MS.gene59750:CDS |
| CCAGAAATATTGGGAAAGAT+GGG | 0.492794 | 8.4:+57120914 | MS.gene59750:CDS |
| CCAATTAGGGATATATGGAA+TGG | 0.494813 | 8.4:+57119106 | MS.gene59750:CDS |
| AAACTATTGGGAAGATGTGT+GGG | 0.496249 | 8.4:-57120388 | None:intergenic |
| GTGTGGGGCCTCTGTTAAAA+CGG | 0.496956 | 8.4:-57120372 | None:intergenic |
| GGATCCGATTGGTTTGGTCC+TGG | 0.498872 | 8.4:+57119407 | MS.gene59750:CDS |
| GAAAGCAAGAACCTTCAAAC+TGG | 0.499267 | 8.4:-57119181 | None:intergenic |
| CTTAAGACATTGGATGCTGC+TGG | 0.503977 | 8.4:+57120803 | MS.gene59750:CDS |
| AGCGAGGTTAATCTGATTGG+CGG | 0.504865 | 8.4:-57120848 | None:intergenic |
| TGACAAATTGAAGCAGCTAC+AGG | 0.507064 | 8.4:+57119373 | MS.gene59750:CDS |
| TAGGGTTGATATAATATATG+AGG | 0.511725 | 8.4:+57119478 | MS.gene59750:CDS |
| AAATGAATGGGAAAGTGCAT+TGG | 0.519364 | 8.4:+57119670 | MS.gene59750:CDS |
| CATAACCTACTACGTTCTCT+TGG | 0.520650 | 8.4:-57119986 | None:intergenic |
| TTGTGAAATTATTCCCTGAA+AGG | 0.522319 | 8.4:-57121255 | None:intergenic |
| GATCCTACAAATTCAATGAT+GGG | 0.526137 | 8.4:+57122431 | MS.gene59750:CDS |
| TGACAGGAATCTGTAGAAGC+TGG | 0.529997 | 8.4:+57121936 | MS.gene59750:intron |
| CATGTATTTAACCAAACAAG+TGG | 0.530519 | 8.4:+57122353 | MS.gene59750:CDS |
| GTTACTGCTGATCAAGCTGT+TGG | 0.531327 | 8.4:+57119023 | MS.gene59750:CDS |
| TTTGGGAGGCCAGATACATC+AGG | 0.539700 | 8.4:-57120707 | None:intergenic |
| GCATTTGTTAGCAATGCATA+GGG | 0.540353 | 8.4:+57119460 | MS.gene59750:CDS |
| GTGAGTGTTTCGAGATGTGA+AGG | 0.542705 | 8.4:+57121088 | MS.gene59750:CDS |
| GAAAATGTTTCTAATTTCTG+TGG | 0.545965 | 8.4:-57121364 | None:intergenic |
| GCTTCCAGGACCAAACCAAT+CGG | 0.547850 | 8.4:-57119411 | None:intergenic |
| ATAGTTTAAGAGTGTTGGAA+TGG | 0.551845 | 8.4:+57120404 | MS.gene59750:CDS |
| TCATGTGGTGATTTCATATG+TGG | 0.552414 | 8.4:+57122274 | MS.gene59750:CDS |
| GTAACAGAGCTTTGTATAGA+GGG | 0.554330 | 8.4:+57120941 | MS.gene59750:CDS |
| CAATTAGGGATATATGGAAT+GGG | 0.554444 | 8.4:+57119107 | MS.gene59750:CDS |
| GTATGGTGTGCAAACCAATC+TGG | 0.555516 | 8.4:-57121993 | None:intergenic |
| TTAAGAGTGTTGGAATGGTG+GGG | 0.555644 | 8.4:+57120409 | MS.gene59750:CDS |
| TAGTCTCTTGGAGATGCTCT+AGG | 0.556285 | 8.4:-57119238 | None:intergenic |
| AGCATTTGTTAGCAATGCAT+AGG | 0.557419 | 8.4:+57119459 | MS.gene59750:CDS |
| CTTTACCCATGTCTTCAACC+AGG | 0.558386 | 8.4:-57119934 | None:intergenic |
| TCAAAGAGTGTCACTTTCTG+AGG | 0.559439 | 8.4:+57121293 | MS.gene59750:CDS |
| GAGGTAGATGAATTAAGTGA+AGG | 0.559827 | 8.4:+57119497 | MS.gene59750:CDS |
| CTGGATTTCCCCAAAGATGA+CGG | 0.559884 | 8.4:+57120277 | MS.gene59750:CDS |
| GTGAGCCAAGAGAACGTAGT+AGG | 0.560863 | 8.4:+57119981 | MS.gene59750:CDS |
| GATAAGCTTTGATTCGTTGG+AGG | 0.565802 | 8.4:+57119739 | MS.gene59750:CDS |
| TAAACTATTGGGAAGATGTG+TGG | 0.566218 | 8.4:-57120389 | None:intergenic |
| TCTTGTGACATTGCATGACC+TGG | 0.568061 | 8.4:+57119916 | MS.gene59750:CDS |
| CTTCTTTACCGTCATCTTTG+GGG | 0.571665 | 8.4:-57120285 | None:intergenic |
| TAAACTTGAAGATGTGAGTG+AGG | 0.573282 | 8.4:+57119289 | MS.gene59750:CDS |
| CTACGTTCTCTTGGCTCACG+TGG | 0.578015 | 8.4:-57119977 | None:intergenic |
| GAAGACGTGGAAGACATACT+GGG | 0.580773 | 8.4:+57119818 | MS.gene59750:CDS |
| GAGTGGTTGCCAAATATAGC+GGG | 0.581919 | 8.4:+57122327 | MS.gene59750:CDS |
| CGTGAATGAGAAACCTATCT+CGG | 0.588719 | 8.4:+57122088 | MS.gene59750:CDS |
| GAGATTACTTTGTTCACTCG+AGG | 0.588749 | 8.4:-57119053 | None:intergenic |
| TGGTTATCTAAACCGGGCAA+AGG | 0.590146 | 8.4:+57121115 | MS.gene59750:CDS |
| GCATGACCTGGTTGAAGACA+TGG | 0.590529 | 8.4:+57119928 | MS.gene59750:CDS |
| GGTAAAGAAGTATGTTGGGA+TGG | 0.590741 | 8.4:+57120298 | MS.gene59750:CDS |
| AAACTTGAAGATGTGAGTGA+GGG | 0.594430 | 8.4:+57119290 | MS.gene59750:CDS |
| ATGTTCTGTATTTGAAGACA+AGG | 0.603763 | 8.4:-57121152 | None:intergenic |
| TTAGGGATATATGGAATGGG+TGG | 0.603772 | 8.4:+57119110 | MS.gene59750:CDS |
| TCATCTGGTAATGACGGTGA+AGG | 0.611668 | 8.4:-57120436 | None:intergenic |
| CAGCTACAGGTTATTGCAGG+AGG | 0.626029 | 8.4:+57119386 | MS.gene59750:CDS |
| GGGTTGTGGTTATCTAAACC+GGG | 0.626816 | 8.4:+57121109 | MS.gene59750:CDS |
| AATGGGAAAGTGCATTGGAT+CGG | 0.627693 | 8.4:+57119675 | MS.gene59750:CDS |
| ATCCTTGAAATACTTAGACC+TGG | 0.628855 | 8.4:+57121402 | MS.gene59750:CDS |
| ATTTATTGAGACTATCGTTG+AGG | 0.629386 | 8.4:+57118986 | MS.gene59750:CDS |
| AAATTAAAACTACACATCTG+TGG | 0.630544 | 8.4:+57121016 | MS.gene59750:CDS |
| AAGGTCCAAATCTTTCACAT+TGG | 0.631057 | 8.4:-57121236 | None:intergenic |
| ATCTCTCGTAAAGATTGACA+AGG | 0.631557 | 8.4:+57119892 | MS.gene59750:CDS |
| TGAGTGTTTCGAGATGTGAA+GGG | 0.632052 | 8.4:+57121089 | MS.gene59750:CDS |
| CAATGAAGTTCCAATAAGAG+TGG | 0.633809 | 8.4:+57122310 | MS.gene59750:CDS |
| TTATTGCAGGAGGATCCGAT+TGG | 0.634794 | 8.4:+57119396 | MS.gene59750:CDS |
| AAGATTAAGCTGTTCAAGCG+AGG | 0.635369 | 8.4:-57120864 | None:intergenic |
| AGAGTGGTTGCCAAATATAG+CGG | 0.635491 | 8.4:+57122326 | MS.gene59750:CDS |
| TGATTGGCGGAAAAGTCTTG+AGG | 0.636105 | 8.4:-57120835 | None:intergenic |
| TAGGGATATATGGAATGGGT+GGG | 0.637214 | 8.4:+57119111 | MS.gene59750:CDS |
| CAAGACACACAGATATTGCA+GGG | 0.637712 | 8.4:-57122055 | None:intergenic |
| GTAGACTAACTGATTGACAA+AGG | 0.638985 | 8.4:-57122153 | None:intergenic |
| TTGGTTTGCACACCATACAA+CGG | 0.639418 | 8.4:+57121998 | MS.gene59750:CDS |
| CTACAATTTCAGGATAGCAA+CGG | 0.640385 | 8.4:+57122172 | MS.gene59750:CDS |
| TGAAAATCATCTGGTAATGA+CGG | 0.644325 | 8.4:-57120442 | None:intergenic |
| AACTATTGGGAAGATGTGTG+GGG | 0.647737 | 8.4:-57120387 | None:intergenic |
| TGGACGTGAACTGGAAGACG+TGG | 0.650352 | 8.4:+57119805 | MS.gene59750:CDS |
| ATTGTTTGGATATCGTTGTG+AGG | 0.650391 | 8.4:-57119710 | None:intergenic |
| CAGGATCATAATTACAACAC+GGG | 0.652399 | 8.4:+57119433 | MS.gene59750:CDS |
| TATGAGTTATCGAATTACTG+TGG | 0.689576 | 8.4:-57120682 | None:intergenic |
| TCTCTCGTAAAGATTGACAA+GGG | 0.703026 | 8.4:+57119893 | MS.gene59750:CDS |
| AAGACGTGGAAGACATACTG+GGG | 0.707802 | 8.4:+57119819 | MS.gene59750:CDS |
| CATGACCTGGTTGAAGACAT+GGG | 0.710013 | 8.4:+57119929 | MS.gene59750:CDS |
| CAAAGCTAATGGAAGCCCAG+AGG | 0.715700 | 8.4:-57119612 | None:intergenic |
| GCAGGATCATAATTACAACA+CGG | 0.720799 | 8.4:+57119432 | MS.gene59750:CDS |
| AGACAATGAGTGGAATCATG+TGG | 0.742228 | 8.4:+57122259 | MS.gene59750:CDS |
| AGACGTGGAAGACATACTGG+GGG | 0.745924 | 8.4:+57119820 | MS.gene59750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATTAATTTCTATCAAA+TGG | + | chr8.4:57121849-57121868 | MS.gene59750:intron | 10.0% |
| !! | TTTATTAGACTAAATAAAAA+AGG | - | chr8.4:57121592-57121611 | None:intergenic | 10.0% |
| !!! | AAAGAAATTTTTTCTAAATT+TGG | - | chr8.4:57120728-57120747 | None:intergenic | 10.0% |
| !!! | AAATTTTATTGATTTTTCAT+TGG | + | chr8.4:57120589-57120608 | MS.gene59750:intron | 10.0% |
| !!! | AAGAAATTTTTTCTAAATTT+GGG | - | chr8.4:57120727-57120746 | None:intergenic | 10.0% |
| !! | TGTTAAAATTTGAAGATAAT+GGG | + | chr8.4:57122222-57122241 | MS.gene59750:CDS | 15.0% |
| !! | TTAAGGTTTATAATTGAAAA+TGG | - | chr8.4:57120986-57121005 | None:intergenic | 15.0% |
| !! | AAAAAAAAACTGTTGTGAAT+TGG | - | chr8.4:57120131-57120150 | None:intergenic | 20.0% |
| !! | AAACTGTTAAAAGTTAATCT+AGG | - | chr8.4:57121903-57121922 | None:intergenic | 20.0% |
| !! | AATAAAAAAGGAATCAAAAG+AGG | - | chr8.4:57121580-57121599 | None:intergenic | 20.0% |
| !! | CTGTTAAAATTTGAAGATAA+TGG | + | chr8.4:57122221-57122240 | MS.gene59750:CDS | 20.0% |
| !! | GTAAAAATTATAGTACTTTG+AGG | + | chr8.4:57122473-57122492 | MS.gene59750:CDS | 20.0% |
| !! | TAAAATTGAAAGCTTATTTC+TGG | + | chr8.4:57120258-57120277 | MS.gene59750:CDS | 20.0% |
| !! | TTTCAATTATAAACCTTAAC+CGG | + | chr8.4:57120987-57121006 | MS.gene59750:CDS | 20.0% |
| !!! | AAATTTTTTCTAAATTTGGG+AGG | - | chr8.4:57120724-57120743 | None:intergenic | 20.0% |
| !!! | ACTGTACTTTTTTTCTTAAA+AGG | + | chr8.4:57120228-57120247 | MS.gene59750:intron | 20.0% |
| !!! | CACAATTTCATTTTAATGAT+TGG | + | chr8.4:57121631-57121650 | MS.gene59750:intron | 20.0% |
| !!! | TTTTTCTTTTTTTCAATGCA+GGG | + | chr8.4:57120629-57120648 | MS.gene59750:intron | 20.0% |
| !!! | TTTTTTCTTTTTTTCAATGC+AGG | + | chr8.4:57120628-57120647 | MS.gene59750:intron | 20.0% |
| ! | AAATTAAAACTACACATCTG+TGG | + | chr8.4:57121016-57121035 | MS.gene59750:CDS | 25.0% |
| ! | AACATTGATAAATGCGAATT+TGG | + | chr8.4:57122409-57122428 | MS.gene59750:CDS | 25.0% |
| ! | ACAATACAATTATAGATGCT+TGG | - | chr8.4:57120202-57120221 | None:intergenic | 25.0% |
| ! | AGAGAAAATTCAGTGAAATT+TGG | + | chr8.4:57119215-57119234 | MS.gene59750:CDS | 25.0% |
| ! | TGAATCTTCAAGAGATTATA+GGG | + | chr8.4:57121470-57121489 | MS.gene59750:CDS | 25.0% |
| ! | TGGCAAAAACATAAATGAAT+GGG | + | chr8.4:57119658-57119677 | MS.gene59750:CDS | 25.0% |
| ! | TTGGCAAAAACATAAATGAA+TGG | + | chr8.4:57119657-57119676 | MS.gene59750:CDS | 25.0% |
| !! | ATTAGAAACATTTTCTGCAA+AGG | + | chr8.4:57121372-57121391 | MS.gene59750:CDS | 25.0% |
| !! | ATTTTTACTCTTACTTTCTG+AGG | - | chr8.4:57122461-57122480 | None:intergenic | 25.0% |
| !! | CAAACAGAAAAAGGTTATTT+TGG | + | chr8.4:57119337-57119356 | MS.gene59750:CDS | 25.0% |
| !! | GAAAATGGCAATTCTTTTAT+AGG | - | chr8.4:57120971-57120990 | None:intergenic | 25.0% |
| !! | GAAAATGTTTCTAATTTCTG+TGG | - | chr8.4:57121367-57121386 | None:intergenic | 25.0% |
| !! | TAAAAGCATGTTAATGAATC+AGG | + | chr8.4:57121552-57121571 | MS.gene59750:CDS | 25.0% |
| !!! | ATTTATGTTTTTGCCAAACA+AGG | - | chr8.4:57119654-57119673 | None:intergenic | 25.0% |
| !!! | TAGGGTTGATATAATATATG+AGG | + | chr8.4:57119478-57119497 | MS.gene59750:CDS | 25.0% |
| !!! | TCACGTTTTAGAAGAAAATT+CGG | + | chr8.4:57120027-57120046 | MS.gene59750:CDS | 25.0% |
| !!! | TTTTCTTTTTTTCAATGCAG+GGG | + | chr8.4:57120630-57120649 | MS.gene59750:intron | 25.0% |
| ATGTTCTGTATTTGAAGACA+AGG | - | chr8.4:57121155-57121174 | None:intergenic | 30.0% | |
| ATTCAAATTCATGACTCAGT+TGG | + | chr8.4:57120767-57120786 | MS.gene59750:CDS | 30.0% | |
| ATTTAACCAAACAAGTGGAT+TGG | + | chr8.4:57122358-57122377 | MS.gene59750:CDS | 30.0% | |
| ATTTATTGAGACTATCGTTG+AGG | + | chr8.4:57118986-57119005 | MS.gene59750:CDS | 30.0% | |
| CAATTAGGGATATATGGAAT+GGG | + | chr8.4:57119107-57119126 | MS.gene59750:CDS | 30.0% | |
| CACTTGTTTGGTTAAATACA+TGG | - | chr8.4:57122355-57122374 | None:intergenic | 30.0% | |
| CATGTATTTAACCAAACAAG+TGG | + | chr8.4:57122353-57122372 | MS.gene59750:CDS | 30.0% | |
| GATCCTACAAATTCAATGAT+GGG | + | chr8.4:57122431-57122450 | MS.gene59750:CDS | 30.0% | |
| GTGAATCTTCAAGAGATTAT+AGG | + | chr8.4:57121469-57121488 | MS.gene59750:CDS | 30.0% | |
| TATGAGTTATCGAATTACTG+TGG | - | chr8.4:57120685-57120704 | None:intergenic | 30.0% | |
| TCCAACACTCTTAAACTATT+GGG | - | chr8.4:57120403-57120422 | None:intergenic | 30.0% | |
| TTATCACCGCTAAAGTTTAT+AGG | + | chr8.4:57121777-57121796 | MS.gene59750:intron | 30.0% | |
| TTCAAAATGTCTGCATAACT+TGG | - | chr8.4:57119575-57119594 | None:intergenic | 30.0% | |
| TTCCAACACTCTTAAACTAT+TGG | - | chr8.4:57120404-57120423 | None:intergenic | 30.0% | |
| TTCTTTGGATGAAAATCATC+TGG | - | chr8.4:57120454-57120473 | None:intergenic | 30.0% | |
| TTGTGAAATTATTCCCTGAA+AGG | - | chr8.4:57121258-57121277 | None:intergenic | 30.0% | |
| TTTCTAAACTTATCACTGAC+AGG | + | chr8.4:57121920-57121939 | MS.gene59750:intron | 30.0% | |
| TTTGGGAAATCTTAAGACAT+TGG | + | chr8.4:57120793-57120812 | MS.gene59750:CDS | 30.0% | |
| ! | ATATACTTTTGTTCGATCTG+CGG | + | chr8.4:57122198-57122217 | MS.gene59750:CDS | 30.0% |
| ! | ATATCTGTGTGTCTTGTTAT+TGG | + | chr8.4:57122062-57122081 | MS.gene59750:CDS | 30.0% |
| ! | ATCAGTTAGTCTACAATTTC+AGG | + | chr8.4:57122162-57122181 | MS.gene59750:CDS | 30.0% |
| ! | CGCATTTATCAATGTTTTCT+GGG | - | chr8.4:57122405-57122424 | None:intergenic | 30.0% |
| ! | GATATTGCTTGTTTCTTCAA+TGG | + | chr8.4:57119785-57119804 | MS.gene59750:CDS | 30.0% |
| ! | GATTTATTGATGGAGTGTTT+AGG | + | chr8.4:57121714-57121733 | MS.gene59750:intron | 30.0% |
| ! | GATTTTCATCCAAAGAAACT+TGG | + | chr8.4:57120457-57120476 | MS.gene59750:CDS | 30.0% |
| ! | GCATTTATCAATGTTTTCTG+GGG | - | chr8.4:57122404-57122423 | None:intergenic | 30.0% |
| ! | TCATTAACATGCTTTTACAC+CGG | - | chr8.4:57121549-57121568 | None:intergenic | 30.0% |
| ! | TCGCATTTATCAATGTTTTC+TGG | - | chr8.4:57122406-57122425 | None:intergenic | 30.0% |
| ! | TGAAAATCATCTGGTAATGA+CGG | - | chr8.4:57120445-57120464 | None:intergenic | 30.0% |
| ! | TTCTAACAACAAGTGTTTTG+AGG | - | chr8.4:57120348-57120367 | None:intergenic | 30.0% |
| !! | AATCTCTTGATTTGCTTTGT+TGG | + | chr8.4:57119522-57119541 | MS.gene59750:CDS | 30.0% |
| !! | ATAGTTTAAGAGTGTTGGAA+TGG | + | chr8.4:57120404-57120423 | MS.gene59750:CDS | 30.0% |
| !! | TATCTGTGTGTCTTGTTATT+GGG | + | chr8.4:57122063-57122082 | MS.gene59750:CDS | 30.0% |
| !! | TCTTTCCAAAAGGTCTTATT+TGG | + | chr8.4:57121209-57121228 | MS.gene59750:CDS | 30.0% |
| !!! | TTTCTTTTTTTCAATGCAGG+GGG | + | chr8.4:57120631-57120650 | MS.gene59750:intron | 30.0% |
| AAACTATTGGGAAGATGTGT+GGG | - | chr8.4:57120391-57120410 | None:intergenic | 35.0% | |
| AAACTTGAAGATGTGAGTGA+GGG | + | chr8.4:57119290-57119309 | MS.gene59750:CDS | 35.0% | |
| AACGACAAGTAAACCAATTC+AGG | + | chr8.4:57120507-57120526 | MS.gene59750:CDS | 35.0% | |
| AAGGTCCAAATCTTTCACAT+TGG | - | chr8.4:57121239-57121258 | None:intergenic | 35.0% | |
| ACTCATATACCTGATGTATC+TGG | + | chr8.4:57120698-57120717 | MS.gene59750:CDS | 35.0% | |
| ACTTCTTTACCGTCATCTTT+GGG | - | chr8.4:57120289-57120308 | None:intergenic | 35.0% | |
| AGCAATCAACTCATATATGC+TGG | + | chr8.4:57120052-57120071 | MS.gene59750:intron | 35.0% | |
| AGGCTTATACGAGAAATTGT+TGG | + | chr8.4:57121337-57121356 | MS.gene59750:CDS | 35.0% | |
| ATCCTTGAAATACTTAGACC+TGG | + | chr8.4:57121402-57121421 | MS.gene59750:CDS | 35.0% | |
| ATCTCTCGTAAAGATTGACA+AGG | + | chr8.4:57119892-57119911 | MS.gene59750:CDS | 35.0% | |
| ATTGTTTGGATATCGTTGTG+AGG | - | chr8.4:57119713-57119732 | None:intergenic | 35.0% | |
| CAACAGAAGATAAGAAACAG+AGG | - | chr8.4:57120102-57120121 | None:intergenic | 35.0% | |
| CAATGAAGTTCCAATAAGAG+TGG | + | chr8.4:57122310-57122329 | MS.gene59750:CDS | 35.0% | |
| CAGGATCATAATTACAACAC+GGG | + | chr8.4:57119433-57119452 | MS.gene59750:CDS | 35.0% | |
| CATGACTCAGTTGGATATTT+GGG | + | chr8.4:57120776-57120795 | MS.gene59750:CDS | 35.0% | |
| CCAATTAGGGATATATGGAA+TGG | + | chr8.4:57119106-57119125 | MS.gene59750:CDS | 35.0% | |
| CCAGAAATATTGGGAAAGAT+GGG | + | chr8.4:57120914-57120933 | MS.gene59750:CDS | 35.0% | |
| CCATCTTTCCCAATATTTCT+GGG | - | chr8.4:57120916-57120935 | None:intergenic | 35.0% | |
| CCATTCCATATATCCCTAAT+TGG | - | chr8.4:57119109-57119128 | None:intergenic | 35.0% | |
| CTACAATTTCAGGATAGCAA+CGG | + | chr8.4:57122172-57122191 | MS.gene59750:CDS | 35.0% | |
| CTGGAAAAAAGATACCAGAT+TGG | + | chr8.4:57121979-57121998 | MS.gene59750:CDS | 35.0% | |
| GAAACGCCTATAAACTTTAG+CGG | - | chr8.4:57121786-57121805 | None:intergenic | 35.0% | |
| GAACAAAGTAATCTCACTTC+TGG | + | chr8.4:57119061-57119080 | MS.gene59750:CDS | 35.0% | |
| GAGAGTTTCCCAGAAATATT+GGG | + | chr8.4:57120905-57120924 | MS.gene59750:CDS | 35.0% | |
| GAGGTAGATGAATTAAGTGA+AGG | + | chr8.4:57119497-57119516 | MS.gene59750:CDS | 35.0% | |
| GCAGGATCATAATTACAACA+CGG | + | chr8.4:57119432-57119451 | MS.gene59750:CDS | 35.0% | |
| GCTTAGTAAGATGTGTGAAT+TGG | + | chr8.4:57119262-57119281 | MS.gene59750:CDS | 35.0% | |
| GGATCCTACAAATTCAATGA+TGG | + | chr8.4:57122430-57122449 | MS.gene59750:CDS | 35.0% | |
| GGCTTATACGAGAAATTGTT+GGG | + | chr8.4:57121338-57121357 | MS.gene59750:CDS | 35.0% | |
| GGTCATAAATTTGACAGTTC+TGG | + | chr8.4:57120652-57120671 | MS.gene59750:CDS | 35.0% | |
| GTAGACTAACTGATTGACAA+AGG | - | chr8.4:57122156-57122175 | None:intergenic | 35.0% | |
| GTAGTCCAATTAGGGATATA+TGG | + | chr8.4:57119101-57119120 | MS.gene59750:CDS | 35.0% | |
| GTTTGCCAATGTGAAAGATT+TGG | + | chr8.4:57121231-57121250 | MS.gene59750:CDS | 35.0% | |
| TAAACTATTGGGAAGATGTG+TGG | - | chr8.4:57120392-57120411 | None:intergenic | 35.0% | |
| TAAACTTGAAGATGTGAGTG+AGG | + | chr8.4:57119289-57119308 | MS.gene59750:CDS | 35.0% | |
| TACACAATACTTGCCTGAAT+TGG | - | chr8.4:57120523-57120542 | None:intergenic | 35.0% | |
| TACTTCTTTACCGTCATCTT+TGG | - | chr8.4:57120290-57120309 | None:intergenic | 35.0% | |
| TATCTTCCAATCCACTTGTT+TGG | - | chr8.4:57122367-57122386 | None:intergenic | 35.0% | |
| TATTTGGCAACCACTCTTAT+TGG | - | chr8.4:57122323-57122342 | None:intergenic | 35.0% | |
| TCAGATGACTTCTTTCCAAA+AGG | + | chr8.4:57121199-57121218 | MS.gene59750:CDS | 35.0% | |
| TCATGACTCAGTTGGATATT+TGG | + | chr8.4:57120775-57120794 | MS.gene59750:CDS | 35.0% | |
| TCATGTGGTGATTTCATATG+TGG | + | chr8.4:57122274-57122293 | MS.gene59750:CDS | 35.0% | |
| TCTCTCGTAAAGATTGACAA+GGG | + | chr8.4:57119893-57119912 | MS.gene59750:CDS | 35.0% | |
| TCTTACTAAGCATAGTCTCT+TGG | - | chr8.4:57119253-57119272 | None:intergenic | 35.0% | |
| TGAAAGATTTGGACCTTTCA+GGG | + | chr8.4:57121242-57121261 | MS.gene59750:CDS | 35.0% | |
| TGTCCCATCATTGAATTTGT+AGG | - | chr8.4:57122437-57122456 | None:intergenic | 35.0% | |
| TTGAGCTTCTGCTTTATGAT+TGG | - | chr8.4:57119320-57119339 | None:intergenic | 35.0% | |
| TTGAGTATGCCAAGTTTCTT+TGG | - | chr8.4:57120469-57120488 | None:intergenic | 35.0% | |
| ! | AAATGAATGGGAAAGTGCAT+TGG | + | chr8.4:57119670-57119689 | MS.gene59750:CDS | 35.0% |
| ! | AACAAGATGTTTTCTTTGCC+TGG | + | chr8.4:57121960-57121979 | MS.gene59750:CDS | 35.0% |
| ! | AGCATTTGTTAGCAATGCAT+AGG | + | chr8.4:57119459-57119478 | MS.gene59750:CDS | 35.0% |
| ! | ATGACGGTAAAGAAGTATGT+TGG | + | chr8.4:57120293-57120312 | MS.gene59750:CDS | 35.0% |
| ! | CATTAACATGCTTTTACACC+GGG | - | chr8.4:57121548-57121567 | None:intergenic | 35.0% |
| ! | CATTGTTTTCAGACAATGAG+TGG | + | chr8.4:57122249-57122268 | MS.gene59750:CDS | 35.0% |
| ! | CTGATGATGTAGTCCAATTA+GGG | + | chr8.4:57119093-57119112 | MS.gene59750:CDS | 35.0% |
| ! | GAATTGGTTTACTTGTCGTT+AGG | - | chr8.4:57120507-57120526 | None:intergenic | 35.0% |
| ! | GCAAACCAAATAAGACCTTT+TGG | - | chr8.4:57121217-57121236 | None:intergenic | 35.0% |
| ! | GCAGAGAAATGATTCAAGTT+TGG | - | chr8.4:57121502-57121521 | None:intergenic | 35.0% |
| ! | GCATTTGTTAGCAATGCATA+GGG | + | chr8.4:57119460-57119479 | MS.gene59750:CDS | 35.0% |
| ! | GTAACAGAGCTTTGTATAGA+GGG | + | chr8.4:57120941-57120960 | MS.gene59750:CDS | 35.0% |
| ! | GTATCAGGCTGATTTATTGA+TGG | + | chr8.4:57121704-57121723 | MS.gene59750:intron | 35.0% |
| ! | TCCCAATAGTTTAAGAGTGT+TGG | + | chr8.4:57120399-57120418 | MS.gene59750:CDS | 35.0% |
| ! | TCTGATGATGTAGTCCAATT+AGG | + | chr8.4:57119092-57119111 | MS.gene59750:CDS | 35.0% |
| ! | TGACGGTAAAGAAGTATGTT+GGG | + | chr8.4:57120294-57120313 | MS.gene59750:CDS | 35.0% |
| ! | TGTAACAGAGCTTTGTATAG+AGG | + | chr8.4:57120940-57120959 | MS.gene59750:CDS | 35.0% |
| ! | TTATAAACCTTAACCGGCTT+CGG | + | chr8.4:57120993-57121012 | MS.gene59750:CDS | 35.0% |
| !! | AGAAATGTCCGTTTTAACAG+AGG | + | chr8.4:57120364-57120383 | MS.gene59750:CDS | 35.0% |
| !! | AGCTTATCTGGAGTATTGTT+TGG | - | chr8.4:57119727-57119746 | None:intergenic | 35.0% |
| !! | ATGTACTCACTTTTACCTCT+GGG | + | chr8.4:57119597-57119616 | MS.gene59750:CDS | 35.0% |
| !! | TATCAATGTTTTCTGGGGAA+TGG | - | chr8.4:57122399-57122418 | None:intergenic | 35.0% |
| !! | TATGTTTTTGCCAAACAAGG+AGG | - | chr8.4:57119651-57119670 | None:intergenic | 35.0% |
| !! | TTGGAATGTGCTGATTATTG+TGG | + | chr8.4:57121650-57121669 | MS.gene59750:intron | 35.0% |
| !! | TTTAAGAGTGTTGGAATGGT+GGG | + | chr8.4:57120408-57120427 | MS.gene59750:CDS | 35.0% |
| !! | TTTTCTGGGGAATGGTAAAT+CGG | - | chr8.4:57122391-57122410 | None:intergenic | 35.0% |
| !!! | CAATCTGGTATCTTTTTTCC+AGG | - | chr8.4:57121981-57122000 | None:intergenic | 35.0% |
| !!! | GTAGTTTTAATTTCCGAAGC+CGG | - | chr8.4:57121009-57121028 | None:intergenic | 35.0% |
| AACTATTGGGAAGATGTGTG+GGG | - | chr8.4:57120390-57120409 | None:intergenic | 40.0% | |
| AAGATTAAGCTGTTCAAGCG+AGG | - | chr8.4:57120867-57120886 | None:intergenic | 40.0% | |
| ACAAGACACACAGATATTGC+AGG | - | chr8.4:57122059-57122078 | None:intergenic | 40.0% | |
| ACACTCACCAAACAAAGTTC+AGG | - | chr8.4:57121076-57121095 | None:intergenic | 40.0% | |
| AGACAATGAGTGGAATCATG+TGG | + | chr8.4:57122259-57122278 | MS.gene59750:CDS | 40.0% | |
| AGAGTGGTTGCCAAATATAG+CGG | + | chr8.4:57122326-57122345 | MS.gene59750:CDS | 40.0% | |
| AGGGTTGTGGTTATCTAAAC+CGG | + | chr8.4:57121108-57121127 | MS.gene59750:CDS | 40.0% | |
| ATATATGGAATGGGTGGGAT+CGG | + | chr8.4:57119116-57119135 | MS.gene59750:CDS | 40.0% | |
| CAAGACACACAGATATTGCA+GGG | - | chr8.4:57122058-57122077 | None:intergenic | 40.0% | |
| CAAGAGAACGTAGTAGGTTA+TGG | + | chr8.4:57119987-57120006 | MS.gene59750:CDS | 40.0% | |
| CATAACCTACTACGTTCTCT+TGG | - | chr8.4:57119989-57120008 | None:intergenic | 40.0% | |
| CCAACGAATCAAAGCTTATC+TGG | - | chr8.4:57119739-57119758 | None:intergenic | 40.0% | |
| CCCAGAAATATTGGGAAAGA+TGG | + | chr8.4:57120913-57120932 | MS.gene59750:CDS | 40.0% | |
| CCCATCTTTCCCAATATTTC+TGG | - | chr8.4:57120917-57120936 | None:intergenic | 40.0% | |
| CGTGAATGAGAAACCTATCT+CGG | + | chr8.4:57122088-57122107 | MS.gene59750:CDS | 40.0% | |
| CTTCTTTACCGTCATCTTTG+GGG | - | chr8.4:57120288-57120307 | None:intergenic | 40.0% | |
| GAAAGCAAGAACCTTCAAAC+TGG | - | chr8.4:57119184-57119203 | None:intergenic | 40.0% | |
| GAGATTACTTTGTTCACTCG+AGG | - | chr8.4:57119056-57119075 | None:intergenic | 40.0% | |
| GCAGAAGCTCAAACAGAAAA+AGG | + | chr8.4:57119328-57119347 | MS.gene59750:CDS | 40.0% | |
| GGAGAGTTTCCCAGAAATAT+TGG | + | chr8.4:57120904-57120923 | MS.gene59750:CDS | 40.0% | |
| GTAATCTCACTTCTGGATCT+TGG | + | chr8.4:57119068-57119087 | MS.gene59750:CDS | 40.0% | |
| GTAATTATGATCCTGCTTCC+AGG | - | chr8.4:57119428-57119447 | None:intergenic | 40.0% | |
| GTGAAAGATTTGGACCTTTC+AGG | + | chr8.4:57121241-57121260 | MS.gene59750:CDS | 40.0% | |
| TACATGGATCCCGCTATATT+TGG | - | chr8.4:57122339-57122358 | None:intergenic | 40.0% | |
| TAGGGATATATGGAATGGGT+GGG | + | chr8.4:57119111-57119130 | MS.gene59750:CDS | 40.0% | |
| TCAAGCGAGGTTAATCTGAT+TGG | - | chr8.4:57120854-57120873 | None:intergenic | 40.0% | |
| TCAATCAGTGACCAGTTTGA+AGG | + | chr8.4:57119170-57119189 | MS.gene59750:CDS | 40.0% | |
| TCAGAAAGTGACACTCTTTG+AGG | - | chr8.4:57121294-57121313 | None:intergenic | 40.0% | |
| TCTTTCACACTGCTCAATTC+TGG | + | chr8.4:57120883-57120902 | MS.gene59750:CDS | 40.0% | |
| TGACAAATTGAAGCAGCTAC+AGG | + | chr8.4:57119373-57119392 | MS.gene59750:CDS | 40.0% | |
| TGAGTGTTTCGAGATGTGAA+GGG | + | chr8.4:57121089-57121108 | MS.gene59750:CDS | 40.0% | |
| TGCCAGGTCTAAGTATTTCA+AGG | - | chr8.4:57121407-57121426 | None:intergenic | 40.0% | |
| TGCCATTGACAAACACTTCA+GGG | - | chr8.4:57122124-57122143 | None:intergenic | 40.0% | |
| TTAATTTCCGAAGCCGGTTA+AGG | - | chr8.4:57121003-57121022 | None:intergenic | 40.0% | |
| TTAGGGATATATGGAATGGG+TGG | + | chr8.4:57119110-57119129 | MS.gene59750:CDS | 40.0% | |
| TTCGTTGGAGGAAGAAGAAA+AGG | + | chr8.4:57119751-57119770 | MS.gene59750:CDS | 40.0% | |
| TTGCCATTGACAAACACTTC+AGG | - | chr8.4:57122125-57122144 | None:intergenic | 40.0% | |
| TTTCTTCAATGGACGTGAAC+TGG | + | chr8.4:57119796-57119815 | MS.gene59750:CDS | 40.0% | |
| ! | AATGGGAAAGTGCATTGGAT+CGG | + | chr8.4:57119675-57119694 | MS.gene59750:CDS | 40.0% |
| ! | CCAGATAAGCTTTGATTCGT+TGG | + | chr8.4:57119736-57119755 | MS.gene59750:CDS | 40.0% |
| ! | CTTGTCGTTAGGCAATTTTC+AGG | - | chr8.4:57120496-57120515 | None:intergenic | 40.0% |
| ! | GATAAGCTTTGATTCGTTGG+AGG | + | chr8.4:57119739-57119758 | MS.gene59750:CDS | 40.0% |
| ! | GGTAAAGAAGTATGTTGGGA+TGG | + | chr8.4:57120298-57120317 | MS.gene59750:CDS | 40.0% |
| !! | CATGTACTCACTTTTACCTC+TGG | + | chr8.4:57119596-57119615 | MS.gene59750:CDS | 40.0% |
| !! | CTAGCATCAGCTATTTTCAG+AGG | - | chr8.4:57121681-57121700 | None:intergenic | 40.0% |
| !! | GTTTAAGAGTGTTGGAATGG+TGG | + | chr8.4:57120407-57120426 | MS.gene59750:CDS | 40.0% |
| !! | TCAAAGAGTGTCACTTTCTG+AGG | + | chr8.4:57121293-57121312 | MS.gene59750:CDS | 40.0% |
| !! | TTAAGAGTGTTGGAATGGTG+GGG | + | chr8.4:57120409-57120428 | MS.gene59750:CDS | 40.0% |
| !! | TTGGTTTGCACACCATACAA+CGG | + | chr8.4:57121998-57122017 | MS.gene59750:CDS | 40.0% |
| AAGACGTGGAAGACATACTG+GGG | + | chr8.4:57119819-57119838 | MS.gene59750:CDS | 45.0% | |
| AAGCAGCTACAGGTTATTGC+AGG | + | chr8.4:57119383-57119402 | MS.gene59750:CDS | 45.0% | |
| AGCGAGGTTAATCTGATTGG+CGG | - | chr8.4:57120851-57120870 | None:intergenic | 45.0% | |
| AGCTGATGCTAGACAGTATC+AGG | + | chr8.4:57121689-57121708 | MS.gene59750:intron | 45.0% | |
| CATGACCTGGTTGAAGACAT+GGG | + | chr8.4:57119929-57119948 | MS.gene59750:CDS | 45.0% | |
| CATGCTGCCTGAACTTTGTT+TGG | + | chr8.4:57121066-57121085 | MS.gene59750:CDS | 45.0% | |
| CCTACTGCTCTCAAAGCTAA+TGG | - | chr8.4:57119626-57119645 | None:intergenic | 45.0% | |
| CTGGATTTCCCCAAAGATGA+CGG | + | chr8.4:57120277-57120296 | MS.gene59750:CDS | 45.0% | |
| CTTAAGACATTGGATGCTGC+TGG | + | chr8.4:57120803-57120822 | MS.gene59750:CDS | 45.0% | |
| CTTTACCCATGTCTTCAACC+AGG | - | chr8.4:57119937-57119956 | None:intergenic | 45.0% | |
| GAAGACGTGGAAGACATACT+GGG | + | chr8.4:57119818-57119837 | MS.gene59750:CDS | 45.0% | |
| GAGTGGTTGCCAAATATAGC+GGG | + | chr8.4:57122327-57122346 | MS.gene59750:CDS | 45.0% | |
| GCCTGCAATCATCCAGATTA+AGG | - | chr8.4:57121321-57121340 | None:intergenic | 45.0% | |
| GCCTTAATCTGGATGATTGC+AGG | + | chr8.4:57121317-57121336 | MS.gene59750:CDS | 45.0% | |
| GGCAGCATGACAATGCTATT+TGG | - | chr8.4:57121055-57121074 | None:intergenic | 45.0% | |
| GGGTTGTGGTTATCTAAACC+GGG | + | chr8.4:57121109-57121128 | MS.gene59750:CDS | 45.0% | |
| GTATGGTGTGCAAACCAATC+TGG | - | chr8.4:57121996-57122015 | None:intergenic | 45.0% | |
| GTGAGTGTTTCGAGATGTGA+AGG | + | chr8.4:57121088-57121107 | MS.gene59750:CDS | 45.0% | |
| GTTACTGCTGATCAAGCTGT+TGG | + | chr8.4:57119023-57119042 | MS.gene59750:CDS | 45.0% | |
| TAGTCTCTTGGAGATGCTCT+AGG | - | chr8.4:57119241-57119260 | None:intergenic | 45.0% | |
| TCTTGTGACATTGCATGACC+TGG | + | chr8.4:57119916-57119935 | MS.gene59750:CDS | 45.0% | |
| TGACAGGAATCTGTAGAAGC+TGG | + | chr8.4:57121936-57121955 | MS.gene59750:intron | 45.0% | |
| TGATTGGCGGAAAAGTCTTG+AGG | - | chr8.4:57120838-57120857 | None:intergenic | 45.0% | |
| TGGTTATCTAAACCGGGCAA+AGG | + | chr8.4:57121115-57121134 | MS.gene59750:CDS | 45.0% | |
| TTATTGCAGGAGGATCCGAT+TGG | + | chr8.4:57119396-57119415 | MS.gene59750:CDS | 45.0% | |
| TTTCGAGATGTGAAGGGTTG+TGG | + | chr8.4:57121095-57121114 | MS.gene59750:CDS | 45.0% | |
| ! | AGCCCTGAAGTGTTTGTCAA+TGG | + | chr8.4:57122119-57122138 | MS.gene59750:CDS | 45.0% |
| ! | CTTTCTGAGGAGCCTTAATC+TGG | + | chr8.4:57121306-57121325 | MS.gene59750:CDS | 45.0% |
| ! | TCATCTGGTAATGACGGTGA+AGG | - | chr8.4:57120439-57120458 | None:intergenic | 45.0% |
| ! | TGGTTTGCACACCATACAAC+GGG | + | chr8.4:57121999-57122018 | MS.gene59750:CDS | 45.0% |
| !! | ACTGCACATCATTGACTTCC+CGG | + | chr8.4:57121527-57121546 | MS.gene59750:CDS | 45.0% |
| !! | CCATTAGCTTTGAGAGCAGT+AGG | + | chr8.4:57119623-57119642 | MS.gene59750:CDS | 45.0% |
| !! | CTATTGACTCTCCCGTTGTA+TGG | - | chr8.4:57122013-57122032 | None:intergenic | 45.0% |
| AAGAGTGACTTTCTGCTGCC+AGG | - | chr8.4:57121423-57121442 | None:intergenic | 50.0% | |
| ACCGGGCAAAGGTGAAGAAT+CGG | + | chr8.4:57121126-57121145 | MS.gene59750:CDS | 50.0% | |
| AGACGTGGAAGACATACTGG+GGG | + | chr8.4:57119820-57119839 | MS.gene59750:CDS | 50.0% | |
| ATACTGGGGGCTCATTATGG+TGG | + | chr8.4:57119833-57119852 | MS.gene59750:CDS | 50.0% | |
| CAAAGCTAATGGAAGCCCAG+AGG | - | chr8.4:57119615-57119634 | None:intergenic | 50.0% | |
| CAGCTACAGGTTATTGCAGG+AGG | + | chr8.4:57119386-57119405 | MS.gene59750:CDS | 50.0% | |
| GACATACTGGGGGCTCATTA+TGG | + | chr8.4:57119830-57119849 | MS.gene59750:CDS | 50.0% | |
| GCATGACCTGGTTGAAGACA+TGG | + | chr8.4:57119928-57119947 | MS.gene59750:CDS | 50.0% | |
| GCTCACGTGGTGATTCTTGT+CGG | - | chr8.4:57119967-57119986 | None:intergenic | 50.0% | |
| GCTTCCAGGACCAAACCAAT+CGG | - | chr8.4:57119414-57119433 | None:intergenic | 50.0% | |
| GGAAGACGTGGAAGACATAC+TGG | + | chr8.4:57119817-57119836 | MS.gene59750:CDS | 50.0% | |
| GGGCTAAACTTGACCGAGAT+AGG | - | chr8.4:57122104-57122123 | None:intergenic | 50.0% | |
| GTGAGCCAAGAGAACGTAGT+AGG | + | chr8.4:57119981-57120000 | MS.gene59750:CDS | 50.0% | |
| GTGTGGGGCCTCTGTTAAAA+CGG | - | chr8.4:57120375-57120394 | None:intergenic | 50.0% | |
| TCCGATTCTTCACCTTTGCC+CGG | - | chr8.4:57121130-57121149 | None:intergenic | 50.0% | |
| TGTACATGTGTGCGCTTGTG+CGG | + | chr8.4:57120539-57120558 | MS.gene59750:intron | 50.0% | |
| TTTGGGAGGCCAGATACATC+AGG | - | chr8.4:57120710-57120729 | None:intergenic | 50.0% | |
| !! | ATTGGTTTGGTCCTGGAAGC+AGG | + | chr8.4:57119414-57119433 | MS.gene59750:CDS | 50.0% |
| CTACGTTCTCTTGGCTCACG+TGG | - | chr8.4:57119980-57119999 | None:intergenic | 55.0% | |
| GCAGTAGGCTCCTCCTTGTT+TGG | + | chr8.4:57119638-57119657 | MS.gene59750:CDS | 55.0% | |
| TGGACGTGAACTGGAAGACG+TGG | + | chr8.4:57119805-57119824 | MS.gene59750:CDS | 55.0% | |
| ! | GCAGGAGGATCCGATTGGTT+TGG | + | chr8.4:57119401-57119420 | MS.gene59750:CDS | 55.0% |
| !! | GGATCCGATTGGTTTGGTCC+TGG | + | chr8.4:57119407-57119426 | MS.gene59750:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 57118968 | 57122493 | 57118968 | ID=MS.gene59750 |
| chr8.4 | mRNA | 57118968 | 57122493 | 57118968 | ID=MS.gene59750.t1;Parent=MS.gene59750 |
| chr8.4 | exon | 57118968 | 57120048 | 57118968 | ID=MS.gene59750.t1.exon1;Parent=MS.gene59750.t1 |
| chr8.4 | CDS | 57118968 | 57120048 | 57118968 | ID=cds.MS.gene59750.t1;Parent=MS.gene59750.t1 |
| chr8.4 | exon | 57120250 | 57120528 | 57120250 | ID=MS.gene59750.t1.exon2;Parent=MS.gene59750.t1 |
| chr8.4 | CDS | 57120250 | 57120528 | 57120250 | ID=cds.MS.gene59750.t1;Parent=MS.gene59750.t1 |
| chr8.4 | exon | 57120650 | 57121573 | 57120650 | ID=MS.gene59750.t1.exon3;Parent=MS.gene59750.t1 |
| chr8.4 | CDS | 57120650 | 57121573 | 57120650 | ID=cds.MS.gene59750.t1;Parent=MS.gene59750.t1 |
| chr8.4 | exon | 57121942 | 57122493 | 57121942 | ID=MS.gene59750.t1.exon4;Parent=MS.gene59750.t1 |
| chr8.4 | CDS | 57121942 | 57122493 | 57121942 | ID=cds.MS.gene59750.t1;Parent=MS.gene59750.t1 |
| Gene Sequence |
| Protein sequence |
