Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60630.t1 | RHN51920.1 | 69.2 | 321 | 58 | 1 | 42 | 362 | 1 | 280 | 9.40E-115 | 424.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60630.t1 | Q94F30 | 26.5 | 211 | 133 | 9 | 458 | 668 | 271 | 459 | 7.0e-10 | 67.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60630.t1 | A0A396HF22 | 69.2 | 321 | 58 | 1 | 42 | 362 | 1 | 280 | 6.8e-115 | 424.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058870 | MS.gene60630 | 0.890914 | 6.40E-74 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60630.t1 | MTR_8g009990 | 62.250 | 400 | 49 | 4 | 1 | 399 | 1 | 299 | 3.83e-156 | 452 |
| MS.gene60630.t1 | MTR_0008s0230 | 81.319 | 182 | 27 | 2 | 495 | 676 | 17 | 191 | 1.74e-98 | 305 |
| MS.gene60630.t1 | MTR_0186s0120 | 86.066 | 122 | 17 | 0 | 20 | 141 | 1 | 122 | 1.96e-66 | 214 |
| MS.gene60630.t1 | MTR_4g131870 | 91.209 | 91 | 8 | 0 | 1 | 91 | 1 | 91 | 9.49e-51 | 171 |
| MS.gene60630.t1 | MTR_1g054565 | 91.209 | 91 | 8 | 0 | 1 | 91 | 1 | 91 | 9.49e-51 | 171 |
| MS.gene60630.t1 | MTR_1g050130 | 90.110 | 91 | 9 | 0 | 1 | 91 | 1 | 91 | 3.82e-50 | 169 |
| MS.gene60630.t1 | MTR_3g014770 | 90.110 | 91 | 9 | 0 | 1 | 91 | 1 | 91 | 5.69e-50 | 169 |
| MS.gene60630.t1 | MTR_3g014760 | 31.771 | 192 | 119 | 3 | 22 | 213 | 9 | 188 | 2.53e-27 | 113 |
| MS.gene60630.t1 | MTR_4g131860 | 32.812 | 192 | 123 | 3 | 22 | 213 | 9 | 194 | 3.22e-27 | 112 |
| MS.gene60630.t1 | MTR_7g102530 | 32.812 | 192 | 123 | 3 | 22 | 213 | 9 | 194 | 3.55e-27 | 112 |
| MS.gene60630.t1 | MTR_1g050140 | 32.812 | 192 | 123 | 3 | 22 | 213 | 9 | 194 | 5.28e-27 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 164 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCTCTTAGTACCTATAAT+TGG | 0.159588 | 1.2:-69706453 | MS.gene60630:CDS |
| GATACAGTTATACACATTTC+TGG | 0.200591 | 1.2:-69706358 | MS.gene60630:CDS |
| GTAAATATCTACCAACTTAT+TGG | 0.208386 | 1.2:+69706918 | None:intergenic |
| CTAGACCTTTGTTTGGCTTT+AGG | 0.220943 | 1.2:-69706721 | MS.gene60630:CDS |
| ATGCGTGGAAAACGCTTAAT+TGG | 0.267383 | 1.2:+69706189 | None:intergenic |
| TGAGGTAGTTGATGATTTAA+AGG | 0.268632 | 1.2:-69704932 | MS.gene60630:CDS |
| AGATATGTTGGAATCTTCTT+TGG | 0.268674 | 1.2:-69703963 | MS.gene60630:CDS |
| TGAGGGAAAACAAACGAAAA+AGG | 0.283246 | 1.2:-69707074 | MS.gene60630:CDS |
| ACAAAGGTCTAGATGTTTAA+AGG | 0.286497 | 1.2:+69706732 | None:intergenic |
| TTAATATAACTGTGTGATTT+CGG | 0.290724 | 1.2:+69706508 | None:intergenic |
| GAGGATATTAAAAGCAAATA+AGG | 0.296971 | 1.2:-69705807 | MS.gene60630:CDS |
| TGTGGGATGGTGAAGCAAAA+TGG | 0.309075 | 1.2:-69703773 | MS.gene60630:CDS |
| CGCTCTTAGTACCTATAATT+GGG | 0.312086 | 1.2:-69706452 | MS.gene60630:CDS |
| ATTTACCAAAGCAACAAAAT+TGG | 0.312599 | 1.2:-69703925 | MS.gene60630:intron |
| GCTTTAGGTTTGCCTATTGT+AGG | 0.336005 | 1.2:-69706706 | MS.gene60630:CDS |
| GTGGGATGGTGAAGCAAAAT+GGG | 0.336285 | 1.2:-69703772 | MS.gene60630:CDS |
| GCTTAATTGGACCACTGGTT+AGG | 0.336914 | 1.2:+69706202 | None:intergenic |
| CTATTGTAGGAGAGTGTTTA+CGG | 0.340425 | 1.2:-69706693 | MS.gene60630:CDS |
| CATTGGAGTTTACGTCCTTC+AGG | 0.346042 | 1.2:+69704904 | None:intergenic |
| CCTTAGGTTATTAATATTGC+TGG | 0.350091 | 1.2:-69705119 | MS.gene60630:intron |
| AACAGCAACACCCCAATTAT+AGG | 0.367016 | 1.2:+69706441 | None:intergenic |
| ATGTCCAGTGGTCTTCGAAC+TGG | 0.369613 | 1.2:+69704225 | None:intergenic |
| AACCATTCTCAAGTTGGTAT+TGG | 0.370824 | 1.2:-69705941 | MS.gene60630:CDS |
| AATAAAGGAGCGAACAATAA+AGG | 0.374187 | 1.2:-69703986 | MS.gene60630:CDS |
| GTAGATGAGTTGCGTGTTGC+CGG | 0.380253 | 1.2:-69705275 | MS.gene60630:CDS |
| TGGTTGCCCAGCCGTATTGC+AGG | 0.381669 | 1.2:-69706338 | MS.gene60630:intron |
| AACACAAAGATTTGCTTTCC+CGG | 0.385894 | 1.2:-69705853 | MS.gene60630:CDS |
| CTACGTTGTCCCCTTCTTGA+AGG | 0.389579 | 1.2:+69706581 | None:intergenic |
| CTTCCTACTTCCATGCTACT+TGG | 0.397148 | 1.2:+69705758 | None:intergenic |
| GTTTACGGGAAACTAGTGAT+AGG | 0.398980 | 1.2:-69706678 | MS.gene60630:CDS |
| TGATTAGTTGGTTGAGGACT+TGG | 0.400972 | 1.2:-69706011 | MS.gene60630:intron |
| GTGGATATGAAGACCTATAT+AGG | 0.406234 | 1.2:-69706838 | MS.gene60630:CDS |
| AAATGCCTCAAGGCAGCGTT+TGG | 0.407622 | 1.2:-69704141 | MS.gene60630:CDS |
| GTAGTGGAATTGATGAATAA+AGG | 0.409455 | 1.2:-69704001 | MS.gene60630:CDS |
| AGTACCATTCATTCCTATAT+AGG | 0.420459 | 1.2:+69706825 | None:intergenic |
| TAAACATCTAGACCTTTGTT+TGG | 0.421249 | 1.2:-69706728 | MS.gene60630:CDS |
| CGTAAACACTCTCCTACAAT+AGG | 0.425392 | 1.2:+69706694 | None:intergenic |
| ACTTCCTCGCCTTCATGCAT+TGG | 0.432506 | 1.2:+69705243 | None:intergenic |
| GGAGTTGGATGATGATGATA+TGG | 0.432653 | 1.2:-69705507 | MS.gene60630:CDS |
| TGATGATGATATGGCTGAAA+AGG | 0.433309 | 1.2:-69705498 | MS.gene60630:CDS |
| TTTATTCTGCACACATGAAA+AGG | 0.433361 | 1.2:-69705429 | MS.gene60630:CDS |
| CTTAATTGGACCACTGGTTA+GGG | 0.433873 | 1.2:+69706203 | None:intergenic |
| TAGGATTTAGAGTAGGCGTT+AGG | 0.437463 | 1.2:-69706762 | MS.gene60630:CDS |
| AATGAATGGTACTTTATTGA+AGG | 0.438781 | 1.2:-69706815 | MS.gene60630:CDS |
| ATCTACCAACTTATTGGTAC+GGG | 0.443644 | 1.2:+69706924 | None:intergenic |
| GGTATATGTTCTTAAGTACT+TGG | 0.444660 | 1.2:-69703799 | MS.gene60630:CDS |
| TATGTTGGAATCTTCTTTGG+AGG | 0.445095 | 1.2:-69703960 | MS.gene60630:CDS |
| TTCAATACCTGCAATACGGC+TGG | 0.445664 | 1.2:+69706331 | None:intergenic |
| TCTTCATATCCACAAGATAT+CGG | 0.446334 | 1.2:+69706848 | None:intergenic |
| AGCAAATAAGGTTGACGGTA+GGG | 0.449525 | 1.2:-69705795 | MS.gene60630:CDS |
| TTGGAAGAAGAAAATGATGA+TGG | 0.450909 | 1.2:-69705599 | MS.gene60630:CDS |
| TTCTTTGGAGGTTGTAGTGG+TGG | 0.452564 | 1.2:-69703948 | MS.gene60630:CDS |
| TGAATTTCCGCTCAGTCCAT+TGG | 0.455335 | 1.2:+69704887 | None:intergenic |
| TTCTTAAGTACTTGGAGTTG+TGG | 0.459941 | 1.2:-69703791 | MS.gene60630:CDS |
| AAGATTGATGCGGATAATGA+TGG | 0.460099 | 1.2:-69705704 | MS.gene60630:CDS |
| TAGATGAGTTGCGTGTTGCC+GGG | 0.464352 | 1.2:-69705274 | MS.gene60630:CDS |
| TTAATGTGATTAGTTGGTTG+AGG | 0.466558 | 1.2:-69706017 | MS.gene60630:intron |
| TTTGCGCATCAGACAATGTT+CGG | 0.467767 | 1.2:+69706896 | None:intergenic |
| AGGTGGGATGCAAGTAGCTT+AGG | 0.478297 | 1.2:-69706781 | MS.gene60630:CDS |
| TCTTAAGTACTTGGAGTTGT+GGG | 0.482984 | 1.2:-69703790 | MS.gene60630:CDS |
| CATGTTACGTGTTGGACCAT+AGG | 0.488808 | 1.2:-69704205 | MS.gene60630:CDS |
| AATATTCAATACCTGCAATA+CGG | 0.491166 | 1.2:+69706327 | None:intergenic |
| AGAAAATGATGGGATGAAGT+TGG | 0.497063 | 1.2:-69705654 | MS.gene60630:CDS |
| TGAAGGAATTATTGCATAGG+TGG | 0.500937 | 1.2:-69706798 | MS.gene60630:CDS |
| ACCAACTTGAGAATGGTTAA+CGG | 0.500987 | 1.2:+69705946 | None:intergenic |
| AACATGACCTCCATCCACTT+TGG | 0.501951 | 1.2:+69706155 | None:intergenic |
| AAGCTGAAGGTCCTTCAAGA+AGG | 0.502318 | 1.2:-69706592 | MS.gene60630:CDS |
| ATCCTCAAGGATTGAAACCC+GGG | 0.502408 | 1.2:+69705835 | None:intergenic |
| TAAAGACAATGGGATGGAGT+TGG | 0.505100 | 1.2:-69705522 | MS.gene60630:CDS |
| CTCCAATACCAACTTGAGAA+TGG | 0.505693 | 1.2:+69705939 | None:intergenic |
| CATACATTGTCCTCTTCCTA+TGG | 0.507544 | 1.2:+69704189 | None:intergenic |
| ATGGAAGAAGATAAAGACAA+TGG | 0.509362 | 1.2:-69705533 | MS.gene60630:CDS |
| TAATGATGGGTTGAAAAGTC+AGG | 0.509693 | 1.2:-69705690 | MS.gene60630:CDS |
| TATTGTAGGAGAGTGTTTAC+GGG | 0.513019 | 1.2:-69706692 | MS.gene60630:CDS |
| AAGACCTATATAGGAATGAA+TGG | 0.515117 | 1.2:-69706829 | MS.gene60630:CDS |
| ATCTTCTTTGGAGGTTGTAG+TGG | 0.519883 | 1.2:-69703951 | MS.gene60630:CDS |
| TGGAAGAAGATAAAGACAAT+GGG | 0.520727 | 1.2:-69705532 | MS.gene60630:CDS |
| GCCGTTAACCATTCTCAAGT+TGG | 0.520859 | 1.2:-69705947 | MS.gene60630:CDS |
| GAAGAGGACAATGTATGTGC+TGG | 0.521423 | 1.2:-69704183 | MS.gene60630:CDS |
| TATCTACCAACTTATTGGTA+CGG | 0.522146 | 1.2:+69706923 | None:intergenic |
| AGGTTATTAATATTGCTGGC+AGG | 0.523648 | 1.2:-69705115 | MS.gene60630:CDS |
| TTAAAAGCAAATAAGGTTGA+CGG | 0.525394 | 1.2:-69705800 | MS.gene60630:CDS |
| GGAAAAGCAGAAGAAAATGA+TGG | 0.528960 | 1.2:-69705665 | MS.gene60630:CDS |
| TGTCTAGAATGTTGATGAGT+GGG | 0.529221 | 1.2:-69704736 | MS.gene60630:intron |
| CCGCAACGCCTCAAGTGTCT+TGG | 0.532629 | 1.2:+69704843 | None:intergenic |
| AATGCATGAAGGCGAGGAAG+TGG | 0.532769 | 1.2:-69705241 | MS.gene60630:CDS |
| AAAACGCTTAATTGGACCAC+TGG | 0.534869 | 1.2:+69706197 | None:intergenic |
| AGCTGAAGGTCCTTCAAGAA+GGG | 0.538805 | 1.2:-69706591 | MS.gene60630:CDS |
| AACTCCGTTCCGATATCTTG+TGG | 0.543524 | 1.2:-69706857 | MS.gene60630:CDS |
| TTTACGGGAAACTAGTGATA+GGG | 0.547278 | 1.2:-69706677 | MS.gene60630:CDS |
| GAACAATAAAGGAGATATGT+TGG | 0.549679 | 1.2:-69703975 | MS.gene60630:CDS |
| CAATCCTTGAGGATGATATG+AGG | 0.550170 | 1.2:-69705826 | MS.gene60630:CDS |
| CTTATATGGCTGAACATCAA+AGG | 0.550916 | 1.2:-69705886 | MS.gene60630:CDS |
| TGTCCAGTGGTCTTCGAACT+GGG | 0.551007 | 1.2:+69704226 | None:intergenic |
| GGCATTTGAGTCTTTATCTG+TGG | 0.552622 | 1.2:+69706946 | None:intergenic |
| AGTAGCATGGAAGTAGGAAG+TGG | 0.553313 | 1.2:-69705755 | MS.gene60630:CDS |
| ACACAAAGATTTGCTTTCCC+GGG | 0.559036 | 1.2:-69705852 | MS.gene60630:CDS |
| GAAGGAATTATTGCATAGGT+GGG | 0.560436 | 1.2:-69706797 | MS.gene60630:CDS |
| TATTCCGATGCCAAGTAGCA+TGG | 0.561626 | 1.2:-69705768 | MS.gene60630:CDS |
| TTCCCGGGTTTCAATCCTTG+AGG | 0.561883 | 1.2:-69705837 | MS.gene60630:CDS |
| CATCCTCAAGGATTGAAACC+CGG | 0.563868 | 1.2:+69705834 | None:intergenic |
| TCAAGATGTATATGCCTCGT+TGG | 0.564996 | 1.2:-69704867 | MS.gene60630:CDS |
| AAGCAAATAAGGTTGACGGT+AGG | 0.567979 | 1.2:-69705796 | MS.gene60630:CDS |
| TGGGATGGTGAAGCAAAATG+GGG | 0.568042 | 1.2:-69703771 | MS.gene60630:CDS |
| AGAAAATGATGATGGGATGA+AGG | 0.570797 | 1.2:-69705591 | MS.gene60630:CDS |
| ATTCCACTACCCCTTCAAAA+CGG | 0.572945 | 1.2:+69704014 | None:intergenic |
| AATGCCCCGTACCAATAAGT+TGG | 0.573173 | 1.2:-69706929 | MS.gene60630:CDS |
| CAACCCAGTTCGAAGACCAC+TGG | 0.574509 | 1.2:-69704229 | MS.gene60630:CDS |
| CATGATGAAGTTCGAAAACA+TGG | 0.575114 | 1.2:-69705083 | MS.gene60630:CDS |
| ATATCCTCATATCATCCTCA+AGG | 0.575345 | 1.2:+69705822 | None:intergenic |
| TATGGCTGAACATCAAAGGT+TGG | 0.580692 | 1.2:-69705882 | MS.gene60630:CDS |
| AGATGAGTTGCGTGTTGCCG+GGG | 0.584197 | 1.2:-69705273 | MS.gene60630:CDS |
| TTGGTCCAATTGTTAATGCG+TGG | 0.585880 | 1.2:+69706174 | None:intergenic |
| ACTTCCATGCTACTTGGCAT+CGG | 0.586687 | 1.2:+69705764 | None:intergenic |
| AGAAGATAAAGACAATGGGA+TGG | 0.587623 | 1.2:-69705528 | MS.gene60630:CDS |
| TATTGAAGGAATTATTGCAT+AGG | 0.587809 | 1.2:-69706801 | MS.gene60630:CDS |
| CTGAAGGACGTAAACTCCAA+TGG | 0.587862 | 1.2:-69704903 | MS.gene60630:CDS |
| AATTGAAAATCTTAGTAGTG+CGG | 0.588744 | 1.2:-69706407 | MS.gene60630:CDS |
| GAAGGTTGATGATGAAGATG+TGG | 0.591676 | 1.2:-69705573 | MS.gene60630:CDS |
| TAGTGTACATTCTAAGCTGA+AGG | 0.592478 | 1.2:-69706605 | MS.gene60630:CDS |
| AACAATTGGACCAAAGTGGA+TGG | 0.592872 | 1.2:-69706165 | MS.gene60630:CDS |
| GAAAAGCAGAAGAAAATGAT+GGG | 0.594943 | 1.2:-69705664 | MS.gene60630:CDS |
| CAGTGGTCTTCGAACTGGGT+TGG | 0.595890 | 1.2:+69704230 | None:intergenic |
| ATGCATGAAGGCGAGGAAGT+GGG | 0.596800 | 1.2:-69705240 | MS.gene60630:CDS |
| GATTTAAAGGCACATCCTGA+AGG | 0.597377 | 1.2:-69704919 | MS.gene60630:CDS |
| AGTAGCTTAGGATTTAGAGT+AGG | 0.598830 | 1.2:-69706769 | MS.gene60630:CDS |
| CATTAACAATTGGACCAAAG+TGG | 0.599981 | 1.2:-69706169 | MS.gene60630:CDS |
| TCAATACCTGCAATACGGCT+GGG | 0.600754 | 1.2:+69706332 | None:intergenic |
| TGATGAAGATGTTGGTGAAG+AGG | 0.600999 | 1.2:-69705630 | MS.gene60630:CDS |
| CCACTGGACATGTTACGTGT+TGG | 0.601741 | 1.2:-69704213 | MS.gene60630:CDS |
| ACGTGTTGGACCATAGGAAG+AGG | 0.602868 | 1.2:-69704199 | MS.gene60630:CDS |
| TAGAGTAGGCGTTAGGACTG+TGG | 0.605350 | 1.2:-69706755 | MS.gene60630:CDS |
| ATGCCAAGTAGCATGGAAGT+AGG | 0.607349 | 1.2:-69705761 | MS.gene60630:CDS |
| TTGTCTAGAATGTTGATGAG+TGG | 0.608942 | 1.2:-69704737 | MS.gene60630:intron |
| GGAAGTGGGTCAAAACATGT+AGG | 0.610645 | 1.2:-69705740 | MS.gene60630:CDS |
| TGGAAGAAGAAAATGATGAT+GGG | 0.616216 | 1.2:-69705598 | MS.gene60630:CDS |
| CCAAGACACTTGAGGCGTTG+CGG | 0.618422 | 1.2:-69704843 | MS.gene60630:CDS |
| GGTTCCAACACAACAAGACA+TGG | 0.619501 | 1.2:-69705990 | MS.gene60630:CDS |
| GCAGCGTTTGGATAATGCAA+TGG | 0.628794 | 1.2:-69704129 | MS.gene60630:intron |
| GTCATTTGATTAGATATGGG+CGG | 0.632926 | 1.2:-69706238 | MS.gene60630:intron |
| GAACATTGTCTGATGCGCAA+AGG | 0.635072 | 1.2:-69706894 | MS.gene60630:CDS |
| GCTGAAGGTCCTTCAAGAAG+GGG | 0.635073 | 1.2:-69706590 | MS.gene60630:CDS |
| AAGTACTTGGAGTTGTGGGA+TGG | 0.635913 | 1.2:-69703786 | MS.gene60630:CDS |
| GATGGGTTGAAAAGTCAGGC+GGG | 0.636683 | 1.2:-69705686 | MS.gene60630:CDS |
| AAGGTTGATGATGAAGATGT+GGG | 0.641554 | 1.2:-69705572 | MS.gene60630:CDS |
| AAGTTGGATGATGAAGATGT+TGG | 0.645218 | 1.2:-69705638 | MS.gene60630:CDS |
| ATTATCCAAACGCTGCCTTG+AGG | 0.647660 | 1.2:+69704136 | None:intergenic |
| CGGAAAATATAACACACACA+AGG | 0.655010 | 1.2:+69706528 | None:intergenic |
| ACAGTGAAAGAAATGCCTCA+AGG | 0.655287 | 1.2:-69704151 | MS.gene60630:CDS |
| AGATTGATGCGGATAATGAT+GGG | 0.662184 | 1.2:-69705703 | MS.gene60630:CDS |
| GGGATGGTGAAGCAAAATGG+GGG | 0.665253 | 1.2:-69703770 | MS.gene60630:CDS |
| AATTGGACCAAAGTGGATGG+AGG | 0.668982 | 1.2:-69706162 | MS.gene60630:CDS |
| GCAAACCTAAAGCCAAACAA+AGG | 0.673782 | 1.2:+69706716 | None:intergenic |
| GTAGCATGGAAGTAGGAAGT+GGG | 0.674257 | 1.2:-69705754 | MS.gene60630:CDS |
| TGATGGGTTGAAAAGTCAGG+CGG | 0.676742 | 1.2:-69705687 | MS.gene60630:CDS |
| TCGTTGGACCAAGACACTTG+AGG | 0.677045 | 1.2:-69704851 | MS.gene60630:CDS |
| GAACATTTATCCCTAACCAG+TGG | 0.678694 | 1.2:-69706213 | MS.gene60630:CDS |
| GCTCTTAGTACCTATAATTG+GGG | 0.679670 | 1.2:-69706451 | MS.gene60630:CDS |
| ATATCCACAAGATATCGGAA+CGG | 0.702922 | 1.2:+69706853 | None:intergenic |
| CCAACACGTAACATGTCCAG+TGG | 0.705795 | 1.2:+69704213 | None:intergenic |
| GTAAACTCCAATGGACTGAG+CGG | 0.711805 | 1.2:-69704894 | MS.gene60630:CDS |
| TCAAGTGTCTTGGTCCAACG+AGG | 0.711931 | 1.2:+69704853 | None:intergenic |
| TCTACCAACTTATTGGTACG+GGG | 0.719408 | 1.2:+69706925 | None:intergenic |
| AAAGTGTAGTAAGATTGATG+CGG | 0.726301 | 1.2:-69705714 | MS.gene60630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAAATTAAAACAAAAA+AGG | + | chr1.2:69705654-69705673 | None:intergenic | 10.0% |
| !! | ACATAAATAAAAGTAAGTAA+TGG | + | chr1.2:69705696-69705715 | None:intergenic | 15.0% |
| !! | ATTAAAACAAAAAAGGTTAA+CGG | + | chr1.2:69705647-69705666 | None:intergenic | 15.0% |
| !!! | AACTCTTAAATAAATTGTTT+TGG | - | chr1.2:69706740-69706759 | MS.gene60630:CDS | 15.0% |
| !!! | AATTTTGTCAGATTATTTTT+CGG | - | chr1.2:69705794-69705813 | MS.gene60630:CDS | 15.0% |
| !! | ATTATAATTAATGTTAGGCA+TGG | + | chr1.2:69705880-69705899 | None:intergenic | 20.0% |
| !! | CTGCAATTATAATTAATGTT+AGG | + | chr1.2:69705885-69705904 | None:intergenic | 20.0% |
| !! | TCATTGACATCAAATTTATT+AGG | + | chr1.2:69706508-69706527 | None:intergenic | 20.0% |
| !! | TGATATATTACTTGTGTATA+GGG | - | chr1.2:69706969-69706988 | MS.gene60630:intron | 20.0% |
| !! | TTAATATAACTGTGTGATTT+CGG | + | chr1.2:69704334-69704353 | None:intergenic | 20.0% |
| !! | TTAATTATAATTGCAGTTTG+AGG | - | chr1.2:69705889-69705908 | MS.gene60630:CDS | 20.0% |
| !! | TTATAATTAATGTTAGGCAT+GGG | + | chr1.2:69705879-69705898 | None:intergenic | 20.0% |
| !! | TTGATATATTACTTGTGTAT+AGG | - | chr1.2:69706968-69706987 | MS.gene60630:intron | 20.0% |
| !!! | ATGTAATTGTTTGTGTTTTA+TGG | - | chr1.2:69703839-69703858 | MS.gene60630:intron | 20.0% |
| !!! | ATTTGTCATTTGATTAGATA+TGG | - | chr1.2:69704597-69704616 | MS.gene60630:intron | 20.0% |
| !!! | TTTGTCATTTGATTAGATAT+GGG | - | chr1.2:69704598-69704617 | MS.gene60630:intron | 20.0% |
| !!! | TTTTATTTATGTATTGCCTT+AGG | - | chr1.2:69705704-69705723 | MS.gene60630:CDS | 20.0% |
| ! | AAAACAAAACTCGCAAAATT+AGG | + | chr1.2:69706467-69706486 | None:intergenic | 25.0% |
| ! | AAACAAAACTCGCAAAATTA+GGG | + | chr1.2:69706466-69706485 | None:intergenic | 25.0% |
| ! | AATATTCAATACCTGCAATA+CGG | + | chr1.2:69704515-69704534 | None:intergenic | 25.0% |
| ! | AATGAATGGTACTTTATTGA+AGG | - | chr1.2:69704024-69704043 | MS.gene60630:intron | 25.0% |
| ! | AATTGAAAATCTTAGTAGTG+CGG | - | chr1.2:69704432-69704451 | MS.gene60630:intron | 25.0% |
| ! | ACCAACTAATCACATTAAAT+AGG | + | chr1.2:69704820-69704839 | None:intergenic | 25.0% |
| ! | ACCTATTTAATGTGATTAGT+TGG | - | chr1.2:69704816-69704835 | MS.gene60630:intron | 25.0% |
| ! | AGTATATTAACTCGGTAAAT+GGG | - | chr1.2:69704753-69704772 | MS.gene60630:intron | 25.0% |
| ! | ATACTCTAATGAAAGAAAAC+AGG | + | chr1.2:69706177-69706196 | None:intergenic | 25.0% |
| ! | ATATTTGAATTGACAGAACA+AGG | - | chr1.2:69706221-69706240 | MS.gene60630:CDS | 25.0% |
| ! | ATTTACCAAAGCAACAAAAT+TGG | - | chr1.2:69706914-69706933 | MS.gene60630:CDS | 25.0% |
| ! | GAGGATATTAAAAGCAAATA+AGG | - | chr1.2:69705032-69705051 | MS.gene60630:intron | 25.0% |
| ! | GTAAATATCTACCAACTTAT+TGG | + | chr1.2:69703924-69703943 | None:intergenic | 25.0% |
| ! | TAGTATATTAACTCGGTAAA+TGG | - | chr1.2:69704752-69704771 | MS.gene60630:intron | 25.0% |
| ! | TATTGAAGGAATTATTGCAT+AGG | - | chr1.2:69704038-69704057 | MS.gene60630:intron | 25.0% |
| ! | TCAAATATAGAGAATAATGC+TGG | - | chr1.2:69706296-69706315 | MS.gene60630:intron | 25.0% |
| ! | TTAAAAGCAAATAAGGTTGA+CGG | - | chr1.2:69705039-69705058 | MS.gene60630:intron | 25.0% |
| ! | TTACCGAGTTAATATACTAA+AGG | + | chr1.2:69704751-69704770 | None:intergenic | 25.0% |
| ! | TTGCCTTTAGTATATTAACT+CGG | - | chr1.2:69704745-69704764 | MS.gene60630:intron | 25.0% |
| !!! | GCAGGTATTGAATATTAAAT+GGG | - | chr1.2:69704519-69704538 | MS.gene60630:intron | 25.0% |
| !!! | TGCAGGTATTGAATATTAAA+TGG | - | chr1.2:69704518-69704537 | MS.gene60630:intron | 25.0% |
| !!! | TTTTTTTAGTGTGTTATGTG+AGG | - | chr1.2:69705542-69705561 | MS.gene60630:CDS | 25.0% |
| AAAGTGTAGTAAGATTGATG+CGG | - | chr1.2:69705125-69705144 | MS.gene60630:intron | 30.0% | |
| AACAAAACTCGCAAAATTAG+GGG | + | chr1.2:69706465-69706484 | None:intergenic | 30.0% | |
| AAGACCTATATAGGAATGAA+TGG | - | chr1.2:69704010-69704029 | MS.gene60630:CDS | 30.0% | |
| AAGCTTGCACATCAAAAAAA+GGG | + | chr1.2:69704936-69704955 | None:intergenic | 30.0% | |
| AATAAAGGAGCGAACAATAA+AGG | - | chr1.2:69706853-69706872 | MS.gene60630:CDS | 30.0% | |
| ACAAAGGTCTAGATGTTTAA+AGG | + | chr1.2:69704110-69704129 | None:intergenic | 30.0% | |
| AGATATGTTGGAATCTTCTT+TGG | - | chr1.2:69706876-69706895 | MS.gene60630:CDS | 30.0% | |
| AGTACCATTCATTCCTATAT+AGG | + | chr1.2:69704017-69704036 | None:intergenic | 30.0% | |
| AGTCATCATTATGATGTTGT+AGG | - | chr1.2:69706053-69706072 | MS.gene60630:intron | 30.0% | |
| ATGGAAGAAGATAAAGACAA+TGG | - | chr1.2:69705306-69705325 | MS.gene60630:intron | 30.0% | |
| CCAGCAATATTAATAACCTA+AGG | + | chr1.2:69705723-69705742 | None:intergenic | 30.0% | |
| CCTTAGGTTATTAATATTGC+TGG | - | chr1.2:69705720-69705739 | MS.gene60630:CDS | 30.0% | |
| GAAAAGCAGAAGAAAATGAT+GGG | - | chr1.2:69705175-69705194 | MS.gene60630:intron | 30.0% | |
| GAACAATAAAGGAGATATGT+TGG | - | chr1.2:69706864-69706883 | MS.gene60630:CDS | 30.0% | |
| GATACAGTTATACACATTTC+TGG | - | chr1.2:69704481-69704500 | MS.gene60630:intron | 30.0% | |
| GGGTGAAGAAGAAAAAAAAA+TGG | - | chr1.2:69705287-69705306 | MS.gene60630:CDS | 30.0% | |
| GGTATATGTTCTTAAGTACT+TGG | - | chr1.2:69707040-69707059 | MS.gene60630:intron | 30.0% | |
| TAAACATCTAGACCTTTGTT+TGG | - | chr1.2:69704111-69704130 | MS.gene60630:intron | 30.0% | |
| TAAAGGTTGAATACACATCA+CGG | + | chr1.2:69705852-69705871 | None:intergenic | 30.0% | |
| TAACCTTCGCATTTGAAAAA+AGG | + | chr1.2:69704721-69704740 | None:intergenic | 30.0% | |
| TAAGCTTGCACATCAAAAAA+AGG | + | chr1.2:69704937-69704956 | None:intergenic | 30.0% | |
| TATCTACCAACTTATTGGTA+CGG | + | chr1.2:69703919-69703938 | None:intergenic | 30.0% | |
| TCTTCATATCCACAAGATAT+CGG | + | chr1.2:69703994-69704013 | None:intergenic | 30.0% | |
| TGGAAGAAGAAAATGATGAT+GGG | - | chr1.2:69705241-69705260 | MS.gene60630:CDS | 30.0% | |
| TGGAAGAAGATAAAGACAAT+GGG | - | chr1.2:69705307-69705326 | MS.gene60630:intron | 30.0% | |
| TGGCTGAAAAGGAAAAAAAA+AGG | - | chr1.2:69705352-69705371 | MS.gene60630:intron | 30.0% | |
| TGGTGAAGAGGAAAAAAAAT+TGG | - | chr1.2:69705221-69705240 | MS.gene60630:intron | 30.0% | |
| TTGGAAGAAGAAAATGATGA+TGG | - | chr1.2:69705240-69705259 | MS.gene60630:CDS | 30.0% | |
| TTTATTCTGCACACATGAAA+AGG | - | chr1.2:69705410-69705429 | MS.gene60630:intron | 30.0% | |
| ! | AAATTTTGCAGTCATGATTG+TGG | - | chr1.2:69707017-69707036 | MS.gene60630:intron | 30.0% |
| ! | AATTTTGCAGTCATGATTGT+GGG | - | chr1.2:69707018-69707037 | MS.gene60630:intron | 30.0% |
| ! | CTGTATCATTCTTTTGTTGA+TGG | + | chr1.2:69704468-69704487 | None:intergenic | 30.0% |
| ! | GTAGTGGAATTGATGAATAA+AGG | - | chr1.2:69706838-69706857 | MS.gene60630:CDS | 30.0% |
| ! | TTAATGTGATTAGTTGGTTG+AGG | - | chr1.2:69704822-69704841 | MS.gene60630:intron | 30.0% |
| ! | TTTTGATGTGCAAGCTTATA+TGG | - | chr1.2:69704939-69704958 | MS.gene60630:intron | 30.0% |
| !! | ACTAACCAATTTTGTTGCTT+TGG | + | chr1.2:69706922-69706941 | None:intergenic | 30.0% |
| !! | TGAGGTAGTTGATGATTTAA+AGG | - | chr1.2:69705907-69705926 | MS.gene60630:CDS | 30.0% |
| !! | TGTCAGATTATTTTTCGGTA+CGG | - | chr1.2:69705799-69705818 | MS.gene60630:CDS | 30.0% |
| !!! | AAACCTTTTTTCAAATGCGA+AGG | - | chr1.2:69704715-69704734 | MS.gene60630:intron | 30.0% |
| !!! | AACTACATTTTTTCATGTCG+CGG | - | chr1.2:69705473-69705492 | MS.gene60630:CDS | 30.0% |
| !!! | AGGAGTTTGCTGATTTATTT+TGG | - | chr1.2:69706241-69706260 | MS.gene60630:intron | 30.0% |
| !!! | CATTGTGGTTTTGTCTATAT+GGG | - | chr1.2:69706355-69706374 | MS.gene60630:CDS | 30.0% |
| AAGATTGATGCGGATAATGA+TGG | - | chr1.2:69705135-69705154 | MS.gene60630:intron | 35.0% | |
| AAGTTGGATGATGAAGATGT+TGG | - | chr1.2:69705201-69705220 | MS.gene60630:intron | 35.0% | |
| ACCAACTTGAGAATGGTTAA+CGG | + | chr1.2:69704896-69704915 | None:intergenic | 35.0% | |
| ACGCTCTTAGTACCTATAAT+TGG | - | chr1.2:69704386-69704405 | MS.gene60630:intron | 35.0% | |
| AGAAGATAAAGACAATGGGA+TGG | - | chr1.2:69705311-69705330 | MS.gene60630:intron | 35.0% | |
| AGATTGATGCGGATAATGAT+GGG | - | chr1.2:69705136-69705155 | MS.gene60630:intron | 35.0% | |
| AGGTGTAGATGATTTCTGAT+TGG | - | chr1.2:69706073-69706092 | MS.gene60630:intron | 35.0% | |
| AGGTTATTAATATTGCTGGC+AGG | - | chr1.2:69705724-69705743 | MS.gene60630:CDS | 35.0% | |
| ATATCCACAAGATATCGGAA+CGG | + | chr1.2:69703989-69704008 | None:intergenic | 35.0% | |
| ATATCCTCATATCATCCTCA+AGG | + | chr1.2:69705020-69705039 | None:intergenic | 35.0% | |
| ATCTACCAACTTATTGGTAC+GGG | + | chr1.2:69703918-69703937 | None:intergenic | 35.0% | |
| CATGATGAAGTTCGAAAACA+TGG | - | chr1.2:69705756-69705775 | MS.gene60630:CDS | 35.0% | |
| CATTAACAATTGGACCAAAG+TGG | - | chr1.2:69704670-69704689 | MS.gene60630:intron | 35.0% | |
| CGCTCTTAGTACCTATAATT+GGG | - | chr1.2:69704387-69704406 | MS.gene60630:intron | 35.0% | |
| CGGAAAATATAACACACACA+AGG | + | chr1.2:69704314-69704333 | None:intergenic | 35.0% | |
| CTCTACCTAAAATTCCCTTT+AGG | - | chr1.2:69706320-69706339 | MS.gene60630:intron | 35.0% | |
| CTTATATGGCTGAACATCAA+AGG | - | chr1.2:69704953-69704972 | MS.gene60630:intron | 35.0% | |
| GAAGGAATTATTGCATAGGT+GGG | - | chr1.2:69704042-69704061 | MS.gene60630:intron | 35.0% | |
| GAGGGAAAACAAACGAAAAA+GGG | - | chr1.2:69703766-69703785 | MS.gene60630:CDS | 35.0% | |
| GCAAAATTAGGGGTTACAAT+AGG | + | chr1.2:69706455-69706474 | None:intergenic | 35.0% | |
| GCTCTTAGTACCTATAATTG+GGG | - | chr1.2:69704388-69704407 | MS.gene60630:intron | 35.0% | |
| GGAAAAGCAGAAGAAAATGA+TGG | - | chr1.2:69705174-69705193 | MS.gene60630:intron | 35.0% | |
| GGGTTTGTGTTGTATTAGTT+CGG | - | chr1.2:69706375-69706394 | MS.gene60630:CDS | 35.0% | |
| GTCATTTGATTAGATATGGG+CGG | - | chr1.2:69704601-69704620 | MS.gene60630:intron | 35.0% | |
| GTGGATATGAAGACCTATAT+AGG | - | chr1.2:69704001-69704020 | MS.gene60630:CDS | 35.0% | |
| TAGTGTACATTCTAAGCTGA+AGG | - | chr1.2:69704234-69704253 | MS.gene60630:CDS | 35.0% | |
| TATGTTGGAATCTTCTTTGG+AGG | - | chr1.2:69706879-69706898 | MS.gene60630:CDS | 35.0% | |
| TCTTAAGTACTTGGAGTTGT+GGG | - | chr1.2:69707049-69707068 | MS.gene60630:intron | 35.0% | |
| TGAAGGAATTATTGCATAGG+TGG | - | chr1.2:69704041-69704060 | MS.gene60630:intron | 35.0% | |
| TGAGGGAAAACAAACGAAAA+AGG | - | chr1.2:69703765-69703784 | MS.gene60630:CDS | 35.0% | |
| TGTTAGGCATGGGATAATAA+AGG | + | chr1.2:69705869-69705888 | None:intergenic | 35.0% | |
| TTCTTAAGTACTTGGAGTTG+TGG | - | chr1.2:69707048-69707067 | MS.gene60630:intron | 35.0% | |
| TTGTGTTGTATTAGTTCGGT+GGG | - | chr1.2:69706379-69706398 | MS.gene60630:CDS | 35.0% | |
| TTTACGGGAAACTAGTGATA+GGG | - | chr1.2:69704162-69704181 | MS.gene60630:CDS | 35.0% | |
| TTTGTGTTGTATTAGTTCGG+TGG | - | chr1.2:69706378-69706397 | MS.gene60630:CDS | 35.0% | |
| ! | AACACAAAGATTTGCTTTCC+CGG | - | chr1.2:69704986-69705005 | MS.gene60630:intron | 35.0% |
| ! | AGAAAATGATGGGATGAAGT+TGG | - | chr1.2:69705185-69705204 | MS.gene60630:intron | 35.0% |
| ! | AGTAGCTTAGGATTTAGAGT+AGG | - | chr1.2:69704070-69704089 | MS.gene60630:intron | 35.0% |
| ! | ATTTTGCAGTCATGATTGTG+GGG | - | chr1.2:69707019-69707038 | MS.gene60630:intron | 35.0% |
| ! | GTTTTCCACGCATTAACAAT+TGG | - | chr1.2:69704660-69704679 | MS.gene60630:intron | 35.0% |
| ! | GTTTTGTGTGGTTTTTTGTG+CGG | - | chr1.2:69706408-69706427 | MS.gene60630:CDS | 35.0% |
| ! | TGATGATGATATGGCTGAAA+AGG | - | chr1.2:69705341-69705360 | MS.gene60630:intron | 35.0% |
| ! | TGTCTAGAATGTTGATGAGT+GGG | - | chr1.2:69706103-69706122 | MS.gene60630:intron | 35.0% |
| ! | TTACAGAAAGTCCGTTTTGA+AGG | - | chr1.2:69706814-69706833 | MS.gene60630:CDS | 35.0% |
| ! | TTGTCTAGAATGTTGATGAG+TGG | - | chr1.2:69706102-69706121 | MS.gene60630:intron | 35.0% |
| ! | TTTTGTGTGGTTTTTTGTGC+GGG | - | chr1.2:69706409-69706428 | MS.gene60630:CDS | 35.0% |
| !! | AACCATTCTCAAGTTGGTAT+TGG | - | chr1.2:69704898-69704917 | MS.gene60630:CDS | 35.0% |
| !! | AAGGTTGATGATGAAGATGT+GGG | - | chr1.2:69705267-69705286 | MS.gene60630:CDS | 35.0% |
| !! | AGAAAATGATGATGGGATGA+AGG | - | chr1.2:69705248-69705267 | MS.gene60630:CDS | 35.0% |
| !! | CTATTGTAGGAGAGTGTTTA+CGG | - | chr1.2:69704146-69704165 | MS.gene60630:CDS | 35.0% |
| !! | TAATGATGGGTTGAAAAGTC+AGG | - | chr1.2:69705149-69705168 | MS.gene60630:intron | 35.0% |
| !! | TACAGAAAGTCCGTTTTGAA+GGG | - | chr1.2:69706815-69706834 | MS.gene60630:CDS | 35.0% |
| !! | TATTGTAGGAGAGTGTTTAC+GGG | - | chr1.2:69704147-69704166 | MS.gene60630:CDS | 35.0% |
| !! | TTTTCCATGTCTTGTTGTGT+TGG | + | chr1.2:69704856-69704875 | None:intergenic | 35.0% |
| !!! | ACTACATTTTTTCATGTCGC+GGG | - | chr1.2:69705474-69705493 | MS.gene60630:CDS | 35.0% |
| !!! | GCATTGTGGTTTTGTCTATA+TGG | - | chr1.2:69706354-69706373 | MS.gene60630:CDS | 35.0% |
| AAAACGCTTAATTGGACCAC+TGG | + | chr1.2:69704645-69704664 | None:intergenic | 40.0% | |
| AACAATTGGACCAAAGTGGA+TGG | - | chr1.2:69704674-69704693 | MS.gene60630:intron | 40.0% | |
| AACAGCAACACCCCAATTAT+AGG | + | chr1.2:69704401-69704420 | None:intergenic | 40.0% | |
| AAGAAAACAGGCAGTGATGA+AGG | + | chr1.2:69706165-69706184 | None:intergenic | 40.0% | |
| AAGCAAATAAGGTTGACGGT+AGG | - | chr1.2:69705043-69705062 | MS.gene60630:intron | 40.0% | |
| ACAGTGAAAGAAATGCCTCA+AGG | - | chr1.2:69706688-69706707 | MS.gene60630:CDS | 40.0% | |
| AGCAAATAAGGTTGACGGTA+GGG | - | chr1.2:69705044-69705063 | MS.gene60630:intron | 40.0% | |
| ATGCGTGGAAAACGCTTAAT+TGG | + | chr1.2:69704653-69704672 | None:intergenic | 40.0% | |
| ATTCCACTACCCCTTCAAAA+CGG | + | chr1.2:69706828-69706847 | None:intergenic | 40.0% | |
| CAATCCTTGAGGATGATATG+AGG | - | chr1.2:69705013-69705032 | MS.gene60630:intron | 40.0% | |
| CATACATTGTCCTCTTCCTA+TGG | + | chr1.2:69706653-69706672 | None:intergenic | 40.0% | |
| CGAAAAAGGGAATGTGTTGT+TGG | - | chr1.2:69703779-69703798 | MS.gene60630:CDS | 40.0% | |
| CGTAAACACTCTCCTACAAT+AGG | + | chr1.2:69704148-69704167 | None:intergenic | 40.0% | |
| CTAAAATTCCCTTTAGGCAG+TGG | - | chr1.2:69706326-69706345 | MS.gene60630:intron | 40.0% | |
| CTCCAATACCAACTTGAGAA+TGG | + | chr1.2:69704903-69704922 | None:intergenic | 40.0% | |
| GAACATTTATCCCTAACCAG+TGG | - | chr1.2:69704626-69704645 | MS.gene60630:intron | 40.0% | |
| GCAAACCTAAAGCCAAACAA+AGG | + | chr1.2:69704126-69704145 | None:intergenic | 40.0% | |
| GGCATTTGAGTCTTTATCTG+TGG | + | chr1.2:69703896-69703915 | None:intergenic | 40.0% | |
| GTTTACGGGAAACTAGTGAT+AGG | - | chr1.2:69704161-69704180 | MS.gene60630:CDS | 40.0% | |
| TAAAGACAATGGGATGGAGT+TGG | - | chr1.2:69705317-69705336 | MS.gene60630:intron | 40.0% | |
| TATGGCTGAACATCAAAGGT+TGG | - | chr1.2:69704957-69704976 | MS.gene60630:intron | 40.0% | |
| TCAAGATGTATATGCCTCGT+TGG | - | chr1.2:69705972-69705991 | MS.gene60630:CDS | 40.0% | |
| TCTACCAACTTATTGGTACG+GGG | + | chr1.2:69703917-69703936 | None:intergenic | 40.0% | |
| TTGGTCCAATTGTTAATGCG+TGG | + | chr1.2:69704668-69704687 | None:intergenic | 40.0% | |
| TTTGCGCATCAGACAATGTT+CGG | + | chr1.2:69703946-69703965 | None:intergenic | 40.0% | |
| ! | ACACAAAGATTTGCTTTCCC+GGG | - | chr1.2:69704987-69705006 | MS.gene60630:intron | 40.0% |
| ! | ATCTTCTTTGGAGGTTGTAG+TGG | - | chr1.2:69706888-69706907 | MS.gene60630:CDS | 40.0% |
| ! | CACTGCCTAAAGGGAATTTT+AGG | + | chr1.2:69706328-69706347 | None:intergenic | 40.0% |
| ! | CTTAATTGGACCACTGGTTA+GGG | + | chr1.2:69704639-69704658 | None:intergenic | 40.0% |
| ! | GATTTAAAGGCACATCCTGA+AGG | - | chr1.2:69705920-69705939 | MS.gene60630:CDS | 40.0% |
| ! | GCTTTAGGTTTGCCTATTGT+AGG | - | chr1.2:69704133-69704152 | MS.gene60630:CDS | 40.0% |
| ! | GGAGTTGGATGATGATGATA+TGG | - | chr1.2:69705332-69705351 | MS.gene60630:intron | 40.0% |
| ! | GGAGTTTTTCCAATGCATGA+AGG | - | chr1.2:69705587-69705606 | MS.gene60630:CDS | 40.0% |
| ! | TAGGATTTAGAGTAGGCGTT+AGG | - | chr1.2:69704077-69704096 | MS.gene60630:intron | 40.0% |
| ! | TGATGAAGATGTTGGTGAAG+AGG | - | chr1.2:69705209-69705228 | MS.gene60630:intron | 40.0% |
| ! | TGATTAGTTGGTTGAGGACT+TGG | - | chr1.2:69704828-69704847 | MS.gene60630:intron | 40.0% |
| ! | TGTGTTGTATTAGTTCGGTG+GGG | - | chr1.2:69706380-69706399 | MS.gene60630:CDS | 40.0% |
| !! | CTAGACCTTTGTTTGGCTTT+AGG | - | chr1.2:69704118-69704137 | MS.gene60630:intron | 40.0% |
| !! | GAAGGTTGATGATGAAGATG+TGG | - | chr1.2:69705266-69705285 | MS.gene60630:CDS | 40.0% |
| !!! | ACAGAAAGTCCGTTTTGAAG+GGG | - | chr1.2:69706816-69706835 | MS.gene60630:CDS | 40.0% |
| !!! | TTTGTGTGGTTTTTTGTGCG+GGG | - | chr1.2:69706410-69706429 | MS.gene60630:CDS | 40.0% |
| AACATGACCTCCATCCACTT+TGG | + | chr1.2:69704687-69704706 | None:intergenic | 45.0% | |
| AACTCCGTTCCGATATCTTG+TGG | - | chr1.2:69703982-69704001 | MS.gene60630:CDS | 45.0% | |
| AAGCTGAAGGTCCTTCAAGA+AGG | - | chr1.2:69704247-69704266 | MS.gene60630:intron | 45.0% | |
| AAGTACTTGGAGTTGTGGGA+TGG | - | chr1.2:69707053-69707072 | MS.gene60630:intron | 45.0% | |
| AATGCCCCGTACCAATAAGT+TGG | - | chr1.2:69703910-69703929 | MS.gene60630:intron | 45.0% | |
| AATTGGACCAAAGTGGATGG+AGG | - | chr1.2:69704677-69704696 | MS.gene60630:intron | 45.0% | |
| AGCTGAAGGTCCTTCAAGAA+GGG | - | chr1.2:69704248-69704267 | MS.gene60630:intron | 45.0% | |
| AGTAGCATGGAAGTAGGAAG+TGG | - | chr1.2:69705084-69705103 | MS.gene60630:CDS | 45.0% | |
| ATCCTCAAGGATTGAAACCC+GGG | + | chr1.2:69705007-69705026 | None:intergenic | 45.0% | |
| ATGCCAAATCCACTGCCTAA+AGG | + | chr1.2:69706338-69706357 | None:intergenic | 45.0% | |
| ATGCCAAGTAGCATGGAAGT+AGG | - | chr1.2:69705078-69705097 | MS.gene60630:CDS | 45.0% | |
| ATTATCCAAACGCTGCCTTG+AGG | + | chr1.2:69706706-69706725 | None:intergenic | 45.0% | |
| CATCCTCAAGGATTGAAACC+CGG | + | chr1.2:69705008-69705027 | None:intergenic | 45.0% | |
| CATGCATTGGAAAAACTCCC+CGG | + | chr1.2:69705586-69705605 | None:intergenic | 45.0% | |
| CATGTTACGTGTTGGACCAT+AGG | - | chr1.2:69706634-69706653 | MS.gene60630:CDS | 45.0% | |
| CATTGGAGTTTACGTCCTTC+AGG | + | chr1.2:69705938-69705957 | None:intergenic | 45.0% | |
| CTGAAGGACGTAAACTCCAA+TGG | - | chr1.2:69705936-69705955 | MS.gene60630:CDS | 45.0% | |
| CTTCCTACTTCCATGCTACT+TGG | + | chr1.2:69705084-69705103 | None:intergenic | 45.0% | |
| GAACATTGTCTGATGCGCAA+AGG | - | chr1.2:69703945-69703964 | MS.gene60630:CDS | 45.0% | |
| GAAGAGGACAATGTATGTGC+TGG | - | chr1.2:69706656-69706675 | MS.gene60630:CDS | 45.0% | |
| GCAGCGTTTGGATAATGCAA+TGG | - | chr1.2:69706710-69706729 | MS.gene60630:CDS | 45.0% | |
| GCCGTTAACCATTCTCAAGT+TGG | - | chr1.2:69704892-69704911 | MS.gene60630:CDS | 45.0% | |
| GGAAGTGGGTCAAAACATGT+AGG | - | chr1.2:69705099-69705118 | MS.gene60630:CDS | 45.0% | |
| GGTTCCAACACAACAAGACA+TGG | - | chr1.2:69704849-69704868 | MS.gene60630:CDS | 45.0% | |
| GTAGCATGGAAGTAGGAAGT+GGG | - | chr1.2:69705085-69705104 | MS.gene60630:CDS | 45.0% | |
| GTGGGATGGTGAAGCAAAAT+GGG | - | chr1.2:69707067-69707086 | MS.gene60630:CDS | 45.0% | |
| TATTCCGATGCCAAGTAGCA+TGG | - | chr1.2:69705071-69705090 | MS.gene60630:CDS | 45.0% | |
| TCAATACCTGCAATACGGCT+GGG | + | chr1.2:69704510-69704529 | None:intergenic | 45.0% | |
| TGAATTTCCGCTCAGTCCAT+TGG | + | chr1.2:69705955-69705974 | None:intergenic | 45.0% | |
| TGCCAAATCCACTGCCTAAA+GGG | + | chr1.2:69706337-69706356 | None:intergenic | 45.0% | |
| TGGGATGGTGAAGCAAAATG+GGG | - | chr1.2:69707068-69707087 | MS.gene60630:CDS | 45.0% | |
| TGTGGGATGGTGAAGCAAAA+TGG | - | chr1.2:69707066-69707085 | MS.gene60630:CDS | 45.0% | |
| TTCAATACCTGCAATACGGC+TGG | + | chr1.2:69704511-69704530 | None:intergenic | 45.0% | |
| ! | ACTTCCATGCTACTTGGCAT+CGG | + | chr1.2:69705078-69705097 | None:intergenic | 45.0% |
| ! | GCTTAATTGGACCACTGGTT+AGG | + | chr1.2:69704640-69704659 | None:intergenic | 45.0% |
| ! | GTGTTGTATTAGTTCGGTGG+GGG | - | chr1.2:69706381-69706400 | MS.gene60630:CDS | 45.0% |
| ! | TGTTGTATTAGTTCGGTGGG+GGG | - | chr1.2:69706382-69706401 | MS.gene60630:CDS | 45.0% |
| ! | TTCCCTTTAGGCAGTGGATT+TGG | - | chr1.2:69706332-69706351 | MS.gene60630:intron | 45.0% |
| ! | TTCTTTGGAGGTTGTAGTGG+TGG | - | chr1.2:69706891-69706910 | MS.gene60630:CDS | 45.0% |
| ! | TTTTCCAATGCATGAAGGCG+AGG | - | chr1.2:69705592-69705611 | MS.gene60630:CDS | 45.0% |
| !! | GTAAACTCCAATGGACTGAG+CGG | - | chr1.2:69705945-69705964 | MS.gene60630:CDS | 45.0% |
| !! | TGATGGGTTGAAAAGTCAGG+CGG | - | chr1.2:69705152-69705171 | MS.gene60630:intron | 45.0% |
| !! | AAATTTAAAAATTTCAAAAT+AGG | + | chr1.2:69707003-69707022 | None:intergenic | 5.0% |
| !!! | TAAATTTTATCATTAAAATT+AGG | - | chr1.2:69706578-69706597 | MS.gene60630:CDS | 5.0% |
| AAATGCCTCAAGGCAGCGTT+TGG | - | chr1.2:69706698-69706717 | MS.gene60630:CDS | 50.0% | |
| AATGCATGAAGGCGAGGAAG+TGG | - | chr1.2:69705598-69705617 | MS.gene60630:CDS | 50.0% | |
| ACGTGTTGGACCATAGGAAG+AGG | - | chr1.2:69706640-69706659 | MS.gene60630:CDS | 50.0% | |
| ACTTCCTCGCCTTCATGCAT+TGG | + | chr1.2:69705599-69705618 | None:intergenic | 50.0% | |
| AGGTGGGATGCAAGTAGCTT+AGG | - | chr1.2:69704058-69704077 | MS.gene60630:intron | 50.0% | |
| ATGCATGAAGGCGAGGAAGT+GGG | - | chr1.2:69705599-69705618 | MS.gene60630:CDS | 50.0% | |
| ATGTCCAGTGGTCTTCGAAC+TGG | + | chr1.2:69706617-69706636 | None:intergenic | 50.0% | |
| CCAACACGTAACATGTCCAG+TGG | + | chr1.2:69706629-69706648 | None:intergenic | 50.0% | |
| CCACTGGACATGTTACGTGT+TGG | - | chr1.2:69706626-69706645 | MS.gene60630:CDS | 50.0% | |
| CTACGTTGTCCCCTTCTTGA+AGG | + | chr1.2:69704261-69704280 | None:intergenic | 50.0% | |
| GCGGGGTTTACGCTTATGTT+TGG | - | chr1.2:69706427-69706446 | MS.gene60630:CDS | 50.0% | |
| GCTGAAGGTCCTTCAAGAAG+GGG | - | chr1.2:69704249-69704268 | MS.gene60630:intron | 50.0% | |
| GGGATGGTGAAGCAAAATGG+GGG | - | chr1.2:69707069-69707088 | MS.gene60630:CDS | 50.0% | |
| GTAGATGAGTTGCGTGTTGC+CGG | - | chr1.2:69705564-69705583 | MS.gene60630:CDS | 50.0% | |
| TAGAGTAGGCGTTAGGACTG+TGG | - | chr1.2:69704084-69704103 | MS.gene60630:intron | 50.0% | |
| TAGATGAGTTGCGTGTTGCC+GGG | - | chr1.2:69705565-69705584 | MS.gene60630:CDS | 50.0% | |
| TATTAGGCAGAGTCGTCGCA+AGG | + | chr1.2:69706492-69706511 | None:intergenic | 50.0% | |
| TCAAGTGTCTTGGTCCAACG+AGG | + | chr1.2:69705989-69706008 | None:intergenic | 50.0% | |
| TCGTTGGACCAAGACACTTG+AGG | - | chr1.2:69705988-69706007 | MS.gene60630:CDS | 50.0% | |
| TGTCCAGTGGTCTTCGAACT+GGG | + | chr1.2:69706616-69706635 | None:intergenic | 50.0% | |
| TTCCCGGGTTTCAATCCTTG+AGG | - | chr1.2:69705002-69705021 | MS.gene60630:intron | 50.0% | |
| ! | AGGCAGTGGATTTGGCATTG+TGG | - | chr1.2:69706340-69706359 | MS.gene60630:CDS | 50.0% |
| !! | GATGGGTTGAAAAGTCAGGC+GGG | - | chr1.2:69705153-69705172 | MS.gene60630:intron | 50.0% |
| !!! | AGTCCGTTTTGAAGGGGTAG+TGG | - | chr1.2:69706822-69706841 | MS.gene60630:CDS | 50.0% |
| AGATGAGTTGCGTGTTGCCG+GGG | - | chr1.2:69705566-69705585 | MS.gene60630:CDS | 55.0% | |
| CAACCCAGTTCGAAGACCAC+TGG | - | chr1.2:69706610-69706629 | MS.gene60630:CDS | 55.0% | |
| CAGTGGTCTTCGAACTGGGT+TGG | + | chr1.2:69706612-69706631 | None:intergenic | 55.0% | |
| ! | GTATTAGTTCGGTGGGGGGT+TGG | - | chr1.2:69706386-69706405 | MS.gene60630:CDS | 55.0% |
| !! | CCAAGACACTTGAGGCGTTG+CGG | - | chr1.2:69705996-69706015 | MS.gene60630:CDS | 55.0% |
| CCGCAACGCCTCAAGTGTCT+TGG | + | chr1.2:69705999-69706018 | None:intergenic | 60.0% | |
| TGGTTGCCCAGCCGTATTGC+AGG | - | chr1.2:69704501-69704520 | MS.gene60630:intron | 60.0% | |
| !!! | GGTGGGGGGTTGGTTTTGTG+TGG | - | chr1.2:69706396-69706415 | MS.gene60630:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 69703764 | 69707097 | 69703764 | ID=MS.gene60630 |
| chr1.2 | mRNA | 69703764 | 69707097 | 69703764 | ID=MS.gene60630.t1;Parent=MS.gene60630 |
| chr1.2 | exon | 69707059 | 69707097 | 69707059 | ID=MS.gene60630.t1.exon1;Parent=MS.gene60630.t1 |
| chr1.2 | CDS | 69707059 | 69707097 | 69707059 | ID=cds.MS.gene60630.t1;Parent=MS.gene60630.t1 |
| chr1.2 | exon | 69706339 | 69706968 | 69706339 | ID=MS.gene60630.t1.exon2;Parent=MS.gene60630.t1 |
| chr1.2 | CDS | 69706339 | 69706968 | 69706339 | ID=cds.MS.gene60630.t1;Parent=MS.gene60630.t1 |
| chr1.2 | exon | 69706125 | 69706247 | 69706125 | ID=MS.gene60630.t1.exon3;Parent=MS.gene60630.t1 |
| chr1.2 | CDS | 69706125 | 69706247 | 69706125 | ID=cds.MS.gene60630.t1;Parent=MS.gene60630.t1 |
| chr1.2 | exon | 69705419 | 69706026 | 69705419 | ID=MS.gene60630.t1.exon4;Parent=MS.gene60630.t1 |
| chr1.2 | CDS | 69705419 | 69706026 | 69705419 | ID=cds.MS.gene60630.t1;Parent=MS.gene60630.t1 |
| chr1.2 | exon | 69705229 | 69705310 | 69705229 | ID=MS.gene60630.t1.exon5;Parent=MS.gene60630.t1 |
| chr1.2 | CDS | 69705229 | 69705310 | 69705229 | ID=cds.MS.gene60630.t1;Parent=MS.gene60630.t1 |
| chr1.2 | exon | 69705046 | 69705135 | 69705046 | ID=MS.gene60630.t1.exon6;Parent=MS.gene60630.t1 |
| chr1.2 | CDS | 69705046 | 69705135 | 69705046 | ID=cds.MS.gene60630.t1;Parent=MS.gene60630.t1 |
| chr1.2 | exon | 69704831 | 69704956 | 69704831 | ID=MS.gene60630.t1.exon7;Parent=MS.gene60630.t1 |
| chr1.2 | CDS | 69704831 | 69704956 | 69704831 | ID=cds.MS.gene60630.t1;Parent=MS.gene60630.t1 |
| chr1.2 | exon | 69704737 | 69704751 | 69704737 | ID=MS.gene60630.t1.exon8;Parent=MS.gene60630.t1 |
| chr1.2 | CDS | 69704737 | 69704751 | 69704737 | ID=cds.MS.gene60630.t1;Parent=MS.gene60630.t1 |
| chr1.2 | exon | 69704130 | 69704261 | 69704130 | ID=MS.gene60630.t1.exon9;Parent=MS.gene60630.t1 |
| chr1.2 | CDS | 69704130 | 69704261 | 69704130 | ID=cds.MS.gene60630.t1;Parent=MS.gene60630.t1 |
| chr1.2 | exon | 69703926 | 69704041 | 69703926 | ID=MS.gene60630.t1.exon10;Parent=MS.gene60630.t1 |
| chr1.2 | CDS | 69703926 | 69704041 | 69703926 | ID=cds.MS.gene60630.t1;Parent=MS.gene60630.t1 |
| chr1.2 | exon | 69703764 | 69703833 | 69703764 | ID=MS.gene60630.t1.exon11;Parent=MS.gene60630.t1 |
| chr1.2 | CDS | 69703764 | 69703833 | 69703764 | ID=cds.MS.gene60630.t1;Parent=MS.gene60630.t1 |
| Gene Sequence |
| Protein sequence |
