AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60381

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60381.t1 MTR_4g098800 99.083 545 5 0 16 560 113 657 0.0 1113
MS.gene60381.t1 MTR_4g098800 99.083 545 5 0 16 560 48 592 0.0 1113
MS.gene60381.t1 MTR_5g014150 80.727 550 101 1 16 560 56 605 0.0 914
MS.gene60381.t1 MTR_7g010820 71.898 548 139 5 16 554 38 579 0.0 774
MS.gene60381.t1 MTR_1g116930 60.183 545 210 6 14 557 33 571 0.0 653
MS.gene60381.t1 MTR_7g005930 60.297 539 207 4 14 551 45 577 0.0 649
MS.gene60381.t1 MTR_7g013270 60.326 552 199 8 14 554 100 642 0.0 639
MS.gene60381.t1 MTR_3g462710 44.045 529 282 7 17 538 37 558 1.78e-147 436
MS.gene60381.t1 MTR_7g067010 43.126 531 288 6 17 541 37 559 3.27e-146 433
MS.gene60381.t1 MTR_4g015080 43.561 528 284 6 17 538 47 566 3.43e-146 433
MS.gene60381.t1 MTR_4g024930 46.741 537 252 8 14 543 46 555 8.47e-146 432
MS.gene60381.t1 MTR_7g098200 37.004 554 328 6 17 559 42 585 1.94e-131 396
MS.gene60381.t1 MTR_7g098230 35.949 548 330 6 23 559 45 582 2.23e-129 391
MS.gene60381.t1 MTR_7g098160 37.951 527 308 5 23 540 52 568 5.82e-129 390
MS.gene60381.t1 MTR_7g098200 37.117 555 316 8 17 559 42 575 3.24e-127 385
MS.gene60381.t1 MTR_3g112460 37.294 547 327 8 16 559 35 568 2.89e-125 379
MS.gene60381.t1 MTR_3g462710 43.709 453 241 7 93 538 4 449 1.82e-123 371
MS.gene60381.t1 MTR_1g075440 37.524 517 304 5 23 530 47 553 3.43e-123 375
MS.gene60381.t1 MTR_5g012270 39.662 532 303 9 20 540 45 569 6.52e-122 371
MS.gene60381.t1 MTR_7g098090 37.899 533 305 8 23 540 52 573 9.70e-122 372
MS.gene60381.t1 MTR_7g098040 37.192 527 312 5 23 540 53 569 2.44e-121 371
MS.gene60381.t1 MTR_1g042310 36.450 524 316 5 23 538 1 515 8.31e-120 365
MS.gene60381.t1 MTR_1g042310 36.450 524 316 5 23 538 8 522 9.80e-120 365
MS.gene60381.t1 MTR_7g098180 37.618 529 308 7 23 540 50 567 3.70e-119 365
MS.gene60381.t1 MTR_1g042310 36.450 524 316 5 23 538 45 559 5.34e-119 364
MS.gene60381.t1 MTR_3g112470 36.813 546 329 8 16 558 35 567 5.56e-119 363
MS.gene60381.t1 MTR_3g112450 35.897 546 338 6 16 559 35 570 6.68e-117 358
MS.gene60381.t1 MTR_5g012290 36.773 533 317 7 20 540 43 567 8.38e-117 358
MS.gene60381.t1 MTR_1g041815 36.571 525 317 4 23 540 46 561 3.20e-115 354
MS.gene60381.t1 MTR_1g041885 36.111 504 312 4 23 525 1 495 1.02e-114 351
MS.gene60381.t1 MTR_7g098220 37.761 527 309 5 23 540 5 521 5.70e-114 350
MS.gene60381.t1 MTR_7g098220 37.761 527 309 5 23 540 49 565 2.19e-113 350
MS.gene60381.t1 MTR_3g069500 35.874 538 321 11 23 551 54 576 3.75e-113 348
MS.gene60381.t1 MTR_1g041835 36.571 525 317 4 23 540 46 561 5.74e-113 348
MS.gene60381.t1 MTR_1g041875 35.785 503 313 4 23 524 48 541 6.58e-113 348
MS.gene60381.t1 MTR_5g055000 35.135 555 343 7 17 560 31 579 2.23e-111 344
MS.gene60381.t1 MTR_7g065080 35.120 541 328 11 23 559 50 571 8.10e-111 342
MS.gene60381.t1 MTR_4g114340 38.403 526 306 9 23 541 43 557 3.10e-109 338
MS.gene60381.t1 MTR_7g098200 36.798 481 281 7 90 559 3 471 5.09e-108 332
MS.gene60381.t1 MTR_3g069440 34.679 545 331 11 23 554 52 584 6.42e-108 335
MS.gene60381.t1 MTR_4g101380 36.862 529 319 8 23 540 46 570 4.34e-107 333
MS.gene60381.t1 MTR_3g014790 34.991 543 308 10 16 540 29 544 3.59e-104 325
MS.gene60381.t1 MTR_4g019580 33.520 537 341 9 23 553 55 581 4.10e-104 325
MS.gene60381.t1 MTR_4g107580 32.973 555 357 4 17 560 37 587 6.05e-104 325
MS.gene60381.t1 MTR_3g072300 35.238 525 322 8 18 534 38 552 9.49e-102 319
MS.gene60381.t1 MTR_3g005010 37.023 524 276 14 24 533 50 533 2.17e-100 314
MS.gene60381.t1 MTR_8g038880 34.672 548 319 10 24 556 40 563 8.03e-100 314
MS.gene60381.t1 MTR_7g088790 34.000 550 336 10 12 540 25 568 1.62e-98 311
MS.gene60381.t1 MTR_3g069420 33.212 548 336 13 23 554 53 586 3.43e-98 310
MS.gene60381.t1 MTR_7g065080 34.531 501 305 11 63 559 3 484 5.19e-98 306
MS.gene60381.t1 MTR_5g085850 35.393 534 326 7 23 553 49 566 9.34e-98 309
MS.gene60381.t1 MTR_4g107530 32.781 543 348 6 17 546 46 584 1.66e-97 309
MS.gene60381.t1 MTR_7g098150 39.512 410 233 6 23 428 52 450 3.14e-97 304
MS.gene60381.t1 MTR_4g033325 35.619 525 297 10 24 538 51 544 4.57e-97 306
MS.gene60381.t1 MTR_7g088825 32.482 548 353 10 17 554 35 575 1.29e-96 306
MS.gene60381.t1 MTR_4g107510 31.157 536 356 4 17 541 49 582 4.15e-95 302
MS.gene60381.t1 MTR_7g006540 33.214 560 340 11 17 551 76 626 2.19e-94 301
MS.gene60381.t1 MTR_1g085090 31.993 547 341 9 19 559 34 555 7.37e-94 299
MS.gene60381.t1 MTR_8g469480 32.671 554 356 9 17 560 51 597 1.30e-93 298
MS.gene60381.t1 MTR_0294s0020 35.741 526 297 10 23 538 50 544 1.44e-93 297
MS.gene60381.t1 MTR_2g005130 34.594 529 318 9 18 540 54 560 2.53e-93 297
MS.gene60381.t1 MTR_5g038060 32.022 534 352 6 17 541 44 575 5.35e-93 297
MS.gene60381.t1 MTR_4g033330 35.478 513 292 11 23 525 50 533 1.67e-92 293
MS.gene60381.t1 MTR_7g088820 33.021 533 342 9 17 540 38 564 1.97e-92 295
MS.gene60381.t1 MTR_4g033315 35.227 528 299 13 23 538 50 546 3.42e-92 293
MS.gene60381.t1 MTR_4g033310 35.227 528 299 13 23 538 50 546 3.42e-92 293
MS.gene60381.t1 MTR_8g469470 31.157 536 357 5 17 541 45 579 3.48e-92 294
MS.gene60381.t1 MTR_2g017750 31.308 543 354 9 16 541 46 586 1.72e-90 290
MS.gene60381.t1 MTR_7g111260 31.685 546 346 9 16 557 31 553 4.90e-90 288
MS.gene60381.t1 MTR_3g100980 31.876 549 345 8 18 553 30 562 5.27e-90 288
MS.gene60381.t1 MTR_7g088820 32.625 518 335 8 46 554 5 517 6.27e-90 287
MS.gene60381.t1 MTR_5g038190 31.002 529 354 6 17 537 37 562 9.02e-89 285
MS.gene60381.t1 MTR_4g033375 36.059 477 261 11 23 486 51 496 9.62e-89 283
MS.gene60381.t1 MTR_8g469310 33.397 527 341 5 16 534 38 562 1.08e-88 285
MS.gene60381.t1 MTR_4g123537 33.333 525 334 7 20 541 57 568 6.40e-88 284
MS.gene60381.t1 MTR_8g087780 32.485 511 329 7 19 514 36 545 2.07e-85 276
MS.gene60381.t1 MTR_4g033395 34.810 474 271 11 23 486 51 496 4.47e-85 273
MS.gene60381.t1 MTR_5g038380 32.532 541 334 9 20 541 44 572 1.60e-84 274
MS.gene60381.t1 MTR_3g100980 29.809 577 348 9 18 553 30 590 5.82e-84 273
MS.gene60381.t1 MTR_4g033325 36.235 425 241 8 124 538 16 420 2.11e-83 266
MS.gene60381.t1 MTR_4g033325 36.235 425 241 8 124 538 42 446 4.07e-83 267
MS.gene60381.t1 MTR_7g088820 33.261 460 292 9 90 540 1 454 2.75e-81 263
MS.gene60381.t1 MTR_4g107670 30.280 535 341 11 20 534 40 562 1.53e-79 261
MS.gene60381.t1 MTR_4g033385 35.059 425 249 9 124 538 40 447 3.19e-79 256
MS.gene60381.t1 MTR_1g026740 29.336 542 357 9 18 548 31 557 1.52e-78 258
MS.gene60381.t1 MTR_8g087810 33.148 540 341 9 18 541 38 573 6.46e-78 257
MS.gene60381.t1 MTR_1g026750 30.419 549 354 9 17 553 31 563 1.61e-77 255
MS.gene60381.t1 MTR_1g026770 29.508 549 358 10 17 553 28 559 3.06e-77 254
MS.gene60381.t1 MTR_4g107610 30.361 527 357 6 17 536 44 567 2.60e-76 253
MS.gene60381.t1 MTR_8g103233 30.000 530 353 9 17 537 30 550 1.01e-75 251
MS.gene60381.t1 MTR_7g064780 28.702 547 378 8 17 553 39 583 5.41e-73 244
MS.gene60381.t1 MTR_6g008690 31.159 552 324 11 14 542 17 535 1.25e-72 241
MS.gene60381.t1 MTR_7g098210 29.167 528 275 10 23 540 1 439 3.24e-70 233
MS.gene60381.t1 MTR_1g057460 30.410 536 327 16 17 537 57 561 4.11e-68 231
MS.gene60381.t1 MTR_2g101640 28.060 531 365 8 17 537 36 559 4.12e-68 232
MS.gene60381.t1 MTR_4g011280 28.597 549 372 11 17 554 45 584 7.85e-68 230
MS.gene60381.t1 MTR_2g093160 29.699 532 350 10 22 551 39 548 3.60e-67 227
MS.gene60381.t1 MTR_1g057460 30.977 481 304 13 63 537 32 490 6.29e-67 226
MS.gene60381.t1 MTR_2g101650 28.625 531 362 8 17 537 37 560 2.86e-66 226
MS.gene60381.t1 MTR_2g093180 29.401 534 350 10 22 551 39 549 4.56e-66 224
MS.gene60381.t1 MTR_2g101610 28.860 544 344 12 17 537 40 563 4.70e-66 226
MS.gene60381.t1 MTR_2g101590 28.676 544 345 12 17 537 39 562 4.43e-64 221
MS.gene60381.t1 MTR_1g009200 28.519 547 370 10 16 551 39 575 4.58e-64 220
MS.gene60381.t1 MTR_2g093640 29.314 539 343 10 22 551 39 548 8.67e-64 218
MS.gene60381.t1 MTR_0236s0050 30.208 480 309 12 63 537 32 490 6.29e-63 215
MS.gene60381.t1 MTR_7g064800 28.339 554 381 9 17 557 39 589 8.97e-63 217
MS.gene60381.t1 MTR_2g101560 28.518 533 360 8 17 537 40 563 1.74e-55 197
MS.gene60381.t1 MTR_7g052600 30.019 513 321 11 29 540 50 525 3.10e-53 189
MS.gene60381.t1 MTR_7g051830 29.240 513 325 10 29 540 50 525 2.58e-52 187
MS.gene60381.t1 MTR_7g051880 28.932 515 324 10 29 540 50 525 1.20e-50 182
MS.gene60381.t1 MTR_4g033310 36.727 275 156 6 272 538 218 482 3.61e-50 180
MS.gene60381.t1 MTR_4g033310 36.424 151 85 2 23 173 50 189 1.51e-22 101
MS.gene60381.t1 MTR_1g009170 23.881 402 243 12 131 522 9 357 9.05e-27 112
MS.gene60381.t1 MTR_3g065350 33.333 159 105 1 317 475 1 158 1.62e-25 103
MS.gene60381.t1 MTR_8g091265 36.449 107 66 2 276 380 3 109 1.76e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60381.t1 AT1G32450 75.092 546 128 3 16 553 49 594 0.0 847
MS.gene60381.t1 AT4G21680 69.797 543 152 4 16 549 40 579 0.0 757
MS.gene60381.t1 AT5G19640 60.935 535 191 5 14 546 69 587 0.0 649
MS.gene60381.t1 AT3G54140 43.691 531 287 6 17 541 37 561 4.01e-157 461
MS.gene60381.t1 AT3G54140 43.691 531 287 6 17 541 37 561 4.01e-157 461
MS.gene60381.t1 AT2G02040 42.481 532 295 5 17 542 54 580 3.19e-150 444
MS.gene60381.t1 AT1G62200 42.939 524 292 5 17 538 65 583 1.75e-149 442
MS.gene60381.t1 AT1G62200 40.687 553 292 6 17 538 65 612 5.31e-143 427
MS.gene60381.t1 AT1G62200 40.687 553 292 6 17 538 79 626 5.57e-143 427
MS.gene60381.t1 AT5G01180 40.381 525 298 6 23 540 44 560 5.80e-137 409
MS.gene60381.t1 AT5G01180 40.381 525 298 6 23 540 44 560 5.80e-137 409
MS.gene60381.t1 AT5G01180 40.381 525 298 6 23 540 44 560 5.80e-137 409
MS.gene60381.t1 AT2G02020 40.381 525 261 8 17 534 55 534 1.28e-129 390
MS.gene60381.t1 AT3G54450 37.937 543 298 9 24 551 32 550 6.61e-121 368
MS.gene60381.t1 AT2G26690 39.048 525 303 7 23 541 10 523 7.89e-115 352
MS.gene60381.t1 AT2G26690 38.734 537 309 8 11 541 34 556 1.26e-114 352
MS.gene60381.t1 AT2G26690 39.155 521 300 7 27 541 2 511 1.89e-114 350
MS.gene60381.t1 AT5G46050 35.882 510 307 6 23 523 46 544 1.16e-110 342
MS.gene60381.t1 AT2G02020 36.762 525 259 10 17 534 55 513 7.99e-107 330
MS.gene60381.t1 AT5G46040 35.029 511 312 6 23 524 46 545 3.18e-106 331
MS.gene60381.t1 AT1G12110 36.298 551 333 8 18 556 41 585 1.84e-104 326
MS.gene60381.t1 AT2G37900 33.269 517 332 7 23 538 57 561 7.32e-104 324
MS.gene60381.t1 AT1G69870 33.333 531 346 6 17 541 64 592 8.07e-103 323
MS.gene60381.t1 AT5G13400 34.239 552 341 6 17 553 77 621 1.10e-102 323
MS.gene60381.t1 AT3G53960 33.269 520 334 7 23 537 56 567 4.04e-102 321
MS.gene60381.t1 AT1G68570 34.615 546 345 6 17 553 6 548 3.33e-101 317
MS.gene60381.t1 AT1G68570 34.615 546 345 6 17 553 36 578 9.60e-101 317
MS.gene60381.t1 AT2G40460 35.795 528 315 7 18 537 38 549 1.03e-100 317
MS.gene60381.t1 AT3G21670 35.687 524 309 7 27 541 52 556 3.89e-96 305
MS.gene60381.t1 AT2G37900 32.657 493 319 7 47 538 2 482 4.56e-96 301
MS.gene60381.t1 AT1G27080 35.046 545 339 10 17 556 27 561 1.67e-94 300
MS.gene60381.t1 AT1G72130 36.090 532 291 9 16 538 37 528 2.24e-94 298
MS.gene60381.t1 AT1G59740 33.764 542 340 12 18 552 55 584 2.78e-93 297
MS.gene60381.t1 AT5G46050 36.795 443 258 7 90 523 3 432 3.24e-93 293
MS.gene60381.t1 AT1G72140 34.463 531 295 9 24 538 54 547 1.69e-92 294
MS.gene60381.t1 AT1G22540 35.272 533 308 10 24 546 50 555 2.68e-91 291
MS.gene60381.t1 AT1G27080 34.972 529 329 10 33 556 1 519 2.77e-91 290
MS.gene60381.t1 AT1G18880 31.047 554 364 6 17 557 32 580 1.82e-86 279
MS.gene60381.t1 AT1G72125 33.586 527 314 8 24 538 49 551 1.38e-85 276
MS.gene60381.t1 AT1G33440 33.396 530 332 9 18 540 52 567 4.25e-85 276
MS.gene60381.t1 AT1G22550 33.706 537 302 12 24 538 50 554 7.34e-85 275
MS.gene60381.t1 AT1G72120 33.397 527 311 9 24 538 49 547 2.51e-84 273
MS.gene60381.t1 AT3G47960 30.387 543 350 8 17 541 74 606 7.54e-84 274
MS.gene60381.t1 AT5G62680 30.331 544 351 8 17 541 56 590 7.86e-84 273
MS.gene60381.t1 AT1G69850 31.707 533 343 6 20 534 41 570 2.53e-83 271
MS.gene60381.t1 AT1G22570 32.233 515 306 12 24 521 13 501 2.80e-81 264
MS.gene60381.t1 AT1G22570 32.233 515 306 12 24 521 50 538 7.35e-81 264
MS.gene60381.t1 AT5G14940 30.769 572 324 13 14 554 17 547 1.61e-79 260
MS.gene60381.t1 AT3G45720 27.872 531 361 7 26 553 41 552 1.73e-79 260
MS.gene60381.t1 AT1G27040 30.206 533 349 6 20 543 11 529 3.70e-78 256
MS.gene60381.t1 AT1G27040 30.206 533 349 6 20 543 39 557 1.77e-77 255
MS.gene60381.t1 AT1G27040 30.206 533 349 6 20 543 43 561 1.88e-77 255
MS.gene60381.t1 AT3G45650 30.344 524 331 9 22 537 40 537 2.89e-77 254
MS.gene60381.t1 AT1G72130 35.172 435 243 8 113 538 6 410 5.32e-77 249
MS.gene60381.t1 AT1G72130 35.172 435 243 8 113 538 6 410 5.32e-77 249
MS.gene60381.t1 AT3G45710 27.985 536 365 8 26 559 43 559 1.26e-76 253
MS.gene60381.t1 AT3G45680 28.571 532 358 8 26 555 42 553 1.18e-75 250
MS.gene60381.t1 AT3G45660 28.597 556 356 10 6 553 30 552 3.32e-75 249
MS.gene60381.t1 AT3G45660 28.597 556 356 10 6 553 30 552 3.32e-75 249
MS.gene60381.t1 AT3G45660 28.597 556 356 10 6 553 51 573 3.41e-75 249
MS.gene60381.t1 AT5G62730 29.596 544 323 8 16 534 9 517 1.87e-74 246
MS.gene60381.t1 AT5G62730 29.596 544 323 8 16 534 68 576 7.77e-74 246
MS.gene60381.t1 AT1G52190 27.881 538 363 10 17 537 34 563 7.08e-73 244
MS.gene60381.t1 AT3G45650 29.091 550 330 10 22 537 40 563 1.37e-72 243
MS.gene60381.t1 AT3G16180 29.609 537 352 11 17 537 36 562 5.40e-72 241
MS.gene60381.t1 AT3G01350 28.720 578 338 13 14 554 17 557 1.04e-67 229
MS.gene60381.t1 AT3G45700 25.981 535 367 10 22 554 34 541 3.16e-67 228
MS.gene60381.t1 AT3G25260 28.679 530 322 12 16 538 33 513 5.52e-66 223
MS.gene60381.t1 AT1G69860 30.246 529 353 9 17 541 31 547 3.11e-65 222
MS.gene60381.t1 AT3G45690 26.355 535 334 9 22 555 36 511 3.22e-63 216
MS.gene60381.t1 AT5G28470 26.346 520 372 6 18 533 34 546 2.05e-60 209
MS.gene60381.t1 AT5G28470 26.154 520 371 7 18 533 34 544 1.22e-57 202
MS.gene60381.t1 AT3G25280 27.767 533 321 15 20 538 37 519 1.15e-54 193
MS.gene60381.t1 AT5G11570 28.083 527 296 11 17 538 26 474 1.28e-54 192
MS.gene60381.t1 AT2G38100 25.192 520 327 18 32 533 2 477 6.88e-34 135
MS.gene60381.t1 AT2G38100 25.283 530 333 19 22 533 9 493 7.28e-34 135
MS.gene60381.t1 AT2G38100 25.283 530 333 19 22 533 15 499 7.77e-34 135

Find 102 sgRNAs with CRISPR-Local

Find 155 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTATGGGCTCTTGGGTTT+TGG 0.139139 8.1:-23937169 MS.gene60381:CDS
GGTTTAAAGTGTCTATATTT+TGG 0.157297 8.1:+23937095 None:intergenic
CTTTCCTTAGTGATTCTTAT+TGG 0.168379 8.1:-23937643 MS.gene60381:CDS
TACTAAGACTTCTTCCAATT+TGG 0.183807 8.1:-23936509 MS.gene60381:CDS
CTAGCAACCTTAGCATTCTT+TGG 0.234711 8.1:-23937782 MS.gene60381:CDS
TTTCCTTAGTGATTCTTATT+GGG 0.235185 8.1:-23937642 MS.gene60381:CDS
ACTTCTTCAACTTGAGTAAT+AGG 0.241585 8.1:+23936540 None:intergenic
ATTCCTCAGTATGCACTTAT+AGG 0.250210 8.1:-23936138 MS.gene60381:CDS
TATAACTTCAAGAGATTTAG+AGG 0.282564 8.1:-23936601 MS.gene60381:CDS
CTGGAATAGTGGAATGTTAT+AGG 0.286030 8.1:-23936212 MS.gene60381:CDS
GTTTACATCTTCTCTCTTGT+TGG 0.299285 8.1:-23937668 MS.gene60381:CDS
ATTATTGTGCAAAGCCAAAT+TGG 0.326777 8.1:+23936495 None:intergenic
TTTCCATTTCCACAACCTTT+TGG 0.329693 8.1:+23937431 None:intergenic
CAACCAAACATTGCAACATT+TGG 0.338350 8.1:-23937323 MS.gene60381:CDS
TGACCTCTATTCAAGTTTCC+AGG 0.340603 8.1:+23935931 None:intergenic
TTGAGTGATCCTCATCAAAT+TGG 0.346545 8.1:+23937294 None:intergenic
AGAGATTTAGAGGTCCAAAA+AGG 0.353250 8.1:-23936591 MS.gene60381:CDS
GGAACATTCAAGTTTGGAAA+TGG 0.377855 8.1:-23937396 MS.gene60381:CDS
ATGTGGGGAACATTCAAGTT+TGG 0.379230 8.1:-23937402 MS.gene60381:CDS
CCTGATGGATTGAAGAGCTT+TGG 0.380582 8.1:-23936060 MS.gene60381:CDS
AGACCAAAAGGTTGTGGAAA+TGG 0.381408 8.1:-23937434 MS.gene60381:CDS
ACCTTAGCATTCTTTGGAGT+TGG 0.386511 8.1:-23937776 MS.gene60381:CDS
GCACCAAATGTTGCAATGTT+TGG 0.396893 8.1:+23937320 None:intergenic
TCTGTTCCTGACAAGGGTGT+TGG 0.404195 8.1:-23937741 MS.gene60381:CDS
AAAACATGTGCTATCTTTCA+AGG 0.405049 8.1:-23937611 MS.gene60381:CDS
TTTGCTGCTTCAAGGAAATT+GGG 0.409217 8.1:-23937035 MS.gene60381:CDS
CTGTTCCTGACAAGGGTGTT+GGG 0.412390 8.1:-23937740 MS.gene60381:CDS
GGAGTTCAAATGACATCAAA+TGG 0.415747 8.1:-23937014 MS.gene60381:CDS
GATGAAGGATTATGGGCTCT+TGG 0.416318 8.1:-23937176 MS.gene60381:CDS
ATGAAGGATTATGGGCTCTT+GGG 0.420386 8.1:-23937175 MS.gene60381:CDS
CTTGACCCAACACCCTTGTC+AGG 0.427124 8.1:+23937735 None:intergenic
CAAGCTCTCTAAGTATCTTC+TGG 0.430069 8.1:-23936164 MS.gene60381:CDS
TTCAATGCTCAAACACCTGA+TGG 0.444902 8.1:-23936075 MS.gene60381:CDS
CTTGCTTTGCTTAGACCAAA+AGG 0.446216 8.1:-23937446 MS.gene60381:CDS
GAACATTCAAGTTTGGAAAT+GGG 0.449440 8.1:-23937395 MS.gene60381:CDS
GTTGCTAGACCTTGGTTCAC+TGG 0.450344 8.1:+23937797 None:intergenic
CTTGTATGTCACAGATGAAA+AGG 0.451621 8.1:-23936985 MS.gene60381:CDS
TCGAAGCTAGACATGCTTGC+TGG 0.451741 8.1:+23936384 None:intergenic
AGGCTATCAGATAGATTGAT+AGG 0.454195 8.1:+23937363 None:intergenic
AAGAAGTCAAAACAGCCAAT+AGG 0.459055 8.1:+23935890 None:intergenic
TATCTGATAGCCTTAGGAAA+TGG 0.460404 8.1:-23937353 MS.gene60381:CDS
GATTAAACTTTGCAGCTACT+AGG 0.462340 8.1:+23935787 None:intergenic
CTCACTGAACTTCAAAGAAT+GGG 0.463268 8.1:-23936273 MS.gene60381:CDS
CCAAAGCTCTTCAATCCATC+AGG 0.464327 8.1:+23936060 None:intergenic
TTGCTTAGACCAAAAGGTTG+TGG 0.464656 8.1:-23937440 MS.gene60381:CDS
TGAATAGAGGTCACTTGGAT+AGG 0.471177 8.1:-23935921 MS.gene60381:CDS
TCAATCTATCTGATAGCCTT+AGG 0.473052 8.1:-23937359 MS.gene60381:CDS
ACTCACTGAACTTCAAAGAA+TGG 0.482231 8.1:-23936274 MS.gene60381:CDS
TTCCTTAGTGATTCTTATTG+GGG 0.487486 8.1:-23937641 MS.gene60381:CDS
TTGATATCCTCCATTTCCTA+AGG 0.501268 8.1:+23937343 None:intergenic
AAGTTTCCAGGGATCCATCC+TGG 0.501655 8.1:+23935943 None:intergenic
TTGAAGTTCAGTGAGTCCCT+TGG 0.502306 8.1:+23936281 None:intergenic
CGAGTACTTGATCCACTTGT+CGG 0.511632 8.1:-23936324 MS.gene60381:CDS
TCAACTGAAGATCACATGCC+AGG 0.517301 8.1:-23935961 MS.gene60381:CDS
CACATGCCAGGATGGATCCC+TGG 0.519851 8.1:-23935949 MS.gene60381:CDS
AAAGGAGAGTTATTCAAAAG+TGG 0.523525 8.1:-23937273 MS.gene60381:CDS
GAACTTCAAAGAATGGGAAT+CGG 0.527583 8.1:-23936267 MS.gene60381:CDS
ATAATCGCAATGGTTACAGC+TGG 0.529971 8.1:-23936231 MS.gene60381:CDS
CCCTTGTCAGGAACAGAACT+AGG 0.535224 8.1:+23937747 None:intergenic
AATGGTTACAGCTGGAATAG+TGG 0.536685 8.1:-23936223 MS.gene60381:CDS
AAAGATACCATGGGTTATGT+TGG 0.537608 8.1:+23936565 None:intergenic
ATGCTAAGGTTGCTAGACCT+TGG 0.541001 8.1:+23937789 None:intergenic
TTCCCCAATAAGAATCACTA+AGG 0.545318 8.1:+23937639 None:intergenic
TGTGTGGAGAATCTTTCTGT+TGG 0.546243 8.1:+23936947 None:intergenic
AAACTTGAATAGAGGTCACT+TGG 0.546503 8.1:-23935926 MS.gene60381:CDS
GTGGTTTCAGAATATTCAGA+TGG 0.554184 8.1:-23935836 MS.gene60381:CDS
CTGAAGATCACATGCCAGGA+TGG 0.554639 8.1:-23935957 MS.gene60381:CDS
TGCATGACAAGTATCTCACT+TGG 0.556372 8.1:-23936027 MS.gene60381:CDS
ACCTAGTTCTGTTCCTGACA+AGG 0.556376 8.1:-23937748 MS.gene60381:CDS
GACCTCTATTCAAGTTTCCA+GGG 0.557167 8.1:+23935932 None:intergenic
TGCACTTATAGGAGCTTCTG+AGG 0.569295 8.1:-23936127 MS.gene60381:CDS
ACGGTAGAAGAAAATGAAGA+TGG 0.571774 8.1:+23936347 None:intergenic
CTGATAGCCTTAGGAAATGG+AGG 0.572975 8.1:-23937350 MS.gene60381:CDS
ACTTGGCAGAATCTAGAAAG+AGG 0.576464 8.1:+23937062 None:intergenic
GAAATGGAAAACTTGAATGT+GGG 0.577470 8.1:-23937418 MS.gene60381:CDS
CAAAGCAAGGTATGTTGTAA+CGG 0.578717 8.1:+23937460 None:intergenic
CTGCTAACAATGTTAGCAAG+TGG 0.580663 8.1:-23937700 MS.gene60381:CDS
TATAGACACTTTAAACCTTG+TGG 0.582951 8.1:-23937089 MS.gene60381:CDS
ATCCCTGGAAACTTGAATAG+AGG 0.584308 8.1:-23935934 MS.gene60381:CDS
CGTTATAGCTATAATCGCAA+TGG 0.587150 8.1:-23936241 MS.gene60381:CDS
AACAATGTTAGCAAGTGGAC+TGG 0.597557 8.1:-23937695 MS.gene60381:CDS
TCCAACTCCAAAGAATGCTA+AGG 0.597785 8.1:+23937775 None:intergenic
GGAAATGGAAAACTTGAATG+TGG 0.600088 8.1:-23937419 MS.gene60381:CDS
AGAAAGATTCTCCACACACA+TGG 0.616507 8.1:-23936942 MS.gene60381:CDS
CTTATATTGCATGTGCAAAG+TGG 0.617065 8.1:-23935855 MS.gene60381:CDS
CTAGAAAGAGGATTGCCACA+AGG 0.617266 8.1:+23937074 None:intergenic
CCTAGTTCTGTTCCTGACAA+GGG 0.617734 8.1:-23937747 MS.gene60381:CDS
GCATGACAAGTATCTCACTT+GGG 0.623076 8.1:-23936026 MS.gene60381:CDS
GTAATAGGACAAAGATACCA+TGG 0.629501 8.1:+23936555 None:intergenic
AGGCTTAAGTATGCAAAACA+AGG 0.635128 8.1:-23936192 MS.gene60381:CDS
TGGTGCTGACCAATTTGATG+AGG 0.636240 8.1:-23937303 MS.gene60381:CDS
ATTTGATGAGGATCACTCAA+AGG 0.639587 8.1:-23937291 MS.gene60381:CDS
AAGCTAGACATGCTTGCTGG+TGG 0.641340 8.1:+23936387 None:intergenic
TAATAGGACAAAGATACCAT+GGG 0.644527 8.1:+23936556 None:intergenic
AAGGAGGCCAACATAACCCA+TGG 0.645622 8.1:-23936572 MS.gene60381:CDS
TGTTTGAGAAAAGTGAACCA+AGG 0.671848 8.1:+23937219 None:intergenic
CTTACTTGAAACCATGTGTG+TGG 0.695295 8.1:+23936931 None:intergenic
AAATGAAGATGGCTACGCTG+AGG 0.695724 8.1:+23936358 None:intergenic
TTTAATCTACCAGTGAACCA+AGG 0.698549 8.1:-23937806 MS.gene60381:CDS
AAATGGAAAACTTGAATGTG+GGG 0.708899 8.1:-23937417 MS.gene60381:CDS
CAAGTGGATCAAGTACTCGA+CGG 0.715679 8.1:+23936328 None:intergenic
GCTCCTATAAGTGCATACTG+AGG 0.719671 8.1:+23936135 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTAAGAAATTAATTAAAG+TGG + chr8.1:23936085-23936104 None:intergenic 15.0%
!!! TAATTTGTTCATTTATGTTA+TGG - chr8.1:23936116-23936135 MS.gene60381:CDS 15.0%
!! ATAGATGATAAATGGAAAAT+TGG + chr8.1:23936979-23936998 None:intergenic 20.0%
!! ATATAAGTCATAATTGCATT+TGG - chr8.1:23936927-23936946 MS.gene60381:intron 20.0%
!! GTAATTAAACAATAGAACTT+CGG - chr8.1:23936856-23936875 MS.gene60381:intron 20.0%
!!! ATTTTTTAGCTACTTTTACT+TGG - chr8.1:23936379-23936398 MS.gene60381:CDS 20.0%
!!! GTTTAAAGTGTCTATATTTT+GGG + chr8.1:23936535-23936554 None:intergenic 20.0%
!!! TTTAAAGTGTCTATATTTTG+GGG + chr8.1:23936534-23936553 None:intergenic 20.0%
! ATGTTATGGTTTGATATAAC+AGG - chr8.1:23936130-23936149 MS.gene60381:CDS 25.0%
! TATAACTTCAAGAGATTTAG+AGG - chr8.1:23937027-23937046 MS.gene60381:CDS 25.0%
! TGTTATGGTTTGATATAACA+GGG - chr8.1:23936131-23936150 MS.gene60381:CDS 25.0%
! TTGTTTAATTACTCTTTAGC+AGG + chr8.1:23936848-23936867 None:intergenic 25.0%
! TTTCCTTAGTGATTCTTATT+GGG - chr8.1:23935986-23936005 MS.gene60381:CDS 25.0%
!! ACTTTTCTCAAACACTATTT+TGG - chr8.1:23936418-23936437 MS.gene60381:CDS 25.0%
!! CTTTTCTCAAACACTATTTT+GGG - chr8.1:23936419-23936438 MS.gene60381:CDS 25.0%
!!! ATTTTGAAGATGAAGGATTA+TGG - chr8.1:23936444-23936463 MS.gene60381:CDS 25.0%
!!! GGTTTAAAGTGTCTATATTT+TGG + chr8.1:23936536-23936555 None:intergenic 25.0%
!!! TATTTTGAAACTGGAAATAG+TGG + chr8.1:23937221-23937240 None:intergenic 25.0%
!!! TTTTGAAGATGAAGGATTAT+GGG - chr8.1:23936445-23936464 MS.gene60381:CDS 25.0%
AAAACATGTGCTATCTTTCA+AGG - chr8.1:23936017-23936036 MS.gene60381:CDS 30.0%
AAAGGAGAGTTATTCAAAAG+TGG - chr8.1:23936355-23936374 MS.gene60381:CDS 30.0%
AAATGGAAAACTTGAATGTG+GGG - chr8.1:23936211-23936230 MS.gene60381:CDS 30.0%
ACTCAAAAAAACAAGTTCCA+AGG - chr8.1:23937330-23937349 MS.gene60381:CDS 30.0%
ACTTCTTCAACTTGAGTAAT+AGG + chr8.1:23937091-23937110 None:intergenic 30.0%
ATTATTGTGCAAAGCCAAAT+TGG + chr8.1:23937136-23937155 None:intergenic 30.0%
CCATTTATCATCTATATTGC+AGG - chr8.1:23936984-23937003 MS.gene60381:CDS 30.0%
CCTGCAATATAGATGATAAA+TGG + chr8.1:23936987-23937006 None:intergenic 30.0%
CTCAAAAAAACAAGTTCCAA+GGG - chr8.1:23937331-23937350 MS.gene60381:CDS 30.0%
CTTTCCTTAGTGATTCTTAT+TGG - chr8.1:23935985-23936004 MS.gene60381:CDS 30.0%
GAAATGGAAAACTTGAATGT+GGG - chr8.1:23936210-23936229 MS.gene60381:CDS 30.0%
TAATAGGACAAAGATACCAT+GGG + chr8.1:23937075-23937094 None:intergenic 30.0%
TACTAAGACTTCTTCCAATT+TGG - chr8.1:23937119-23937138 MS.gene60381:CDS 30.0%
TATAGACACTTTAAACCTTG+TGG - chr8.1:23936539-23936558 MS.gene60381:CDS 30.0%
TGTAAGCATCAAATCGTTAT+TGG + chr8.1:23936737-23936756 None:intergenic 30.0%
TTCCTTAGTGATTCTTATTG+GGG - chr8.1:23935987-23936006 MS.gene60381:CDS 30.0%
! AAAAAGTACAAGAGCCAAAA+AGG + chr8.1:23936501-23936520 None:intergenic 30.0%
! GAACATTCAAGTTTGGAAAT+GGG - chr8.1:23936233-23936252 MS.gene60381:CDS 30.0%
! TCATCTATATTGCAGGTTTT+TGG - chr8.1:23936991-23937010 MS.gene60381:CDS 30.0%
!! ATATTGCAGGTTTTTGGATA+GGG - chr8.1:23936997-23937016 MS.gene60381:CDS 30.0%
!! TATATTGCAGGTTTTTGGAT+AGG - chr8.1:23936996-23937015 MS.gene60381:CDS 30.0%
!! TCTGAGGTTTTTATGTATGT+AGG - chr8.1:23937517-23937536 MS.gene60381:intron 30.0%
AAACTTGAATAGAGGTCACT+TGG - chr8.1:23937702-23937721 MS.gene60381:CDS 35.0%
AAGAAGTCAAAACAGCCAAT+AGG + chr8.1:23937741-23937760 None:intergenic 35.0%
ACGGTAGAAGAAAATGAAGA+TGG + chr8.1:23937284-23937303 None:intergenic 35.0%
ACTCACTGAACTTCAAAGAA+TGG - chr8.1:23937354-23937373 MS.gene60381:CDS 35.0%
AGAGATTTAGAGGTCCAAAA+AGG - chr8.1:23937037-23937056 MS.gene60381:CDS 35.0%
AGGCTATCAGATAGATTGAT+AGG + chr8.1:23936268-23936287 None:intergenic 35.0%
AGGCTTAAGTATGCAAAACA+AGG - chr8.1:23937436-23937455 MS.gene60381:CDS 35.0%
ATTCCTCAGTATGCACTTAT+AGG - chr8.1:23937490-23937509 MS.gene60381:intron 35.0%
ATTTGATGAGGATCACTCAA+AGG - chr8.1:23936337-23936356 MS.gene60381:CDS 35.0%
CAAAGCAAGGTATGTTGTAA+CGG + chr8.1:23936171-23936190 None:intergenic 35.0%
CAACCAAACATTGCAACATT+TGG - chr8.1:23936305-23936324 MS.gene60381:CDS 35.0%
CATCAAAAACCATTATGTCG+TGG - chr8.1:23936789-23936808 MS.gene60381:intron 35.0%
CGTTATAGCTATAATCGCAA+TGG - chr8.1:23937387-23937406 MS.gene60381:CDS 35.0%
CTCACTGAACTTCAAAGAAT+GGG - chr8.1:23937355-23937374 MS.gene60381:CDS 35.0%
CTTATATTGCATGTGCAAAG+TGG - chr8.1:23937773-23937792 MS.gene60381:CDS 35.0%
CTTGTATGTCACAGATGAAA+AGG - chr8.1:23936643-23936662 MS.gene60381:intron 35.0%
GAACTTCAAAGAATGGGAAT+CGG - chr8.1:23937361-23937380 MS.gene60381:CDS 35.0%
GGAAATGGAAAACTTGAATG+TGG - chr8.1:23936209-23936228 MS.gene60381:CDS 35.0%
GGAGTTCAAATGACATCAAA+TGG - chr8.1:23936614-23936633 MS.gene60381:CDS 35.0%
GTAATAGGACAAAGATACCA+TGG + chr8.1:23937076-23937095 None:intergenic 35.0%
GTGGTTTCAGAATATTCAGA+TGG - chr8.1:23937792-23937811 MS.gene60381:CDS 35.0%
GTTTACATCTTCTCTCTTGT+TGG - chr8.1:23935960-23935979 MS.gene60381:CDS 35.0%
TCAATCTATCTGATAGCCTT+AGG - chr8.1:23936269-23936288 MS.gene60381:CDS 35.0%
TGATGCTTACACTTCAATAG+CGG - chr8.1:23936746-23936765 MS.gene60381:intron 35.0%
TGTTTGAGAAAAGTGAACCA+AGG + chr8.1:23936412-23936431 None:intergenic 35.0%
TTCCCCAATAAGAATCACTA+AGG + chr8.1:23935992-23936011 None:intergenic 35.0%
TTGAAGCAGCAAAAAACACT+TGG + chr8.1:23936586-23936605 None:intergenic 35.0%
TTGAGTGATCCTCATCAAAT+TGG + chr8.1:23936337-23936356 None:intergenic 35.0%
TTGATATCCTCCATTTCCTA+AGG + chr8.1:23936288-23936307 None:intergenic 35.0%
TTTAATCTACCAGTGAACCA+AGG - chr8.1:23935822-23935841 MS.gene60381:CDS 35.0%
! AAAGATACCATGGGTTATGT+TGG + chr8.1:23937066-23937085 None:intergenic 35.0%
! CGACATAATGGTTTTTGATG+TGG + chr8.1:23936789-23936808 None:intergenic 35.0%
! CTCAGTAGTTTTCACTCAAA+TGG - chr8.1:23937159-23937178 MS.gene60381:CDS 35.0%
! CTGGAATAGTGGAATGTTAT+AGG - chr8.1:23937416-23937435 MS.gene60381:CDS 35.0%
! GGAAATAGTGGTTTTCATTG+CGG + chr8.1:23937209-23937228 None:intergenic 35.0%
! GGAACATTCAAGTTTGGAAA+TGG - chr8.1:23936232-23936251 MS.gene60381:CDS 35.0%
! GGATAGGTTTTTCTTCCTAT+TGG - chr8.1:23937723-23937742 MS.gene60381:CDS 35.0%
! TATCTGATAGCCTTAGGAAA+TGG - chr8.1:23936275-23936294 MS.gene60381:CDS 35.0%
! TCAAATGGCTTCTCTTTTTG+TGG - chr8.1:23937174-23937193 MS.gene60381:CDS 35.0%
! TTTCCATTTCCACAACCTTT+TGG + chr8.1:23936200-23936219 None:intergenic 35.0%
! TTTGCTGCTTCAAGGAAATT+GGG - chr8.1:23936593-23936612 MS.gene60381:CDS 35.0%
!! TTGGGCTATTTTGAAGATGA+AGG - chr8.1:23936437-23936456 MS.gene60381:CDS 35.0%
!! TTTTACTTGGCATTGAACCT+TGG - chr8.1:23936392-23936411 MS.gene60381:CDS 35.0%
!! TTTTGCTGCTTCAAGGAAAT+TGG - chr8.1:23936592-23936611 MS.gene60381:CDS 35.0%
!!! AAGTGTTTTTTGCTGCTTCA+AGG - chr8.1:23936585-23936604 MS.gene60381:CDS 35.0%
!!! GCTCTTGTACTTTTTCTTGT+TGG - chr8.1:23936506-23936525 MS.gene60381:CDS 35.0%
!!! TTTTTGAGTTTTCCGACAAG+TGG + chr8.1:23937319-23937338 None:intergenic 35.0%
AACAATGTTAGCAAGTGGAC+TGG - chr8.1:23935933-23935952 MS.gene60381:CDS 40.0%
AATGGTTACAGCTGGAATAG+TGG - chr8.1:23937405-23937424 MS.gene60381:CDS 40.0%
ACTTGGCAGAATCTAGAAAG+AGG + chr8.1:23936569-23936588 None:intergenic 40.0%
AGAAAGATTCTCCACACACA+TGG - chr8.1:23936686-23936705 MS.gene60381:intron 40.0%
AGACCAAAAGGTTGTGGAAA+TGG - chr8.1:23936194-23936213 MS.gene60381:CDS 40.0%
ATAATCGCAATGGTTACAGC+TGG - chr8.1:23937397-23937416 MS.gene60381:CDS 40.0%
ATCCCTGGAAACTTGAATAG+AGG - chr8.1:23937694-23937713 MS.gene60381:CDS 40.0%
ATGAAGGATTATGGGCTCTT+GGG - chr8.1:23936453-23936472 MS.gene60381:CDS 40.0%
CAAGCTCTCTAAGTATCTTC+TGG - chr8.1:23937464-23937483 MS.gene60381:CDS 40.0%
CAATCTTGACCACGACATAA+TGG + chr8.1:23936801-23936820 None:intergenic 40.0%
CTAGCAACCTTAGCATTCTT+TGG - chr8.1:23935846-23935865 MS.gene60381:CDS 40.0%
CTGCTAACAATGTTAGCAAG+TGG - chr8.1:23935928-23935947 MS.gene60381:CDS 40.0%
CTTACTTGAAACCATGTGTG+TGG + chr8.1:23936700-23936719 None:intergenic 40.0%
CTTCGGAAAATAATGAGACG+TGG - chr8.1:23936873-23936892 MS.gene60381:intron 40.0%
CTTGCTTTGCTTAGACCAAA+AGG - chr8.1:23936182-23936201 MS.gene60381:CDS 40.0%
GATTTAGAGGTCCAAAAAGG+AGG - chr8.1:23937040-23937059 MS.gene60381:CDS 40.0%
GCACCAAATGTTGCAATGTT+TGG + chr8.1:23936311-23936330 None:intergenic 40.0%
GCATGACAAGTATCTCACTT+GGG - chr8.1:23937602-23937621 MS.gene60381:CDS 40.0%
TCCAACTCCAAAGAATGCTA+AGG + chr8.1:23935856-23935875 None:intergenic 40.0%
TGAATAGAGGTCACTTGGAT+AGG - chr8.1:23937707-23937726 MS.gene60381:CDS 40.0%
TGCATGACAAGTATCTCACT+TGG - chr8.1:23937601-23937620 MS.gene60381:CDS 40.0%
TGTGTGGAGAATCTTTCTGT+TGG + chr8.1:23936684-23936703 None:intergenic 40.0%
TTATGTCGTGGTCAAGATTG+TGG - chr8.1:23936801-23936820 MS.gene60381:intron 40.0%
TTCAATGCTCAAACACCTGA+TGG - chr8.1:23937553-23937572 MS.gene60381:intron 40.0%
TTGCTTAGACCAAAAGGTTG+TGG - chr8.1:23936188-23936207 MS.gene60381:CDS 40.0%
! ATGTGGGGAACATTCAAGTT+TGG - chr8.1:23936226-23936245 MS.gene60381:CDS 40.0%
! ATTATGGGCTCTTGGGTTTT+GGG - chr8.1:23936460-23936479 MS.gene60381:CDS 40.0%
! CTTTTGGTCTAAGCAAAGCA+AGG + chr8.1:23936184-23936203 None:intergenic 40.0%
! GACCTCTATTCAAGTTTCCA+GGG + chr8.1:23937699-23937718 None:intergenic 40.0%
! TGACCTCTATTCAAGTTTCC+AGG + chr8.1:23937700-23937719 None:intergenic 40.0%
!! ACCTTAGCATTCTTTGGAGT+TGG - chr8.1:23935852-23935871 MS.gene60381:CDS 40.0%
!!! TGCTGGTGGTATTTTGAAAC+TGG + chr8.1:23937230-23937249 None:intergenic 40.0%
AAATGAAGATGGCTACGCTG+AGG + chr8.1:23937273-23937292 None:intergenic 45.0%
ATGCTAAGGTTGCTAGACCT+TGG + chr8.1:23935842-23935861 None:intergenic 45.0%
CAAGTGGATCAAGTACTCGA+CGG + chr8.1:23937303-23937322 None:intergenic 45.0%
CCAAAGCTCTTCAATCCATC+AGG + chr8.1:23937571-23937590 None:intergenic 45.0%
CGAGTACTTGATCCACTTGT+CGG - chr8.1:23937304-23937323 MS.gene60381:CDS 45.0%
CTAGAAAGAGGATTGCCACA+AGG + chr8.1:23936557-23936576 None:intergenic 45.0%
GATGAAGGATTATGGGCTCT+TGG - chr8.1:23936452-23936471 MS.gene60381:CDS 45.0%
GCTCCTATAAGTGCATACTG+AGG + chr8.1:23937496-23937515 None:intergenic 45.0%
TCAACTGAAGATCACATGCC+AGG - chr8.1:23937667-23937686 MS.gene60381:CDS 45.0%
TGCACTTATAGGAGCTTCTG+AGG - chr8.1:23937501-23937520 MS.gene60381:intron 45.0%
TTGAAGTTCAGTGAGTCCCT+TGG + chr8.1:23937350-23937369 None:intergenic 45.0%
! CTGATAGCCTTAGGAAATGG+AGG - chr8.1:23936278-23936297 MS.gene60381:CDS 45.0%
! GATTATGGGCTCTTGGGTTT+TGG - chr8.1:23936459-23936478 MS.gene60381:CDS 45.0%
! GCTTCTCTTTTTGTGGAGCA+AGG - chr8.1:23937181-23937200 MS.gene60381:CDS 45.0%
!! ACCTAGTTCTGTTCCTGACA+AGG - chr8.1:23935880-23935899 MS.gene60381:CDS 45.0%
!! CCTAGTTCTGTTCCTGACAA+GGG - chr8.1:23935881-23935900 MS.gene60381:CDS 45.0%
!! CCTGATGGATTGAAGAGCTT+TGG - chr8.1:23937568-23937587 MS.gene60381:intron 45.0%
!! GGTTATGTTGGCCTCCTTTT+TGG + chr8.1:23937054-23937073 None:intergenic 45.0%
!! TGGTGCTGACCAATTTGATG+AGG - chr8.1:23936325-23936344 MS.gene60381:CDS 45.0%
AAGGAGGCCAACATAACCCA+TGG - chr8.1:23937056-23937075 MS.gene60381:CDS 50.0%
AAGTTTCCAGGGATCCATCC+TGG + chr8.1:23937688-23937707 None:intergenic 50.0%
CCCTTGTCAGGAACAGAACT+AGG + chr8.1:23935884-23935903 None:intergenic 50.0%
CTGAAGATCACATGCCAGGA+TGG - chr8.1:23937671-23937690 MS.gene60381:CDS 50.0%
CTTCAATAGCGGCTACGATG+CGG - chr8.1:23936757-23936776 MS.gene60381:intron 50.0%
GTTGCTAGACCTTGGTTCAC+TGG + chr8.1:23935834-23935853 None:intergenic 50.0%
TCGAAGCTAGACATGCTTGC+TGG + chr8.1:23937247-23937266 None:intergenic 50.0%
! AAGCTAGACATGCTTGCTGG+TGG + chr8.1:23937244-23937263 None:intergenic 50.0%
! TCTGTTCCTGACAAGGGTGT+TGG - chr8.1:23935887-23935906 MS.gene60381:CDS 50.0%
! TTCTGCTGGGTCTGCCTTTT+TGG - chr8.1:23936484-23936503 MS.gene60381:CDS 50.0%
!! CTGTTCCTGACAAGGGTGTT+GGG - chr8.1:23935888-23935907 MS.gene60381:CDS 50.0%
!!! TTGGGTTTTGGGCTTCTGCT+GGG - chr8.1:23936471-23936490 MS.gene60381:CDS 50.0%
ATAGCGGCTACGATGCGGTT+TGG - chr8.1:23936762-23936781 MS.gene60381:intron 55.0%
CTTGACCCAACACCCTTGTC+AGG + chr8.1:23935896-23935915 None:intergenic 55.0%
!!! CTTGGGTTTTGGGCTTCTGC+TGG - chr8.1:23936470-23936489 MS.gene60381:CDS 55.0%
CACATGCCAGGATGGATCCC+TGG - chr8.1:23937679-23937698 MS.gene60381:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 23935789 23937861 23935789 ID=MS.gene60381
chr8.1 mRNA 23935789 23937861 23935789 ID=MS.gene60381.t1;Parent=MS.gene60381
chr8.1 exon 23937598 23937861 23937598 ID=MS.gene60381.t1.exon1;Parent=MS.gene60381.t1
chr8.1 CDS 23937598 23937861 23937598 ID=cds.MS.gene60381.t1;Parent=MS.gene60381.t1
chr8.1 exon 23936936 23937498 23936936 ID=MS.gene60381.t1.exon2;Parent=MS.gene60381.t1
chr8.1 CDS 23936936 23937498 23936936 ID=cds.MS.gene60381.t1;Parent=MS.gene60381.t1
chr8.1 exon 23935789 23936644 23935789 ID=MS.gene60381.t1.exon3;Parent=MS.gene60381.t1
chr8.1 CDS 23935789 23936644 23935789 ID=cds.MS.gene60381.t1;Parent=MS.gene60381.t1
Gene Sequence

>MS.gene60381

ATGATGCTAACAATCTTTAATGTTGTTGATATATTTAATCTACCAGTGAACCAAGGTCTAGCAACCTTAGCATTCTTTGGAGTTGGAGTGAACCTAGTTCTGTTCCTGACAAGGGTGTTGGGTCAAGACAATGCTGCTGCTGCTAACAATGTTAGCAAGTGGACTGGCACAGTTTACATCTTCTCTCTTGTTGGTGCTTTCCTTAGTGATTCTTATTGGGGAAGATACAAAACATGTGCTATCTTTCAAGGCATTTTTGTAACTGTAAGTAATATACTTTCAATTTCATTTTTCCACTTTAATTAATTTCTTACTAGTACATTATATTAATTTGTTCATTTATGTTATGGTTTGATATAACAGGGTCTAGTATCTTTGTCCGTTACAACATACCTTGCTTTGCTTAGACCAAAAGGTTGTGGAAATGGAAAACTTGAATGTGGGGAACATTCAAGTTTGGAAATGGGAATGTTCTACCTATCAATCTATCTGATAGCCTTAGGAAATGGAGGATATCAACCAAACATTGCAACATTTGGTGCTGACCAATTTGATGAGGATCACTCAAAGGAGAGTTATTCAAAAGTGGCATTTTTTAGCTACTTTTACTTGGCATTGAACCTTGGTTCACTTTTCTCAAACACTATTTTGGGCTATTTTGAAGATGAAGGATTATGGGCTCTTGGGTTTTGGGCTTCTGCTGGGTCTGCCTTTTTGGCTCTTGTACTTTTTCTTGTTGGCACCCCAAAATATAGACACTTTAAACCTTGTGGCAATCCTCTTTCTAGATTCTGCCAAGTGTTTTTTGCTGCTTCAAGGAAATTGGGAGTTCAAATGACATCAAATGGAGATGACTTGTATGTCACAGATGAAAAGGAGTCTTCTAACAACTCCAACAGAAAGATTCTCCACACACATGGTTTCAAGTAAGTTATTTGAATACTTCCAATAACGATTTGATGCTTACACTTCAATAGCGGCTACGATGCGGTTTGGACCACATCAAAAACCATTATGTCGTGGTCAAGATTGTGGTCGCAGACTTTTATTTAAAATCCTGCTAAAGAGTAATTAAACAATAGAACTTCGGAAAATAATGAGACGTGGAAGATAAGATTCTTTTTATATTTCTTCTTACATATAAGTCATAATTGCATTTGGAGAAGTTCATCTAGAGTGCTTATTGACCAATTTTCCATTTATCATCTATATTGCAGGTTTTTGGATAGGGCAGCTTATATAACTTCAAGAGATTTAGAGGTCCAAAAAGGAGGCCAACATAACCCATGGTATCTTTGTCCTATTACTCAAGTTGAAGAAGTAAAATGCATACTAAGACTTCTTCCAATTTGGCTTTGCACAATAATCTACTCAGTAGTTTTCACTCAAATGGCTTCTCTTTTTGTGGAGCAAGGCGCCGCAATGAAAACCACTATTTCCAGTTTCAAAATACCACCAGCAAGCATGTCTAGCTTCGACATCCTCAGCGTAGCCATCTTCATTTTCTTCTACCGTCGAGTACTTGATCCACTTGTCGGAAAACTCAAAAAAACAAGTTCCAAGGGACTCACTGAACTTCAAAGAATGGGAATCGGTCTCGTTATAGCTATAATCGCAATGGTTACAGCTGGAATAGTGGAATGTTATAGGCTTAAGTATGCAAAACAAGGTGACGCAAGCTCTCTAAGTATCTTCTGGCAAATTCCTCAGTATGCACTTATAGGAGCTTCTGAGGTTTTTATGTATGTAGGACAATTAGAATTCTTCAATGCTCAAACACCTGATGGATTGAAGAGCTTTGGAAGTGCACTTTGCATGACAAGTATCTCACTTGGGAACTATGTGAGTAGCTTAATTGTTAGTATTGTTATGAAGATTTCAACTGAAGATCACATGCCAGGATGGATCCCTGGAAACTTGAATAGAGGTCACTTGGATAGGTTTTTCTTCCTATTGGCTGTTTTGACTTCTTTAGATTTGATTGCTTATATTGCATGTGCAAAGTGGTTTCAGAATATTCAGATGGAATGCAAATATGATAACAATGATGAGCCTAGTAGCTGCAAAGTTTAA
Protein sequence

>MS.gene60381.t1

MMLTIFNVVDIFNLPVNQGLATLAFFGVGVNLVLFLTRVLGQDNAAAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQGIFVTGLVSLSVTTYLALLRPKGCGNGKLECGEHSSLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEDHSKESYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGLWALGFWASAGSAFLALVLFLVGTPKYRHFKPCGNPLSRFCQVFFAASRKLGVQMTSNGDDLYVTDEKESSNNSNRKILHTHGFKFLDRAAYITSRDLEVQKGGQHNPWYLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISSFKIPPASMSSFDILSVAIFIFFYRRVLDPLVGKLKKTSSKGLTELQRMGIGLVIAIIAMVTAGIVECYRLKYAKQGDASSLSIFWQIPQYALIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLIVSIVMKISTEDHMPGWIPGNLNRGHLDRFFFLLAVLTSLDLIAYIACAKWFQNIQMECKYDNNDEPSSCKV