Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59887.t1 | XP_013445265.1 | 96.2 | 683 | 26 | 0 | 1 | 683 | 12 | 694 | 0.00E+00 | 1337.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59887.t1 | Q39128 | 59.3 | 664 | 248 | 6 | 11 | 674 | 33 | 674 | 5.5e-220 | 765.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59887.t1 | A0A072TQ05 | 96.2 | 683 | 26 | 0 | 1 | 683 | 12 | 694 | 0.0e+00 | 1337.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052077 | MS.gene59887 | 0.811869 | 5.64E-51 | -1.69E-46 |
| MS.gene053494 | MS.gene59887 | 0.803949 | 2.73E-49 | -1.69E-46 |
| MS.gene059876 | MS.gene59887 | 0.80418 | 2.44E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59887.t1 | MTR_8g446430 | 96.193 | 683 | 26 | 0 | 1 | 683 | 12 | 694 | 0.0 | 1373 |
| MS.gene59887.t1 | MTR_2g019530 | 57.106 | 767 | 244 | 7 | 2 | 683 | 13 | 779 | 0.0 | 844 |
| MS.gene59887.t1 | MTR_4g113530 | 58.861 | 474 | 191 | 2 | 9 | 480 | 26 | 497 | 0.0 | 583 |
| MS.gene59887.t1 | MTR_8g046440 | 98.905 | 274 | 3 | 0 | 200 | 473 | 10 | 283 | 0.0 | 565 |
| MS.gene59887.t1 | MTR_2g006870 | 50.211 | 474 | 234 | 2 | 11 | 482 | 47 | 520 | 1.49e-169 | 506 |
| MS.gene59887.t1 | MTR_1g011755 | 52.778 | 468 | 202 | 5 | 9 | 471 | 28 | 481 | 4.17e-167 | 500 |
| MS.gene59887.t1 | MTR_3g107720 | 51.992 | 477 | 219 | 4 | 12 | 483 | 47 | 518 | 6.44e-163 | 491 |
| MS.gene59887.t1 | MTR_3g108320 | 45.053 | 566 | 286 | 8 | 9 | 564 | 23 | 573 | 1.64e-153 | 458 |
| MS.gene59887.t1 | MTR_3g108320 | 49.260 | 473 | 236 | 3 | 9 | 477 | 23 | 495 | 1.92e-153 | 456 |
| MS.gene59887.t1 | MTR_3g108320 | 46.382 | 539 | 270 | 7 | 9 | 543 | 23 | 546 | 2.03e-153 | 456 |
| MS.gene59887.t1 | MTR_5g077770 | 33.814 | 485 | 304 | 7 | 18 | 493 | 71 | 547 | 5.09e-85 | 285 |
| MS.gene59887.t1 | MTR_1g040590 | 30.070 | 286 | 183 | 3 | 161 | 443 | 11 | 282 | 1.29e-34 | 133 |
| MS.gene59887.t1 | MTR_4g113370 | 32.883 | 222 | 147 | 1 | 251 | 470 | 5 | 226 | 7.98e-33 | 127 |
| MS.gene59887.t1 | MTR_0279s0030 | 32.937 | 252 | 153 | 7 | 28 | 277 | 2 | 239 | 2.79e-24 | 105 |
| MS.gene59887.t1 | MTR_4g113390 | 32.524 | 206 | 131 | 5 | 26 | 226 | 16 | 218 | 1.07e-23 | 100 |
| MS.gene59887.t1 | MTR_4g130820 | 19.662 | 473 | 281 | 11 | 27 | 409 | 97 | 560 | 1.28e-16 | 84.3 |
| MS.gene59887.t1 | MTR_4g020720 | 51.471 | 68 | 32 | 1 | 408 | 475 | 12 | 78 | 2.24e-11 | 65.5 |
| MS.gene59887.t1 | MTR_0279s0030 | 32.558 | 129 | 82 | 3 | 149 | 277 | 51 | 174 | 2.34e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59887.t1 | AT5G46240 | 59.036 | 664 | 250 | 5 | 11 | 674 | 33 | 674 | 0.0 | 790 |
| MS.gene59887.t1 | AT4G18290 | 57.879 | 679 | 261 | 9 | 11 | 679 | 33 | 696 | 0.0 | 751 |
| MS.gene59887.t1 | AT4G18290 | 57.879 | 679 | 261 | 9 | 11 | 679 | 44 | 707 | 0.0 | 750 |
| MS.gene59887.t1 | AT2G26650 | 57.773 | 476 | 194 | 3 | 7 | 480 | 27 | 497 | 0.0 | 582 |
| MS.gene59887.t1 | AT4G32500 | 55.833 | 480 | 204 | 3 | 7 | 480 | 44 | 521 | 0.0 | 552 |
| MS.gene59887.t1 | AT2G25600 | 56.632 | 475 | 200 | 3 | 10 | 480 | 51 | 523 | 0.0 | 551 |
| MS.gene59887.t1 | AT2G26650 | 58.690 | 397 | 157 | 3 | 86 | 480 | 1 | 392 | 1.10e-161 | 484 |
| MS.gene59887.t1 | AT4G22200 | 49.163 | 478 | 238 | 4 | 11 | 484 | 47 | 523 | 2.89e-161 | 477 |
| MS.gene59887.t1 | AT4G22200 | 49.163 | 478 | 238 | 4 | 11 | 484 | 47 | 523 | 2.68e-159 | 479 |
| MS.gene59887.t1 | AT4G32650 | 47.490 | 478 | 243 | 5 | 9 | 480 | 57 | 532 | 3.55e-140 | 423 |
| MS.gene59887.t1 | AT4G32650 | 47.490 | 478 | 243 | 5 | 9 | 480 | 57 | 532 | 5.43e-140 | 425 |
| MS.gene59887.t1 | AT4G32650 | 47.490 | 478 | 243 | 5 | 9 | 480 | 57 | 532 | 7.64e-140 | 424 |
| MS.gene59887.t1 | AT3G02850 | 37.581 | 463 | 272 | 7 | 26 | 479 | 71 | 525 | 1.93e-92 | 299 |
| MS.gene59887.t1 | AT3G02850 | 37.581 | 463 | 272 | 7 | 26 | 479 | 71 | 525 | 1.96e-91 | 301 |
| MS.gene59887.t1 | AT3G02850 | 37.581 | 463 | 272 | 7 | 26 | 479 | 71 | 525 | 5.63e-91 | 301 |
| MS.gene59887.t1 | AT5G37500 | 35.463 | 454 | 279 | 6 | 27 | 471 | 55 | 503 | 1.60e-84 | 281 |
| MS.gene59887.t1 | AT5G37500 | 35.463 | 454 | 279 | 6 | 27 | 471 | 55 | 503 | 8.61e-84 | 281 |
| MS.gene59887.t1 | AT5G37500 | 35.463 | 454 | 279 | 6 | 27 | 471 | 55 | 503 | 1.50e-83 | 281 |
| MS.gene59887.t1 | AT5G37500 | 34.978 | 446 | 276 | 6 | 35 | 471 | 9 | 449 | 2.84e-80 | 271 |
| MS.gene59887.t1 | AT5G57940 | 19.874 | 478 | 277 | 12 | 27 | 409 | 86 | 552 | 1.70e-13 | 74.3 |
| MS.gene59887.t1 | AT5G57940 | 19.874 | 478 | 277 | 12 | 27 | 409 | 86 | 552 | 1.70e-13 | 74.3 |
| MS.gene59887.t1 | AT5G57940 | 19.874 | 478 | 277 | 12 | 27 | 409 | 79 | 545 | 1.91e-13 | 74.3 |
Find 105 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTGACATGCTTCGTTTA+TGG | 0.146203 | 8.3:+53305471 | MS.gene59887:CDS |
| TGAACATATAATAGACTTTA+TGG | 0.172466 | 8.3:+53309965 | MS.gene59887:CDS |
| TACTTGCTCCTAAAGAAATT+TGG | 0.186425 | 8.3:-53310019 | None:intergenic |
| GAGAAAACATACAAAATTTC+TGG | 0.193463 | 8.3:-53306285 | None:intergenic |
| AAAAGATTTGACATTATAAT+TGG | 0.201416 | 8.3:-53309168 | None:intergenic |
| GGTCAAGAAGATTTAGGTTT+TGG | 0.233837 | 8.3:+53309696 | MS.gene59887:CDS |
| GAAAATCTTGTGAAACTCTT+TGG | 0.257211 | 8.3:-53308394 | None:intergenic |
| TAAAATTTGTGAAAGCTCTT+TGG | 0.273667 | 8.3:-53309091 | None:intergenic |
| ACATTCGCTGGAATTACTTT+TGG | 0.276372 | 8.3:+53305788 | MS.gene59887:CDS |
| ATTATAATTGGTGCTGCTTC+TGG | 0.277918 | 8.3:-53309156 | None:intergenic |
| TTAAGTGGTCAAGAAGATTT+AGG | 0.282480 | 8.3:+53309690 | MS.gene59887:CDS |
| ACCGATCATAGCAGCGAGTT+TGG | 0.288257 | 8.3:+53305440 | MS.gene59887:CDS |
| AGGAGTGACCAAATTTCTTT+AGG | 0.296498 | 8.3:+53310011 | MS.gene59887:CDS |
| GAAGATACATTTGGAGAGAT+TGG | 0.307981 | 8.3:+53309030 | MS.gene59887:CDS |
| ATGCTTGCGCGAATTGCTTT+TGG | 0.309205 | 8.3:-53308326 | None:intergenic |
| TTGTCTCTTCATGACATAAA+TGG | 0.315163 | 8.3:+53309735 | MS.gene59887:CDS |
| TGTAGCATAACATCTACTTT+AGG | 0.324139 | 8.3:-53308559 | None:intergenic |
| TCTTTCTGTTTCCATCTAAC+AGG | 0.326795 | 8.3:-53309891 | None:intergenic |
| GGATTAACAGCTTATATCAT+TGG | 0.329952 | 8.3:+53306224 | MS.gene59887:CDS |
| AGACTCATTTCCTTAAAATC+AGG | 0.330725 | 8.3:-53306074 | None:intergenic |
| TCTGAATTTAGTATTATTGT+AGG | 0.333982 | 8.3:-53310523 | None:intergenic |
| GCTGCTATGATCGGTGAATA+TGG | 0.336774 | 8.3:-53305432 | None:intergenic |
| CAAAACAAGAGTGATGAAAA+TGG | 0.341999 | 8.3:+53309930 | MS.gene59887:CDS |
| AAACAGCAAGAAACAATAAA+TGG | 0.355281 | 8.3:+53308299 | MS.gene59887:CDS |
| TTTAGTATTATTGTAGGCCT+TGG | 0.358325 | 8.3:-53310517 | None:intergenic |
| ACACTAACTACTACTGGATA+TGG | 0.362568 | 8.3:+53306137 | MS.gene59887:CDS |
| ATCATAAGAAAATTGCAAAA+AGG | 0.364458 | 8.3:+53305217 | MS.gene59887:CDS |
| TGCTTCTGGATTTGCTTGTA+AGG | 0.365673 | 8.3:-53309142 | None:intergenic |
| ATAGGTACCATGATTCAAAA+AGG | 0.392543 | 8.3:+53306030 | MS.gene59887:CDS |
| TGACAAATCTTGTTGTTCAA+TGG | 0.396179 | 8.3:+53306252 | MS.gene59887:CDS |
| TGGATACATGTTGTTCAACT+TGG | 0.398387 | 8.3:+53306202 | MS.gene59887:CDS |
| AGAAGCTAAGTCCTGTTAGA+TGG | 0.400842 | 8.3:+53309880 | MS.gene59887:CDS |
| GAAACTGCAGGAGAAAAGTT+TGG | 0.409163 | 8.3:+53310490 | MS.gene59887:intron |
| AGGTAGGATTTCTGCACAAC+AGG | 0.414712 | 8.3:-53308368 | None:intergenic |
| ATCGGTGAATATGGAGCTAA+TGG | 0.417380 | 8.3:-53305423 | None:intergenic |
| ATCATAGATAACATTGTGAA+TGG | 0.421566 | 8.3:+53305120 | MS.gene59887:CDS |
| TTAACTATTTACTTGCAGAT+AGG | 0.425817 | 8.3:+53306012 | MS.gene59887:CDS |
| GATCTCATTCGCAGTGTTGA+TGG | 0.426673 | 8.3:+53308715 | MS.gene59887:CDS |
| ACTGGTATGTTGCCATCTCT+TGG | 0.429334 | 8.3:+53304802 | MS.gene59887:CDS |
| AGCAGCTCATCCAATGAATC+AGG | 0.431556 | 8.3:-53310155 | None:intergenic |
| ATTTATTTATTGCAGGGCTT+GGG | 0.439583 | 8.3:+53305008 | MS.gene59887:intron |
| TTCTTAGTTTAGTTTCTTGG+TGG | 0.442673 | 8.3:-53304834 | None:intergenic |
| TGGGCTGATGAATTCCAAAC+TGG | 0.444178 | 8.3:+53304784 | MS.gene59887:CDS |
| GGCAGAAAAGCAAATTGAAA+GGG | 0.444608 | 8.3:-53305075 | None:intergenic |
| AATAGTGTCTCATGTTTCTC+AGG | 0.446499 | 8.3:-53305096 | None:intergenic |
| CAGATAACCTTAGCCATGTT+AGG | 0.447586 | 8.3:+53309991 | MS.gene59887:CDS |
| AGCAACAACCATTCACTGTT+AGG | 0.451928 | 8.3:+53309067 | MS.gene59887:CDS |
| GCAAGTGCAGAAGATACATT+TGG | 0.454936 | 8.3:+53309021 | MS.gene59887:CDS |
| TTCTAGTGCTTTACTCTGCA+TGG | 0.457513 | 8.3:+53305046 | MS.gene59887:CDS |
| ATTGTGACACTAACTACTAC+TGG | 0.461006 | 8.3:+53306131 | MS.gene59887:CDS |
| GAGATGGCAACATACCAGTT+TGG | 0.464708 | 8.3:-53304798 | None:intergenic |
| GATTAACAGCTTATATCATT+GGG | 0.465580 | 8.3:+53306225 | MS.gene59887:CDS |
| CAGGAGATGTTGTTTGACAT+TGG | 0.469193 | 8.3:+53306182 | MS.gene59887:CDS |
| GATCTATACATGTTGGTCTC+AGG | 0.472398 | 8.3:+53308598 | MS.gene59887:CDS |
| TCTTTGGTCCTAACAGTGAA+TGG | 0.484058 | 8.3:-53309075 | None:intergenic |
| ACCAACATGTATAGATCTGT+TGG | 0.488657 | 8.3:-53308592 | None:intergenic |
| GATGAGCTGCTCAAGATTGT+TGG | 0.491676 | 8.3:+53310167 | MS.gene59887:CDS |
| TCTTATGATCATCAATAAGA+AGG | 0.495380 | 8.3:-53305203 | None:intergenic |
| GATATGTGATAGCAATGTAT+TGG | 0.506357 | 8.3:+53306105 | MS.gene59887:CDS |
| TACCAGTAATTTCGATCGAA+GGG | 0.507573 | 8.3:-53304871 | None:intergenic |
| CTTGTGAAACTCTTTGGAAG+AGG | 0.512428 | 8.3:-53308388 | None:intergenic |
| GGATACATGTTGTTCAACTT+GGG | 0.513252 | 8.3:+53306203 | MS.gene59887:CDS |
| TCCAAACTCGCTGCTATGAT+CGG | 0.522570 | 8.3:-53305441 | None:intergenic |
| GTCTTGTCCTACATAGTGAA+TGG | 0.526427 | 8.3:-53310090 | None:intergenic |
| TGTCTCAAGTTCAAAACAGA+AGG | 0.534513 | 8.3:+53308272 | MS.gene59887:CDS |
| CAAAGATAAACCAGGTACAT+AGG | 0.535059 | 8.3:-53305373 | None:intergenic |
| GACTCATTTCCTTAAAATCA+GGG | 0.537535 | 8.3:-53306073 | None:intergenic |
| CATCAATAAGAAGGTAGGAA+TGG | 0.538204 | 8.3:-53305194 | None:intergenic |
| ATTTCAGGTACCTATGTACC+TGG | 0.540333 | 8.3:+53305363 | MS.gene59887:intron |
| ACCAAGTTACAAGGAAAACA+TGG | 0.541288 | 8.3:+53310116 | MS.gene59887:CDS |
| TCATGAAGAGACAATCTAGT+AGG | 0.542205 | 8.3:-53309726 | None:intergenic |
| GGTCACTCCTAACATGGCTA+AGG | 0.542535 | 8.3:-53309998 | None:intergenic |
| TGAAACTCTTTGGAAGAGGT+AGG | 0.544474 | 8.3:-53308384 | None:intergenic |
| CAAGACAGAACCAAGTTACA+AGG | 0.545091 | 8.3:+53310107 | MS.gene59887:CDS |
| AGAGTTACCATTCACTATGT+AGG | 0.549174 | 8.3:+53310083 | MS.gene59887:CDS |
| AGCATAACATCTACTTTAGG+TGG | 0.555493 | 8.3:-53308556 | None:intergenic |
| ATGATCATCAATAAGAAGGT+AGG | 0.555706 | 8.3:-53305199 | None:intergenic |
| TTACCAGTAATTTCGATCGA+AGG | 0.556205 | 8.3:-53304872 | None:intergenic |
| AGGCAGAAAAGCAAATTGAA+AGG | 0.556863 | 8.3:-53305076 | None:intergenic |
| TGGACTCTTGCTCCAAGAGA+TGG | 0.566319 | 8.3:-53304814 | None:intergenic |
| ATTGCAGGGCTTGGGACAAG+TGG | 0.577132 | 8.3:+53305016 | MS.gene59887:intron |
| CAAGTAACCATCTAATCGAA+AGG | 0.581659 | 8.3:+53310036 | MS.gene59887:CDS |
| GACCTTTGTGTCATTCGAGA+CGG | 0.589584 | 8.3:+53310562 | MS.gene59887:CDS |
| GAGTCAGTTCTCTCTTTGCA+AGG | 0.598149 | 8.3:+53305504 | MS.gene59887:CDS |
| GAGAAAAGTTTGGAGGGCCA+AGG | 0.600290 | 8.3:+53310500 | MS.gene59887:CDS |
| AAATTTGGTCACTCCTAACA+TGG | 0.608000 | 8.3:-53310004 | None:intergenic |
| CTGCAGGAGAAAAGTTTGGA+GGG | 0.609739 | 8.3:+53310494 | MS.gene59887:intron |
| CATGTTGGTCTCAGGATCAG+TGG | 0.614447 | 8.3:+53308606 | MS.gene59887:CDS |
| TCATCTACCACATGAAACAC+AGG | 0.621049 | 8.3:+53308229 | MS.gene59887:CDS |
| TCCAACAGATCTATACATGT+TGG | 0.630698 | 8.3:+53308591 | MS.gene59887:CDS |
| ACTGCAGGAGAAAAGTTTGG+AGG | 0.631832 | 8.3:+53310493 | MS.gene59887:intron |
| CCAGTAATTTCGATCGAAGG+GGG | 0.632814 | 8.3:-53304869 | None:intergenic |
| ATTTGATCCTGTGTTTCATG+TGG | 0.632983 | 8.3:-53308236 | None:intergenic |
| TTTGCATGCTAATAACACTC+AGG | 0.636938 | 8.3:+53306163 | MS.gene59887:CDS |
| GCAGAAAAGCAAATTGAAAG+GGG | 0.638425 | 8.3:-53305074 | None:intergenic |
| ATGGAGCTAATGGTTTGAAG+AGG | 0.639706 | 8.3:-53305413 | None:intergenic |
| ACCAGTAATTTCGATCGAAG+GGG | 0.639711 | 8.3:-53304870 | None:intergenic |
| TTGTTTGCAGTACACTGTGC+AGG | 0.646336 | 8.3:+53305984 | MS.gene59887:CDS |
| CACCGTCTCGAATGACACAA+AGG | 0.661055 | 8.3:-53310564 | None:intergenic |
| TGAAGAGACAATCTAGTAGG+CGG | 0.665935 | 8.3:-53309723 | None:intergenic |
| CCAAGTTACAAGGAAAACAT+GGG | 0.667847 | 8.3:+53310117 | MS.gene59887:CDS |
| TAAATGGTGTAAACAACACA+AGG | 0.680366 | 8.3:+53309751 | MS.gene59887:CDS |
| CAGAAAAGCAAATTGAAAGG+GGG | 0.682557 | 8.3:-53305073 | None:intergenic |
| TCGATGCTTAAAGCTCATTG+CGG | 0.713010 | 8.3:+53305813 | MS.gene59887:CDS |
| ACAAACATCAAAGATAAACC+AGG | 0.718745 | 8.3:-53305381 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTTATATTTATATTTA+TGG | + | chr8.3:53306635-53306654 | MS.gene59887:intron | 0.0% |
| !! | ATATTTATATTTATATTTAT+GGG | + | chr8.3:53306636-53306655 | MS.gene59887:intron | 0.0% |
| !!! | TTTTTATTTTATTTTATTTT+TGG | - | chr8.3:53307547-53307566 | None:intergenic | 0.0% |
| !! | TATATAATTTATTTATTGCA+GGG | + | chr8.3:53305002-53305021 | MS.gene59887:intron | 10.0% |
| !! | TTATATAATTTATTTATTGC+AGG | + | chr8.3:53305001-53305020 | MS.gene59887:intron | 10.0% |
| !!! | TTATTCAAATTTTAAAAACT+AGG | + | chr8.3:53309584-53309603 | MS.gene59887:intron | 10.0% |
| !!! | TTCTATTTTTGTTTTTAAAT+AGG | + | chr8.3:53305855-53305874 | MS.gene59887:intron | 10.0% |
| !! | AAAAGATTTGACATTATAAT+TGG | - | chr8.3:53309171-53309190 | None:intergenic | 15.0% |
| !! | AAAATATAACTTTACATAGT+TGG | + | chr8.3:53306545-53306564 | MS.gene59887:intron | 15.0% |
| !! | AATTTACAAAAAATTCACAT+GGG | + | chr8.3:53309790-53309809 | MS.gene59887:CDS | 15.0% |
| !! | TAGTCTTTAAATTCATAAAA+AGG | - | chr8.3:53308783-53308802 | None:intergenic | 15.0% |
| !! | TTATAAATATACCATATTTG+AGG | - | chr8.3:53307199-53307218 | None:intergenic | 15.0% |
| !! | TTCATTTCTTTCATTATTAT+TGG | + | chr8.3:53308444-53308463 | MS.gene59887:intron | 15.0% |
| !!! | AAAAACTGAAGATTATATTT+TGG | - | chr8.3:53309337-53309356 | None:intergenic | 15.0% |
| !!! | GTACTTTATGTTTTTTTTTT+TGG | + | chr8.3:53307001-53307020 | MS.gene59887:intron | 15.0% |
| !!! | TATAATGTCAAATCTTTTTA+TGG | + | chr8.3:53309173-53309192 | MS.gene59887:CDS | 15.0% |
| !!! | TGAATAAATATTGATTTTTG+TGG | + | chr8.3:53308160-53308179 | MS.gene59887:intron | 15.0% |
| !!! | TTAAATTTTACATGATTAGT+TGG | - | chr8.3:53310415-53310434 | None:intergenic | 15.0% |
| !!! | TTCATTTTATTAATTCTACA+AGG | - | chr8.3:53305280-53305299 | None:intergenic | 15.0% |
| !!! | TTGAGAAATTTGATTTTTTA+AGG | - | chr8.3:53309472-53309491 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTTTTTTGAAGG+AGG | - | chr8.3:53307487-53307506 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAACCTCAAATA+TGG | + | chr8.3:53307185-53307204 | MS.gene59887:intron | 15.0% |
| !! | AAACCTGAATTATTTATGTT+AGG | - | chr8.3:53308993-53309012 | None:intergenic | 20.0% |
| !! | AAAGAAATAACATAGTAAAG+TGG | - | chr8.3:53305254-53305273 | None:intergenic | 20.0% |
| !! | AACCTGAATTATTTATGTTA+GGG | - | chr8.3:53308992-53309011 | None:intergenic | 20.0% |
| !! | ATATGTCTAAATATGTTAGA+GGG | - | chr8.3:53306462-53306481 | None:intergenic | 20.0% |
| !! | ATCATAAGAAAATTGCAAAA+AGG | + | chr8.3:53305217-53305236 | MS.gene59887:CDS | 20.0% |
| !! | ATTTACAAAAAATTCACATG+GGG | + | chr8.3:53309791-53309810 | MS.gene59887:CDS | 20.0% |
| !! | GAAACATTTCAATTTCTAAT+TGG | - | chr8.3:53305936-53305955 | None:intergenic | 20.0% |
| !! | GAATTTACAAAAAATTCACA+TGG | + | chr8.3:53309789-53309808 | MS.gene59887:CDS | 20.0% |
| !! | TATATGTCTAAATATGTTAG+AGG | - | chr8.3:53306463-53306482 | None:intergenic | 20.0% |
| !! | TCTGAATTTAGTATTATTGT+AGG | - | chr8.3:53310526-53310545 | None:intergenic | 20.0% |
| !! | TGAACATATAATAGACTTTA+TGG | + | chr8.3:53309965-53309984 | MS.gene59887:CDS | 20.0% |
| !!! | AAGTTAAATAATGAGTTGAT+CGG | - | chr8.3:53309524-53309543 | None:intergenic | 20.0% |
| !!! | AATTACTCTAAAAGTTTCAA+TGG | - | chr8.3:53307883-53307902 | None:intergenic | 20.0% |
| !!! | ATTACTCTAAAAGTTTCAAT+GGG | - | chr8.3:53307882-53307901 | None:intergenic | 20.0% |
| !!! | ATTTTCTTAGTTTAGTTTCT+TGG | - | chr8.3:53304840-53304859 | None:intergenic | 20.0% |
| !!! | CAGTTTTAAATAAAGTTATG+CGG | - | chr8.3:53305707-53305726 | None:intergenic | 20.0% |
| !!! | GACAAGAATTATTTTTTTCT+TGG | + | chr8.3:53305324-53305343 | MS.gene59887:intron | 20.0% |
| !!! | TCTGATTTTATAATCTCTTA+GGG | + | chr8.3:53309618-53309637 | MS.gene59887:intron | 20.0% |
| !!! | TTCTGATTTTATAATCTCTT+AGG | + | chr8.3:53309617-53309636 | MS.gene59887:intron | 20.0% |
| ! | AAACAGCAAGAAACAATAAA+TGG | + | chr8.3:53308299-53308318 | MS.gene59887:CDS | 25.0% |
| ! | AAACCAAACCATTATAGATT+TGG | - | chr8.3:53307766-53307785 | None:intergenic | 25.0% |
| ! | AATATAAGCTACGAATTTAG+TGG | - | chr8.3:53309382-53309401 | None:intergenic | 25.0% |
| ! | AATATACTAGAAATTCGATG+AGG | + | chr8.3:53309558-53309577 | MS.gene59887:intron | 25.0% |
| ! | AATATTTACTCTGTCTATTG+CGG | - | chr8.3:53306621-53306640 | None:intergenic | 25.0% |
| ! | ACTCTCTTATCAACAAAAAT+CGG | - | chr8.3:53310068-53310087 | None:intergenic | 25.0% |
| ! | AGATGTTGAATCATATTTCA+CGG | - | chr8.3:53306521-53306540 | None:intergenic | 25.0% |
| ! | AGCAAGTGATGTAAATTAAT+TGG | + | chr8.3:53306899-53306918 | MS.gene59887:intron | 25.0% |
| ! | ATCATAGATAACATTGTGAA+TGG | + | chr8.3:53305120-53305139 | MS.gene59887:CDS | 25.0% |
| ! | ATTATTCAACATTACACATC+AGG | - | chr8.3:53309406-53309425 | None:intergenic | 25.0% |
| ! | ATTGCAGATATTAATACTCT+AGG | + | chr8.3:53306699-53306718 | MS.gene59887:intron | 25.0% |
| ! | ATTTAAAGACTATGCATCAA+TGG | + | chr8.3:53308791-53308810 | MS.gene59887:intron | 25.0% |
| ! | CCTTATTGTTATCTATTACA+AGG | + | chr8.3:53308478-53308497 | MS.gene59887:intron | 25.0% |
| ! | CCTTGTAATAGATAACAATA+AGG | - | chr8.3:53308481-53308500 | None:intergenic | 25.0% |
| ! | GAGAAAACATACAAAATTTC+TGG | - | chr8.3:53306288-53306307 | None:intergenic | 25.0% |
| ! | GATTAACAGCTTATATCATT+GGG | + | chr8.3:53306225-53306244 | MS.gene59887:CDS | 25.0% |
| ! | GTCGTTATGAACTTATAATA+TGG | - | chr8.3:53307681-53307700 | None:intergenic | 25.0% |
| ! | TAAAATTTGTGAAAGCTCTT+TGG | - | chr8.3:53309094-53309113 | None:intergenic | 25.0% |
| ! | TAATTACACACAAACTTGAA+TGG | + | chr8.3:53306671-53306690 | MS.gene59887:intron | 25.0% |
| ! | TACCCTAACATAAATAATTC+AGG | + | chr8.3:53308987-53309006 | MS.gene59887:intron | 25.0% |
| ! | TATTATAAGTTCATAACGAC+TGG | + | chr8.3:53307681-53307700 | MS.gene59887:intron | 25.0% |
| ! | TATTTGACAGAATGTTTAAG+TGG | - | chr8.3:53310200-53310219 | None:intergenic | 25.0% |
| ! | TCGTAAGTTTGTGAAAAATA+AGG | - | chr8.3:53309292-53309311 | None:intergenic | 25.0% |
| ! | TCTTAATATTGCAAAAATCG+CGG | + | chr8.3:53305602-53305621 | MS.gene59887:intron | 25.0% |
| ! | TCTTATGATCATCAATAAGA+AGG | - | chr8.3:53305206-53305225 | None:intergenic | 25.0% |
| ! | TGTAATGTTGAATAATGAGT+TGG | + | chr8.3:53309410-53309429 | MS.gene59887:intron | 25.0% |
| ! | TTAACTATTTACTTGCAGAT+AGG | + | chr8.3:53306012-53306031 | MS.gene59887:CDS | 25.0% |
| ! | TTGAATTGCTTAAGAAAATG+TGG | + | chr8.3:53308116-53308135 | MS.gene59887:intron | 25.0% |
| ! | TTTAAATAGGTTCCATCTAA+CGG | + | chr8.3:53305868-53305887 | MS.gene59887:intron | 25.0% |
| ! | TTTACAAAAAATTCACATGG+GGG | + | chr8.3:53309792-53309811 | MS.gene59887:CDS | 25.0% |
| ! | TTTATATATATGTTGGTCGT+GGG | - | chr8.3:53306736-53306755 | None:intergenic | 25.0% |
| !! | AAGAGCTTTCACAAATTTTA+AGG | + | chr8.3:53309094-53309113 | MS.gene59887:CDS | 25.0% |
| !! | ACAAGATTTTCTATTTCAAC+TGG | + | chr8.3:53308406-53308425 | MS.gene59887:CDS | 25.0% |
| !! | CACTATAAAAAGCATAAGTA+AGG | - | chr8.3:53306313-53306332 | None:intergenic | 25.0% |
| !! | CATTTTCCTTAGAATAAATC+CGG | + | chr8.3:53307056-53307075 | MS.gene59887:intron | 25.0% |
| !! | GACTTTTGATCAAATTTTTC+AGG | + | chr8.3:53305956-53305975 | MS.gene59887:intron | 25.0% |
| !! | GATAATTTTACCTGATTCAT+TGG | + | chr8.3:53310145-53310164 | MS.gene59887:CDS | 25.0% |
| !! | TACTCTTTTGTAAATAATGC+CGG | + | chr8.3:53310218-53310237 | MS.gene59887:intron | 25.0% |
| !! | TGGTAATTTTTATTCCTACT+TGG | + | chr8.3:53307021-53307040 | MS.gene59887:intron | 25.0% |
| !! | TTGTGATTTAAAACAATGCT+TGG | - | chr8.3:53305570-53305589 | None:intergenic | 25.0% |
| !! | TTTTATATATATGTTGGTCG+TGG | - | chr8.3:53306737-53306756 | None:intergenic | 25.0% |
| !! | TTTTCATTTGCTTCTTTTTC+TGG | - | chr8.3:53309861-53309880 | None:intergenic | 25.0% |
| !! | TTTTCTTAAGCAATTCAAGT+TGG | - | chr8.3:53308114-53308133 | None:intergenic | 25.0% |
| !!! | AATAATTCAGGTTTTGATGA+AGG | + | chr8.3:53308999-53309018 | MS.gene59887:intron | 25.0% |
| !!! | AATCCTATTCATTTTTGAGA+GGG | + | chr8.3:53306926-53306945 | MS.gene59887:intron | 25.0% |
| !!! | ATTTTAAGGAAATGAGTCTT+TGG | + | chr8.3:53306078-53306097 | MS.gene59887:CDS | 25.0% |
| !!! | CCAAATTTATTTTCCCAATT+GGG | + | chr8.3:53307647-53307666 | MS.gene59887:intron | 25.0% |
| !!! | TCCAAATTTATTTTCCCAAT+TGG | + | chr8.3:53307646-53307665 | MS.gene59887:intron | 25.0% |
| !!! | TTCAAGTTGGATTGTAATAT+TGG | - | chr8.3:53308101-53308120 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTTATTTTGACAG+AGG | + | chr8.3:53309667-53309686 | MS.gene59887:intron | 25.0% |
| !!! | TTTTAAGGAAATGAGTCTTT+GGG | + | chr8.3:53306079-53306098 | MS.gene59887:CDS | 25.0% |
| AAAATCAGTCCTGCAATTAA+AGG | + | chr8.3:53307518-53307537 | MS.gene59887:intron | 30.0% | |
| AATTTATTTATTGCAGGGCT+TGG | + | chr8.3:53305007-53305026 | MS.gene59887:intron | 30.0% | |
| ACAAACATCAAAGATAAACC+AGG | - | chr8.3:53305384-53305403 | None:intergenic | 30.0% | |
| ACGTTTCAACAAAATCACAA+TGG | + | chr8.3:53310333-53310352 | MS.gene59887:intron | 30.0% | |
| ACTTTACATAGTTGGAACTA+AGG | + | chr8.3:53306553-53306572 | MS.gene59887:intron | 30.0% | |
| AGACTCATTTCCTTAAAATC+AGG | - | chr8.3:53306077-53306096 | None:intergenic | 30.0% | |
| AGATGTATTACGATTTCACA+TGG | - | chr8.3:53307920-53307939 | None:intergenic | 30.0% | |
| ATAGGTACCATGATTCAAAA+AGG | + | chr8.3:53306030-53306049 | MS.gene59887:CDS | 30.0% | |
| ATATTTACTCTGTCTATTGC+GGG | - | chr8.3:53306620-53306639 | None:intergenic | 30.0% | |
| ATGATCATCAATAAGAAGGT+AGG | - | chr8.3:53305202-53305221 | None:intergenic | 30.0% | |
| ATTTATTTATTGCAGGGCTT+GGG | + | chr8.3:53305008-53305027 | MS.gene59887:intron | 30.0% | |
| CAAAACAAGAGTGATGAAAA+TGG | + | chr8.3:53309930-53309949 | MS.gene59887:CDS | 30.0% | |
| CCCAATTGGGAAAATAAATT+TGG | - | chr8.3:53307650-53307669 | None:intergenic | 30.0% | |
| GAAAATCTTGTGAAACTCTT+TGG | - | chr8.3:53308397-53308416 | None:intergenic | 30.0% | |
| GACTCATTTCCTTAAAATCA+GGG | - | chr8.3:53306076-53306095 | None:intergenic | 30.0% | |
| GATATGTGATAGCAATGTAT+TGG | + | chr8.3:53306105-53306124 | MS.gene59887:CDS | 30.0% | |
| GGATTAACAGCTTATATCAT+TGG | + | chr8.3:53306224-53306243 | MS.gene59887:CDS | 30.0% | |
| GGTGGTTTAAATCATTTAGT+GGG | + | chr8.3:53307589-53307608 | MS.gene59887:intron | 30.0% | |
| GTAAGTAACTTTGTAACCAT+AGG | + | chr8.3:53308507-53308526 | MS.gene59887:intron | 30.0% | |
| TAAATGGTGTAAACAACACA+AGG | + | chr8.3:53309751-53309770 | MS.gene59887:CDS | 30.0% | |
| TACTTGCTCCTAAAGAAATT+TGG | - | chr8.3:53310022-53310041 | None:intergenic | 30.0% | |
| TATAATCTCTTAGGGAGAAA+GGG | + | chr8.3:53309626-53309645 | MS.gene59887:intron | 30.0% | |
| TATATTTATGGGTCTGAGTT+CGG | + | chr8.3:53306647-53306666 | MS.gene59887:intron | 30.0% | |
| TCCATAAAAACTTCGATTTC+AGG | + | chr8.3:53305348-53305367 | MS.gene59887:intron | 30.0% | |
| TCTTGCCTTAATACTTAATG+TGG | + | chr8.3:53306404-53306423 | MS.gene59887:intron | 30.0% | |
| TGATATTTAAGCAACTCACT+CGG | + | chr8.3:53307946-53307965 | MS.gene59887:intron | 30.0% | |
| TGATCAATTTAATCTGTTGC+AGG | + | chr8.3:53308693-53308712 | MS.gene59887:intron | 30.0% | |
| TGGTGGTTTAAATCATTTAG+TGG | + | chr8.3:53307588-53307607 | MS.gene59887:intron | 30.0% | |
| TGTAGCATAACATCTACTTT+AGG | - | chr8.3:53308562-53308581 | None:intergenic | 30.0% | |
| TTAAGTGGTCAAGAAGATTT+AGG | + | chr8.3:53309690-53309709 | MS.gene59887:CDS | 30.0% | |
| TTACAAGTGTTCAACATACT+TGG | - | chr8.3:53306592-53306611 | None:intergenic | 30.0% | |
| TTAGAATAAATCCGGACTTT+GGG | + | chr8.3:53307064-53307083 | MS.gene59887:intron | 30.0% | |
| TTATAATCTCTTAGGGAGAA+AGG | + | chr8.3:53309625-53309644 | MS.gene59887:intron | 30.0% | |
| TTATATATATGTTGGTCGTG+GGG | - | chr8.3:53306735-53306754 | None:intergenic | 30.0% | |
| TTGTCTCTTCATGACATAAA+TGG | + | chr8.3:53309735-53309754 | MS.gene59887:CDS | 30.0% | |
| TTTAGTATTATTGTAGGCCT+TGG | - | chr8.3:53310520-53310539 | None:intergenic | 30.0% | |
| ! | ACCTGAAATCGAAGTTTTTA+TGG | - | chr8.3:53305352-53305371 | None:intergenic | 30.0% |
| ! | CAAACCATTATAGATTTGGT+CGG | - | chr8.3:53307762-53307781 | None:intergenic | 30.0% |
| ! | CAATAATACTTTTGTGAGAG+AGG | - | chr8.3:53309248-53309267 | None:intergenic | 30.0% |
| ! | GATCATCTGTATTTTCTTTG+CGG | + | chr8.3:53310586-53310605 | MS.gene59887:CDS | 30.0% |
| ! | GGTCGGTATGAATATTATTT+TGG | - | chr8.3:53307745-53307764 | None:intergenic | 30.0% |
| ! | TGGTTACAGTCATAAAGTTT+TGG | - | chr8.3:53307447-53307466 | None:intergenic | 30.0% |
| ! | TTCTTAGTTTAGTTTCTTGG+TGG | - | chr8.3:53304837-53304856 | None:intergenic | 30.0% |
| ! | TTTAGAGTAATTGTGACAGA+AGG | + | chr8.3:53307891-53307910 | MS.gene59887:intron | 30.0% |
| !! | ATGTTGAATAATGAGTTGGT+CGG | + | chr8.3:53309414-53309433 | MS.gene59887:intron | 30.0% |
| !! | CAACTAACATCGATTTAGTT+TGG | - | chr8.3:53307816-53307835 | None:intergenic | 30.0% |
| !! | GAATCCTATTCATTTTTGAG+AGG | + | chr8.3:53306925-53306944 | MS.gene59887:intron | 30.0% |
| !! | TCGTGGTTAACTTGTATTTA+TGG | - | chr8.3:53307312-53307331 | None:intergenic | 30.0% |
| !! | TGACAAATCTTGTTGTTCAA+TGG | + | chr8.3:53306252-53306271 | MS.gene59887:CDS | 30.0% |
| !! | TTTAATTGCAGGACTGATTT+TGG | - | chr8.3:53307519-53307538 | None:intergenic | 30.0% |
| !!! | GTTTTTTCCTTTCGATTAGA+TGG | - | chr8.3:53310046-53310065 | None:intergenic | 30.0% |
| !!! | TTATTTTGACAGAGGTTAAG+TGG | + | chr8.3:53309675-53309694 | MS.gene59887:intron | 30.0% |
| !!! | TTTTGGTTTCCTTTAATTGC+AGG | - | chr8.3:53307530-53307549 | None:intergenic | 30.0% |
| AAAGTTATGCGGCTGTAATT+TGG | - | chr8.3:53305696-53305715 | None:intergenic | 35.0% | |
| AAATTTGGACCAATGTCAGT+GGG | - | chr8.3:53307635-53307654 | None:intergenic | 35.0% | |
| AAATTTGGTCACTCCTAACA+TGG | - | chr8.3:53310007-53310026 | None:intergenic | 35.0% | |
| AACTCTAGACTAGTACTACA+TGG | + | chr8.3:53307992-53308011 | MS.gene59887:intron | 35.0% | |
| AAGTTATGCGGCTGTAATTT+GGG | - | chr8.3:53305695-53305714 | None:intergenic | 35.0% | |
| AATAGTGTCTCATGTTTCTC+AGG | - | chr8.3:53305099-53305118 | None:intergenic | 35.0% | |
| ACACTAACTACTACTGGATA+TGG | + | chr8.3:53306137-53306156 | MS.gene59887:CDS | 35.0% | |
| ACCAACATGTATAGATCTGT+TGG | - | chr8.3:53308595-53308614 | None:intergenic | 35.0% | |
| ACCAAGTTACAAGGAAAACA+TGG | + | chr8.3:53310116-53310135 | MS.gene59887:CDS | 35.0% | |
| ACCATGATTCAAAAAGGACA+TGG | + | chr8.3:53306036-53306055 | MS.gene59887:CDS | 35.0% | |
| ACGGACCACATTAAGTATTA+AGG | - | chr8.3:53306412-53306431 | None:intergenic | 35.0% | |
| AGAGTTACCATTCACTATGT+AGG | + | chr8.3:53310083-53310102 | MS.gene59887:CDS | 35.0% | |
| AGCATAACATCTACTTTAGG+TGG | - | chr8.3:53308559-53308578 | None:intergenic | 35.0% | |
| AGGAGTGACCAAATTTCTTT+AGG | + | chr8.3:53310011-53310030 | MS.gene59887:CDS | 35.0% | |
| AGGCAGAAAAGCAAATTGAA+AGG | - | chr8.3:53305079-53305098 | None:intergenic | 35.0% | |
| ATAGAATTACCTCCGTTAGA+TGG | - | chr8.3:53305883-53305902 | None:intergenic | 35.0% | |
| ATATTTATGGGTCTGAGTTC+GGG | + | chr8.3:53306648-53306667 | MS.gene59887:intron | 35.0% | |
| ATTGAATTCTTGAACCGATG+CGG | - | chr8.3:53308056-53308075 | None:intergenic | 35.0% | |
| ATTGTGACACTAACTACTAC+TGG | + | chr8.3:53306131-53306150 | MS.gene59887:CDS | 35.0% | |
| ATTTGATCCTGTGTTTCATG+TGG | - | chr8.3:53308239-53308258 | None:intergenic | 35.0% | |
| CAAAGATAAACCAGGTACAT+AGG | - | chr8.3:53305376-53305395 | None:intergenic | 35.0% | |
| CAAAGTCCGGATTTATTCTA+AGG | - | chr8.3:53307065-53307084 | None:intergenic | 35.0% | |
| CAAGTAACCATCTAATCGAA+AGG | + | chr8.3:53310036-53310055 | MS.gene59887:CDS | 35.0% | |
| CAGAAAAGCAAATTGAAAGG+GGG | - | chr8.3:53305076-53305095 | None:intergenic | 35.0% | |
| CATACCGACCAAATCTATAA+TGG | + | chr8.3:53307755-53307774 | MS.gene59887:intron | 35.0% | |
| CATCAATAAGAAGGTAGGAA+TGG | - | chr8.3:53305197-53305216 | None:intergenic | 35.0% | |
| CCAAGTTACAAGGAAAACAT+GGG | + | chr8.3:53310117-53310136 | MS.gene59887:CDS | 35.0% | |
| CGACCAAATCTATAATGGTT+TGG | + | chr8.3:53307760-53307779 | MS.gene59887:intron | 35.0% | |
| CTATCAATTTGTGAAACTGC+AGG | + | chr8.3:53310478-53310497 | MS.gene59887:intron | 35.0% | |
| CTTAGAATAAATCCGGACTT+TGG | + | chr8.3:53307063-53307082 | MS.gene59887:intron | 35.0% | |
| CTTCCCTCTCAAAAATGAAT+AGG | - | chr8.3:53306932-53306951 | None:intergenic | 35.0% | |
| GAAGATACATTTGGAGAGAT+TGG | + | chr8.3:53309030-53309049 | MS.gene59887:CDS | 35.0% | |
| GATTCAAAAAGGACATGGAT+TGG | + | chr8.3:53306041-53306060 | MS.gene59887:CDS | 35.0% | |
| GCACAACAGGATAAAAAAGA+TGG | - | chr8.3:53308358-53308377 | None:intergenic | 35.0% | |
| GCAGAAAAGCAAATTGAAAG+GGG | - | chr8.3:53305077-53305096 | None:intergenic | 35.0% | |
| GGATACATGTTGTTCAACTT+GGG | + | chr8.3:53306203-53306222 | MS.gene59887:CDS | 35.0% | |
| GGCAGAAAAGCAAATTGAAA+GGG | - | chr8.3:53305078-53305097 | None:intergenic | 35.0% | |
| GTTCAAATGTATAGCGAGTT+TGG | - | chr8.3:53310372-53310391 | None:intergenic | 35.0% | |
| TAAATTTGGACCAATGTCAG+TGG | - | chr8.3:53307636-53307655 | None:intergenic | 35.0% | |
| TACCAGTAATTTCGATCGAA+GGG | - | chr8.3:53304874-53304893 | None:intergenic | 35.0% | |
| TATTTGAACTCTGTCTCTTG+AGG | + | chr8.3:53304920-53304939 | MS.gene59887:intron | 35.0% | |
| TCATGAAGAGACAATCTAGT+AGG | - | chr8.3:53309729-53309748 | None:intergenic | 35.0% | |
| TCCAACAGATCTATACATGT+TGG | + | chr8.3:53308591-53308610 | MS.gene59887:CDS | 35.0% | |
| TCTTTCTGTTTCCATCTAAC+AGG | - | chr8.3:53309894-53309913 | None:intergenic | 35.0% | |
| TGAGAGGGAAGACTATTTAT+TGG | + | chr8.3:53306941-53306960 | MS.gene59887:intron | 35.0% | |
| TGGATACATGTTGTTCAACT+TGG | + | chr8.3:53306202-53306221 | MS.gene59887:CDS | 35.0% | |
| TGGGTATAACATGGTTCATA+TGG | - | chr8.3:53307616-53307635 | None:intergenic | 35.0% | |
| TGTCTCAAGTTCAAAACAGA+AGG | + | chr8.3:53308272-53308291 | MS.gene59887:CDS | 35.0% | |
| TTACCAGTAATTTCGATCGA+AGG | - | chr8.3:53304875-53304894 | None:intergenic | 35.0% | |
| TTCTTGACATGCTTCGTTTA+TGG | + | chr8.3:53305471-53305490 | MS.gene59887:CDS | 35.0% | |
| TTGGAACTAAGGATGACAAT+TGG | + | chr8.3:53306564-53306583 | MS.gene59887:intron | 35.0% | |
| TTTGCATGCTAATAACACTC+AGG | + | chr8.3:53306163-53306182 | MS.gene59887:CDS | 35.0% | |
| ! | ACATTCGCTGGAATTACTTT+TGG | + | chr8.3:53305788-53305807 | MS.gene59887:CDS | 35.0% |
| ! | ACTCTAAAAGTTTCAATGGG+AGG | - | chr8.3:53307879-53307898 | None:intergenic | 35.0% |
| ! | TAACGACTGGTACATGTTTT+TGG | + | chr8.3:53307694-53307713 | MS.gene59887:intron | 35.0% |
| ! | TATTTTCCCAATTGGGAATG+TGG | + | chr8.3:53307654-53307673 | MS.gene59887:intron | 35.0% |
| ! | TCCATGTCCTTTTTGAATCA+TGG | - | chr8.3:53306040-53306059 | None:intergenic | 35.0% |
| ! | TTCAGTGTACCCTGATTTTA+AGG | + | chr8.3:53306064-53306083 | MS.gene59887:CDS | 35.0% |
| !! | ATTATAATTGGTGCTGCTTC+TGG | - | chr8.3:53309159-53309178 | None:intergenic | 35.0% |
| !! | CTTTGCGTACTTTTTATTCG+TGG | - | chr8.3:53307329-53307348 | None:intergenic | 35.0% |
| !! | GCTTCTATTTCTGTAACCTA+TGG | - | chr8.3:53308526-53308545 | None:intergenic | 35.0% |
| !! | GGCTGATTTTCAATCATGTT+AGG | - | chr8.3:53309840-53309859 | None:intergenic | 35.0% |
| !! | GGTCAAGAAGATTTAGGTTT+TGG | + | chr8.3:53309696-53309715 | MS.gene59887:CDS | 35.0% |
| !! | TAATGAGTTGATCGGTCATT+AGG | - | chr8.3:53309516-53309535 | None:intergenic | 35.0% |
| !!! | ACTGGTACATGTTTTTGGTA+GGG | + | chr8.3:53307699-53307718 | MS.gene59887:intron | 35.0% |
| !!! | GCATTTATTTTGTCGTGTAG+TGG | + | chr8.3:53307568-53307587 | MS.gene59887:intron | 35.0% |
| !!! | TTTATTTTGTCGTGTAGTGG+TGG | + | chr8.3:53307571-53307590 | MS.gene59887:intron | 35.0% |
| AAATAGGTTCCATCTAACGG+AGG | + | chr8.3:53305871-53305890 | MS.gene59887:intron | 40.0% | |
| ACCAGTAATTTCGATCGAAG+GGG | - | chr8.3:53304873-53304892 | None:intergenic | 40.0% | |
| AGAAGCTAAGTCCTGTTAGA+TGG | + | chr8.3:53309880-53309899 | MS.gene59887:CDS | 40.0% | |
| AGGCTGAAAGAACAAATTCG+AGG | - | chr8.3:53305760-53305779 | None:intergenic | 40.0% | |
| AGGCTTGACAACTAATGACT+TGG | - | chr8.3:53307467-53307486 | None:intergenic | 40.0% | |
| ATATGGTCCACATTCCCAAT+TGG | - | chr8.3:53307664-53307683 | None:intergenic | 40.0% | |
| ATCGGTGAATATGGAGCTAA+TGG | - | chr8.3:53305426-53305445 | None:intergenic | 40.0% | |
| ATGAAACTCTACCTAGACAC+CGG | - | chr8.3:53310240-53310259 | None:intergenic | 40.0% | |
| ATGGAGCTAATGGTTTGAAG+AGG | - | chr8.3:53305416-53305435 | None:intergenic | 40.0% | |
| CAAGACAGAACCAAGTTACA+AGG | + | chr8.3:53310107-53310126 | MS.gene59887:CDS | 40.0% | |
| CAATGTCAGTGGGTATAACA+TGG | - | chr8.3:53307625-53307644 | None:intergenic | 40.0% | |
| CAGATAACCTTAGCCATGTT+AGG | + | chr8.3:53309991-53310010 | MS.gene59887:CDS | 40.0% | |
| CATGTTATACCCACTGACAT+TGG | + | chr8.3:53307623-53307642 | MS.gene59887:intron | 40.0% | |
| CCTCATATGTAAGATTCACG+CGG | - | chr8.3:53307363-53307382 | None:intergenic | 40.0% | |
| GAAACTGCAGGAGAAAAGTT+TGG | + | chr8.3:53310490-53310509 | MS.gene59887:intron | 40.0% | |
| GCAAGTGCAGAAGATACATT+TGG | + | chr8.3:53309021-53309040 | MS.gene59887:CDS | 40.0% | |
| GTCTTGTCCTACATAGTGAA+TGG | - | chr8.3:53310093-53310112 | None:intergenic | 40.0% | |
| TAGACTAGTACTACATGGTC+TGG | + | chr8.3:53307997-53308016 | MS.gene59887:intron | 40.0% | |
| TAGCGAGTTTGGCAAAATCA+CGG | - | chr8.3:53310361-53310380 | None:intergenic | 40.0% | |
| TATGGTCCACATTCCCAATT+GGG | - | chr8.3:53307663-53307682 | None:intergenic | 40.0% | |
| TCATCTACCACATGAAACAC+AGG | + | chr8.3:53308229-53308248 | MS.gene59887:CDS | 40.0% | |
| TCGATGCTTAAAGCTCATTG+CGG | + | chr8.3:53305813-53305832 | MS.gene59887:CDS | 40.0% | |
| TCGTTGTCTATATACCGCAT+CGG | + | chr8.3:53308039-53308058 | MS.gene59887:intron | 40.0% | |
| TGAAGAGACAATCTAGTAGG+CGG | - | chr8.3:53309726-53309745 | None:intergenic | 40.0% | |
| TGTAAATAATGCCGGTGTCT+AGG | + | chr8.3:53310226-53310245 | MS.gene59887:intron | 40.0% | |
| TTCTAGTGCTTTACTCTGCA+TGG | + | chr8.3:53305046-53305065 | MS.gene59887:CDS | 40.0% | |
| ! | AACTGTGCTTTCGAGTATCA+CGG | + | chr8.3:53305722-53305741 | MS.gene59887:intron | 40.0% |
| ! | ATTTCAGGTACCTATGTACC+TGG | + | chr8.3:53305363-53305382 | MS.gene59887:intron | 40.0% |
| ! | CAGGAGATGTTGTTTGACAT+TGG | + | chr8.3:53306182-53306201 | MS.gene59887:CDS | 40.0% |
| ! | CCCATGTTTTCCTTGTAACT+TGG | - | chr8.3:53310120-53310139 | None:intergenic | 40.0% |
| ! | CTTGTGAAACTCTTTGGAAG+AGG | - | chr8.3:53308391-53308410 | None:intergenic | 40.0% |
| ! | GATCTATACATGTTGGTCTC+AGG | + | chr8.3:53308598-53308617 | MS.gene59887:CDS | 40.0% |
| ! | GGGTGCAACAGTTAGATTTT+CGG | + | chr8.3:53307719-53307738 | MS.gene59887:intron | 40.0% |
| ! | TCCAGCGAATGTTTTTCTCA+AGG | - | chr8.3:53305780-53305799 | None:intergenic | 40.0% |
| ! | TCTAGAACGCGATTAAGTGT+AGG | - | chr8.3:53305648-53305667 | None:intergenic | 40.0% |
| ! | TGAAACTCTTTGGAAGAGGT+AGG | - | chr8.3:53308387-53308406 | None:intergenic | 40.0% |
| ! | TGCTTCTGGATTTGCTTGTA+AGG | - | chr8.3:53309145-53309164 | None:intergenic | 40.0% |
| ! | TGTTACTTAACGCACCAAGT+AGG | - | chr8.3:53307038-53307057 | None:intergenic | 40.0% |
| !! | ATAATGAGTTGGTCGGTCAT+TGG | + | chr8.3:53309421-53309440 | MS.gene59887:intron | 40.0% |
| !! | TAATTTGGGTTGCGACATCA+AGG | - | chr8.3:53305681-53305700 | None:intergenic | 40.0% |
| !! | TTGACAGCTCACGTTTTGTT+TGG | - | chr8.3:53307840-53307859 | None:intergenic | 40.0% |
| !!! | GACTGGTACATGTTTTTGGT+AGG | + | chr8.3:53307698-53307717 | MS.gene59887:intron | 40.0% |
| !!! | TGTCGCTTTTGTCAAAATCG+AGG | - | chr8.3:53310308-53310327 | None:intergenic | 40.0% |
| ACTGCAGGAGAAAAGTTTGG+AGG | + | chr8.3:53310493-53310512 | MS.gene59887:intron | 45.0% | |
| ACTGGTATGTTGCCATCTCT+TGG | + | chr8.3:53304802-53304821 | MS.gene59887:CDS | 45.0% | |
| AGCAGCTCATCCAATGAATC+AGG | - | chr8.3:53310158-53310177 | None:intergenic | 45.0% | |
| AGGTAGGATTTCTGCACAAC+AGG | - | chr8.3:53308371-53308390 | None:intergenic | 45.0% | |
| ATATATGTTGGTCGTGGGGA+GGG | - | chr8.3:53306731-53306750 | None:intergenic | 45.0% | |
| CCAGTAATTTCGATCGAAGG+GGG | - | chr8.3:53304872-53304891 | None:intergenic | 45.0% | |
| CCGCGTGAATCTTACATATG+AGG | + | chr8.3:53307360-53307379 | MS.gene59887:intron | 45.0% | |
| CTGCAGGAGAAAAGTTTGGA+GGG | + | chr8.3:53310494-53310513 | MS.gene59887:intron | 45.0% | |
| GAACCGCGAGAAGATTAGAA+CGG | - | chr8.3:53306431-53306450 | None:intergenic | 45.0% | |
| GAGATGGCAACATACCAGTT+TGG | - | chr8.3:53304801-53304820 | None:intergenic | 45.0% | |
| GAGTCAGTTCTCTCTTTGCA+AGG | + | chr8.3:53305504-53305523 | MS.gene59887:CDS | 45.0% | |
| GATGAGCTGCTCAAGATTGT+TGG | + | chr8.3:53310167-53310186 | MS.gene59887:CDS | 45.0% | |
| GCCTTGAGAAAAACATTCGC+TGG | + | chr8.3:53305776-53305795 | MS.gene59887:intron | 45.0% | |
| GCTGCTATGATCGGTGAATA+TGG | - | chr8.3:53305435-53305454 | None:intergenic | 45.0% | |
| TATATATGTTGGTCGTGGGG+AGG | - | chr8.3:53306732-53306751 | None:intergenic | 45.0% | |
| TCCAAACTCGCTGCTATGAT+CGG | - | chr8.3:53305444-53305463 | None:intergenic | 45.0% | |
| TGATCGGTCATTAGGTGATG+TGG | - | chr8.3:53309508-53309527 | None:intergenic | 45.0% | |
| TGGGCTGATGAATTCCAAAC+TGG | + | chr8.3:53304784-53304803 | MS.gene59887:CDS | 45.0% | |
| TGTGATTGAGACCCAAAGTC+CGG | - | chr8.3:53307078-53307097 | None:intergenic | 45.0% | |
| TTGTTTGCAGTACACTGTGC+AGG | + | chr8.3:53305984-53306003 | MS.gene59887:CDS | 45.0% | |
| ! | ATGCTTGCGCGAATTGCTTT+TGG | - | chr8.3:53308329-53308348 | None:intergenic | 45.0% |
| ! | GACCTTTGTGTCATTCGAGA+CGG | + | chr8.3:53310562-53310581 | MS.gene59887:CDS | 45.0% |
| ! | GATCTCATTCGCAGTGTTGA+TGG | + | chr8.3:53308715-53308734 | MS.gene59887:CDS | 45.0% |
| !!! | AATAAAAATAAATTTTTTTG+AGG | - | chr8.3:53306868-53306887 | None:intergenic | 5.0% |
| !!! | AATTTTATTTTTTTTTTTGA+AGG | - | chr8.3:53307490-53307509 | None:intergenic | 5.0% |
| !!! | TATATATTTTATATATATGT+TGG | - | chr8.3:53306743-53306762 | None:intergenic | 5.0% |
| !!! | TTAATAGTATATTTTTAAAT+TGG | + | chr8.3:53307237-53307256 | MS.gene59887:intron | 5.0% |
| ACCGATCATAGCAGCGAGTT+TGG | + | chr8.3:53305440-53305459 | MS.gene59887:CDS | 50.0% | |
| CACCGTCTCGAATGACACAA+AGG | - | chr8.3:53310567-53310586 | None:intergenic | 50.0% | |
| CCCCCTTCGATCGAAATTAC+TGG | + | chr8.3:53304869-53304888 | MS.gene59887:CDS | 50.0% | |
| CGTAACGCGAAGTTGACACA+TGG | + | chr8.3:53304958-53304977 | MS.gene59887:intron | 50.0% | |
| GAGAAAAGTTTGGAGGGCCA+AGG | + | chr8.3:53310500-53310519 | MS.gene59887:CDS | 50.0% | |
| GGTCACTCCTAACATGGCTA+AGG | - | chr8.3:53310001-53310020 | None:intergenic | 50.0% | |
| GGTCCGTTCTAATCTTCTCG+CGG | + | chr8.3:53306425-53306444 | MS.gene59887:intron | 50.0% | |
| TGGACTCTTGCTCCAAGAGA+TGG | - | chr8.3:53304817-53304836 | None:intergenic | 50.0% | |
| ! | CATGTTGGTCTCAGGATCAG+TGG | + | chr8.3:53308606-53308625 | MS.gene59887:CDS | 50.0% |
| ATTGCAGGGCTTGGGACAAG+TGG | + | chr8.3:53305016-53305035 | MS.gene59887:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 53304778 | 53310630 | 53304778 | ID=MS.gene59887 |
| chr8.3 | mRNA | 53304778 | 53310630 | 53304778 | ID=MS.gene59887.t1;Parent=MS.gene59887 |
| chr8.3 | exon | 53304778 | 53304890 | 53304778 | ID=MS.gene59887.t1.exon1;Parent=MS.gene59887.t1 |
| chr8.3 | CDS | 53304778 | 53304890 | 53304778 | ID=cds.MS.gene59887.t1;Parent=MS.gene59887.t1 |
| chr8.3 | exon | 53305023 | 53305238 | 53305023 | ID=MS.gene59887.t1.exon2;Parent=MS.gene59887.t1 |
| chr8.3 | CDS | 53305023 | 53305238 | 53305023 | ID=cds.MS.gene59887.t1;Parent=MS.gene59887.t1 |
| chr8.3 | exon | 53305370 | 53305525 | 53305370 | ID=MS.gene59887.t1.exon3;Parent=MS.gene59887.t1 |
| chr8.3 | CDS | 53305370 | 53305525 | 53305370 | ID=cds.MS.gene59887.t1;Parent=MS.gene59887.t1 |
| chr8.3 | exon | 53305777 | 53305834 | 53305777 | ID=MS.gene59887.t1.exon4;Parent=MS.gene59887.t1 |
| chr8.3 | CDS | 53305777 | 53305834 | 53305777 | ID=cds.MS.gene59887.t1;Parent=MS.gene59887.t1 |
| chr8.3 | exon | 53305978 | 53306295 | 53305978 | ID=MS.gene59887.t1.exon5;Parent=MS.gene59887.t1 |
| chr8.3 | CDS | 53305978 | 53306295 | 53305978 | ID=cds.MS.gene59887.t1;Parent=MS.gene59887.t1 |
| chr8.3 | exon | 53308188 | 53308427 | 53308188 | ID=MS.gene59887.t1.exon6;Parent=MS.gene59887.t1 |
| chr8.3 | CDS | 53308188 | 53308427 | 53308188 | ID=cds.MS.gene59887.t1;Parent=MS.gene59887.t1 |
| chr8.3 | exon | 53308529 | 53308627 | 53308529 | ID=MS.gene59887.t1.exon7;Parent=MS.gene59887.t1 |
| chr8.3 | CDS | 53308529 | 53308627 | 53308529 | ID=cds.MS.gene59887.t1;Parent=MS.gene59887.t1 |
| chr8.3 | exon | 53308715 | 53308747 | 53308715 | ID=MS.gene59887.t1.exon8;Parent=MS.gene59887.t1 |
| chr8.3 | CDS | 53308715 | 53308747 | 53308715 | ID=cds.MS.gene59887.t1;Parent=MS.gene59887.t1 |
| chr8.3 | exon | 53309009 | 53309194 | 53309009 | ID=MS.gene59887.t1.exon9;Parent=MS.gene59887.t1 |
| chr8.3 | CDS | 53309009 | 53309194 | 53309009 | ID=cds.MS.gene59887.t1;Parent=MS.gene59887.t1 |
| chr8.3 | exon | 53309687 | 53310188 | 53309687 | ID=MS.gene59887.t1.exon10;Parent=MS.gene59887.t1 |
| chr8.3 | CDS | 53309687 | 53310188 | 53309687 | ID=cds.MS.gene59887.t1;Parent=MS.gene59887.t1 |
| chr8.3 | exon | 53310500 | 53310630 | 53310500 | ID=MS.gene59887.t1.exon11;Parent=MS.gene59887.t1 |
| chr8.3 | CDS | 53310500 | 53310630 | 53310500 | ID=cds.MS.gene59887.t1;Parent=MS.gene59887.t1 |
| Gene Sequence |
| Protein sequence |
