AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59763

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59763.t1 MTR_8g042900 96.392 582 20 1 1 582 1 581 0.0 1161
MS.gene59763.t1 MTR_3g010780 71.870 583 154 4 1 582 1 574 0.0 841
MS.gene59763.t1 MTR_8g023150 48.662 598 272 14 1 582 4 582 4.07e-165 483
MS.gene59763.t1 MTR_4g087980 46.377 483 230 7 110 582 53 516 7.80e-145 429
MS.gene59763.t1 MTR_1g008140 41.935 589 299 16 23 582 33 607 2.10e-144 431
MS.gene59763.t1 MTR_7g112590 41.391 575 301 11 23 571 8 572 8.49e-144 429
MS.gene59763.t1 MTR_1g083510 40.661 605 294 15 17 580 1 581 5.24e-142 424
MS.gene59763.t1 MTR_3g091380 40.995 583 310 13 22 582 27 597 7.90e-140 419
MS.gene59763.t1 MTR_7g050950 43.883 515 272 9 75 582 49 553 9.79e-138 412
MS.gene59763.t1 MTR_2g044880 45.233 451 226 5 142 582 86 525 1.39e-136 408
MS.gene59763.t1 MTR_7g108905 42.582 519 268 9 78 578 46 552 2.40e-135 405
MS.gene59763.t1 MTR_8g104655 48.195 471 203 9 136 582 88 541 1.03e-134 404
MS.gene59763.t1 MTR_7g112580 40.952 525 291 6 66 582 29 542 1.05e-133 401
MS.gene59763.t1 MTR_1g083470 38.070 570 323 10 26 578 10 566 2.92e-133 401
MS.gene59763.t1 MTR_1g083500 38.070 570 323 10 26 578 10 566 2.92e-133 401
MS.gene59763.t1 MTR_8g023310 40.203 592 322 8 15 582 6 589 1.34e-132 400
MS.gene59763.t1 MTR_4g124550 38.564 599 328 16 3 575 2 586 1.96e-132 399
MS.gene59763.t1 MTR_7g050870 43.133 517 274 11 75 582 49 554 9.11e-132 396
MS.gene59763.t1 MTR_8g104645 55.301 349 144 5 242 582 28 372 2.61e-131 389
MS.gene59763.t1 MTR_4g025690 45.455 484 224 12 108 582 61 513 2.82e-131 394
MS.gene59763.t1 MTR_4g087970 43.973 448 225 7 148 582 83 517 3.30e-131 394
MS.gene59763.t1 MTR_1g083490 38.502 574 320 13 26 578 10 571 1.08e-130 395
MS.gene59763.t1 MTR_1g054880 44.622 502 243 12 111 582 62 558 8.56e-130 391
MS.gene59763.t1 MTR_4g025730 45.508 512 246 16 75 582 27 509 1.38e-129 389
MS.gene59763.t1 MTR_4g005170 38.004 571 325 12 27 578 11 571 6.98e-129 392
MS.gene59763.t1 MTR_8g042910 42.086 537 274 9 81 582 78 612 8.80e-127 385
MS.gene59763.t1 MTR_1g088020 45.570 474 224 11 141 582 84 555 1.24e-126 383
MS.gene59763.t1 MTR_4g025670 43.621 486 233 11 114 582 28 489 2.27e-126 380
MS.gene59763.t1 MTR_1g083520 42.344 529 264 11 72 582 23 528 1.20e-125 380
MS.gene59763.t1 MTR_3g010770 40.476 546 276 8 79 582 37 575 3.24e-125 380
MS.gene59763.t1 MTR_2g044810 40.196 510 281 8 75 578 39 530 4.55e-124 376
MS.gene59763.t1 MTR_7g050980 44.295 447 232 8 144 582 118 555 9.18e-124 376
MS.gene59763.t1 MTR_1g088225 45.359 474 223 12 141 582 84 553 3.14e-123 374
MS.gene59763.t1 MTR_7g108875 40.901 555 279 13 62 582 25 564 3.55e-123 375
MS.gene59763.t1 MTR_4g005180 36.898 561 327 11 36 578 2 553 4.55e-123 374
MS.gene59763.t1 MTR_1g086210 38.869 548 291 13 66 578 27 565 1.68e-122 373
MS.gene59763.t1 MTR_1g086190 37.454 542 311 10 56 578 27 559 2.38e-122 372
MS.gene59763.t1 MTR_4g124520 41.700 506 253 9 75 571 38 510 2.88e-122 371
MS.gene59763.t1 MTR_7g053360 41.109 523 270 12 74 582 29 527 1.64e-120 367
MS.gene59763.t1 MTR_7g108900 39.889 539 277 10 78 582 35 560 5.47e-120 366
MS.gene59763.t1 MTR_3g008700 45.125 441 218 9 151 582 102 527 8.78e-119 362
MS.gene59763.t1 MTR_3g008720 45.125 441 218 9 151 582 102 527 1.54e-118 361
MS.gene59763.t1 MTR_3g008640 45.125 441 218 9 151 582 102 527 1.91e-118 361
MS.gene59763.t1 MTR_7g108890 40.850 541 269 14 78 582 37 562 4.83e-118 361
MS.gene59763.t1 MTR_3g033690 41.109 523 269 13 74 582 29 526 6.24e-118 360
MS.gene59763.t1 MTR_4g120280 36.934 574 325 10 24 578 13 568 1.52e-116 358
MS.gene59763.t1 MTR_2g436040 36.042 566 312 12 26 578 14 542 2.43e-115 356
MS.gene59763.t1 MTR_4g120290 35.702 577 328 9 24 578 13 568 2.20e-114 352
MS.gene59763.t1 MTR_7g110440 37.843 547 303 12 64 582 29 566 1.14e-110 343
MS.gene59763.t1 MTR_4g035980 42.605 453 238 9 141 582 98 539 1.14e-110 342
MS.gene59763.t1 MTR_2g436050 36.126 573 320 12 26 578 14 560 5.71e-108 335
MS.gene59763.t1 MTR_7g110490 35.849 583 327 13 27 582 4 566 1.15e-106 332
MS.gene59763.t1 MTR_7g110510 35.849 583 327 13 27 582 4 566 1.15e-106 332
MS.gene59763.t1 MTR_0458s0030 57.692 260 106 1 327 582 55 314 1.09e-105 321
MS.gene59763.t1 MTR_1g088040 57.692 260 106 1 327 582 55 314 1.09e-105 321
MS.gene59763.t1 MTR_7g110560 34.737 570 327 11 26 578 4 545 1.24e-104 326
MS.gene59763.t1 MTR_8g104580 39.698 529 236 14 81 582 28 500 2.32e-104 324
MS.gene59763.t1 MTR_2g044660 48.197 305 156 2 272 575 322 625 4.56e-97 309
MS.gene59763.t1 MTR_7g110420 38.784 477 254 12 143 582 103 578 9.18e-93 296
MS.gene59763.t1 MTR_0618s0020 58.150 227 90 2 361 582 2 228 2.96e-92 283
MS.gene59763.t1 MTR_5g083620 42.000 350 191 8 241 582 11 356 3.26e-89 280
MS.gene59763.t1 MTR_2g044810 50.407 246 118 1 337 578 216 461 6.74e-89 283
MS.gene59763.t1 MTR_8g093460 34.808 520 302 14 75 574 41 543 1.86e-87 282
MS.gene59763.t1 MTR_7g110430 36.559 465 237 9 142 582 102 532 4.11e-87 280
MS.gene59763.t1 MTR_8g088610 41.441 333 181 7 254 578 46 372 2.65e-85 270
MS.gene59763.t1 MTR_3g095920 32.292 576 325 19 27 571 12 553 4.90e-82 268
MS.gene59763.t1 MTR_7g107180 40.705 312 168 7 277 582 7 307 1.19e-69 227
MS.gene59763.t1 MTR_0458s0010 34.167 480 233 14 141 582 84 518 6.63e-68 229
MS.gene59763.t1 MTR_7g111560 31.213 503 300 13 106 580 70 554 2.16e-64 221
MS.gene59763.t1 MTR_2g105560 35.799 338 193 8 256 582 15 339 3.13e-63 211
MS.gene59763.t1 MTR_2g039530 38.941 321 153 9 244 547 22 316 5.25e-55 189
MS.gene59763.t1 MTR_7g102600 32.024 331 202 7 255 571 72 393 4.97e-51 181
MS.gene59763.t1 MTR_6g088810 36.577 298 168 6 285 571 90 377 1.24e-50 179
MS.gene59763.t1 MTR_5g083590 33.333 309 152 5 275 578 5 264 1.87e-50 175
MS.gene59763.t1 MTR_6g012800 33.444 302 182 5 277 568 6 298 2.39e-49 174
MS.gene59763.t1 MTR_6g024165 33.945 327 180 11 261 571 28 334 9.32e-49 173
MS.gene59763.t1 MTR_7g092780 33.770 305 185 6 277 571 90 387 9.53e-49 174
MS.gene59763.t1 MTR_8g102380 35.667 300 170 5 285 571 88 377 1.01e-48 174
MS.gene59763.t1 MTR_6g042660 34.672 274 160 7 277 545 37 296 4.58e-48 171
MS.gene59763.t1 MTR_1g033050 32.704 318 196 5 261 571 2 308 3.38e-47 168
MS.gene59763.t1 MTR_1g086540 31.761 318 193 7 268 571 37 344 6.29e-45 162
MS.gene59763.t1 MTR_7g011530 31.544 298 185 5 279 566 8 296 1.52e-43 158
MS.gene59763.t1 MTR_5g095490 33.775 302 176 7 283 571 67 357 2.54e-43 159
MS.gene59763.t1 MTR_6g042690 34.767 279 158 8 277 545 39 303 7.07e-42 154
MS.gene59763.t1 MTR_5g012600 31.090 312 193 6 277 576 63 364 1.45e-39 148
MS.gene59763.t1 MTR_8g102380 37.500 248 133 5 285 519 88 326 5.07e-39 146
MS.gene59763.t1 MTR_5g093970 31.438 299 189 6 277 571 43 329 1.93e-38 144
MS.gene59763.t1 MTR_2g033970 30.312 320 196 8 264 573 46 348 4.47e-37 141
MS.gene59763.t1 MTR_4g124740 29.268 328 195 12 259 571 34 339 4.95e-37 141
MS.gene59763.t1 MTR_5g088290 30.743 296 189 5 277 571 48 328 8.15e-37 140
MS.gene59763.t1 MTR_5g088280 29.831 295 192 5 277 571 39 318 8.47e-37 140
MS.gene59763.t1 MTR_5g088300 30.169 295 191 4 277 571 37 316 5.74e-35 134
MS.gene59763.t1 MTR_2g436070 30.422 332 198 10 26 348 14 321 5.76e-34 133
MS.gene59763.t1 MTR_8g036225 28.618 304 194 6 277 571 33 322 6.89e-33 129
MS.gene59763.t1 MTR_2g073390 28.947 304 194 8 277 571 71 361 1.89e-31 125
MS.gene59763.t1 MTR_4g074290 28.477 302 198 7 277 571 71 361 3.66e-31 125
MS.gene59763.t1 MTR_4g051810 28.808 302 187 6 277 571 37 317 2.05e-30 122
MS.gene59763.t1 MTR_2g436600 27.726 321 194 11 264 573 45 338 1.26e-28 117
MS.gene59763.t1 MTR_0009s0350 27.152 302 202 7 277 571 71 361 1.25e-27 115
MS.gene59763.t1 MTR_0009s0340 27.152 302 202 7 277 571 71 361 1.25e-27 115
MS.gene59763.t1 MTR_6g025590 34.831 178 105 6 261 430 36 210 6.07e-22 95.5
MS.gene59763.t1 MTR_0408s0030 40.860 93 50 2 453 545 36 123 3.21e-17 79.3
MS.gene59763.t1 MTR_7g102580 38.462 130 55 5 320 430 29 152 2.01e-16 77.0
MS.gene59763.t1 MTR_4g130790 27.755 245 152 7 280 514 25 254 5.91e-16 78.6
MS.gene59763.t1 MTR_8g104765 28.037 214 132 5 29 229 3 207 2.50e-15 75.9
MS.gene59763.t1 MTR_4g120830 27.570 214 124 5 29 229 3 198 1.69e-14 73.2
MS.gene59763.t1 MTR_0036s0140 30.899 178 89 6 76 245 77 228 3.48e-14 72.8
MS.gene59763.t1 MTR_4g120825 27.103 214 125 5 29 229 3 198 1.42e-13 70.5
MS.gene59763.t1 MTR_7g108790 31.492 181 101 7 62 238 29 190 1.48e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59763.t1 AT3G10710 57.093 578 225 10 7 582 5 561 0.0 666
MS.gene59763.t1 AT5G04960 56.410 585 224 9 6 582 3 564 0.0 644
MS.gene59763.t1 AT1G53840 46.154 598 278 14 1 575 4 580 1.58e-161 474
MS.gene59763.t1 AT3G05610 39.255 591 318 12 6 582 2 565 4.18e-145 434
MS.gene59763.t1 AT5G27870 39.796 588 308 10 6 578 2 558 3.12e-144 434
MS.gene59763.t1 AT5G53370 42.295 584 308 13 12 582 18 585 9.15e-143 426
MS.gene59763.t1 AT3G14300 47.002 517 243 12 74 572 456 959 1.95e-142 437
MS.gene59763.t1 AT3G14300 33.984 256 147 7 5 248 9 254 1.68e-28 121
MS.gene59763.t1 AT3G14300 34.503 171 90 5 74 229 268 431 3.67e-15 79.7
MS.gene59763.t1 AT5G53370 42.295 584 308 13 12 582 54 621 2.43e-142 426
MS.gene59763.t1 AT3G43270 46.358 453 228 6 143 582 75 525 4.15e-138 412
MS.gene59763.t1 AT5G49180 43.570 521 266 9 71 572 49 560 1.49e-137 412
MS.gene59763.t1 AT3G05620 40.490 531 279 7 70 582 30 541 3.33e-137 410
MS.gene59763.t1 AT1G11580 41.423 548 297 9 43 582 26 557 4.80e-134 402
MS.gene59763.t1 AT1G11580 41.423 548 297 9 43 582 47 578 1.10e-133 402
MS.gene59763.t1 AT3G49220 40.663 573 313 12 22 582 39 596 2.87e-133 402
MS.gene59763.t1 AT2G26450 37.920 625 328 15 3 582 2 611 4.79e-133 402
MS.gene59763.t1 AT4G33220 41.948 503 256 8 106 582 31 523 1.36e-132 397
MS.gene59763.t1 AT3G49220 40.663 573 313 12 22 582 84 641 2.04e-132 401
MS.gene59763.t1 AT4G33230 39.418 619 322 15 3 582 2 606 4.98e-131 396
MS.gene59763.t1 AT1G53830 42.058 554 277 13 63 582 44 587 8.53e-131 395
MS.gene59763.t1 AT4G02330 42.105 551 270 14 74 582 28 571 4.62e-130 393
MS.gene59763.t1 AT3G14310 40.966 559 274 13 68 582 46 592 1.33e-129 392
MS.gene59763.t1 AT1G23200 43.702 524 252 12 81 575 38 547 1.28e-127 386
MS.gene59763.t1 AT4G33220 52.083 336 149 4 254 582 72 402 4.42e-125 374
MS.gene59763.t1 AT3G06830 38.262 541 308 9 61 582 35 568 5.39e-124 377
MS.gene59763.t1 AT2G47550 44.946 465 227 9 145 582 96 558 7.42e-124 376
MS.gene59763.t1 AT1G02810 39.787 563 280 12 71 582 23 577 1.03e-123 377
MS.gene59763.t1 AT2G26440 40.971 515 273 9 75 571 35 536 2.84e-123 374
MS.gene59763.t1 AT2G45220 44.639 513 246 16 77 582 30 511 5.92e-122 370
MS.gene59763.t1 AT5G51490 41.313 518 269 14 81 582 38 536 3.43e-119 363
MS.gene59763.t1 AT2G43050 42.198 455 235 7 137 582 81 516 1.62e-117 358
MS.gene59763.t1 AT5G51500 40.577 520 284 13 74 582 35 540 5.14e-116 355
MS.gene59763.t1 AT4G03930 43.820 445 231 7 143 582 94 524 3.28e-115 353
MS.gene59763.t1 AT3G60730 41.060 453 220 8 158 582 86 519 9.40e-114 349
MS.gene59763.t1 AT1G11590 42.857 441 235 7 146 582 97 524 3.11e-112 345
MS.gene59763.t1 AT3G10720 37.616 537 296 10 81 582 83 615 9.36e-112 347
MS.gene59763.t1 AT3G27980 44.828 406 204 7 183 582 106 497 1.41e-111 342
MS.gene59763.t1 AT3G59010 42.495 473 243 12 125 582 70 528 1.73e-111 343
MS.gene59763.t1 AT4G02320 38.854 471 251 7 134 582 63 518 1.29e-109 338
MS.gene59763.t1 AT5G04970 40.043 467 248 7 148 582 154 620 2.18e-109 341
MS.gene59763.t1 AT3G47400 37.618 529 305 9 69 582 76 594 1.59e-108 338
MS.gene59763.t1 AT4G02300 39.602 452 252 7 140 578 85 528 3.53e-107 332
MS.gene59763.t1 AT4G00190 37.891 512 265 12 80 582 7 474 8.64e-102 317
MS.gene59763.t1 AT5G20860 37.838 444 248 9 151 582 111 538 3.19e-101 317
MS.gene59763.t1 AT3G62170 33.959 586 328 12 30 571 7 577 6.62e-98 310
MS.gene59763.t1 AT3G10720 52.896 259 118 1 328 582 1 259 5.85e-96 294
MS.gene59763.t1 AT4G15980 45.808 334 175 3 247 574 361 694 4.98e-94 303
MS.gene59763.t1 AT4G15980 32.121 165 98 5 75 234 46 201 2.22e-15 80.1
MS.gene59763.t1 AT2G47040 33.113 604 319 13 29 571 5 584 5.79e-94 300
MS.gene59763.t1 AT4G15980 45.808 334 175 3 247 574 371 704 8.77e-94 303
MS.gene59763.t1 AT4G15980 32.121 165 98 5 75 234 56 211 2.24e-15 80.1
MS.gene59763.t1 AT2G47030 32.998 597 322 13 29 571 5 577 2.75e-92 295
MS.gene59763.t1 AT5G09760 36.023 533 289 14 68 570 36 546 4.62e-89 286
MS.gene59763.t1 AT5G09760 36.023 533 289 14 68 570 62 572 1.57e-88 285
MS.gene59763.t1 AT1G11370 49.206 252 124 1 268 515 37 288 6.07e-85 266
MS.gene59763.t1 AT5G64640 32.709 587 334 16 24 570 32 597 1.08e-83 273
MS.gene59763.t1 AT5G20860 35.116 430 223 8 151 568 111 496 3.68e-82 266
MS.gene59763.t1 AT1G05310 33.443 305 186 5 277 571 91 388 1.56e-52 184
MS.gene59763.t1 AT2G36710 34.528 307 185 5 274 571 86 385 1.77e-49 177
MS.gene59763.t1 AT5G19730 34.754 305 178 6 278 571 87 381 3.41e-48 172
MS.gene59763.t1 AT1G44980 39.184 245 123 3 198 441 23 242 2.05e-45 161
MS.gene59763.t1 AT3G29090 31.683 303 188 4 277 569 7 300 3.11e-44 160
MS.gene59763.t1 AT2G21610 30.293 307 197 6 277 581 51 342 2.33e-43 159
MS.gene59763.t1 AT2G21610 30.293 307 197 6 277 581 56 347 2.81e-43 159
MS.gene59763.t1 AT5G55590 34.528 307 179 7 277 571 82 378 6.32e-43 158
MS.gene59763.t1 AT2G36700 31.667 300 188 5 279 571 44 333 2.49e-42 155
MS.gene59763.t1 AT2G19150 31.908 304 186 6 277 571 41 332 1.26e-40 150
MS.gene59763.t1 AT3G24130 30.968 310 190 7 274 571 31 328 1.73e-40 150
MS.gene59763.t1 AT5G18990 30.968 310 192 6 273 571 25 323 1.87e-40 150
MS.gene59763.t1 AT3G17060 28.618 304 197 6 277 572 46 337 5.10e-40 149
MS.gene59763.t1 AT5G47500 27.855 359 233 7 225 571 13 357 5.91e-40 149
MS.gene59763.t1 AT5G55590 36.111 252 141 6 277 516 82 325 6.82e-38 143
MS.gene59763.t1 AT3G49220 31.503 346 215 10 22 360 84 414 3.39e-37 143
MS.gene59763.t1 AT5G07420 26.923 364 236 8 225 571 5 355 2.90e-35 136
MS.gene59763.t1 AT5G26810 28.617 311 195 6 277 571 34 333 5.36e-35 135
MS.gene59763.t1 AT5G07430 26.027 365 238 8 225 571 5 355 1.29e-34 134
MS.gene59763.t1 AT2G19150 32.932 249 148 5 277 516 41 279 3.87e-34 131
MS.gene59763.t1 AT2G47280 28.896 308 191 7 277 571 35 327 2.35e-32 127
MS.gene59763.t1 AT5G61680 27.632 304 197 7 277 571 69 358 1.44e-30 123
MS.gene59763.t1 AT1G69940 25.926 297 197 7 284 571 73 355 3.53e-28 116
MS.gene59763.t1 AT5G07410 26.014 296 196 7 285 571 74 355 1.13e-27 115
MS.gene59763.t1 AT4G25260 29.293 198 118 6 41 229 10 194 7.62e-12 65.1
MS.gene59763.t1 AT1G62760 30.488 164 93 5 77 229 148 301 7.87e-11 63.9

Find 100 sgRNAs with CRISPR-Local

Find 135 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAACCATGTCTTCCTTTA+AGG 0.044203 8.3:-55382922 None:intergenic
TAAGGACTTGAACTTGAATT+TGG 0.167092 8.3:-55382514 MS.gene59763:CDS
AATTGCAATGTTTCGCCTTT+TGG 0.189029 8.3:-55381056 MS.gene59763:CDS
GACTTTACCATAGGCCTTAA+AGG 0.212569 8.3:+55382908 None:intergenic
ATGAATGTTACTATTGTTTC+TGG 0.218323 8.3:-55381813 MS.gene59763:CDS
GATCAATTGTAAGGATCTTT+TGG 0.225160 8.3:-55382469 MS.gene59763:CDS
AGTTCTGTTAAAACATATTT+AGG 0.227942 8.3:-55381026 MS.gene59763:CDS
ATCTCTTTCAAGTTCAATTA+AGG 0.244852 8.3:-55382703 MS.gene59763:CDS
GAAATTCCTGTGTTCATGTT+AGG 0.284061 8.3:+55381086 None:intergenic
GGATTTATTATGAAAATGTT+AGG 0.293225 8.3:-55381878 MS.gene59763:CDS
GAAACTTGGTTGAGTGCTTC+AGG 0.293398 8.3:-55382369 MS.gene59763:intron
CCACTTGACCCTATTCTTCA+TGG 0.298592 8.3:+55380854 None:intergenic
TTGAATAGCTCTTTGTCTAA+TGG 0.299600 8.3:-55382429 MS.gene59763:CDS
GTTTAATATTCAGCTGTCTT+TGG 0.316895 8.3:-55381407 MS.gene59763:intron
TTAGGGTGGAAAAGACTAAA+TGG 0.331655 8.3:-55381860 MS.gene59763:CDS
CCTTAGTCCTCTTGTTCAAC+CGG 0.337493 8.3:-55382637 MS.gene59763:CDS
AAATGGAATGTCATGATAAT+TGG 0.339952 8.3:-55381843 MS.gene59763:CDS
TACCAGCAAACATGCATTGA+TGG 0.346136 8.3:-55382239 MS.gene59763:CDS
TTCGAACTTCGAACATGGCT+TGG 0.346240 8.3:+55382874 None:intergenic
TACCGTGAATGCAACATATA+CGG 0.353401 8.3:-55381224 MS.gene59763:CDS
AGCTCATAAGTTTACAGTTA+AGG 0.369384 8.3:-55380802 MS.gene59763:CDS
GTTATTGTGTTCTGCTGTCC+TGG 0.383824 8.3:+55381128 None:intergenic
GATAGATGGATCCCTGCTTC+TGG 0.385161 8.3:-55380765 MS.gene59763:CDS
TTCCGTATATGTTGCATTCA+CGG 0.389369 8.3:+55381222 None:intergenic
AACCATCAATGCATGTTTGC+TGG 0.390697 8.3:+55382237 None:intergenic
TCTTTATGATGAAGCCAGTT+TGG 0.390868 8.3:+55382053 None:intergenic
TCAGCATAGAATATAGTATC+TGG 0.393977 8.3:+55380903 None:intergenic
GGAAGCTTTGATCAATTGTA+AGG 0.395095 8.3:-55382478 MS.gene59763:CDS
TCGAACTTCGAACATGGCTT+GGG 0.401179 8.3:+55382875 None:intergenic
TATGCTGAATTTCAGAATGT+TGG 0.408953 8.3:-55380888 MS.gene59763:CDS
ATGTCTTCCTTTAAGGCCTA+TGG 0.419251 8.3:-55382915 MS.gene59763:CDS
GCTTAACAAGGCTGCATCTT+CGG 0.420371 8.3:-55382120 MS.gene59763:CDS
ATCAAAATGAAGAACCAAAC+TGG 0.433147 8.3:-55382067 MS.gene59763:CDS
GTGGTGCTTCCATGAAGAAT+AGG 0.438477 8.3:-55380863 MS.gene59763:CDS
ACCCAAGGTAACCATCCATT+TGG 0.439713 8.3:+55380939 None:intergenic
ACCGTGATCTATGTGAAGAA+AGG 0.447852 8.3:-55381900 MS.gene59763:CDS
TTGTCCACAATTGTCCTCAT+TGG 0.452200 8.3:-55382819 MS.gene59763:CDS
GTGTTCTGCTGTCCTGGCAT+AGG 0.453171 8.3:+55381134 None:intergenic
TCCAAATGGATGGTTACCTT+GGG 0.459205 8.3:-55380940 MS.gene59763:CDS
AGTGTTTATGCAATCCAACT+TGG 0.459622 8.3:-55380976 MS.gene59763:CDS
ACTAATAAAATCTCCCAAGT+TGG 0.461379 8.3:+55380962 None:intergenic
GTCCAAATGGATGGTTACCT+TGG 0.461469 8.3:-55380941 MS.gene59763:CDS
AAGCACTCAACCAAGTTTCA+AGG 0.464276 8.3:+55382373 None:intergenic
AATTTCATTGCAAGAGACAT+AGG 0.476516 8.3:-55381380 MS.gene59763:CDS
TCCCTAATAAAAGTGACAAT+AGG 0.479786 8.3:-55381923 MS.gene59763:CDS
TTAAATGTAGCACCAGAAGC+AGG 0.483273 8.3:+55380753 None:intergenic
ACAGAACTCAAGTTTCCAAA+AGG 0.483952 8.3:+55381041 None:intergenic
TGGTGCTTCCATGAAGAATA+GGG 0.495686 8.3:-55380862 MS.gene59763:CDS
TTGTCGCGAAAGACGGGAGT+GGG 0.497689 8.3:-55381980 MS.gene59763:CDS
GATTTATTATGAAAATGTTA+GGG 0.500256 8.3:-55381877 MS.gene59763:CDS
AAACATATTTAGGTAGACCT+TGG 0.501761 8.3:-55381016 MS.gene59763:CDS
CCGTGATCTATGTGAAGAAA+GGG 0.502068 8.3:-55381899 MS.gene59763:CDS
GTTGTTGAGTAATTCTTCCA+AGG 0.510500 8.3:+55380999 None:intergenic
CAGAACACAATAACAGCACA+AGG 0.511799 8.3:-55381119 MS.gene59763:CDS
GACAATTTGAACAATTCCTC+GGG 0.512188 8.3:+55382600 None:intergenic
TGTCCTGGCATAGGTTGTCT+TGG 0.512818 8.3:+55381143 None:intergenic
CGACAATTTGAACAATTCCT+CGG 0.517268 8.3:+55382599 None:intergenic
ACATTGTTGTCGCGAAAGAC+GGG 0.518230 8.3:-55381986 MS.gene59763:CDS
AATGGATGGTTACCTTGGGT+TGG 0.521909 8.3:-55380936 MS.gene59763:CDS
GACATTGTTGTCGCGAAAGA+CGG 0.522332 8.3:-55381987 MS.gene59763:CDS
GTTCAAATTGTCGATTCAAG+TGG 0.529858 8.3:-55382589 MS.gene59763:CDS
AATAGCTCTTTGTCTAATGG+AGG 0.533210 8.3:-55382426 MS.gene59763:CDS
TGCTGACCCGGTTGAACAAG+AGG 0.534157 8.3:+55382630 None:intergenic
TCGGGTCGTATTTGCTGACC+CGG 0.534760 8.3:+55382618 None:intergenic
TTTCCTTCGAACTTCGAACA+TGG 0.537460 8.3:+55382869 None:intergenic
GAAGAATAGGGTCAAGTGGA+AGG 0.538939 8.3:-55380850 MS.gene59763:CDS
TTGTCATTAGTGCTACTGCT+TGG 0.546362 8.3:+55381327 None:intergenic
TTATTATGAAAATGTTAGGG+TGG 0.548237 8.3:-55381874 MS.gene59763:CDS
CTTGTTAAGCCATGTGATGA+TGG 0.554658 8.3:+55382133 None:intergenic
AATGTTGCTGTTGAAAATGT+TGG 0.554684 8.3:+55381765 None:intergenic
ACGAGCATTGTTGTGAGCAA+CGG 0.555809 8.3:+55382770 None:intergenic
TCAAGTCCTTAAAAGTTCCA+TGG 0.556946 8.3:+55382526 None:intergenic
GTGTTTATGCAATCCAACTT+GGG 0.557437 8.3:-55380975 MS.gene59763:CDS
CTTAGTCCTCTTGTTCAACC+GGG 0.562802 8.3:-55382636 MS.gene59763:CDS
CCCTTTCTTCACATAGATCA+CGG 0.563259 8.3:+55381899 None:intergenic
GCTGAATTTCAGAATGTTGG+AGG 0.563580 8.3:-55380885 MS.gene59763:CDS
GTCTTTCGCGACAACAATGT+CGG 0.565235 8.3:+55381989 None:intergenic
GTTGTCGCGAAAGACGGGAG+TGG 0.565313 8.3:-55381981 MS.gene59763:CDS
TTGTGATGTTACATTGTACA+AGG 0.567974 8.3:-55382676 MS.gene59763:CDS
TGATTCGTCGACTTTACCAT+AGG 0.568245 8.3:+55382899 None:intergenic
CATCATCACATGGCTTAACA+AGG 0.570892 8.3:-55382132 MS.gene59763:CDS
GCATTAACTGCAGTTTCGAA+AGG 0.570948 8.3:-55382567 MS.gene59763:CDS
TTACCAAGACAACCTATGCC+AGG 0.573972 8.3:-55381146 MS.gene59763:CDS
ATAGGCTTTAAGAACACAGC+TGG 0.577241 8.3:-55381362 MS.gene59763:CDS
CCGGTTGAACAAGAGGACTA+AGG 0.579986 8.3:+55382637 None:intergenic
GATACCAATGAGGACAATTG+TGG 0.590032 8.3:+55382815 None:intergenic
GTTCAGTATTTATCTGACCA+TGG 0.597410 8.3:-55382543 MS.gene59763:CDS
ATAGCTCTTTGTCTAATGGA+GGG 0.604523 8.3:-55382425 MS.gene59763:CDS
CCATGAAGAATAGGGTCAAG+TGG 0.608609 8.3:-55380854 MS.gene59763:CDS
AATGTCATGATAATTGGTGA+TGG 0.609478 8.3:-55381837 MS.gene59763:CDS
AAGAATAGGGTCAAGTGGAA+GGG 0.609533 8.3:-55380849 MS.gene59763:CDS
AAGCCATGTTCGAAGTTCGA+AGG 0.613588 8.3:-55382872 MS.gene59763:CDS
GAATTTCAGAATGTTGGAGG+TGG 0.614077 8.3:-55380882 MS.gene59763:CDS
TAAATGTAGCACCAGAAGCA+GGG 0.630712 8.3:+55380754 None:intergenic
ACAGTCTTGCCATCATCACA+TGG 0.638538 8.3:-55382142 MS.gene59763:CDS
GAATTTGGATAATAGAACAA+AGG 0.642422 8.3:-55382499 MS.gene59763:CDS
ATAGGCCTTAAAGGAAGACA+TGG 0.648840 8.3:+55382917 None:intergenic
GGTGCAGAATCTCCAACCCA+AGG 0.653495 8.3:+55380924 None:intergenic
AATGATCCTAACATGAACAC+AGG 0.657498 8.3:-55381092 MS.gene59763:CDS
GGGTCAGCAAATACGACCCG+AGG 0.685682 8.3:-55382616 MS.gene59763:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTACTTAATTTCAATTTAA+AGG + chr8.3:55381932-55381951 None:intergenic 10.0%
!!! AATTATATACAACATTTTTT+TGG - chr8.3:55381949-55381968 MS.gene59763:CDS 10.0%
!! GATTTATTATGAAAATGTTA+GGG - chr8.3:55381778-55381797 MS.gene59763:CDS 15.0%
!!! AATTTATTGTTTCTTTTCTT+TGG - chr8.3:55382226-55382245 MS.gene59763:CDS 15.0%
!!! TTTTACAATTAATTCTTTGT+TGG + chr8.3:55382167-55382186 None:intergenic 15.0%
!! AGTTCTGTTAAAACATATTT+AGG - chr8.3:55382629-55382648 MS.gene59763:CDS 20.0%
!! GGATTTATTATGAAAATGTT+AGG - chr8.3:55381777-55381796 MS.gene59763:CDS 20.0%
! AAATGGAATGTCATGATAAT+TGG - chr8.3:55381812-55381831 MS.gene59763:CDS 25.0%
! ATGAATGTTACTATTGTTTC+TGG - chr8.3:55381842-55381861 MS.gene59763:CDS 25.0%
! GAATTTGGATAATAGAACAA+AGG - chr8.3:55381156-55381175 MS.gene59763:CDS 25.0%
! TTATTATGAAAATGTTAGGG+TGG - chr8.3:55381781-55381800 MS.gene59763:CDS 25.0%
!! ATCAATTGTAAGGATCTTTT+GGG - chr8.3:55381187-55381206 MS.gene59763:CDS 25.0%
!! ATTTTATTAGTCCAAATGGA+TGG - chr8.3:55382705-55382724 MS.gene59763:CDS 25.0%
!! GGAAGTCTTAATTTTATAGA+TGG - chr8.3:55381863-55381882 MS.gene59763:CDS 25.0%
!!! ATCTCTTTCAAGTTCAATTA+AGG - chr8.3:55380952-55380971 MS.gene59763:CDS 25.0%
!!! TCCTATTGTCACTTTTATTA+GGG + chr8.3:55381736-55381755 None:intergenic 25.0%
AAACATATTTAGGTAGACCT+TGG - chr8.3:55382639-55382658 MS.gene59763:CDS 30.0%
AATGTCATGATAATTGGTGA+TGG - chr8.3:55381818-55381837 MS.gene59763:CDS 30.0%
AATTTCATTGCAAGAGACAT+AGG - chr8.3:55382275-55382294 MS.gene59763:intron 30.0%
ACTAATAAAATCTCCCAAGT+TGG + chr8.3:55382696-55382715 None:intergenic 30.0%
AGCTCATAAGTTTACAGTTA+AGG - chr8.3:55382853-55382872 MS.gene59763:CDS 30.0%
AGTACCTGTATGATATATGT+AGG + chr8.3:55381396-55381415 None:intergenic 30.0%
ATCAAAATGAAGAACCAAAC+TGG - chr8.3:55381588-55381607 MS.gene59763:intron 30.0%
GTATAAATTAACTTATGCCG+AGG + chr8.3:55381362-55381381 None:intergenic 30.0%
GTTTAATATTCAGCTGTCTT+TGG - chr8.3:55382248-55382267 MS.gene59763:intron 30.0%
TAAGGACTTGAACTTGAATT+TGG - chr8.3:55381141-55381160 MS.gene59763:CDS 30.0%
TATGCTGAATTTCAGAATGT+TGG - chr8.3:55382767-55382786 MS.gene59763:CDS 30.0%
TCAGCATAGAATATAGTATC+TGG + chr8.3:55382755-55382774 None:intergenic 30.0%
TCCCTAATAAAAGTGACAAT+AGG - chr8.3:55381732-55381751 MS.gene59763:intron 30.0%
TTCTCCTACATATATCATAC+AGG - chr8.3:55381389-55381408 MS.gene59763:CDS 30.0%
TTGAATAGCTCTTTGTCTAA+TGG - chr8.3:55381226-55381245 MS.gene59763:CDS 30.0%
TTGTGATGTTACATTGTACA+AGG - chr8.3:55380979-55380998 MS.gene59763:CDS 30.0%
! AATGTTGCTGTTGAAAATGT+TGG + chr8.3:55381893-55381912 None:intergenic 30.0%
! ACAGTTAAGGCTTTTCTTAA+CGG - chr8.3:55382866-55382885 MS.gene59763:CDS 30.0%
! ACATTTTCAACAGCAACATT+TGG - chr8.3:55381893-55381912 MS.gene59763:CDS 30.0%
! AGCTATAAATTTTGTGCATC+TGG + chr8.3:55382101-55382120 None:intergenic 30.0%
! AGTTTTCTACAAATGTTCGA+TGG - chr8.3:55382364-55382383 MS.gene59763:intron 30.0%
! GATCAATTGTAAGGATCTTT+TGG - chr8.3:55381186-55381205 MS.gene59763:CDS 30.0%
! GCTATAAATTTTGTGCATCT+GGG + chr8.3:55382100-55382119 None:intergenic 30.0%
! GGAGATTTTATTAGTCCAAA+TGG - chr8.3:55382701-55382720 MS.gene59763:CDS 30.0%
! GTCTTCTTTTCTTGATGTTT+TGG - chr8.3:55381255-55381274 MS.gene59763:CDS 30.0%
!! GGAACAGTTGATTTCATTTT+CGG - chr8.3:55382452-55382471 MS.gene59763:CDS 30.0%
!! TTCTTTTCTTGATGTTTTGG+AGG - chr8.3:55381258-55381277 MS.gene59763:CDS 30.0%
!!! GTCCTATTGTCACTTTTATT+AGG + chr8.3:55381737-55381756 None:intergenic 30.0%
!!! TTCTGTAGAGTTTTTGAGAT+TGG + chr8.3:55381483-55381502 None:intergenic 30.0%
AATAGCTCTTTGTCTAATGG+AGG - chr8.3:55381229-55381248 MS.gene59763:CDS 35.0%
AATGATCCTAACATGAACAC+AGG - chr8.3:55382563-55382582 MS.gene59763:CDS 35.0%
ACAGAACTCAAGTTTCCAAA+AGG + chr8.3:55382617-55382636 None:intergenic 35.0%
AGCTTAAAATCTAGACCGTA+TGG - chr8.3:55382021-55382040 MS.gene59763:CDS 35.0%
AGTGTTTATGCAATCCAACT+TGG - chr8.3:55382679-55382698 MS.gene59763:CDS 35.0%
ATAGCTCTTTGTCTAATGGA+GGG - chr8.3:55381230-55381249 MS.gene59763:CDS 35.0%
CGACAATTTGAACAATTCCT+CGG + chr8.3:55381059-55381078 None:intergenic 35.0%
GAAATTCCTGTGTTCATGTT+AGG + chr8.3:55382572-55382591 None:intergenic 35.0%
GACAATTTGAACAATTCCTC+GGG + chr8.3:55381058-55381077 None:intergenic 35.0%
GTATGCAATATATTCGTCCT+CGG - chr8.3:55381342-55381361 MS.gene59763:CDS 35.0%
GTGTTTATGCAATCCAACTT+GGG - chr8.3:55382680-55382699 MS.gene59763:CDS 35.0%
GTTCAGTATTTATCTGACCA+TGG - chr8.3:55381112-55381131 MS.gene59763:CDS 35.0%
GTTGTTGAGTAATTCTTCCA+AGG + chr8.3:55382659-55382678 None:intergenic 35.0%
TAAAATCTAGACCGTATGGT+CGG - chr8.3:55382025-55382044 MS.gene59763:CDS 35.0%
TACCGTGAATGCAACATATA+CGG - chr8.3:55382431-55382450 MS.gene59763:CDS 35.0%
TCAAGTCCTTAAAAGTTCCA+TGG + chr8.3:55381132-55381151 None:intergenic 35.0%
TCTTTATGATGAAGCCAGTT+TGG + chr8.3:55381605-55381624 None:intergenic 35.0%
TTAGGGTGGAAAAGACTAAA+TGG - chr8.3:55381795-55381814 MS.gene59763:CDS 35.0%
TTCCGTATATGTTGCATTCA+CGG + chr8.3:55382436-55382455 None:intergenic 35.0%
! AATTGCAATGTTTCGCCTTT+TGG - chr8.3:55382599-55382618 MS.gene59763:CDS 35.0%
! ATCTGACCATGGAACTTTTA+AGG - chr8.3:55381123-55381142 MS.gene59763:CDS 35.0%
! CTTTTCTTAACGGAGATAGA+TGG - chr8.3:55382876-55382895 MS.gene59763:CDS 35.0%
! GGAAGCTTTGATCAATTGTA+AGG - chr8.3:55381177-55381196 MS.gene59763:CDS 35.0%
! TACGGTCTAGATTTTAAGCT+CGG + chr8.3:55382021-55382040 None:intergenic 35.0%
!! GTTCAAATTGTCGATTCAAG+TGG - chr8.3:55381066-55381085 MS.gene59763:CDS 35.0%
!! GTTGCAGTTTTGTAATACGA+CGG + chr8.3:55382486-55382505 None:intergenic 35.0%
AACCATCAATGCATGTTTGC+TGG + chr8.3:55381421-55381440 None:intergenic 40.0%
AAGAATAGGGTCAAGTGGAA+GGG - chr8.3:55382806-55382825 MS.gene59763:CDS 40.0%
AAGCACTCAACCAAGTTTCA+AGG + chr8.3:55381285-55381304 None:intergenic 40.0%
ACCGTGATCTATGTGAAGAA+AGG - chr8.3:55381755-55381774 MS.gene59763:intron 40.0%
CAGAACACAATAACAGCACA+AGG - chr8.3:55382536-55382555 MS.gene59763:CDS 40.0%
CATCATCACATGGCTTAACA+AGG - chr8.3:55381523-55381542 MS.gene59763:intron 40.0%
CCCTTTCTTCACATAGATCA+CGG + chr8.3:55381759-55381778 None:intergenic 40.0%
CCGTGATCTATGTGAAGAAA+GGG - chr8.3:55381756-55381775 MS.gene59763:intron 40.0%
CTGCAAAAACGATACCAATG+AGG + chr8.3:55380853-55380872 None:intergenic 40.0%
CTTGTTAAGCCATGTGATGA+TGG + chr8.3:55381525-55381544 None:intergenic 40.0%
GAATTTCAGAATGTTGGAGG+TGG - chr8.3:55382773-55382792 MS.gene59763:CDS 40.0%
GACTTTACCATAGGCCTTAA+AGG + chr8.3:55380750-55380769 None:intergenic 40.0%
GATACCAATGAGGACAATTG+TGG + chr8.3:55380843-55380862 None:intergenic 40.0%
GCATTAACTGCAGTTTCGAA+AGG - chr8.3:55381088-55381107 MS.gene59763:CDS 40.0%
GCTGAATTTCAGAATGTTGG+AGG - chr8.3:55382770-55382789 MS.gene59763:CDS 40.0%
TAAATGTAGCACCAGAAGCA+GGG + chr8.3:55382904-55382923 None:intergenic 40.0%
TACATGCAGACTGACATATC+AGG + chr8.3:55382052-55382071 None:intergenic 40.0%
TACCAGCAAACATGCATTGA+TGG - chr8.3:55381416-55381435 MS.gene59763:intron 40.0%
TCCAAATGGATGGTTACCTT+GGG - chr8.3:55382715-55382734 MS.gene59763:CDS 40.0%
TGGTGCTTCCATGAAGAATA+GGG - chr8.3:55382793-55382812 MS.gene59763:CDS 40.0%
TTAAATGTAGCACCAGAAGC+AGG + chr8.3:55382905-55382924 None:intergenic 40.0%
TTGTCCACAATTGTCCTCAT+TGG - chr8.3:55380836-55380855 MS.gene59763:CDS 40.0%
TTTCCTTCGAACTTCGAACA+TGG + chr8.3:55380789-55380808 None:intergenic 40.0%
! TTGTCATTAGTGCTACTGCT+TGG + chr8.3:55382331-55382350 None:intergenic 40.0%
!! ATAGGCTTTAAGAACACAGC+TGG - chr8.3:55382293-55382312 MS.gene59763:intron 40.0%
!! ATGTCTTCCTTTAAGGCCTA+TGG - chr8.3:55380740-55380759 MS.gene59763:CDS 40.0%
!! CATTGGTATCGTTTTTGCAG+CGG - chr8.3:55380853-55380872 MS.gene59763:CDS 40.0%
!! TGATTCGTCGACTTTACCAT+AGG + chr8.3:55380759-55380778 None:intergenic 40.0%
!! TTTTGGAGGACCTTGAAACT+TGG - chr8.3:55381272-55381291 MS.gene59763:CDS 40.0%
AAGCCATGTTCGAAGTTCGA+AGG - chr8.3:55380783-55380802 MS.gene59763:CDS 45.0%
AATGGATGGTTACCTTGGGT+TGG - chr8.3:55382719-55382738 MS.gene59763:CDS 45.0%
ACAGTCTTGCCATCATCACA+TGG - chr8.3:55381513-55381532 MS.gene59763:intron 45.0%
ACATATCAGGACCGACCATA+CGG + chr8.3:55382039-55382058 None:intergenic 45.0%
ACATTGTTGTCGCGAAAGAC+GGG - chr8.3:55381669-55381688 MS.gene59763:intron 45.0%
ACCCAAGGTAACCATCCATT+TGG + chr8.3:55382719-55382738 None:intergenic 45.0%
CCACTTGACCCTATTCTTCA+TGG + chr8.3:55382804-55382823 None:intergenic 45.0%
CCATGAAGAATAGGGTCAAG+TGG - chr8.3:55382801-55382820 MS.gene59763:CDS 45.0%
CCTTAGTCCTCTTGTTCAAC+CGG - chr8.3:55381018-55381037 MS.gene59763:CDS 45.0%
CTTAGTCCTCTTGTTCAACC+GGG - chr8.3:55381019-55381038 MS.gene59763:CDS 45.0%
GAAACTTGGTTGAGTGCTTC+AGG - chr8.3:55381286-55381305 MS.gene59763:CDS 45.0%
GAAGAATAGGGTCAAGTGGA+AGG - chr8.3:55382805-55382824 MS.gene59763:CDS 45.0%
GACATTGTTGTCGCGAAAGA+CGG - chr8.3:55381668-55381687 MS.gene59763:intron 45.0%
GCTTAACAAGGCTGCATCTT+CGG - chr8.3:55381535-55381554 MS.gene59763:intron 45.0%
GTCCAAATGGATGGTTACCT+TGG - chr8.3:55382714-55382733 MS.gene59763:CDS 45.0%
GTCTTTCGCGACAACAATGT+CGG + chr8.3:55381669-55381688 None:intergenic 45.0%
GTGGTGCTTCCATGAAGAAT+AGG - chr8.3:55382792-55382811 MS.gene59763:CDS 45.0%
GTTATTGTGTTCTGCTGTCC+TGG + chr8.3:55382530-55382549 None:intergenic 45.0%
TCGAACTTCGAACATGGCTT+GGG + chr8.3:55380783-55380802 None:intergenic 45.0%
TTACCAAGACAACCTATGCC+AGG - chr8.3:55382509-55382528 MS.gene59763:CDS 45.0%
TTCGAACTTCGAACATGGCT+TGG + chr8.3:55380784-55380803 None:intergenic 45.0%
! ACGAGCATTGTTGTGAGCAA+CGG + chr8.3:55380888-55380907 None:intergenic 45.0%
!! ATCGTTTTTGCAGCGGTGTT+TGG - chr8.3:55380860-55380879 MS.gene59763:CDS 45.0%
!!! GCTACTGCTTGGTGTTTTTG+TGG + chr8.3:55382320-55382339 None:intergenic 45.0%
CCGGTTGAACAAGAGGACTA+AGG + chr8.3:55381021-55381040 None:intergenic 50.0%
GATAGATGGATCCCTGCTTC+TGG - chr8.3:55382890-55382909 MS.gene59763:CDS 50.0%
TCAGTCTGCATGTAGTCACG+AGG - chr8.3:55382058-55382077 MS.gene59763:CDS 50.0%
TGTCCTGGCATAGGTTGTCT+TGG + chr8.3:55382515-55382534 None:intergenic 50.0%
GGTGCAGAATCTCCAACCCA+AGG + chr8.3:55382734-55382753 None:intergenic 55.0%
GTGTTCTGCTGTCCTGGCAT+AGG + chr8.3:55382524-55382543 None:intergenic 55.0%
TGCTGACCCGGTTGAACAAG+AGG + chr8.3:55381028-55381047 None:intergenic 55.0%
TTGTCGCGAAAGACGGGAGT+GGG - chr8.3:55381675-55381694 MS.gene59763:intron 55.0%
! TCGGGTCGTATTTGCTGACC+CGG + chr8.3:55381040-55381059 None:intergenic 55.0%
GGGTCAGCAAATACGACCCG+AGG - chr8.3:55381039-55381058 MS.gene59763:CDS 60.0%
GTTGTCGCGAAAGACGGGAG+TGG - chr8.3:55381674-55381693 MS.gene59763:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 55380740 55382937 55380740 ID=MS.gene59763
chr8.3 mRNA 55380740 55382937 55380740 ID=MS.gene59763.t1;Parent=MS.gene59763
chr8.3 exon 55382370 55382937 55382370 ID=MS.gene59763.t1.exon1;Parent=MS.gene59763.t1
chr8.3 CDS 55382370 55382937 55382370 ID=cds.MS.gene59763.t1;Parent=MS.gene59763.t1
chr8.3 exon 55381763 55382266 55381763 ID=MS.gene59763.t1.exon2;Parent=MS.gene59763.t1
chr8.3 CDS 55381763 55382266 55381763 ID=cds.MS.gene59763.t1;Parent=MS.gene59763.t1
chr8.3 exon 55380740 55381416 55380740 ID=MS.gene59763.t1.exon3;Parent=MS.gene59763.t1
chr8.3 CDS 55380740 55381416 55380740 ID=cds.MS.gene59763.t1;Parent=MS.gene59763.t1
Gene Sequence

>MS.gene59763

ATGTCTTCCTTTAAGGCCTATGGTAAAGTCGACGAATCAGCCCAAGCCATGTTCGAAGTTCGAAGGAAATCACGAAAGCGAATAACTATCATAAGCTTGTCCACAATTGTCCTCATTGGTATCGTTTTTGCAGCGGTGTTTGGAACCGTTGCTCACAACAATGCTCGTAATGATGACAACAACAACAACAACAATAATGATAACGATGATCAATCTCTTTCAAGTTCAATTAAGGCTGTTTGTGATGTTACATTGTACAAGGATTCATGTGAAAGCAGCCTTAGTCCTCTTGTTCAACCGGGTCAGCAAATACGACCCGAGGAATTGTTCAAATTGTCGATTCAAGTGGCATTAACTGCAGTTTCGAAAGGTGTTCAGTATTTATCTGACCATGGAACTTTTAAGGACTTGAACTTGAATTTGGATAATAGAACAAAGGAAGCTTTGATCAATTGTAAGGATCTTTTGGGTCTTGCTGTTGATCATTTGAATAGCTCTTTGTCTAATGGAGGGAAGTCTTCTTTTCTTGATGTTTTGGAGGACCTTGAAACTTGGTTGAGTGCTTCAGGTAAACTTTATAATTAAGCATTTATATACTTTTTGTATGCAATATATTCGTCCTCGGCATAAGTTAATTTATACTTTATAATTCTCCTACATATATCATACAGGTACTTACCAGCAAACATGCATTGATGGTTTAGAACAAGCAGAAGAAGCATTAAAGTTTAGTATTACAACCAATCTCAAAAACTCTACAGAATTTACGAGCAACAGTCTTGCCATCATCACATGGCTTAACAAGGCTGCATCTTCGGTGAACTTTAGACGCTTATTGAGTTTATCGCATCAAAATGAAGAACCAAACTGGCTTCATCATAAAGACAGAAAGTTACTTCAAAAAGACACTGATTTGAAGAAGAAAGCCGACATTGTTGTCGCGAAAGACGGGAGTGGGAAATACAAAACAATTTCAGCTGCATTGAAACATGTCCCTAATAAAAGTGACAATAGGACCGTGATCTATGTGAAGAAAGGGATTTATTATGAAAATGTTAGGGTGGAAAAGACTAAATGGAATGTCATGATAATTGGTGATGGAATGAATGTTACTATTGTTTCTGGAAGTCTTAATTTTATAGATGGCACACCAACATTTTCAACAGCAACATTTGGTATGTCAAACTTTCCTTTAAATTGAAATTAAGTAATTATATACAACATTTTTTTGGTTCAGATTTCAATGCTGACTTTTTATAATTTTTTAGAATTAAAACACCGAGCTTAAAATCTAGACCGTATGGTCGGTCCTGATATGTCAGTCTGCATGTAGTCACGAGGTTGTGAATGCACACAACCCAGATGCACAAAATTTATAGCTATTCTATTTCTTTTAGCGTATCAATTTGAAAACTTCTTTTTCTCCAACAAAGAATTAATTGTAAAAAATCTTTTAACATGATTTATAAAACTATCTAACTATATTAATTTATTGTTTCTTTTCTTTGGTTTAATATTCAGCTGTCTTTGGAAGAAATTTCATTGCAAGAGACATAGGCTTTAAGAACACAGCTGGTCCACAAAAACACCAAGCAGTAGCACTAATGACAAGTGCAGATCAAGCAGTTTTCTACAAATGTTCGATGGATGCATATCAAGACACACTCTACGCTCACTCAAATCGTCAATTCTACCGTGAATGCAACATATACGGAACAGTTGATTTCATTTTCGGAAACTCAGCCGTCGTATTACAAAACTGCAACATTTTACCAAGACAACCTATGCCAGGACAGCAGAACACAATAACAGCACAAGGCAAAAATGATCCTAACATGAACACAGGAATTTCAATTCAAAATTGCAATGTTTCGCCTTTTGGAAACTTGAGTTCTGTTAAAACATATTTAGGTAGACCTTGGAAGAATTACTCAACAACAGTGTTTATGCAATCCAACTTGGGAGATTTTATTAGTCCAAATGGATGGTTACCTTGGGTTGGAGATTCTGCACCAGATACTATATTCTATGCTGAATTTCAGAATGTTGGAGGTGGTGCTTCCATGAAGAATAGGGTCAAGTGGAAGGGTTTGAAAACTATTACAAGTAAACAAGCTCATAAGTTTACAGTTAAGGCTTTTCTTAACGGAGATAGATGGATCCCTGCTTCTGGTGCTACATTTAAATCTTCTCTGTAA
Protein sequence

>MS.gene59763.t1

MSSFKAYGKVDESAQAMFEVRRKSRKRITIISLSTIVLIGIVFAAVFGTVAHNNARNDDNNNNNNNDNDDQSLSSSIKAVCDVTLYKDSCESSLSPLVQPGQQIRPEELFKLSIQVALTAVSKGVQYLSDHGTFKDLNLNLDNRTKEALINCKDLLGLAVDHLNSSLSNGGKSSFLDVLEDLETWLSASGTYQQTCIDGLEQAEEALKFSITTNLKNSTEFTSNSLAIITWLNKAASSVNFRRLLSLSHQNEEPNWLHHKDRKLLQKDTDLKKKADIVVAKDGSGKYKTISAALKHVPNKSDNRTVIYVKKGIYYENVRVEKTKWNVMIIGDGMNVTIVSGSLNFIDGTPTFSTATFAVFGRNFIARDIGFKNTAGPQKHQAVALMTSADQAVFYKCSMDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNILPRQPMPGQQNTITAQGKNDPNMNTGISIQNCNVSPFGNLSSVKTYLGRPWKNYSTTVFMQSNLGDFISPNGWLPWVGDSAPDTIFYAEFQNVGGGASMKNRVKWKGLKTITSKQAHKFTVKAFLNGDRWIPASGATFKSSL