Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60659.t1 | XP_024630546.1 | 49.1 | 1039 | 16 | 2 | 15 | 540 | 1 | 1039 | 3.20E-232 | 814.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60659.t1 | P20825 | 37.8 | 172 | 101 | 2 | 308 | 473 | 451 | 622 | 3.0e-24 | 115.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60659.t1 | A0A2N9ERI2 | 31.6 | 1199 | 283 | 8 | 15 | 676 | 1 | 1199 | 2.0e-154 | 555.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052112 | MS.gene60659 | 0.951337 | 2.53E-109 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60659.t1 | MTR_4g102460 | 64.671 | 167 | 56 | 2 | 1 | 166 | 1 | 165 | 5.92e-56 | 199 |
| MS.gene60659.t1 | MTR_8g054490 | 94.286 | 105 | 6 | 0 | 1 | 105 | 1 | 105 | 2.13e-51 | 177 |
| MS.gene60659.t1 | MTR_7g105270 | 69.128 | 149 | 46 | 0 | 18 | 166 | 1 | 149 | 5.07e-50 | 182 |
| MS.gene60659.t1 | MTR_7g034745 | 94.681 | 94 | 5 | 0 | 1 | 94 | 1 | 94 | 4.37e-47 | 161 |
| MS.gene60659.t1 | MTR_7g056297 | 66.165 | 133 | 45 | 0 | 18 | 150 | 1 | 133 | 4.04e-42 | 158 |
| MS.gene60659.t1 | MTR_1g105095 | 60.185 | 108 | 43 | 0 | 27 | 134 | 76 | 183 | 7.21e-32 | 122 |
| MS.gene60659.t1 | MTR_6g045307 | 28.879 | 232 | 142 | 4 | 323 | 551 | 143 | 354 | 1.05e-21 | 100 |
| MS.gene60659.t1 | MTR_0045s0120 | 66.292 | 89 | 30 | 0 | 18 | 106 | 1 | 89 | 2.14e-21 | 90.1 |
| MS.gene60659.t1 | MTR_7g060240 | 57.282 | 103 | 42 | 2 | 1 | 102 | 1 | 102 | 1.72e-20 | 87.4 |
| MS.gene60659.t1 | MTR_1361s0010 | 70.690 | 58 | 17 | 0 | 93 | 150 | 1 | 58 | 5.75e-20 | 90.5 |
| MS.gene60659.t1 | MTR_1g052140 | 28.244 | 262 | 120 | 7 | 323 | 551 | 102 | 328 | 6.40e-20 | 94.7 |
| MS.gene60659.t1 | MTR_2g076860 | 23.958 | 192 | 103 | 1 | 42 | 233 | 72 | 220 | 2.14e-13 | 70.9 |
| MS.gene60659.t1 | MTR_0003s0410 | 42.045 | 88 | 51 | 0 | 323 | 410 | 676 | 763 | 2.06e-12 | 70.9 |
| MS.gene60659.t1 | MTR_8g468050 | 30.000 | 160 | 93 | 4 | 268 | 409 | 56 | 214 | 2.52e-12 | 67.0 |
| MS.gene60659.t1 | MTR_6g060120 | 56.579 | 76 | 31 | 2 | 1 | 75 | 1 | 75 | 1.86e-11 | 62.0 |
| MS.gene60659.t1 | MTR_1g050845 | 30.345 | 145 | 94 | 3 | 534 | 676 | 582 | 721 | 6.96e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 106 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTTCTGGTACAACATTT+TGG | 0.158082 | 1.2:+70261380 | None:intergenic |
| CTCTACGTGAAGCAATTATT+TGG | 0.162195 | 1.2:-70259878 | MS.gene60659:CDS |
| AGACAACAAATCTTTAAAAT+TGG | 0.231722 | 1.2:-70259033 | MS.gene60659:CDS |
| CATGCTATTGACTTTATTCC+TGG | 0.247862 | 1.2:-70261322 | MS.gene60659:CDS |
| AACTTGGCATTTGGTTGTTT+TGG | 0.251939 | 1.2:+70258973 | None:intergenic |
| AATCTTTAAAATTGGAGATT+TGG | 0.253491 | 1.2:-70259025 | MS.gene60659:CDS |
| TGAAGAAACATGCTTCAATT+TGG | 0.257143 | 1.2:-70262677 | MS.gene60659:CDS |
| AGTTGTGACGCTTCCAATTC+AGG | 0.261063 | 1.2:-70260398 | MS.gene60659:CDS |
| ATTCTATAAGCTGGTCTATT+AGG | 0.263004 | 1.2:+70261289 | None:intergenic |
| TACCCAAGAAGCATTCTTAT+AGG | 0.291800 | 1.2:-70262314 | MS.gene60659:CDS |
| CTTGGTGACAACTTGGCATT+TGG | 0.298252 | 1.2:+70258964 | None:intergenic |
| GACGCTTCCAATTCAGGAAT+TGG | 0.321227 | 1.2:-70260392 | MS.gene60659:CDS |
| GTTCCTATAAGAATGCTTCT+TGG | 0.324794 | 1.2:+70262311 | None:intergenic |
| CTCTAGGATTACTATAAATA+AGG | 0.334078 | 1.2:-70258591 | None:intergenic |
| TCTCTGAATGATTGTCTTTG+TGG | 0.337173 | 1.2:+70262843 | None:intergenic |
| CAAAGACCCGTTCAACAGTT+TGG | 0.339906 | 1.2:+70262751 | None:intergenic |
| TGTAGCTTTCCTTCAAAATC+AGG | 0.348866 | 1.2:+70262798 | None:intergenic |
| TTTGAATATCTCTAAGTGTT+TGG | 0.372498 | 1.2:+70263000 | None:intergenic |
| AATCCTTGTGGAACAGCTTC+TGG | 0.378323 | 1.2:+70261367 | None:intergenic |
| AACCGCGCCAATTCCTGAAT+TGG | 0.382822 | 1.2:+70260385 | None:intergenic |
| GGCATAAAATTCTTTATCAT+AGG | 0.389535 | 1.2:+70260292 | None:intergenic |
| CCGCTTACAGATTGCATAAA+GGG | 0.395776 | 1.2:-70260533 | MS.gene60659:intron |
| CCCGCTTACAGATTGCATAA+AGG | 0.395951 | 1.2:-70260534 | MS.gene60659:intron |
| TTTGTGCTTGCTCGGTCCAT+TGG | 0.405567 | 1.2:+70260501 | None:intergenic |
| TTCCTATAAGAATGCTTCTT+GGG | 0.406315 | 1.2:+70262312 | None:intergenic |
| TCTACGTGAAGCAATTATTT+GGG | 0.406611 | 1.2:-70259877 | MS.gene60659:CDS |
| TTGTTGCAGATGCTCTTAGA+AGG | 0.406915 | 1.2:-70260085 | MS.gene60659:CDS |
| AAATGCACAACAAGCACAAT+TGG | 0.413256 | 1.2:-70262934 | MS.gene60659:CDS |
| CGTCTAATGACCAGTATTGT+TGG | 0.414044 | 1.2:+70262373 | None:intergenic |
| AGCATTTGTTCAATTTCTAC+TGG | 0.417393 | 1.2:+70261412 | None:intergenic |
| AATTCAACTAATCAAGCTAC+TGG | 0.420334 | 1.2:-70259249 | MS.gene60659:CDS |
| TTACAGTTTCTTGTAACTGT+TGG | 0.421464 | 1.2:+70262955 | None:intergenic |
| TTAAAATTGGAGATTTGGTA+TGG | 0.425994 | 1.2:-70259020 | MS.gene60659:CDS |
| CAGTATTGTTGGAGTTGAAC+TGG | 0.437702 | 1.2:+70262384 | None:intergenic |
| ACTATGCAAATGAAAGTCAT+TGG | 0.441211 | 1.2:-70260044 | MS.gene60659:CDS |
| AGCCAATCAATGAACTCATC+TGG | 0.442778 | 1.2:+70262774 | None:intergenic |
| TGTGGACTCATTCTATAAGC+TGG | 0.449413 | 1.2:+70261280 | None:intergenic |
| TTGGCTCCAAACTGTTGAAC+GGG | 0.451354 | 1.2:-70262757 | MS.gene60659:CDS |
| AATGACTTTCATTTGCATAG+TGG | 0.452688 | 1.2:+70260046 | None:intergenic |
| TTCGAACACCTGGTCAAAGT+TGG | 0.453463 | 1.2:+70260424 | None:intergenic |
| CAGTTCAACTCCAACAATAC+TGG | 0.462929 | 1.2:-70262383 | MS.gene60659:CDS |
| ATCAGCTCTTGGTGACAACT+TGG | 0.464395 | 1.2:+70258957 | None:intergenic |
| TTGAAAGGACCATCAGCTCT+TGG | 0.469552 | 1.2:+70258946 | None:intergenic |
| TCATTTGCATAGTGGCAAGT+AGG | 0.470951 | 1.2:+70260054 | None:intergenic |
| TTGAGAATTCAAATGCTTGA+GGG | 0.471810 | 1.2:+70260196 | None:intergenic |
| ATCCAGATGAGTTCATTGAT+TGG | 0.473409 | 1.2:-70262776 | MS.gene60659:CDS |
| GTTCCGTATGCTACCTCAAA+AGG | 0.478007 | 1.2:+70259219 | None:intergenic |
| ACAATAGCTCGTTACCTTGG+TGG | 0.486510 | 1.2:-70262429 | MS.gene60659:CDS |
| CACTGATTCACAATCCTCTC+AGG | 0.487608 | 1.2:-70259961 | MS.gene60659:CDS |
| CATTTGCATAGTGGCAAGTA+GGG | 0.490498 | 1.2:+70260055 | None:intergenic |
| TACTGATGTTTATCTGATGA+TGG | 0.491367 | 1.2:+70259168 | None:intergenic |
| GCCCATGATGGAGGATTAGC+AGG | 0.491823 | 1.2:-70259852 | MS.gene60659:intron |
| TTGTCCGAGCCTTGCAACAT+TGG | 0.495282 | 1.2:-70260268 | MS.gene60659:CDS |
| AGAAACATGCTTCAATTTGG+TGG | 0.496507 | 1.2:-70262674 | MS.gene60659:CDS |
| TCGAACACCTGGTCAAAGTT+GGG | 0.496804 | 1.2:+70260425 | None:intergenic |
| AAAACGAAGCGAGCCCGTGA+TGG | 0.498927 | 1.2:-70262642 | MS.gene60659:CDS |
| CTATTAGGAATGACAGCTCC+AGG | 0.501761 | 1.2:+70261304 | None:intergenic |
| GTAATTTCAGCATGTTCTTG+TGG | 0.505204 | 1.2:+70261262 | None:intergenic |
| GACCTGCTAATCCTCCATCA+TGG | 0.508910 | 1.2:+70259850 | None:intergenic |
| AATCAATGACAATGCTTACA+AGG | 0.509061 | 1.2:-70258911 | MS.gene60659:intron |
| GACTCCAATGTTGCAAGGCT+CGG | 0.513210 | 1.2:+70260264 | None:intergenic |
| GAAACATGCTTCAATTTGGT+GGG | 0.515877 | 1.2:-70262673 | MS.gene60659:CDS |
| AACACTTAGAGATATTCAAA+TGG | 0.522436 | 1.2:-70262997 | MS.gene60659:CDS |
| GTTGAGAATTCAAATGCTTG+AGG | 0.523473 | 1.2:+70260195 | None:intergenic |
| TTTGTTCAATTTCTACTGGA+AGG | 0.526464 | 1.2:+70261416 | None:intergenic |
| AGCCCTTCCCAACTTTGACC+AGG | 0.535813 | 1.2:-70260432 | MS.gene60659:CDS |
| CGCATTGGCGGCAATCCTTG+TGG | 0.538161 | 1.2:+70261355 | None:intergenic |
| ATGTTGCAAGGCTCGGACAA+TGG | 0.549135 | 1.2:+70260271 | None:intergenic |
| ACCTGCTAATCCTCCATCAT+GGG | 0.552793 | 1.2:+70259851 | None:intergenic |
| TCAATCGCAGACATGCCGCT+TGG | 0.555509 | 1.2:-70260166 | MS.gene60659:CDS |
| CACAACTTACTTCGAACACC+TGG | 0.555960 | 1.2:+70260414 | None:intergenic |
| CAAACAATAGCTCGTTACCT+TGG | 0.556712 | 1.2:-70262432 | MS.gene60659:CDS |
| ATTATTTGGGAAGCCCATGA+TGG | 0.557585 | 1.2:-70259864 | MS.gene60659:CDS |
| GAAGTGCGACATTCATGAAA+GGG | 0.562630 | 1.2:-70262460 | MS.gene60659:CDS |
| TAAATGTTTCTCCACTCGTA+TGG | 0.571332 | 1.2:+70262335 | None:intergenic |
| ACACCTGGTCAAAGTTGGGA+AGG | 0.579818 | 1.2:+70260429 | None:intergenic |
| GCATGTTGAATGTCTCGCAT+TGG | 0.580836 | 1.2:+70261340 | None:intergenic |
| ATTGGCTCCAAACTGTTGAA+CGG | 0.582920 | 1.2:-70262758 | MS.gene60659:CDS |
| TGTTGAATGTCTCGCATTGG+CGG | 0.583286 | 1.2:+70261343 | None:intergenic |
| AGAGCACTGAGGAATACATA+AGG | 0.585072 | 1.2:+70259899 | None:intergenic |
| TGAAGTGCGACATTCATGAA+AGG | 0.588057 | 1.2:-70262461 | MS.gene60659:CDS |
| ATTCAGAGACAACGACATCA+AGG | 0.588760 | 1.2:-70262829 | MS.gene60659:CDS |
| TTTAGTGAAAAGCTCAACAA+TGG | 0.590823 | 1.2:-70260332 | MS.gene60659:CDS |
| AAGTTGTCACCAAGAGCTGA+TGG | 0.598597 | 1.2:-70258955 | MS.gene60659:CDS |
| CTGAGAGGATTGTGAATCAG+TGG | 0.599316 | 1.2:+70259962 | None:intergenic |
| ATTTGGGAAGCCCATGATGG+AGG | 0.605488 | 1.2:-70259861 | MS.gene60659:CDS |
| AAGTTGGGAAGGGCTAGCAC+TGG | 0.617784 | 1.2:+70260440 | None:intergenic |
| TGCATGAACAAGTTCGCCAA+CGG | 0.617808 | 1.2:-70259104 | MS.gene60659:CDS |
| TATTCGTTTAGCCATACGAG+TGG | 0.618851 | 1.2:-70262346 | MS.gene60659:CDS |
| GGCGCGGTTCTATGTCAAGA+AGG | 0.618948 | 1.2:-70260371 | MS.gene60659:CDS |
| TTATCTTGATAATAGTGAGA+AGG | 0.620206 | 1.2:+70262561 | None:intergenic |
| CACCTGGTCAAAGTTGGGAA+GGG | 0.621586 | 1.2:+70260430 | None:intergenic |
| TAAAGGGAGATCAATTCCAA+TGG | 0.621858 | 1.2:-70260517 | MS.gene60659:CDS |
| TCAGGACTACTACATACATG+AGG | 0.622132 | 1.2:-70259943 | MS.gene60659:CDS |
| GATGATGGAGTCAAGTCTAA+CGG | 0.626466 | 1.2:+70259183 | None:intergenic |
| GTACCAGAAGCTGTTCCACA+AGG | 0.633003 | 1.2:-70261370 | MS.gene60659:CDS |
| GTAATGACTCCAATGTTGCA+AGG | 0.650624 | 1.2:+70260259 | None:intergenic |
| CAGGACTACTACATACATGA+GGG | 0.656221 | 1.2:-70259942 | MS.gene60659:CDS |
| GTCAAGTCTAACGGACTGTG+TGG | 0.657876 | 1.2:+70259192 | None:intergenic |
| GTGCGACATTCATGAAAGGG+AGG | 0.658783 | 1.2:-70262457 | MS.gene60659:CDS |
| ATAAGAAGAATTCTCAGTGG+AGG | 0.665480 | 1.2:+70262284 | None:intergenic |
| TTCCAATTCAGGAATTGGCG+CGG | 0.668895 | 1.2:-70260387 | MS.gene60659:CDS |
| CGTCAGTGTTTAATCCACCA+AGG | 0.695957 | 1.2:+70262415 | None:intergenic |
| ATGTATGTAGTAGTCCTGAG+AGG | 0.716556 | 1.2:+70259947 | None:intergenic |
| GGGATAAGAAGAATTCTCAG+TGG | 0.734712 | 1.2:+70262281 | None:intergenic |
| GCTTCACGTAGAGAGCACTG+AGG | 0.862377 | 1.2:+70259888 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTGTACTATTTTGAA+AGG | + | chr1.2:70262685-70262704 | None:intergenic | 15.0% |
| !!! | TTAAATTCTTAAGTCATTTT+TGG | - | chr1.2:70262164-70262183 | MS.gene60659:intron | 15.0% |
| !! | TAGTGAAAGAAAATTTCTAT+TGG | - | chr1.2:70261813-70261832 | MS.gene60659:intron | 20.0% |
| !!! | TCCTTTTTTACTTAAACATA+AGG | - | chr1.2:70261490-70261509 | MS.gene60659:intron | 20.0% |
| ! | AAATTAGTAAATGGCAAACA+TGG | + | chr1.2:70262973-70262992 | None:intergenic | 25.0% |
| ! | AACACTTAGAGATATTCAAA+TGG | - | chr1.2:70258616-70258635 | MS.gene60659:intron | 25.0% |
| ! | AATGGACACAAATTAGTAAA+TGG | + | chr1.2:70262982-70263001 | None:intergenic | 25.0% |
| ! | ACTTATTGTTAATAGTAGAG+TGG | + | chr1.2:70262886-70262905 | None:intergenic | 25.0% |
| ! | CCACTCTATTATTTACAATA+AGG | - | chr1.2:70262939-70262958 | MS.gene60659:CDS | 25.0% |
| ! | CCTTATTGTAAATAATAGAG+TGG | + | chr1.2:70262942-70262961 | None:intergenic | 25.0% |
| ! | GCCTTATGTTTAAGTAAAAA+AGG | + | chr1.2:70261494-70261513 | None:intergenic | 25.0% |
| ! | GGCATAAAATTCTTTATCAT+AGG | + | chr1.2:70261324-70261343 | None:intergenic | 25.0% |
| ! | TATAAAATGAAGCTAATCCA+TGG | + | chr1.2:70261025-70261044 | None:intergenic | 25.0% |
| ! | TATTGTAAATAATAGAGTGG+TGG | + | chr1.2:70262939-70262958 | None:intergenic | 25.0% |
| ! | TCTAATAAATCATCAAGTCT+AGG | + | chr1.2:70260537-70260556 | None:intergenic | 25.0% |
| ! | TTAGTGATTAAAGACACTAA+TGG | + | chr1.2:70260099-70260118 | None:intergenic | 25.0% |
| ! | TTTGAATATCTCTAAGTGTT+TGG | + | chr1.2:70258616-70258635 | None:intergenic | 25.0% |
| !! | CGGTAAAAATCTAAAACAAT+GGG | - | chr1.2:70262306-70262325 | MS.gene60659:CDS | 25.0% |
| !! | TCGGTAAAAATCTAAAACAA+TGG | - | chr1.2:70262305-70262324 | MS.gene60659:CDS | 25.0% |
| !! | TTAAAATTGGAGATTTGGTA+TGG | - | chr1.2:70262593-70262612 | MS.gene60659:CDS | 25.0% |
| !! | TTATCTTGATAATAGTGAGA+AGG | + | chr1.2:70259055-70259074 | None:intergenic | 25.0% |
| !!! | GATTAGCTTCATTTTATAGA+AGG | - | chr1.2:70261027-70261046 | MS.gene60659:intron | 25.0% |
| !!! | TCATGAATTGATTTTGGAAT+AGG | + | chr1.2:70260990-70261009 | None:intergenic | 25.0% |
| !!! | TTTCAGTCAAAAGTTGTTTT+AGG | + | chr1.2:70261151-70261170 | None:intergenic | 25.0% |
| AAAAACCATCACTTCTGATA+GGG | - | chr1.2:70262138-70262157 | MS.gene60659:intron | 30.0% | |
| AAAAAGCAAGATCAAGACTT+GGG | - | chr1.2:70258994-70259013 | MS.gene60659:CDS | 30.0% | |
| AAATCATCAAGTCTAGGTAT+CGG | + | chr1.2:70260531-70260550 | None:intergenic | 30.0% | |
| AATCAATGACAATGCTTACA+AGG | - | chr1.2:70262702-70262721 | MS.gene60659:CDS | 30.0% | |
| AATGACTTTCATTTGCATAG+TGG | + | chr1.2:70261570-70261589 | None:intergenic | 30.0% | |
| AATTCAACTAATCAAGCTAC+TGG | - | chr1.2:70262364-70262383 | MS.gene60659:CDS | 30.0% | |
| ACCAAATGTTTCAAATGTCA+TGG | - | chr1.2:70259433-70259452 | MS.gene60659:intron | 30.0% | |
| ACTATGCAAATGAAAGTCAT+TGG | - | chr1.2:70261569-70261588 | MS.gene60659:intron | 30.0% | |
| AGCATTTGTTCAATTTCTAC+TGG | + | chr1.2:70260204-70260223 | None:intergenic | 30.0% | |
| ATGAACTTGATATAAACTCG+AGG | - | chr1.2:70262794-70262813 | MS.gene60659:CDS | 30.0% | |
| ATGAGCTCTTCATCATAAAT+TGG | + | chr1.2:70259583-70259602 | None:intergenic | 30.0% | |
| ATTGGCATAACAATCATGAT+GGG | + | chr1.2:70259989-70260008 | None:intergenic | 30.0% | |
| CATGGTAGTTGAAATAGTAA+TGG | + | chr1.2:70263000-70263019 | None:intergenic | 30.0% | |
| CATTACTATTTCAACTACCA+TGG | - | chr1.2:70262998-70263017 | MS.gene60659:CDS | 30.0% | |
| GATTTATTAGATCAGTTGCA+TGG | - | chr1.2:70260546-70260565 | MS.gene60659:intron | 30.0% | |
| TACTGATGTTTATCTGATGA+TGG | + | chr1.2:70262448-70262467 | None:intergenic | 30.0% | |
| TATTGGCATAACAATCATGA+TGG | + | chr1.2:70259990-70260009 | None:intergenic | 30.0% | |
| TATTGTTAATAGTAGAGTGG+TGG | + | chr1.2:70262883-70262902 | None:intergenic | 30.0% | |
| TCTACGTGAAGCAATTATTT+GGG | - | chr1.2:70261736-70261755 | MS.gene60659:intron | 30.0% | |
| TGAAGAAACATGCTTCAATT+TGG | - | chr1.2:70258936-70258955 | MS.gene60659:CDS | 30.0% | |
| TGTGATGTTATAATAGACAG+TGG | - | chr1.2:70259724-70259743 | MS.gene60659:intron | 30.0% | |
| TTACAGTTTCTTGTAACTGT+TGG | + | chr1.2:70258661-70258680 | None:intergenic | 30.0% | |
| TTCCTATAAGAATGCTTCTT+GGG | + | chr1.2:70259304-70259323 | None:intergenic | 30.0% | |
| TTGAGAATTCAAATGCTTGA+GGG | + | chr1.2:70261420-70261439 | None:intergenic | 30.0% | |
| TTTAGTGAAAAGCTCAACAA+TGG | - | chr1.2:70261281-70261300 | MS.gene60659:CDS | 30.0% | |
| TTTGTTCAATTTCTACTGGA+AGG | + | chr1.2:70260200-70260219 | None:intergenic | 30.0% | |
| ! | AAGATCGATCTTTGAAAAGA+TGG | + | chr1.2:70260577-70260596 | None:intergenic | 30.0% |
| ! | AATTTTGCTGAATTATCCGT+TGG | + | chr1.2:70262528-70262547 | None:intergenic | 30.0% |
| ! | ACCATGACATTTGAAACATT+TGG | + | chr1.2:70259437-70259456 | None:intergenic | 30.0% |
| ! | ATCCAGATTTTCAAAAGTCT+TGG | - | chr1.2:70261624-70261643 | MS.gene60659:intron | 30.0% |
| ! | ATTCTATAAGCTGGTCTATT+AGG | + | chr1.2:70260327-70260346 | None:intergenic | 30.0% |
| ! | GCATATAAAAACCAGTGTTT+TGG | + | chr1.2:70261910-70261929 | None:intergenic | 30.0% |
| ! | GTAGATATTCCTGATTTTGA+AGG | - | chr1.2:70258806-70258825 | MS.gene60659:intron | 30.0% |
| ! | TAAACATCTCTTTCAAGTCT+TGG | + | chr1.2:70261839-70261858 | None:intergenic | 30.0% |
| ! | TGTGGATAGATTTTCAAAGA+TGG | - | chr1.2:70262027-70262046 | MS.gene60659:intron | 30.0% |
| ! | TGTTTCAAATGTCATGGTTT+TGG | - | chr1.2:70259439-70259458 | MS.gene60659:intron | 30.0% |
| ! | TTGAAACATTTGGTAGCTTT+GGG | + | chr1.2:70259427-70259446 | None:intergenic | 30.0% |
| ! | TTTGAAACATTTGGTAGCTT+TGG | + | chr1.2:70259428-70259447 | None:intergenic | 30.0% |
| ! | TTTTACTCCATCTTTGACAA+AGG | + | chr1.2:70260019-70260038 | None:intergenic | 30.0% |
| ! | TTTTCACTAAAGAAGGCTAT+AGG | + | chr1.2:70261272-70261291 | None:intergenic | 30.0% |
| !! | AGAAGTATCAAGATCAAGTT+TGG | - | chr1.2:70259896-70259915 | MS.gene60659:CDS | 30.0% |
| !! | CTCACATCATGAATTGATTT+TGG | + | chr1.2:70260996-70261015 | None:intergenic | 30.0% |
| !! | TTCCAAGACTTTTGAAAATC+TGG | + | chr1.2:70261629-70261648 | None:intergenic | 30.0% |
| !!! | AAAACTTTTTTGTGCTTGCT+CGG | + | chr1.2:70261123-70261142 | None:intergenic | 30.0% |
| !!! | CATCATTAGTCTTTTGACAT+GGG | + | chr1.2:70262063-70262082 | None:intergenic | 30.0% |
| !!! | CATCTTTTTCAGATTCATCT+CGG | + | chr1.2:70259549-70259568 | None:intergenic | 30.0% |
| !!! | TTGTTTTTATCAAGTCCACT+CGG | + | chr1.2:70260063-70260082 | None:intergenic | 30.0% |
| AAAACAATGGGATCTCATCT+TGG | - | chr1.2:70262318-70262337 | MS.gene60659:CDS | 35.0% | |
| AAACTACAATGGCTCAACAA+AGG | - | chr1.2:70259823-70259842 | MS.gene60659:intron | 35.0% | |
| AAATGCACAACAAGCACAAT+TGG | - | chr1.2:70258679-70258698 | MS.gene60659:intron | 35.0% | |
| AAGGAAATTGTTCGTCTTCA+TGG | - | chr1.2:70262109-70262128 | MS.gene60659:intron | 35.0% | |
| ACTACAAACTTGCCAATGAA+TGG | + | chr1.2:70260753-70260772 | None:intergenic | 35.0% | |
| AGAAACATGCTTCAATTTGG+TGG | - | chr1.2:70258939-70258958 | MS.gene60659:CDS | 35.0% | |
| ATAAGAAGAATTCTCAGTGG+AGG | + | chr1.2:70259332-70259351 | None:intergenic | 35.0% | |
| ATAGGATAAAGCTCATGGTT+TGG | + | chr1.2:70260152-70260171 | None:intergenic | 35.0% | |
| ATCCAGATGAGTTCATTGAT+TGG | - | chr1.2:70258837-70258856 | MS.gene60659:intron | 35.0% | |
| ATCTTGATACTTCTGACCAA+TGG | + | chr1.2:70259890-70259909 | None:intergenic | 35.0% | |
| ATTCATTGGCAAGTTTGTAG+TGG | - | chr1.2:70260752-70260771 | MS.gene60659:intron | 35.0% | |
| CAAAAACCATCACTTCTGAT+AGG | - | chr1.2:70262137-70262156 | MS.gene60659:intron | 35.0% | |
| CCAGAGATGGTTTATATGAA+TGG | - | chr1.2:70260658-70260677 | MS.gene60659:intron | 35.0% | |
| CCATTCATATAAACCATCTC+TGG | + | chr1.2:70260661-70260680 | None:intergenic | 35.0% | |
| CTCATCCTTACAAACTACAA+TGG | - | chr1.2:70259812-70259831 | MS.gene60659:intron | 35.0% | |
| CTCTACGTGAAGCAATTATT+TGG | - | chr1.2:70261735-70261754 | MS.gene60659:intron | 35.0% | |
| GAAAAAGCAAGATCAAGACT+TGG | - | chr1.2:70258993-70259012 | MS.gene60659:CDS | 35.0% | |
| GAAACATGCTTCAATTTGGT+GGG | - | chr1.2:70258940-70258959 | MS.gene60659:CDS | 35.0% | |
| GAACAATAGGATAAAGCTCA+TGG | + | chr1.2:70260157-70260176 | None:intergenic | 35.0% | |
| GACCAATGGAAAAATTCACA+AGG | + | chr1.2:70259876-70259895 | None:intergenic | 35.0% | |
| GATTAAAGACACTAATGGCT+TGG | + | chr1.2:70260094-70260113 | None:intergenic | 35.0% | |
| GTAATTTCAGCATGTTCTTG+TGG | + | chr1.2:70260354-70260373 | None:intergenic | 35.0% | |
| GTATAAGTCAGCAACTTGAA+CGG | + | chr1.2:70262086-70262105 | None:intergenic | 35.0% | |
| GTTCCTATAAGAATGCTTCT+TGG | + | chr1.2:70259305-70259324 | None:intergenic | 35.0% | |
| GTTGAGAATTCAAATGCTTG+AGG | + | chr1.2:70261421-70261440 | None:intergenic | 35.0% | |
| TAAAGGGAGATCAATTCCAA+TGG | - | chr1.2:70261096-70261115 | MS.gene60659:intron | 35.0% | |
| TAAATGTTTCTCCACTCGTA+TGG | + | chr1.2:70259281-70259300 | None:intergenic | 35.0% | |
| TATCGGAAATCGATACTTGA+TGG | + | chr1.2:70260514-70260533 | None:intergenic | 35.0% | |
| TCAAGTTCATCATCCAGATA+TGG | + | chr1.2:70262784-70262803 | None:intergenic | 35.0% | |
| TCTCTGAATGATTGTCTTTG+TGG | + | chr1.2:70258773-70258792 | None:intergenic | 35.0% | |
| TGTAGCTTTCCTTCAAAATC+AGG | + | chr1.2:70258818-70258837 | None:intergenic | 35.0% | |
| TTAATCTGTATCATTCTCCC+CGG | + | chr1.2:70262836-70262855 | None:intergenic | 35.0% | |
| TTGTAAAAACTCACTCCAAG+CGG | + | chr1.2:70261465-70261484 | None:intergenic | 35.0% | |
| TTTGACAAAGGAGTAGGTAT+TGG | + | chr1.2:70260007-70260026 | None:intergenic | 35.0% | |
| ! | AACTTGGCATTTGGTTGTTT+TGG | + | chr1.2:70262643-70262662 | None:intergenic | 35.0% |
| ! | ACTGCATTTAAAACCAGAGA+TGG | - | chr1.2:70260645-70260664 | MS.gene60659:intron | 35.0% |
| ! | ATCGATCTTTGAAAAGATGG+TGG | + | chr1.2:70260574-70260593 | None:intergenic | 35.0% |
| ! | CATGAGGGATTTTTGTTCAA+AGG | - | chr1.2:70261686-70261705 | MS.gene60659:intron | 35.0% |
| ! | CATTGTAGTTTGTAAGGATG+AGG | + | chr1.2:70259814-70259833 | None:intergenic | 35.0% |
| ! | CTATCAGAAGTGATGGTTTT+TGG | + | chr1.2:70262139-70262158 | None:intergenic | 35.0% |
| ! | CTGCATTTTCTTCGAACAAT+AGG | + | chr1.2:70260170-70260189 | None:intergenic | 35.0% |
| ! | GAAGCTGTTAACAGGATTTT+GGG | - | chr1.2:70262262-70262281 | MS.gene60659:intron | 35.0% |
| ! | GTTGAGCTTTTCACTAAAGA+AGG | + | chr1.2:70261279-70261298 | None:intergenic | 35.0% |
| ! | TAATAGAGTGGTGGAATATG+AGG | + | chr1.2:70262930-70262949 | None:intergenic | 35.0% |
| ! | TACTGGAAAATGTCCTTTTG+AGG | - | chr1.2:70262381-70262400 | MS.gene60659:CDS | 35.0% |
| ! | TGAAGCTGTTAACAGGATTT+TGG | - | chr1.2:70262261-70262280 | MS.gene60659:intron | 35.0% |
| ! | TGCCTTGTGAATTTTTCCAT+TGG | - | chr1.2:70259871-70259890 | MS.gene60659:CDS | 35.0% |
| ! | TTGAGCCATTGTAGTTTGTA+AGG | + | chr1.2:70259820-70259839 | None:intergenic | 35.0% |
| !! | AGTTGCTGACTTATACTTCA+AGG | - | chr1.2:70262090-70262109 | MS.gene60659:intron | 35.0% |
| !! | ATTTTAGTCCCCAAAAAGGA+TGG | - | chr1.2:70260444-70260463 | MS.gene60659:CDS | 35.0% |
| !! | ATTTTTGGAGAACCTTATGG+AGG | - | chr1.2:70262179-70262198 | MS.gene60659:intron | 35.0% |
| !! | CATGCTATTGACTTTATTCC+TGG | - | chr1.2:70260291-70260310 | MS.gene60659:CDS | 35.0% |
| !! | TACCCAAGAAGCATTCTTAT+AGG | - | chr1.2:70259299-70259318 | MS.gene60659:intron | 35.0% |
| !! | TGCAATTTTAGTCCCCAAAA+AGG | - | chr1.2:70260440-70260459 | MS.gene60659:CDS | 35.0% |
| !! | TTATTTTCTGCAGTGGGTTT+AGG | + | chr1.2:70259403-70259422 | None:intergenic | 35.0% |
| !! | TTGGGTTTATTTTCTGCAGT+GGG | + | chr1.2:70259409-70259428 | None:intergenic | 35.0% |
| !! | TTTGGGTTTATTTTCTGCAG+TGG | + | chr1.2:70259410-70259429 | None:intergenic | 35.0% |
| !! | TTTTTGGGGACTAAAATTGC+AGG | + | chr1.2:70260441-70260460 | None:intergenic | 35.0% |
| !!! | AAAACCAGTGTTTTGGCTTT+TGG | + | chr1.2:70261903-70261922 | None:intergenic | 35.0% |
| !!! | AGTGTTTGGTCGTTTTTTCT+TGG | + | chr1.2:70258602-70258621 | None:intergenic | 35.0% |
| !!! | CAGACAAGTTTTTTTGACGA+AGG | + | chr1.2:70259096-70259115 | None:intergenic | 35.0% |
| !!! | GCATCATTAGTCTTTTGACA+TGG | + | chr1.2:70262064-70262083 | None:intergenic | 35.0% |
| !!! | GTCATTTTTGGAGAACCTTA+TGG | - | chr1.2:70262176-70262195 | MS.gene60659:intron | 35.0% |
| !!! | TGATCTTGCTTTTTCCATCA+CGG | + | chr1.2:70258988-70259007 | None:intergenic | 35.0% |
| AAAATTGCAGGAACAGCACA+AGG | + | chr1.2:70260429-70260448 | None:intergenic | 40.0% | |
| AAATTGCAGGAACAGCACAA+GGG | + | chr1.2:70260428-70260447 | None:intergenic | 40.0% | |
| AACATCCCTATCAGAAGTGA+TGG | + | chr1.2:70262146-70262165 | None:intergenic | 40.0% | |
| AAGATGTCGAGTCTGTCATT+TGG | - | chr1.2:70261871-70261890 | MS.gene60659:intron | 40.0% | |
| ACCTACTCCTTTGTCAAAGA+TGG | - | chr1.2:70260009-70260028 | MS.gene60659:CDS | 40.0% | |
| ACTTTGTCCTTGGATTACCT+CGG | - | chr1.2:70261972-70261991 | MS.gene60659:intron | 40.0% | |
| AGAACCATCACCATCATCAA+AGG | - | chr1.2:70259490-70259509 | MS.gene60659:intron | 40.0% | |
| AGAACCTTATGGAGGAAGAT+GGG | - | chr1.2:70262187-70262206 | MS.gene60659:intron | 40.0% | |
| AGAAGATGACATGCATCCAT+TGG | + | chr1.2:70259934-70259953 | None:intergenic | 40.0% | |
| AGCCAATCAATGAACTCATC+TGG | + | chr1.2:70258842-70258861 | None:intergenic | 40.0% | |
| AGCTTATGAAGAAGCTGATG+AGG | - | chr1.2:70259516-70259535 | MS.gene60659:intron | 40.0% | |
| AGGTTCAAGCCATCAATAGT+TGG | - | chr1.2:70260964-70260983 | MS.gene60659:intron | 40.0% | |
| ATAAGCTTCGCCTTTGATGA+TGG | + | chr1.2:70259503-70259522 | None:intergenic | 40.0% | |
| ATCCAGATATGGTGAAAGGT+CGG | + | chr1.2:70262773-70262792 | None:intergenic | 40.0% | |
| ATGAGGTAAGGAATGATGCA+AGG | + | chr1.2:70262913-70262932 | None:intergenic | 40.0% | |
| ATGTATGTAGTAGTCCTGAG+AGG | + | chr1.2:70261669-70261688 | None:intergenic | 40.0% | |
| ATTATTTGGGAAGCCCATGA+TGG | - | chr1.2:70261749-70261768 | MS.gene60659:intron | 40.0% | |
| ATTCAGAGACAACGACATCA+AGG | - | chr1.2:70258784-70258803 | MS.gene60659:intron | 40.0% | |
| CAAACAATAGCTCGTTACCT+TGG | - | chr1.2:70259181-70259200 | MS.gene60659:CDS | 40.0% | |
| CAACAAAGGTAGTGAAGTGA+AGG | - | chr1.2:70259837-70259856 | MS.gene60659:intron | 40.0% | |
| CAAGTACTTCGACCATTCAT+TGG | - | chr1.2:70260738-70260757 | MS.gene60659:intron | 40.0% | |
| CAGCAGTGATTATGTAACCT+AGG | + | chr1.2:70260920-70260939 | None:intergenic | 40.0% | |
| CAGGACTACTACATACATGA+GGG | - | chr1.2:70261671-70261690 | MS.gene60659:intron | 40.0% | |
| CAGTATTGTTGGAGTTGAAC+TGG | + | chr1.2:70259232-70259251 | None:intergenic | 40.0% | |
| CAGTGGTAGTTGTGAAAATG+TGG | - | chr1.2:70259741-70259760 | MS.gene60659:intron | 40.0% | |
| CAGTTCAACTCCAACAATAC+TGG | - | chr1.2:70259230-70259249 | MS.gene60659:CDS | 40.0% | |
| CATCATCCAGATATGGTGAA+AGG | + | chr1.2:70262777-70262796 | None:intergenic | 40.0% | |
| CATGATGTGAGAAGTTTCCA+TGG | - | chr1.2:70261005-70261024 | MS.gene60659:intron | 40.0% | |
| CATTTGCATAGTGGCAAGTA+GGG | + | chr1.2:70261561-70261580 | None:intergenic | 40.0% | |
| CCCTTTATGCAATCTGTAAG+CGG | + | chr1.2:70261083-70261102 | None:intergenic | 40.0% | |
| CCGCTTACAGATTGCATAAA+GGG | - | chr1.2:70261080-70261099 | MS.gene60659:intron | 40.0% | |
| CCTTTATGCAATCTGTAAGC+GGG | + | chr1.2:70261082-70261101 | None:intergenic | 40.0% | |
| CGTCTAATGACCAGTATTGT+TGG | + | chr1.2:70259243-70259262 | None:intergenic | 40.0% | |
| CTTGATCTACAGCAAACACA+AGG | - | chr1.2:70260791-70260810 | MS.gene60659:intron | 40.0% | |
| CTTTATGCAATCTGTAAGCG+GGG | + | chr1.2:70261081-70261100 | None:intergenic | 40.0% | |
| GAAGTGCGACATTCATGAAA+GGG | - | chr1.2:70259153-70259172 | MS.gene60659:CDS | 40.0% | |
| GAAGTGGATACCATCAAATC+AGG | - | chr1.2:70260598-70260617 | MS.gene60659:intron | 40.0% | |
| GACAAACTGAAGCTGTTAAC+AGG | - | chr1.2:70262254-70262273 | MS.gene60659:intron | 40.0% | |
| GACTCAGTTCAAAGAAGCTT+TGG | - | chr1.2:70260119-70260138 | MS.gene60659:CDS | 40.0% | |
| GATACCATCAAATCAGGCTT+AGG | - | chr1.2:70260604-70260623 | MS.gene60659:intron | 40.0% | |
| GGGATAAGAAGAATTCTCAG+TGG | + | chr1.2:70259335-70259354 | None:intergenic | 40.0% | |
| GGTTACATAATCACTGCTGA+AGG | - | chr1.2:70260921-70260940 | MS.gene60659:intron | 40.0% | |
| GTAATGACTCCAATGTTGCA+AGG | + | chr1.2:70261357-70261376 | None:intergenic | 40.0% | |
| TAATCTGTATCATTCTCCCC+GGG | + | chr1.2:70262835-70262854 | None:intergenic | 40.0% | |
| TATAGTAATCCTAGAGGCCA+TGG | + | chr1.2:70263018-70263037 | None:intergenic | 40.0% | |
| TATTCGTTTAGCCATACGAG+TGG | - | chr1.2:70259267-70259286 | MS.gene60659:CDS | 40.0% | |
| TCAAAGATCGATCTTCGAAG+TGG | - | chr1.2:70260582-70260601 | MS.gene60659:intron | 40.0% | |
| TCAGGACTACTACATACATG+AGG | - | chr1.2:70261670-70261689 | MS.gene60659:intron | 40.0% | |
| TCATTTGCATAGTGGCAAGT+AGG | + | chr1.2:70261562-70261581 | None:intergenic | 40.0% | |
| TCCATCTTTGACAAAGGAGT+AGG | + | chr1.2:70260013-70260032 | None:intergenic | 40.0% | |
| TGAAGTGCGACATTCATGAA+AGG | - | chr1.2:70259152-70259171 | MS.gene60659:CDS | 40.0% | |
| TGGAATAGGCCAACTATTGA+TGG | + | chr1.2:70260976-70260995 | None:intergenic | 40.0% | |
| TGTGGACTCATTCTATAAGC+TGG | + | chr1.2:70260336-70260355 | None:intergenic | 40.0% | |
| TTCAGTTTGTCCATCTGTCT+GGG | + | chr1.2:70262245-70262264 | None:intergenic | 40.0% | |
| TTGATTCATGAGACGCATGA+AGG | + | chr1.2:70260721-70260740 | None:intergenic | 40.0% | |
| TTGTTGCAGATGCTCTTAGA+AGG | - | chr1.2:70261528-70261547 | MS.gene60659:intron | 40.0% | |
| ! | AAATGGCAAACATGGCTTGT+TGG | + | chr1.2:70262965-70262984 | None:intergenic | 40.0% |
| ! | AAATGTGGTGTCGAACTACA+TGG | - | chr1.2:70259756-70259775 | MS.gene60659:intron | 40.0% |
| ! | AATGGACAGTGATGCCATTT+GGG | - | chr1.2:70260676-70260695 | MS.gene60659:intron | 40.0% |
| ! | AGTGGTGGAATATGAGGTAA+GGG | + | chr1.2:70262868-70262887 | None:intergenic | 40.0% |
| ! | ATCACAAACTTTTCCAGCAG+TGG | + | chr1.2:70259710-70259729 | None:intergenic | 40.0% |
| ! | ATTGGCTCCAAACTGTTGAA+CGG | - | chr1.2:70258855-70258874 | MS.gene60659:intron | 40.0% |
| ! | CAGCTTCTGGTACAACATTT+TGG | + | chr1.2:70260236-70260255 | None:intergenic | 40.0% |
| ! | CTCCAGTTTCCATCCTTTTT+GGG | + | chr1.2:70260456-70260475 | None:intergenic | 40.0% |
| ! | CTGATCGTTGTCTGTTTTAC+GGG | + | chr1.2:70259356-70259375 | None:intergenic | 40.0% |
| ! | GCTGATCGTTGTCTGTTTTA+CGG | + | chr1.2:70259357-70259376 | None:intergenic | 40.0% |
| ! | GGAGCATTAGATAACCCAAA+TGG | + | chr1.2:70260693-70260712 | None:intergenic | 40.0% |
| ! | TAGTAGAGTGGTGGAATATG+AGG | + | chr1.2:70262874-70262893 | None:intergenic | 40.0% |
| ! | TCCAGTTTCCATCCTTTTTG+GGG | + | chr1.2:70260455-70260474 | None:intergenic | 40.0% |
| ! | TCTCCAGTTTCCATCCTTTT+TGG | + | chr1.2:70260457-70260476 | None:intergenic | 40.0% |
| ! | TGATCGTTGTCTGTTTTACG+GGG | + | chr1.2:70259355-70259374 | None:intergenic | 40.0% |
| ! | TTTTTATCAAGTCCACTCGG+TGG | + | chr1.2:70260060-70260079 | None:intergenic | 40.0% |
| !! | AGAGCACTGAGGAATACATA+AGG | + | chr1.2:70261717-70261736 | None:intergenic | 40.0% |
| !! | GATGATGGAGTCAAGTCTAA+CGG | + | chr1.2:70262433-70262452 | None:intergenic | 40.0% |
| !! | GGATTTTGGGAAACCTACTT+CGG | - | chr1.2:70262275-70262294 | MS.gene60659:intron | 40.0% |
| !!! | GAAGGTTTTGCAGAAGTACT+AGG | + | chr1.2:70259379-70259398 | None:intergenic | 40.0% |
| !!! | GATCTTGCTTTTTCCATCAC+GGG | + | chr1.2:70258987-70259006 | None:intergenic | 40.0% |
| !!! | GTTTGGTCGTTTTTTCTTGG+AGG | + | chr1.2:70258599-70258618 | None:intergenic | 40.0% |
| !!! | TGTCCTTTTGAGGTAGCATA+CGG | - | chr1.2:70262391-70262410 | MS.gene60659:CDS | 40.0% |
| AAGGCCAAAAGCCAAAACAC+TGG | - | chr1.2:70261896-70261915 | MS.gene60659:intron | 45.0% | |
| AAGTTGTCACCAAGAGCTGA+TGG | - | chr1.2:70262658-70262677 | MS.gene60659:CDS | 45.0% | |
| AATCCTTGTGGAACAGCTTC+TGG | + | chr1.2:70260249-70260268 | None:intergenic | 45.0% | |
| ACAATAGCTCGTTACCTTGG+TGG | - | chr1.2:70259184-70259203 | MS.gene60659:CDS | 45.0% | |
| ACCTAGGAAAGTAACCTCGT+TGG | + | chr1.2:70260904-70260923 | None:intergenic | 45.0% | |
| ACCTGCTAATCCTCCATCAT+GGG | + | chr1.2:70261765-70261784 | None:intergenic | 45.0% | |
| ACCTTGGGAAGATGTTAGCA+TGG | - | chr1.2:70261949-70261968 | MS.gene60659:intron | 45.0% | |
| AGTACCCATCTTCCTCCATA+AGG | + | chr1.2:70262194-70262213 | None:intergenic | 45.0% | |
| AGTTGTGACGCTTCCAATTC+AGG | - | chr1.2:70261215-70261234 | MS.gene60659:intron | 45.0% | |
| ATGTTCCTTCCTAACCAACG+AGG | - | chr1.2:70260887-70260906 | MS.gene60659:intron | 45.0% | |
| CAAAGACCCGTTCAACAGTT+TGG | + | chr1.2:70258865-70258884 | None:intergenic | 45.0% | |
| CACAACTTACTTCGAACACC+TGG | + | chr1.2:70261202-70261221 | None:intergenic | 45.0% | |
| CCCGCTTACAGATTGCATAA+AGG | - | chr1.2:70261079-70261098 | MS.gene60659:intron | 45.0% | |
| CGTCAGTGTTTAATCCACCA+AGG | + | chr1.2:70259201-70259220 | None:intergenic | 45.0% | |
| CTACCATCACAGAATCCTTC+TGG | + | chr1.2:70262006-70262025 | None:intergenic | 45.0% | |
| CTATTAGGAATGACAGCTCC+AGG | + | chr1.2:70260312-70260331 | None:intergenic | 45.0% | |
| CTGAGAGGATTGTGAATCAG+TGG | + | chr1.2:70261654-70261673 | None:intergenic | 45.0% | |
| CTTCAGTTTGTCCATCTGTC+TGG | + | chr1.2:70262246-70262265 | None:intergenic | 45.0% | |
| GAATGGACAGTGATGCCATT+TGG | - | chr1.2:70260675-70260694 | MS.gene60659:intron | 45.0% | |
| GACGCTTCCAATTCAGGAAT+TGG | - | chr1.2:70261221-70261240 | MS.gene60659:intron | 45.0% | |
| GAGAACCTTATGGAGGAAGA+TGG | - | chr1.2:70262186-70262205 | MS.gene60659:intron | 45.0% | |
| GAGCTCATTGTTGCTGATCA+TGG | - | chr1.2:70259595-70259614 | MS.gene60659:intron | 45.0% | |
| GATCTACAGCAAACACAAGG+AGG | - | chr1.2:70260794-70260813 | MS.gene60659:intron | 45.0% | |
| GATGACTAGCACTACTGAAC+TGG | + | chr1.2:70262222-70262241 | None:intergenic | 45.0% | |
| GATGCATGTCATCTTCTCCT+TGG | - | chr1.2:70259937-70259956 | MS.gene60659:CDS | 45.0% | |
| GCATGTTGAATGTCTCGCAT+TGG | + | chr1.2:70260276-70260295 | None:intergenic | 45.0% | |
| GCTTACAAGGTAGAATTGCC+AGG | - | chr1.2:70262715-70262734 | MS.gene60659:CDS | 45.0% | |
| GGATGAGGATGACTTTGTGT+TGG | + | chr1.2:70259799-70259818 | None:intergenic | 45.0% | |
| GGATTCTGTGATGGTAGTTG+TGG | - | chr1.2:70262009-70262028 | MS.gene60659:intron | 45.0% | |
| GGTAAGGAATGATGCAAGGT+AGG | + | chr1.2:70262909-70262928 | None:intergenic | 45.0% | |
| GTAGAATTGCCAGGAACCTA+TGG | - | chr1.2:70262724-70262743 | MS.gene60659:CDS | 45.0% | |
| GTCAAGTCGAAGAATTGCTG+AGG | - | chr1.2:70260376-70260395 | MS.gene60659:CDS | 45.0% | |
| GTCGAAGAATTGCTGAGGAA+AGG | - | chr1.2:70260381-70260400 | MS.gene60659:CDS | 45.0% | |
| GTTAGCATGGACTTTGTCCT+TGG | - | chr1.2:70261962-70261981 | MS.gene60659:intron | 45.0% | |
| GTTCCGTATGCTACCTCAAA+AGG | + | chr1.2:70262397-70262416 | None:intergenic | 45.0% | |
| TCAGTTTGTCCATCTGTCTG+GGG | + | chr1.2:70262244-70262263 | None:intergenic | 45.0% | |
| TCCATGCTAACATCTTCCCA+AGG | + | chr1.2:70261953-70261972 | None:intergenic | 45.0% | |
| TCCCCAAAAAGGATGGAAAC+TGG | - | chr1.2:70260451-70260470 | MS.gene60659:CDS | 45.0% | |
| TCGAACACCTGGTCAAAGTT+GGG | + | chr1.2:70261191-70261210 | None:intergenic | 45.0% | |
| TGAAAGGTCGGCAACATTGA+AGG | + | chr1.2:70262761-70262780 | None:intergenic | 45.0% | |
| TGCATGAACAAGTTCGCCAA+CGG | - | chr1.2:70262509-70262528 | MS.gene60659:CDS | 45.0% | |
| TGTTGAATGTCTCGCATTGG+CGG | + | chr1.2:70260273-70260292 | None:intergenic | 45.0% | |
| TTAACTCCATTACCACCGAG+TGG | - | chr1.2:70260045-70260064 | MS.gene60659:CDS | 45.0% | |
| TTCCAATTCAGGAATTGGCG+CGG | - | chr1.2:70261226-70261245 | MS.gene60659:intron | 45.0% | |
| TTCGAACACCTGGTCAAAGT+TGG | + | chr1.2:70261192-70261211 | None:intergenic | 45.0% | |
| TTGAAAGGACCATCAGCTCT+TGG | + | chr1.2:70262670-70262689 | None:intergenic | 45.0% | |
| TTGGCTCCAAACTGTTGAAC+GGG | - | chr1.2:70258856-70258875 | MS.gene60659:intron | 45.0% | |
| TTGGTGTGATGTCGTTCCAA+TGG | - | chr1.2:70259915-70259934 | MS.gene60659:CDS | 45.0% | |
| TTTCAACTACCATGGCCTCT+AGG | - | chr1.2:70263006-70263025 | MS.gene60659:CDS | 45.0% | |
| ! | AACCTACTTCGGAGCTTTGT+CGG | - | chr1.2:70262286-70262305 | MS.gene60659:CDS | 45.0% |
| ! | ACCAACGAGGTTACTTTCCT+AGG | - | chr1.2:70260900-70260919 | MS.gene60659:intron | 45.0% |
| ! | AGTAACCTCGTTGGTTAGGA+AGG | + | chr1.2:70260895-70260914 | None:intergenic | 45.0% |
| ! | ATCAGCTCTTGGTGACAACT+TGG | + | chr1.2:70262659-70262678 | None:intergenic | 45.0% |
| ! | ATTGATGGCTTGAACCTTGC+TGG | + | chr1.2:70260961-70260980 | None:intergenic | 45.0% |
| ! | CTTGGTGACAACTTGGCATT+TGG | + | chr1.2:70262652-70262671 | None:intergenic | 45.0% |
| ! | GAGTGGTGGAATATGAGGTA+AGG | + | chr1.2:70262869-70262888 | None:intergenic | 45.0% |
| ! | GGAAAGTAACCTCGTTGGTT+AGG | + | chr1.2:70260899-70260918 | None:intergenic | 45.0% |
| ! | TCGAGTCTGTCATTTGGCAA+AGG | - | chr1.2:70261877-70261896 | MS.gene60659:intron | 45.0% |
| ! | TGTCAGCTCAAGAAGAGCAT+TGG | - | chr1.2:70259653-70259672 | MS.gene60659:intron | 45.0% |
| ! | TTGATGGCTTGAACCTTGCT+GGG | + | chr1.2:70260960-70260979 | None:intergenic | 45.0% |
| !! | ATGAGACGCATGAAGGTACT+TGG | + | chr1.2:70260714-70260733 | None:intergenic | 45.0% |
| !! | CACTGATTCACAATCCTCTC+AGG | - | chr1.2:70261652-70261671 | MS.gene60659:intron | 45.0% |
| !! | GGAGGATTAGCAGGTCATTT+TGG | - | chr1.2:70261770-70261789 | MS.gene60659:intron | 45.0% |
| !! | TTCGCCTTTGATGATGGTGA+TGG | + | chr1.2:70259497-70259516 | None:intergenic | 45.0% |
| AACCGCGCCAATTCCTGAAT+TGG | + | chr1.2:70261231-70261250 | None:intergenic | 50.0% | |
| ACACCTGGTCAAAGTTGGGA+AGG | + | chr1.2:70261187-70261206 | None:intergenic | 50.0% | |
| ACGCCAGAAGGATTCTGTGA+TGG | - | chr1.2:70262000-70262019 | MS.gene60659:intron | 50.0% | |
| AGGACGAGTTCTGTTCAACC+CGG | - | chr1.2:70262814-70262833 | MS.gene60659:CDS | 50.0% | |
| ATCTTCTCCTTGGAAGACCC+TGG | - | chr1.2:70259947-70259966 | MS.gene60659:CDS | 50.0% | |
| ATGTTGCAAGGCTCGGACAA+TGG | + | chr1.2:70261345-70261364 | None:intergenic | 50.0% | |
| ATTTGGGAAGCCCATGATGG+AGG | - | chr1.2:70261752-70261771 | MS.gene60659:intron | 50.0% | |
| CACCTGGTCAAAGTTGGGAA+GGG | + | chr1.2:70261186-70261205 | None:intergenic | 50.0% | |
| CATCAAATCAGGCTTAGGCC+AGG | - | chr1.2:70260609-70260628 | MS.gene60659:intron | 50.0% | |
| GAAGGTTGCTGAGACACCAT+AGG | + | chr1.2:70262743-70262762 | None:intergenic | 50.0% | |
| GACCTGCTAATCCTCCATCA+TGG | + | chr1.2:70261766-70261785 | None:intergenic | 50.0% | |
| GACTCCAATGTTGCAAGGCT+CGG | + | chr1.2:70261352-70261371 | None:intergenic | 50.0% | |
| GCAGTCTTCCATTCATCTCC+TGG | + | chr1.2:70260630-70260649 | None:intergenic | 50.0% | |
| GTACCAGAAGCTGTTCCACA+AGG | - | chr1.2:70260243-70260262 | MS.gene60659:CDS | 50.0% | |
| GTGCGACATTCATGAAAGGG+AGG | - | chr1.2:70259156-70259175 | MS.gene60659:CDS | 50.0% | |
| GTTGAGTCCGAGGTAATCCA+AGG | + | chr1.2:70261982-70262001 | None:intergenic | 50.0% | |
| TACCGACAAAGCTCCGAAGT+AGG | + | chr1.2:70262291-70262310 | None:intergenic | 50.0% | |
| TGATGGCTTGAACCTTGCTG+GGG | + | chr1.2:70260959-70260978 | None:intergenic | 50.0% | |
| TGCCGACCTTTCACCATATC+TGG | - | chr1.2:70262768-70262787 | MS.gene60659:CDS | 50.0% | |
| TTGTCCGAGCCTTGCAACAT+TGG | - | chr1.2:70261345-70261364 | MS.gene60659:CDS | 50.0% | |
| TTTGTGCTTGCTCGGTCCAT+TGG | + | chr1.2:70261115-70261134 | None:intergenic | 50.0% | |
| ! | ACATCTTCCCAAGGTGCTTC+TGG | + | chr1.2:70261944-70261963 | None:intergenic | 50.0% |
| ! | CTGGCCTAAGCCTGATTTGA+TGG | + | chr1.2:70260611-70260630 | None:intergenic | 50.0% |
| ! | TCAAGTCCACTCGGTGGTAA+TGG | + | chr1.2:70260054-70260073 | None:intergenic | 50.0% |
| ! | TCTGCAGTGGGTTTAGGAGA+AGG | + | chr1.2:70259397-70259416 | None:intergenic | 50.0% |
| !! | ATGGTGATGGTTCTTCGCGT+TGG | + | chr1.2:70259484-70259503 | None:intergenic | 50.0% |
| !! | GTCAAGTCTAACGGACTGTG+TGG | + | chr1.2:70262424-70262443 | None:intergenic | 50.0% |
| !! | TATTCGAGTTGACCCCAGCA+AGG | - | chr1.2:70260944-70260963 | MS.gene60659:intron | 50.0% |
| AAAACGAAGCGAGCCCGTGA+TGG | - | chr1.2:70258971-70258990 | MS.gene60659:CDS | 55.0% | |
| AGCCCTTCCCAACTTTGACC+AGG | - | chr1.2:70261181-70261200 | MS.gene60659:intron | 55.0% | |
| CAGCAGTGGTGCAACGAGTA+TGG | + | chr1.2:70259696-70259715 | None:intergenic | 55.0% | |
| CATACTCGTTGCACCACTGC+TGG | - | chr1.2:70259694-70259713 | MS.gene60659:intron | 55.0% | |
| CTTGAGCTGACATCGCGTGT+AGG | + | chr1.2:70259645-70259664 | None:intergenic | 55.0% | |
| GACGAGTTCTGTTCAACCCG+GGG | - | chr1.2:70262816-70262835 | MS.gene60659:CDS | 55.0% | |
| GCTAGTCATCCCCAGACAGA+TGG | - | chr1.2:70262232-70262251 | MS.gene60659:intron | 55.0% | |
| GCTGAGACACCATAGGTTCC+TGG | + | chr1.2:70262736-70262755 | None:intergenic | 55.0% | |
| GGACGAGTTCTGTTCAACCC+GGG | - | chr1.2:70262815-70262834 | MS.gene60659:CDS | 55.0% | |
| GGCGCGGTTCTATGTCAAGA+AGG | - | chr1.2:70261242-70261261 | MS.gene60659:intron | 55.0% | |
| GGCTTAGGCCAGGAGATGAA+TGG | - | chr1.2:70260619-70260638 | MS.gene60659:intron | 55.0% | |
| TCAATCGCAGACATGCCGCT+TGG | - | chr1.2:70261447-70261466 | MS.gene60659:intron | 55.0% | |
| TGCTGATCATGGCGAGTCTC+TGG | - | chr1.2:70259606-70259625 | MS.gene60659:intron | 55.0% | |
| ! | AAGTTGGGAAGGGCTAGCAC+TGG | + | chr1.2:70261176-70261195 | None:intergenic | 55.0% |
| ! | GCCCATGATGGAGGATTAGC+AGG | - | chr1.2:70261761-70261780 | MS.gene60659:intron | 55.0% |
| !! | CCCAAGGTGCTTCTGGAACA+GGG | + | chr1.2:70261937-70261956 | None:intergenic | 55.0% |
| !! | CCCTGTTCCAGAAGCACCTT+GGG | - | chr1.2:70261934-70261953 | MS.gene60659:intron | 55.0% |
| !! | GCTTCACGTAGAGAGCACTG+AGG | + | chr1.2:70261728-70261747 | None:intergenic | 55.0% |
| !! | TCCCAAGGTGCTTCTGGAAC+AGG | + | chr1.2:70261938-70261957 | None:intergenic | 55.0% |
| !! | TCCCTGTTCCAGAAGCACCT+TGG | - | chr1.2:70261933-70261952 | MS.gene60659:intron | 55.0% |
| ACCTCGGACTCAACGCCAGA+AGG | - | chr1.2:70261988-70262007 | MS.gene60659:intron | 60.0% | |
| CGTATCGCCAGGGTCTTCCA+AGG | + | chr1.2:70259957-70259976 | None:intergenic | 60.0% | |
| GCACGACGATCGTATCGCCA+GGG | + | chr1.2:70259967-70259986 | None:intergenic | 60.0% | |
| ! | CGCATTGGCGGCAATCCTTG+TGG | + | chr1.2:70260261-70260280 | None:intergenic | 60.0% |
| ! | TCCTTCTGGCGTTGAGTCCG+AGG | + | chr1.2:70261992-70262011 | None:intergenic | 60.0% |
| !! | GGTGCTTCTGGAACAGGGAG+TGG | + | chr1.2:70261932-70261951 | None:intergenic | 60.0% |
| GGCACGACGATCGTATCGCC+AGG | + | chr1.2:70259968-70259987 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 70258593 | 70263042 | 70258593 | ID=MS.gene60659 |
| chr1.2 | mRNA | 70258593 | 70263042 | 70258593 | ID=MS.gene60659.t1;Parent=MS.gene60659 |
| chr1.2 | exon | 70262280 | 70263042 | 70262280 | ID=MS.gene60659.t1.exon1;Parent=MS.gene60659.t1 |
| chr1.2 | CDS | 70262280 | 70263042 | 70262280 | ID=cds.MS.gene60659.t1;Parent=MS.gene60659.t1 |
| chr1.2 | exon | 70261260 | 70261454 | 70261260 | ID=MS.gene60659.t1.exon2;Parent=MS.gene60659.t1 |
| chr1.2 | CDS | 70261260 | 70261454 | 70261260 | ID=cds.MS.gene60659.t1;Parent=MS.gene60659.t1 |
| chr1.2 | exon | 70259853 | 70260545 | 70259853 | ID=MS.gene60659.t1.exon3;Parent=MS.gene60659.t1 |
| chr1.2 | CDS | 70259853 | 70260545 | 70259853 | ID=cds.MS.gene60659.t1;Parent=MS.gene60659.t1 |
| chr1.2 | exon | 70258912 | 70259288 | 70258912 | ID=MS.gene60659.t1.exon4;Parent=MS.gene60659.t1 |
| chr1.2 | CDS | 70258912 | 70259288 | 70258912 | ID=cds.MS.gene60659.t1;Parent=MS.gene60659.t1 |
| chr1.2 | exon | 70258593 | 70258607 | 70258593 | ID=MS.gene60659.t1.exon5;Parent=MS.gene60659.t1 |
| chr1.2 | CDS | 70258593 | 70258607 | 70258593 | ID=cds.MS.gene60659.t1;Parent=MS.gene60659.t1 |
| Gene Sequence |
| Protein sequence |
