AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60696

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60696.t1 MTR_1g098460 94.068 354 17 3 1 351 1 353 4.23e-155 440
MS.gene60696.t1 MTR_6g037610 55.144 243 83 6 129 355 171 403 1.11e-43 155
MS.gene60696.t1 MTR_7g020980 43.827 162 63 4 109 259 11 155 1.85e-34 125
MS.gene60696.t1 MTR_3g095190 49.721 179 65 4 83 237 106 283 1.10e-33 128
MS.gene60696.t1 MTR_8g092460 75.342 73 18 0 125 197 132 204 1.28e-33 127
MS.gene60696.t1 MTR_7g021010 62.222 90 33 1 108 197 22 110 2.31e-32 119
MS.gene60696.t1 MTR_7g021010 75.385 65 16 0 133 197 7 71 5.28e-30 112
MS.gene60696.t1 MTR_4g086165 78.689 61 13 0 134 194 78 138 1.25e-28 110
MS.gene60696.t1 MTR_2g105380 57.407 108 38 3 111 210 83 190 1.66e-28 114
MS.gene60696.t1 MTR_4g086160 46.512 129 63 2 138 261 96 223 1.77e-28 111
MS.gene60696.t1 MTR_8g022820 49.558 113 55 2 133 243 119 231 2.36e-28 114
MS.gene60696.t1 MTR_8g022820 49.558 113 55 2 133 243 119 231 2.36e-28 114
MS.gene60696.t1 MTR_8g022820 49.558 113 55 2 133 243 118 230 2.44e-28 114
MS.gene60696.t1 MTR_4g086190 84.211 57 9 0 138 194 96 152 5.41e-28 109
MS.gene60696.t1 MTR_4g086220 84.211 57 9 0 138 194 96 152 6.17e-28 109
MS.gene60696.t1 MTR_2g435590 43.038 158 70 3 60 202 8 160 6.21e-28 110
MS.gene60696.t1 MTR_3g098580 61.818 110 32 2 98 197 26 135 8.30e-27 107
MS.gene60696.t1 MTR_1g087920 50.000 98 38 1 133 230 72 158 1.83e-26 107
MS.gene60696.t1 MTR_8g006825 56.818 88 36 2 136 222 94 180 5.37e-25 101
MS.gene60696.t1 MTR_2g078680 75.862 58 14 0 137 194 30 87 1.64e-24 99.8
MS.gene60696.t1 MTR_5g085100 55.056 89 39 1 107 194 14 102 2.17e-24 101
MS.gene60696.t1 MTR_4g100380 72.059 68 18 1 136 202 143 210 8.42e-24 99.4
MS.gene60696.t1 MTR_1g028560 44.737 114 51 3 136 244 113 219 1.31e-23 100
MS.gene60696.t1 MTR_4g088005 44.954 109 56 2 95 199 11 119 2.33e-23 94.0
MS.gene60696.t1 MTR_2g014340 58.025 81 31 1 125 202 6 86 3.01e-23 96.3
MS.gene60696.t1 MTR_8g006815 69.355 62 18 1 137 197 95 156 3.10e-23 96.3
MS.gene60696.t1 MTR_8g006840 66.176 68 22 1 131 197 118 185 3.27e-23 95.9
MS.gene60696.t1 MTR_3g053690 72.581 62 17 0 137 198 26 87 3.28e-23 96.7
MS.gene60696.t1 MTR_4g078710 54.118 85 34 1 110 194 5 84 4.45e-23 96.3
MS.gene60696.t1 MTR_4g100420 68.657 67 20 1 135 200 154 220 5.53e-23 97.8
MS.gene60696.t1 MTR_1g074310 66.176 68 22 1 128 194 11 78 7.77e-23 93.6
MS.gene60696.t1 MTR_4g100450 69.231 65 19 1 134 197 150 214 8.40e-23 97.4
MS.gene60696.t1 MTR_2g015050 54.082 98 35 4 113 200 101 198 1.30e-22 96.3
MS.gene60696.t1 MTR_5g009620 38.462 156 69 4 136 264 110 265 1.70e-22 96.7
MS.gene60696.t1 MTR_5g085070 70.690 58 17 0 137 194 50 107 2.40e-22 95.9
MS.gene60696.t1 MTR_1g048610 63.235 68 24 1 131 197 82 149 3.25e-22 94.0
MS.gene60696.t1 MTR_6g033255 50.345 145 61 4 117 258 1 137 3.37e-22 93.6
MS.gene60696.t1 MTR_2g015040 65.672 67 21 2 135 199 60 126 3.46e-22 92.0
MS.gene60696.t1 MTR_2g438180 67.692 65 20 1 132 195 8 72 3.47e-22 91.3
MS.gene60696.t1 MTR_7g081815 66.667 63 20 1 136 197 59 121 4.62e-22 93.2
MS.gene60696.t1 MTR_2g089170 64.179 67 23 1 135 201 62 127 6.92e-22 92.0
MS.gene60696.t1 MTR_7g081805 66.667 63 20 1 136 197 59 121 7.60e-22 92.4
MS.gene60696.t1 MTR_7g081795 66.667 63 20 1 136 197 58 120 7.96e-22 92.4
MS.gene60696.t1 MTR_1g070070 61.333 75 28 1 121 194 4 78 8.86e-22 90.5
MS.gene60696.t1 MTR_4g054740 44.094 127 68 2 72 197 33 157 1.19e-21 92.8
MS.gene60696.t1 MTR_3g090760 59.420 69 23 1 136 199 111 179 1.33e-21 94.7
MS.gene60696.t1 MTR_4g054360 69.841 63 18 1 136 197 122 184 1.73e-21 92.8
MS.gene60696.t1 MTR_1g090290 54.217 83 37 1 113 194 88 170 2.17e-21 90.9
MS.gene60696.t1 MTR_3g106290 68.333 60 19 0 137 196 7 66 2.25e-21 90.9
MS.gene60696.t1 MTR_4g008860 64.516 62 22 0 135 196 5 66 4.20e-21 90.1
MS.gene60696.t1 MTR_1g090170 50.526 95 46 1 122 216 136 229 4.45e-21 92.8
MS.gene60696.t1 MTR_2g103700 64.516 62 22 0 136 197 5 66 5.13e-21 89.4
MS.gene60696.t1 MTR_1g090170 50.526 95 46 1 122 216 223 316 7.27e-21 93.2
MS.gene60696.t1 MTR_5g062700 67.797 59 19 0 136 194 171 229 8.16e-21 92.8
MS.gene60696.t1 MTR_8g099215 53.659 82 36 1 136 217 105 184 8.75e-21 92.0
MS.gene60696.t1 MTR_6g088405 65.517 58 20 0 138 195 44 101 8.84e-21 89.7
MS.gene60696.t1 MTR_3g074130 66.102 59 20 0 136 194 148 206 1.28e-20 92.0
MS.gene60696.t1 MTR_8g069360 70.175 57 17 0 137 193 43 99 1.41e-20 92.8
MS.gene60696.t1 MTR_8g102800 67.241 58 19 0 138 195 37 94 2.01e-20 89.4
MS.gene60696.t1 MTR_4g010640 66.102 59 20 0 136 194 5 63 2.19e-20 88.6
MS.gene60696.t1 MTR_4g114570 51.220 82 38 1 136 217 5 84 2.29e-20 88.6
MS.gene60696.t1 MTR_7g096810 49.000 100 50 1 137 235 12 111 2.48e-20 86.3
MS.gene60696.t1 MTR_3g102100 43.478 92 51 1 105 195 11 102 3.04e-20 87.0
MS.gene60696.t1 MTR_4g054860 65.625 64 21 1 135 197 128 191 3.45e-20 89.7
MS.gene60696.t1 MTR_2g014300 64.062 64 23 0 131 194 8 71 4.69e-20 86.7
MS.gene60696.t1 MTR_3g110205 65.517 58 20 0 138 195 43 100 5.61e-20 87.0
MS.gene60696.t1 MTR_7g096700 67.742 62 19 1 134 194 16 77 5.92e-20 85.5
MS.gene60696.t1 MTR_8g090350 64.407 59 21 0 136 194 111 169 6.07e-20 89.0
MS.gene60696.t1 MTR_5g082950 68.421 57 18 0 137 193 65 121 7.97e-20 89.4
MS.gene60696.t1 MTR_7g046260 55.405 74 30 1 138 208 61 134 9.84e-20 87.4
MS.gene60696.t1 MTR_7g117690 46.753 77 41 0 121 197 11 87 1.07e-19 85.5
MS.gene60696.t1 MTR_2g101340 62.069 58 22 0 138 195 41 98 1.09e-19 86.7
MS.gene60696.t1 MTR_1g074230 67.797 59 18 1 137 194 18 76 1.26e-19 84.3
MS.gene60696.t1 MTR_7g096750 70.000 60 17 1 137 195 19 78 1.27e-19 84.3
MS.gene60696.t1 MTR_2g090235 63.333 60 22 0 136 195 216 275 1.30e-19 89.7
MS.gene60696.t1 MTR_8g006410 55.263 76 32 1 138 213 52 125 1.30e-19 86.3
MS.gene60696.t1 MTR_5g016750 61.667 60 23 0 136 195 23 82 1.45e-19 85.5
MS.gene60696.t1 MTR_1g014800 30.899 178 111 4 105 275 1 173 1.46e-19 86.7
MS.gene60696.t1 MTR_8g085960 49.412 85 36 2 126 203 8 92 1.82e-19 86.7
MS.gene60696.t1 MTR_0939s0010 63.333 60 22 0 135 194 62 121 2.74e-19 85.1
MS.gene60696.t1 MTR_1g070000 46.000 100 53 1 95 193 41 140 3.02e-19 85.9
MS.gene60696.t1 MTR_4g100650 63.793 58 21 0 138 195 74 131 3.33e-19 86.3
MS.gene60696.t1 MTR_1g069985 48.000 100 47 2 95 193 36 131 3.88e-19 85.1
MS.gene60696.t1 MTR_7g092190 68.421 57 18 0 138 194 30 86 4.41e-19 86.7
MS.gene60696.t1 MTR_4g119270 55.072 69 27 1 129 193 40 108 5.53e-19 87.0
MS.gene60696.t1 MTR_1g019110 62.069 58 22 0 138 195 44 101 5.96e-19 84.0
MS.gene60696.t1 MTR_7g011630 62.712 59 22 0 135 193 39 97 7.01e-19 87.8
MS.gene60696.t1 MTR_6g012970 62.712 59 22 0 135 193 35 93 7.12e-19 87.4
MS.gene60696.t1 MTR_5g012910 53.333 75 34 1 121 195 12 85 7.23e-19 83.6
MS.gene60696.t1 MTR_6g466130 46.392 97 44 2 123 213 45 139 1.00e-18 84.3
MS.gene60696.t1 MTR_8g013860 63.158 57 21 0 138 194 47 103 1.08e-18 83.6
MS.gene60696.t1 MTR_7g085810 56.061 66 29 0 137 202 29 94 1.57e-18 84.7
MS.gene60696.t1 MTR_5g075570 60.656 61 24 0 134 194 120 180 1.81e-18 84.7
MS.gene60696.t1 MTR_8g032610 50.633 79 37 1 117 193 4 82 1.94e-18 85.1
MS.gene60696.t1 MTR_4g035430 58.333 60 25 0 138 197 32 91 2.16e-18 83.2
MS.gene60696.t1 MTR_5g032820 66.667 57 19 0 137 193 45 101 2.23e-18 85.9
MS.gene60696.t1 MTR_1g070020 66.102 59 19 1 136 193 68 126 2.23e-18 83.2
MS.gene60696.t1 MTR_1g070015 53.947 76 34 1 119 193 65 140 2.36e-18 83.2
MS.gene60696.t1 MTR_1g014780 34.783 138 77 3 102 239 7 131 3.62e-18 82.8
MS.gene60696.t1 MTR_7g084370 66.667 57 19 0 137 193 41 97 3.79e-18 84.0
MS.gene60696.t1 MTR_1g014820 39.844 128 68 3 119 240 8 132 3.86e-18 83.6
MS.gene60696.t1 MTR_6g029180 54.286 70 32 0 133 202 28 97 4.59e-18 84.3
MS.gene60696.t1 MTR_8g027465 53.030 66 31 0 132 197 33 98 4.89e-18 81.3
MS.gene60696.t1 MTR_5g083340 62.712 59 22 0 137 195 84 142 5.41e-18 85.1
MS.gene60696.t1 MTR_1g014860 35.833 120 69 2 123 242 7 118 5.90e-18 82.0
MS.gene60696.t1 MTR_1g074250 63.333 60 20 1 137 194 18 77 8.78e-18 79.3
MS.gene60696.t1 MTR_1g069960 68.750 64 19 1 137 199 26 89 1.28e-17 79.3
MS.gene60696.t1 MTR_2g019750 52.000 75 28 1 127 193 31 105 1.36e-17 82.4
MS.gene60696.t1 MTR_1g070035 61.667 60 22 1 135 193 74 133 1.83e-17 80.9
MS.gene60696.t1 MTR_6g465690 43.299 97 47 2 123 213 42 136 4.40e-17 80.5
MS.gene60696.t1 MTR_1g070045 55.263 76 32 2 119 193 48 122 4.63e-17 78.2
MS.gene60696.t1 MTR_2g043050 54.098 61 28 0 138 198 19 79 6.65e-17 79.0
MS.gene60696.t1 MTR_6g466020 51.351 74 34 1 138 211 43 114 7.02e-17 78.2
MS.gene60696.t1 MTR_1g101600 55.882 68 25 1 138 200 41 108 7.75e-17 78.6
MS.gene60696.t1 MTR_5g083330 56.452 62 27 0 134 195 31 92 8.40e-17 80.5
MS.gene60696.t1 MTR_6g465510 58.333 60 25 0 138 197 33 92 9.43e-17 78.6
MS.gene60696.t1 MTR_2g043030 47.368 76 37 1 126 198 4 79 9.92e-17 78.2
MS.gene60696.t1 MTR_6g088425 48.624 109 38 3 124 216 19 125 1.12e-16 79.0
MS.gene60696.t1 MTR_6g466000 40.367 109 57 2 114 216 27 133 1.21e-16 78.6
MS.gene60696.t1 MTR_4g111915 57.627 59 25 0 136 194 51 109 1.25e-16 76.3
MS.gene60696.t1 MTR_4g112490 56.667 60 26 0 135 194 50 109 1.64e-16 77.8
MS.gene60696.t1 MTR_6g465460 49.367 79 38 1 138 216 54 130 1.74e-16 79.0
MS.gene60696.t1 MTR_4g082345 59.322 59 24 0 135 193 45 103 2.12e-16 79.3
MS.gene60696.t1 MTR_6g465430 48.101 79 39 1 138 216 54 130 2.28e-16 78.2
MS.gene60696.t1 MTR_1g040430 49.541 109 50 3 90 194 61 168 2.39e-16 77.0
MS.gene60696.t1 MTR_6g465530 48.101 79 39 1 138 216 33 109 2.56e-16 77.0
MS.gene60696.t1 MTR_6g465850 53.521 71 28 1 138 203 63 133 3.38e-16 78.2
MS.gene60696.t1 MTR_5g008590 54.321 81 35 2 138 218 11 89 3.39e-16 76.3
MS.gene60696.t1 MTR_2g016730 59.649 57 23 0 137 193 22 78 3.95e-16 79.0
MS.gene60696.t1 MTR_1g069940 67.188 64 20 1 135 197 92 155 4.21e-16 77.4
MS.gene60696.t1 MTR_3g105510 37.755 98 50 2 136 233 35 121 4.95e-16 77.0
MS.gene60696.t1 MTR_1g097190 53.125 64 29 1 131 193 16 79 8.40e-16 73.9
MS.gene60696.t1 MTR_8g023680 45.122 82 44 1 104 184 81 162 9.90e-16 77.8
MS.gene60696.t1 MTR_6g465450 55.000 60 27 0 138 197 54 113 1.17e-15 76.3
MS.gene60696.t1 MTR_1g069945 68.750 64 19 1 135 197 98 161 1.21e-15 76.3
MS.gene60696.t1 MTR_7g096830 66.154 65 21 1 134 197 94 158 1.86e-15 75.5
MS.gene60696.t1 MTR_2g043040 50.820 61 30 0 138 198 19 79 2.08e-15 75.1
MS.gene60696.t1 MTR_1g023170 65.517 58 20 0 138 195 40 97 2.53e-15 75.5
MS.gene60696.t1 MTR_7g096780 64.706 68 23 1 131 197 78 145 2.55e-15 75.1
MS.gene60696.t1 MTR_6g465420 46.835 79 40 1 138 216 54 130 3.53e-15 75.1
MS.gene60696.t1 MTR_1g012470 47.748 111 51 4 134 240 3 110 4.04e-15 73.6
MS.gene60696.t1 MTR_3g112440 67.241 58 19 0 138 195 39 96 4.36e-15 73.9
MS.gene60696.t1 MTR_7g028925 43.333 90 47 2 111 200 2 87 4.88e-15 70.5
MS.gene60696.t1 MTR_3g017420 58.824 51 21 0 145 195 2 52 5.21e-15 69.7
MS.gene60696.t1 MTR_8g023700 62.963 54 16 1 135 184 110 163 6.20e-15 75.5
MS.gene60696.t1 MTR_2g043020 44.737 76 39 1 126 198 4 79 7.67e-15 72.8
MS.gene60696.t1 MTR_7g070220 58.730 63 19 1 138 193 78 140 1.07e-14 75.5
MS.gene60696.t1 MTR_1g110970 52.459 61 25 1 137 193 96 156 1.18e-14 74.7
MS.gene60696.t1 MTR_1g105400 43.750 80 41 1 137 212 114 193 1.29e-14 74.7
MS.gene60696.t1 MTR_1g043350 47.273 110 39 4 95 193 37 138 1.66e-14 72.4
MS.gene60696.t1 MTR_1g006660 66.667 57 19 0 138 194 47 103 1.91e-14 72.8
MS.gene60696.t1 MTR_5g008540 50.000 58 29 0 140 197 26 83 2.06e-14 68.9
MS.gene60696.t1 MTR_5g085125 56.897 58 25 0 137 194 15 72 2.22e-14 70.9
MS.gene60696.t1 MTR_4g102670 46.914 81 40 2 133 213 10 87 2.59e-14 70.5
MS.gene60696.t1 MTR_3g105480 38.298 94 47 2 140 233 33 115 4.61e-14 71.2
MS.gene60696.t1 MTR_5g008470 51.724 58 28 0 140 197 77 134 4.81e-14 70.1
MS.gene60696.t1 MTR_3g107380 66.102 59 20 0 136 194 6 64 1.52e-13 69.3
MS.gene60696.t1 MTR_1g074370 44.340 106 56 3 95 197 28 133 2.10e-13 68.9
MS.gene60696.t1 MTR_5g008790 50.000 62 29 1 136 195 16 77 7.45e-13 66.2
MS.gene60696.t1 MTR_2g085015 43.617 94 38 4 134 212 43 136 9.72e-13 67.4
MS.gene60696.t1 MTR_5g057810 68.293 41 13 0 137 177 87 127 1.73e-12 67.8
MS.gene60696.t1 MTR_5g057647 68.293 41 13 0 137 177 87 127 1.73e-12 67.8
MS.gene60696.t1 MTR_5g009410 55.000 80 36 0 134 213 113 192 2.72e-12 67.4
MS.gene60696.t1 MTR_5g008550 43.210 81 44 1 138 218 21 99 8.75e-12 63.9
MS.gene60696.t1 MTR_5g010940 28.713 202 112 7 106 286 14 204 1.00e-11 64.3
MS.gene60696.t1 MTR_5g010930 42.353 85 41 2 138 216 49 131 1.05e-11 64.3
MS.gene60696.t1 MTR_5g010910 41.176 85 42 2 138 216 49 131 1.57e-11 63.9
MS.gene60696.t1 MTR_1g093600 55.357 56 23 1 137 192 63 116 2.12e-11 65.1
MS.gene60696.t1 MTR_4g009260 46.535 101 49 2 103 203 45 140 3.70e-11 62.4
MS.gene60696.t1 MTR_5g058470 52.308 65 30 1 131 194 89 153 4.55e-11 63.5
MS.gene60696.t1 MTR_3g072610 44.444 81 43 1 135 213 22 102 4.82e-11 62.4
MS.gene60696.t1 MTR_5g053920 51.724 58 26 1 137 194 65 120 5.74e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60696.t1 AT5G61890 50.331 151 56 4 98 243 51 187 1.71e-35 130
MS.gene60696.t1 AT2G33710 70.130 77 23 0 121 197 53 129 5.12e-33 122
MS.gene60696.t1 AT2G33710 70.130 77 23 0 121 197 53 129 7.22e-33 122
MS.gene60696.t1 AT5G13330 71.951 82 18 1 134 215 35 111 1.33e-32 121
MS.gene60696.t1 AT5G50080 52.778 144 47 3 121 264 60 182 3.53e-30 115
MS.gene60696.t1 AT5G50080 52.778 144 47 3 121 264 69 191 3.58e-30 115
MS.gene60696.t1 AT2G47520 68.056 72 21 1 125 194 35 106 2.74e-29 111
MS.gene60696.t1 AT3G16770 60.465 86 31 1 113 195 51 136 2.09e-28 111
MS.gene60696.t1 AT5G64750 86.207 58 8 0 145 202 192 249 2.53e-28 114
MS.gene60696.t1 AT1G43160 54.918 122 49 1 133 248 56 177 3.99e-28 108
MS.gene60696.t1 AT5G07310 70.115 87 20 2 134 220 88 168 3.26e-27 108
MS.gene60696.t1 AT3G15210 50.000 118 45 3 124 227 11 128 8.62e-27 106
MS.gene60696.t1 AT5G47220 68.919 74 22 1 130 202 109 182 4.01e-25 102
MS.gene60696.t1 AT1G03800 52.688 93 40 1 102 194 21 109 5.51e-25 102
MS.gene60696.t1 AT1G72360 66.667 66 22 0 137 202 24 89 6.20e-25 101
MS.gene60696.t1 AT4G17500 56.989 93 39 1 111 202 121 213 8.38e-25 102
MS.gene60696.t1 AT5G47230 61.628 86 28 2 122 202 136 221 1.15e-24 102
MS.gene60696.t1 AT1G72360 66.667 66 22 0 137 202 75 140 1.19e-24 101
MS.gene60696.t1 AT1G72360 66.667 66 22 0 137 202 73 138 1.25e-24 101
MS.gene60696.t1 AT4G11140 60.759 79 30 1 136 214 85 162 4.06e-24 100
MS.gene60696.t1 AT1G28370 64.384 73 22 1 122 194 46 114 4.84e-24 98.6
MS.gene60696.t1 AT1G28370 64.384 73 22 1 122 194 8 76 6.03e-24 97.1
MS.gene60696.t1 AT2G22200 55.000 80 36 0 131 210 64 143 3.64e-23 97.4
MS.gene60696.t1 AT5G44210 73.684 57 15 0 138 194 33 89 4.24e-23 95.9
MS.gene60696.t1 AT4G27950 34.857 175 97 4 33 193 2 173 5.24e-23 98.6
MS.gene60696.t1 AT5G51190 52.083 96 43 2 102 194 34 129 8.96e-23 95.5
MS.gene60696.t1 AT1G71450 55.556 81 34 2 138 218 24 102 1.26e-22 94.0
MS.gene60696.t1 AT2G44840 47.368 114 56 2 85 197 42 152 1.35e-22 95.1
MS.gene60696.t1 AT4G17490 67.164 67 21 1 132 197 131 197 1.46e-22 96.3
MS.gene60696.t1 AT5G61600 62.319 69 25 1 136 203 86 154 3.44e-22 94.4
MS.gene60696.t1 AT5G07580 48.598 107 49 3 113 218 88 189 5.41e-22 92.8
MS.gene60696.t1 AT5G53290 56.471 85 35 1 111 193 96 180 5.88e-22 95.9
MS.gene60696.t1 AT3G57600 63.235 68 25 0 137 204 27 94 8.23e-22 94.0
MS.gene60696.t1 AT4G06746 61.290 62 24 0 136 197 34 95 8.84e-22 90.9
MS.gene60696.t1 AT3G23230 72.881 59 15 1 137 194 19 77 1.40e-21 89.7
MS.gene60696.t1 AT1G50640 72.414 58 16 0 137 194 27 84 1.49e-21 92.4
MS.gene60696.t1 AT5G65130 64.516 62 22 0 136 197 109 170 1.50e-21 93.6
MS.gene60696.t1 AT5G65130 64.516 62 22 0 136 197 111 172 1.63e-21 93.2
MS.gene60696.t1 AT3G61630 46.226 106 51 2 88 193 61 160 1.99e-21 94.0
MS.gene60696.t1 AT1G15360 65.574 61 21 0 136 196 5 65 2.00e-21 91.3
MS.gene60696.t1 AT1G15360 65.574 61 21 0 136 196 5 65 2.00e-21 91.3
MS.gene60696.t1 AT3G20310 62.319 69 26 0 137 205 26 94 2.02e-21 92.4
MS.gene60696.t1 AT1G22190 65.000 60 21 0 136 195 81 140 2.97e-21 92.4
MS.gene60696.t1 AT4G28140 52.439 82 39 0 136 217 141 222 3.40e-21 92.8
MS.gene60696.t1 AT4G16750 51.282 78 38 0 118 195 20 97 4.54e-21 89.7
MS.gene60696.t1 AT5G25190 53.659 82 37 1 137 218 7 87 5.06e-21 89.7
MS.gene60696.t1 AT3G50260 57.353 68 29 0 133 200 16 83 6.88e-21 88.6
MS.gene60696.t1 AT4G23750 55.952 84 31 2 110 193 100 177 7.14e-21 92.8
MS.gene60696.t1 AT4G23750 55.952 84 31 2 110 193 100 177 7.14e-21 92.8
MS.gene60696.t1 AT1G36060 66.102 59 20 0 136 194 141 199 7.56e-21 92.0
MS.gene60696.t1 AT1G28360 65.625 64 22 0 131 194 5 68 8.35e-21 89.4
MS.gene60696.t1 AT4G39780 63.934 61 22 0 135 195 90 150 9.36e-21 91.3
MS.gene60696.t1 AT4G36900 50.588 85 42 0 111 195 3 87 9.40e-21 89.4
MS.gene60696.t1 AT5G43410 71.186 59 16 1 137 194 14 72 1.53e-20 86.7
MS.gene60696.t1 AT1G78080 66.102 59 20 0 136 194 150 208 1.54e-20 91.7
MS.gene60696.t1 AT4G32800 53.333 75 33 1 123 195 2 76 1.56e-20 89.4
MS.gene60696.t1 AT5G67190 56.338 71 31 0 131 201 14 84 1.57e-20 88.2
MS.gene60696.t1 AT2G35700 65.517 58 20 0 138 195 45 102 2.30e-20 88.2
MS.gene60696.t1 AT4G13620 68.333 60 19 0 136 195 230 289 2.34e-20 91.7
MS.gene60696.t1 AT3G60490 50.000 84 30 1 124 195 45 128 3.18e-20 89.4
MS.gene60696.t1 AT2G20880 65.000 60 21 0 136 195 185 244 3.18e-20 90.9
MS.gene60696.t1 AT4G34410 84.211 57 9 0 138 194 136 192 3.27e-20 89.4
MS.gene60696.t1 AT2G31230 53.012 83 37 2 117 197 64 146 5.73e-20 88.2
MS.gene60696.t1 AT1G12980 48.624 109 54 1 106 212 25 133 5.99e-20 89.7
MS.gene60696.t1 AT5G11590 46.154 91 49 0 105 195 18 108 6.01e-20 88.2
MS.gene60696.t1 AT3G16280 65.517 58 20 0 138 195 61 118 7.41e-20 87.8
MS.gene60696.t1 AT3G16280 65.517 58 20 0 138 195 79 136 1.00e-19 87.8
MS.gene60696.t1 AT1G19210 54.688 64 29 0 137 200 11 74 1.05e-19 86.3
MS.gene60696.t1 AT2G46310 66.667 57 19 0 137 193 98 154 1.06e-19 88.6
MS.gene60696.t1 AT5G25390 62.712 59 22 0 136 194 5 63 1.14e-19 86.3
MS.gene60696.t1 AT5G19790 52.564 78 33 1 125 198 5 82 1.76e-19 87.0
MS.gene60696.t1 AT2G23340 62.069 58 22 0 138 195 28 85 1.77e-19 85.1
MS.gene60696.t1 AT4G25470 51.899 79 36 1 138 216 51 127 2.23e-19 85.9
MS.gene60696.t1 AT2G44940 59.375 64 26 0 132 195 94 157 2.40e-19 87.4
MS.gene60696.t1 AT1G75490 49.412 85 35 2 138 222 42 118 2.94e-19 85.5
MS.gene60696.t1 AT1G01250 45.455 88 46 1 110 197 19 104 3.81e-19 84.7
MS.gene60696.t1 AT3G11020 65.000 60 21 0 138 197 78 137 3.84e-19 87.4
MS.gene60696.t1 AT4G25490 53.947 76 33 1 138 213 48 121 3.90e-19 85.1
MS.gene60696.t1 AT5G25810 46.739 92 43 1 110 195 2 93 5.32e-19 85.1
MS.gene60696.t1 AT5G13910 53.521 71 33 0 123 193 5 75 6.11e-19 84.7
MS.gene60696.t1 AT1G46768 59.016 61 25 0 135 195 28 88 6.26e-19 83.2
MS.gene60696.t1 AT1G46768 59.016 61 25 0 135 195 28 88 6.26e-19 83.2
MS.gene60696.t1 AT1G46768 59.016 61 25 0 135 195 28 88 7.15e-19 82.4
MS.gene60696.t1 AT4G25480 52.632 76 34 1 138 213 51 124 7.39e-19 84.7
MS.gene60696.t1 AT1G74930 41.237 97 42 1 137 233 20 101 7.56e-19 84.0
MS.gene60696.t1 AT2G40340 53.247 77 36 0 138 214 14 90 1.44e-18 85.1
MS.gene60696.t1 AT2G40340 53.247 77 36 0 138 214 14 90 1.44e-18 85.1
MS.gene60696.t1 AT2G40340 53.247 77 36 0 138 214 14 90 1.44e-18 85.1
MS.gene60696.t1 AT4G18450 64.516 62 20 2 134 193 106 167 1.88e-18 85.1
MS.gene60696.t1 AT3G14230 42.384 151 76 4 72 214 58 205 2.01e-18 85.9
MS.gene60696.t1 AT3G23240 68.421 57 17 1 138 193 82 138 2.46e-18 83.2
MS.gene60696.t1 AT1G21910 59.649 57 23 0 138 194 50 106 2.82e-18 83.2
MS.gene60696.t1 AT3G14230 40.940 149 80 3 72 214 58 204 2.89e-18 85.5
MS.gene60696.t1 AT5G51990 44.144 111 50 3 116 216 22 130 3.30e-18 82.8
MS.gene60696.t1 AT2G36450 52.381 84 35 2 129 211 6 85 4.17e-18 81.6
MS.gene60696.t1 AT1G24590 61.905 63 24 0 137 199 57 119 4.25e-18 84.3
MS.gene60696.t1 AT3G14230 52.941 102 43 1 118 214 108 209 4.31e-18 85.1
MS.gene60696.t1 AT1G53910 55.882 102 40 3 129 225 114 215 4.35e-18 84.7
MS.gene60696.t1 AT1G53910 55.882 102 40 3 129 225 114 215 4.35e-18 84.7
MS.gene60696.t1 AT1G53910 55.882 102 40 3 129 225 112 213 4.44e-18 84.7
MS.gene60696.t1 AT5G18450 62.500 56 21 0 138 193 34 89 4.47e-18 84.3
MS.gene60696.t1 AT5G05410 63.333 60 22 0 135 194 76 135 4.58e-18 84.0
MS.gene60696.t1 AT5G21960 42.553 94 51 1 137 227 6 99 4.93e-18 82.4
MS.gene60696.t1 AT2G40340 53.247 77 36 0 138 214 79 155 5.08e-18 84.7
MS.gene60696.t1 AT2G40340 53.247 77 36 0 138 214 72 148 5.28e-18 84.0
MS.gene60696.t1 AT2G40340 53.247 77 36 0 138 214 72 148 5.43e-18 84.3
MS.gene60696.t1 AT5G05410 63.333 60 22 0 135 194 76 135 5.85e-18 84.3
MS.gene60696.t1 AT5G18560 50.575 87 34 1 116 193 24 110 8.51e-18 84.0
MS.gene60696.t1 AT1G53170 50.980 102 46 1 126 227 19 116 8.57e-18 80.9
MS.gene60696.t1 AT5G25390 61.017 59 20 1 136 194 5 60 1.29e-17 80.5
MS.gene60696.t1 AT1G68550 47.312 93 40 2 135 227 110 193 1.10e-16 80.5
MS.gene60696.t1 AT1G68550 47.312 93 40 2 135 227 110 193 1.10e-16 80.5
MS.gene60696.t1 AT4G31060 47.143 70 34 1 136 205 25 91 1.88e-16 77.0
MS.gene60696.t1 AT1G22985 54.054 74 31 1 123 193 60 133 2.64e-16 75.9
MS.gene60696.t1 AT1G28160 61.404 57 22 0 137 193 38 94 3.05e-16 77.8
MS.gene60696.t1 AT1G12890 51.316 76 35 1 128 201 11 86 5.44e-16 76.6
MS.gene60696.t1 AT5G61590 57.143 91 36 2 107 194 74 164 9.43e-16 75.5
MS.gene60696.t1 AT2G40350 57.895 57 24 0 138 194 74 130 1.34e-15 74.3
MS.gene60696.t1 AT2G40350 57.895 57 24 0 138 194 67 123 1.46e-15 73.9
MS.gene60696.t1 AT5G67000 53.333 60 28 0 133 192 116 175 1.51e-15 74.3
MS.gene60696.t1 AT1G71130 53.623 69 27 1 130 193 71 139 2.60e-15 73.2
MS.gene60696.t1 AT3G23220 72.881 59 15 1 137 194 13 71 4.20e-15 72.0
MS.gene60696.t1 AT1G77200 65.517 58 20 0 138 195 43 100 4.46e-15 74.3
MS.gene60696.t1 AT1G22810 43.333 90 46 2 129 216 5 91 7.92e-15 71.2
MS.gene60696.t1 AT5G11190 69.492 59 18 0 136 194 5 63 8.10e-15 72.4
MS.gene60696.t1 AT1G06160 68.852 61 18 1 138 197 82 142 1.40e-14 73.2
MS.gene60696.t1 AT1G63030 48.684 76 37 1 138 213 30 103 1.45e-14 71.6
MS.gene60696.t1 AT1G63030 48.684 76 37 1 138 213 30 103 1.45e-14 71.6
MS.gene60696.t1 AT1G33760 57.333 75 28 1 138 212 20 90 2.22e-14 71.2
MS.gene60696.t1 AT1G04370 71.186 59 16 1 137 194 19 77 2.97e-14 69.3
MS.gene60696.t1 AT2G40220 67.797 59 19 0 135 193 52 110 5.04e-14 72.8
MS.gene60696.t1 AT2G25820 36.000 175 65 4 138 305 26 160 1.17e-13 70.1
MS.gene60696.t1 AT2G38340 56.164 73 24 2 137 201 69 141 1.38e-13 70.1
MS.gene60696.t1 AT1G12610 51.724 58 28 0 138 195 30 87 3.17e-13 68.6
MS.gene60696.t1 AT1G77640 46.429 84 44 1 134 217 39 121 9.13e-13 67.8
MS.gene60696.t1 AT1G64380 64.516 62 22 0 133 194 131 192 1.03e-12 68.9
MS.gene60696.t1 AT3G25890 36.697 109 53 2 90 184 71 177 2.47e-12 67.8
MS.gene60696.t1 AT3G25890 36.697 109 53 2 90 184 71 177 2.47e-12 67.8
MS.gene60696.t1 AT1G71520 50.909 55 26 1 127 180 2 56 8.09e-12 62.8
MS.gene60696.t1 AT1G68840 54.386 57 24 1 137 193 64 118 1.68e-11 65.1
MS.gene60696.t1 AT1G68840 54.386 57 24 1 137 193 64 118 1.68e-11 65.1
MS.gene60696.t1 AT1G13260 39.394 99 51 3 104 195 21 117 2.42e-11 64.7
MS.gene60696.t1 AT1G44830 57.143 63 26 1 134 195 31 93 2.43e-11 63.2
MS.gene60696.t1 AT3G25730 35.789 95 59 1 137 231 61 153 3.03e-11 64.3
MS.gene60696.t1 AT1G49120 42.254 71 39 1 116 184 63 133 3.28e-11 64.3

Find 85 sgRNAs with CRISPR-Local

Find 137 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACTTGGACCCACTCATTT+TGG 0.138004 1.2:-70900236 None:intergenic
TTCTTCTAGTGCTGCTCTTT+TGG 0.154366 1.2:+70900335 MS.gene60696:CDS
ACCAAGTTGAAGGAGGAAAA+TGG 0.247727 1.2:-70902012 None:intergenic
GTTTCACTTCCTCTGTTTCC+TGG 0.259976 1.2:+70901920 MS.gene60696:CDS
GACAGAGACCATGGGGAAAA+TGG 0.284163 1.2:+70901426 MS.gene60696:CDS
GGAAAAGTTGGTCTTGTTGC+TGG 0.317802 1.2:-70901593 None:intergenic
TATCAGAAGGGCTTTGAAAC+TGG 0.338600 1.2:-70901703 None:intergenic
TCTCAGCTTCTGAAAGGTTC+TGG 0.359067 1.2:+70901749 MS.gene60696:CDS
CACACAAAGCAGCAAGAGTA+TGG 0.363163 1.2:+70901468 MS.gene60696:CDS
GATGAGTTTCCCTGTGAAAA+AGG 0.372591 1.2:-70900471 None:intergenic
GAAAATAACCACTTCCTTGT+TGG 0.377793 1.2:-70900257 None:intergenic
GCGGTGGTGCAGGTGAATAA+TGG 0.382224 1.2:-70901652 None:intergenic
TCTGTTTCCTGGTCAGCAAA+TGG 0.387419 1.2:+70901931 MS.gene60696:CDS
AGCGCCGACTCAGCATGGAT+TGG 0.393202 1.2:+70900206 MS.gene60696:CDS
AACCACTTCCTTGTTGGACT+TGG 0.393801 1.2:-70900251 None:intergenic
CCTTCAACTTGGTCAGATAC+TGG 0.401140 1.2:+70902022 MS.gene60696:CDS
TTCAACATCTTCTGTTTCTC+CGG 0.403707 1.2:+70901625 MS.gene60696:CDS
GGCTGCATTTGCGGTGGTGC+AGG 0.419729 1.2:-70901662 None:intergenic
GGGACAAAACCTGACATCAT+AGG 0.430327 1.2:-70900279 None:intergenic
GCGCCGACTCAGCATGGATT+GGG 0.436462 1.2:+70900207 MS.gene60696:CDS
TCACAGGGAAACTCATCATC+AGG 0.441888 1.2:+70900477 MS.gene60696:CDS
GAAGAAGGTGGAGGCGGAGG+AGG 0.445095 1.2:-70902055 None:intergenic
CGGTGGTGCAGGTGAATAAT+GGG 0.451525 1.2:-70901651 None:intergenic
ACAGAGACCATGGGGAAAAT+GGG 0.460862 1.2:+70901427 MS.gene60696:CDS
GGTGGCAATGTCTTGTCCTA+TGG 0.461540 1.2:+70900179 None:intergenic
CTAGAAGAAGGTGGAGGCGG+AGG 0.462524 1.2:-70902058 None:intergenic
TGTTGTTGTGGCTGCATTTG+CGG 0.464169 1.2:-70901671 None:intergenic
CCGCCGCGAGAGTGATCTTC+CGG 0.470422 1.2:-70901968 None:intergenic
GACTCAGCATGGATTGGGCC+AGG 0.471357 1.2:+70900212 MS.gene60696:CDS
TTGGGGTCTAGTTCATGGGT+TGG 0.474786 1.2:+70900354 MS.gene60696:CDS
CCAAGTTGAAGGAGGAAAAT+GGG 0.481127 1.2:-70902011 None:intergenic
GAAGTATTCGCCGGAAAAGT+TGG 0.481650 1.2:-70901605 None:intergenic
GATCACTCTCGCGGCGGCGG+AGG 0.481758 1.2:+70901974 MS.gene60696:CDS
CACAAAAGAGTGCGTGAAGA+TGG 0.482942 1.2:+70900378 MS.gene60696:CDS
ATGGTTCTATGAATCACAAA+TGG 0.486517 1.2:+70901793 MS.gene60696:CDS
GTATCTTCTTCGTCTCTCTC+CGG 0.487385 1.2:-70901393 None:intergenic
GCAGGTGAATAATGGGTTGC+CGG 0.489634 1.2:-70901644 None:intergenic
GAAGATCACTCTCGCGGCGG+CGG 0.497832 1.2:+70901971 MS.gene60696:CDS
CCAGTATCTGACCAAGTTGA+AGG 0.506943 1.2:-70902022 None:intergenic
ACAACAAACGAAGAAGAAAC+CGG 0.513607 1.2:+70901374 MS.gene60696:CDS
CATAATGATGATGCTGTTGG+TGG 0.514955 1.2:+70900405 MS.gene60696:CDS
GAATTAGAACTAGAAGAGAC+AGG 0.519069 1.2:-70900300 None:intergenic
CATACTCTTGCTGCTTTGTG+TGG 0.530957 1.2:-70901467 None:intergenic
TTCCATTATCAACTAGAAGA+AGG 0.532961 1.2:-70902070 None:intergenic
TGAAACAGAGGATAATTGAC+TGG 0.543402 1.2:-70901903 None:intergenic
TGGACAAACTGTTGTTGTTG+TGG 0.549653 1.2:-70901683 None:intergenic
GAGAGTGATCTTCCGGTGGC+CGG 0.551531 1.2:-70901961 None:intergenic
TAGTCTCTCAACATATCAGA+AGG 0.553562 1.2:-70901716 None:intergenic
TGGCCCAATCCATGCTGAGT+CGG 0.555533 1.2:-70900210 None:intergenic
ACAGAGGATAATTGACTGGA+AGG 0.556441 1.2:-70901899 None:intergenic
GAGGAGTGAGACAGAGACCA+TGG 0.562124 1.2:+70901417 MS.gene60696:CDS
GACAAAGAAAGTGTCGGAGA+AGG 0.563432 1.2:-70901848 None:intergenic
CAATATTCTCAGCTTCTGAA+AGG 0.563770 1.2:+70901743 MS.gene60696:CDS
CAACTAGAAGAAGGTGGAGG+CGG 0.566020 1.2:-70902061 None:intergenic
AGGAGTGAGACAGAGACCAT+GGG 0.567176 1.2:+70901418 MS.gene60696:CDS
GTCCAAGTCCAACAAGGAAG+TGG 0.570055 1.2:+70900249 MS.gene60696:CDS
CTTCATAATGATGATGCTGT+TGG 0.570479 1.2:+70900402 MS.gene60696:CDS
GGCGGCGGAGGATACAGTGG+TGG 0.581969 1.2:+70901986 MS.gene60696:CDS
AAAGCAGCAAGAGTATGGCT+TGG 0.593615 1.2:+70901473 MS.gene60696:CDS
GAAGATGTTGAAGTATTCGC+CGG 0.597867 1.2:-70901614 None:intergenic
GAAGATGACAAAGAAAGTGT+CGG 0.598239 1.2:-70901854 None:intergenic
GTTTCAGCGCCGACTCAGCA+TGG 0.598763 1.2:+70900201 MS.gene60696:CDS
TGGGCCAGGCCCAAAATGAG+TGG 0.604705 1.2:+70900226 MS.gene60696:CDS
TGAGTCGGCGCTGAAACCAT+AGG 0.611832 1.2:-70900195 None:intergenic
GTTCTATGAATCACAAATGG+AGG 0.612952 1.2:+70901796 MS.gene60696:CDS
GCGGCGGAGGATACAGTGGT+GGG 0.616458 1.2:+70901987 MS.gene60696:CDS
GAGAGACGAAGAAGATACAG+AGG 0.619578 1.2:+70901398 MS.gene60696:CDS
AAACAGAGGAAGTGAAACAG+AGG 0.620525 1.2:-70901915 None:intergenic
AGTCTCTCAACATATCAGAA+GGG 0.623934 1.2:-70901715 None:intergenic
CGCGGCGGCGGAGGATACAG+TGG 0.636120 1.2:+70901983 MS.gene60696:CDS
CATTATCAACTAGAAGAAGG+TGG 0.636159 1.2:-70902067 None:intergenic
GGGCCAGGCCCAAAATGAGT+GGG 0.638742 1.2:+70900227 MS.gene60696:CDS
GAAGCTGCGTTAAGATTCAG+AGG 0.639689 1.2:+70901536 MS.gene60696:CDS
ATTTGCTGACCAGGAAACAG+AGG 0.645426 1.2:-70901929 None:intergenic
GAGTGGGTCCAAGTCCAACA+AGG 0.647051 1.2:+70900243 MS.gene60696:CDS
TCAACTTGGTCAGATACTGG+TGG 0.653497 1.2:+70902025 MS.gene60696:CDS
CCACCGGAAGATCACTCTCG+CGG 0.656458 1.2:+70901965 MS.gene60696:CDS
TATCAACTAGAAGAAGGTGG+AGG 0.657330 1.2:-70902064 None:intergenic
CCGCGAGAGTGATCTTCCGG+TGG 0.670643 1.2:-70901965 None:intergenic
GTATCTGACCAAGTTGAAGG+AGG 0.672605 1.2:-70902019 None:intergenic
AATTAGAACTAGAAGAGACA+GGG 0.674858 1.2:-70900299 None:intergenic
GGAGTGAGACAGAGACCATG+GGG 0.677063 1.2:+70901419 MS.gene60696:CDS
TGTTGTGGCTGCATTTGCGG+TGG 0.680660 1.2:-70901668 None:intergenic
CCGGAAGATCACTCTCGCGG+CGG 0.684179 1.2:+70901968 MS.gene60696:CDS
GCACTAGAAGAATACATACG+AGG 0.768609 1.2:-70900324 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATAAAAGATCATA+AGG - chr1.2:70901285-70901304 None:intergenic 10.0%
!! AAAAAAAAAAAAAAGTCAAC+TGG - chr1.2:70900964-70900983 None:intergenic 15.0%
!! AAAAGTTTAACAAAAAATGA+AGG - chr1.2:70900588-70900607 None:intergenic 15.0%
!!! AAAGTTTTTTTTTTTAGTGA+AGG + chr1.2:70900803-70900822 MS.gene60696:intron 15.0%
!!! ATTCAACTTGTTTTTTAATA+TGG + chr1.2:70900638-70900657 MS.gene60696:intron 15.0%
!!! TTGTTTTTTAATATGGTAAA+TGG + chr1.2:70900645-70900664 MS.gene60696:intron 15.0%
!! TAAAAGTGAAACTAAATAGT+CGG + chr1.2:70901065-70901084 MS.gene60696:intron 20.0%
!!! AAAACAAGTTGAATGAATTT+TGG - chr1.2:70900632-70900651 None:intergenic 20.0%
!!! TACTTAGAAATAACATGTTT+TGG - chr1.2:70900719-70900738 None:intergenic 20.0%
!!! TACTTGTTGGTTTATTAAAA+TGG - chr1.2:70900861-70900880 None:intergenic 20.0%
! AAAAGGTTTAGTAGTTAACA+AGG + chr1.2:70900833-70900852 MS.gene60696:intron 25.0%
! AGTAACATTTGTCTATAGAA+AGG + chr1.2:70900877-70900896 MS.gene60696:intron 25.0%
! ATTGTGTATGTAGATGTAAA+AGG - chr1.2:70900525-70900544 None:intergenic 25.0%
! CTATTTCAACTTATATTGCA+TGG + chr1.2:70901017-70901036 MS.gene60696:intron 25.0%
! GAACAATTTGAACTAAACAA+TGG - chr1.2:70901246-70901265 None:intergenic 25.0%
! GTAACATTTGTCTATAGAAA+GGG + chr1.2:70900878-70900897 MS.gene60696:intron 25.0%
! TTAGTGAAGGATCAATAAAA+AGG + chr1.2:70900816-70900835 MS.gene60696:intron 25.0%
! TTTGGTCATGTGAAATTTAA+GGG - chr1.2:70900701-70900720 None:intergenic 25.0%
!! ACATTAGATTTGGTTGATAT+AGG - chr1.2:70900919-70900938 None:intergenic 25.0%
!! TATAGACAAATGTTACTTGT+TGG - chr1.2:70900874-70900893 None:intergenic 25.0%
!! TGAAATAGTTTTTCCAAGAT+GGG - chr1.2:70901005-70901024 None:intergenic 25.0%
!! TTGAAATAGTTTTTCCAAGA+TGG - chr1.2:70901006-70901025 None:intergenic 25.0%
!! TTTTGGTCATGTGAAATTTA+AGG - chr1.2:70900702-70900721 None:intergenic 25.0%
!!! AATAGTCTCTAAAACAGTAT+TGG + chr1.2:70901210-70901229 MS.gene60696:intron 25.0%
!!! TTTAGATTACCTTTTTCACA+GGG + chr1.2:70900462-70900481 MS.gene60696:CDS 25.0%
!!! TTTTAGATTACCTTTTTCAC+AGG + chr1.2:70900461-70900480 MS.gene60696:CDS 25.0%
AATTAGAACTAGAAGAGACA+GGG - chr1.2:70900302-70900321 None:intergenic 30.0%
ACATATTATATTGCTCCTTC+TGG - chr1.2:70900754-70900773 None:intergenic 30.0%
GTACTTTGCAACATTAGATT+TGG - chr1.2:70900929-70900948 None:intergenic 30.0%
TTGGTCATGTGAAATTTAAG+GGG - chr1.2:70900700-70900719 None:intergenic 30.0%
! ATGGTTCTATGAATCACAAA+TGG + chr1.2:70901793-70901812 MS.gene60696:CDS 30.0%
!! ATTTTCAAGGACTTGAACAA+TGG + chr1.2:70901774-70901793 MS.gene60696:CDS 30.0%
ACAACAAACGAAGAAGAAAC+CGG + chr1.2:70901374-70901393 MS.gene60696:CDS 35.0%
AGTCTCTCAACATATCAGAA+GGG - chr1.2:70901718-70901737 None:intergenic 35.0%
AGTGCTTAGCCTATCAATAT+CGG - chr1.2:70901114-70901133 None:intergenic 35.0%
ATAGGCTAAGCACTTTCATT+CGG + chr1.2:70901120-70901139 MS.gene60696:intron 35.0%
CAATATTCTCAGCTTCTGAA+AGG + chr1.2:70901743-70901762 MS.gene60696:CDS 35.0%
GAAAATAACCACTTCCTTGT+TGG - chr1.2:70900260-70900279 None:intergenic 35.0%
GAATTAGAACTAGAAGAGAC+AGG - chr1.2:70900303-70900322 None:intergenic 35.0%
GTTCTATGAATCACAAATGG+AGG + chr1.2:70901796-70901815 MS.gene60696:CDS 35.0%
TACAAATCTTGATCCCATCT+TGG + chr1.2:70900989-70901008 MS.gene60696:intron 35.0%
TAGTCTCTCAACATATCAGA+AGG - chr1.2:70901719-70901738 None:intergenic 35.0%
TGAAACAGAGGATAATTGAC+TGG - chr1.2:70901906-70901925 None:intergenic 35.0%
TTGCTAATGCCGATATTGAT+AGG + chr1.2:70901102-70901121 MS.gene60696:intron 35.0%
! CTTCATAATGATGATGCTGT+TGG + chr1.2:70900402-70900421 MS.gene60696:CDS 35.0%
! GAAGATGACAAAGAAAGTGT+CGG - chr1.2:70901857-70901876 None:intergenic 35.0%
! TTCAACATCTTCTGTTTCTC+CGG + chr1.2:70901625-70901644 MS.gene60696:CDS 35.0%
! TTGTTGCTGGAACATTTTCA+GGG - chr1.2:70901583-70901602 None:intergenic 35.0%
!! AAAGGTTCTGGTGATTTTCA+AGG + chr1.2:70901761-70901780 MS.gene60696:CDS 35.0%
!! GGTTATTTTCCTATGATGTC+AGG + chr1.2:70900270-70900289 MS.gene60696:CDS 35.0%
AAACAGAGGAAGTGAAACAG+AGG - chr1.2:70901918-70901937 None:intergenic 40.0%
ACAGAGGATAATTGACTGGA+AGG - chr1.2:70901902-70901921 None:intergenic 40.0%
CAAATCCAAAATCTCGCTGT+GGG + chr1.2:70901146-70901165 MS.gene60696:intron 40.0%
GATGAGTTTCCCTGTGAAAA+AGG - chr1.2:70900474-70900493 None:intergenic 40.0%
GCACTAGAAGAATACATACG+AGG - chr1.2:70900327-70900346 None:intergenic 40.0%
GTACAACACTAATGTCCAGA+AGG + chr1.2:70900736-70900755 MS.gene60696:intron 40.0%
TAGGCTAAGCACTTTCATTC+GGG + chr1.2:70901121-70901140 MS.gene60696:intron 40.0%
TATCGGCATTAGCAATCAAG+CGG - chr1.2:70901097-70901116 None:intergenic 40.0%
TCAAATCCAAAATCTCGCTG+TGG + chr1.2:70901145-70901164 MS.gene60696:intron 40.0%
! AAAAACTCCATTTGCTGACC+AGG - chr1.2:70901941-70901960 None:intergenic 40.0%
! ACCAAGTTGAAGGAGGAAAA+TGG - chr1.2:70902015-70902034 None:intergenic 40.0%
! AGCAACAAGACCAACTTTTC+CGG + chr1.2:70901595-70901614 MS.gene60696:CDS 40.0%
! CATAATGATGATGCTGTTGG+TGG + chr1.2:70900405-70900424 MS.gene60696:CDS 40.0%
! CCAAGTTGAAGGAGGAAAAT+GGG - chr1.2:70902014-70902033 None:intergenic 40.0%
! CTTGTTGCTGGAACATTTTC+AGG - chr1.2:70901584-70901603 None:intergenic 40.0%
! GAAGATGTTGAAGTATTCGC+CGG - chr1.2:70901617-70901636 None:intergenic 40.0%
! GTCAGCAAATGGAGTTTTTC+CGG + chr1.2:70901942-70901961 MS.gene60696:CDS 40.0%
! TGGACAAACTGTTGTTGTTG+TGG - chr1.2:70901686-70901705 None:intergenic 40.0%
!! TATCAGAAGGGCTTTGAAAC+TGG - chr1.2:70901706-70901725 None:intergenic 40.0%
!! TCTTCTAGTGCTGCTCTTTT+GGG + chr1.2:70900336-70900355 MS.gene60696:CDS 40.0%
!! TTCTTCTAGTGCTGCTCTTT+TGG + chr1.2:70900335-70900354 MS.gene60696:CDS 40.0%
!!! TCTTTTGGGGTCTAGTTCAT+GGG + chr1.2:70900350-70900369 MS.gene60696:CDS 40.0%
AACCACTTCCTTGTTGGACT+TGG - chr1.2:70900254-70900273 None:intergenic 45.0%
ACAGAGACCATGGGGAAAAT+GGG + chr1.2:70901427-70901446 MS.gene60696:CDS 45.0%
CACACAAAGCAGCAAGAGTA+TGG + chr1.2:70901468-70901487 MS.gene60696:CDS 45.0%
CCTTCAACTTGGTCAGATAC+TGG + chr1.2:70902022-70902041 MS.gene60696:CDS 45.0%
GAAGCTGCGTTAAGATTCAG+AGG + chr1.2:70901536-70901555 MS.gene60696:CDS 45.0%
GAGAGACGAAGAAGATACAG+AGG + chr1.2:70901398-70901417 MS.gene60696:CDS 45.0%
GGGACAAAACCTGACATCAT+AGG - chr1.2:70900282-70900301 None:intergenic 45.0%
GTATCTTCTTCGTCTCTCTC+CGG - chr1.2:70901396-70901415 None:intergenic 45.0%
GTTTCACTTCCTCTGTTTCC+TGG + chr1.2:70901920-70901939 MS.gene60696:CDS 45.0%
TCAACTTGGTCAGATACTGG+TGG + chr1.2:70902025-70902044 MS.gene60696:CDS 45.0%
TCACAGGGAAACTCATCATC+AGG + chr1.2:70900477-70900496 MS.gene60696:CDS 45.0%
TCTGTTTCCTGGTCAGCAAA+TGG + chr1.2:70901931-70901950 MS.gene60696:CDS 45.0%
TGTTGTTGTGGCTGCATTTG+CGG - chr1.2:70901674-70901693 None:intergenic 45.0%
! AAAGCAGCAAGAGTATGGCT+TGG + chr1.2:70901473-70901492 MS.gene60696:CDS 45.0%
! ATTTGCTGACCAGGAAACAG+AGG - chr1.2:70901932-70901951 None:intergenic 45.0%
! CACAAAAGAGTGCGTGAAGA+TGG + chr1.2:70900378-70900397 MS.gene60696:CDS 45.0%
! CCAGTATCTGACCAAGTTGA+AGG - chr1.2:70902025-70902044 None:intergenic 45.0%
! CCCATTTTCCTCCTTCAACT+TGG + chr1.2:70902011-70902030 MS.gene60696:CDS 45.0%
! GAAGTATTCGCCGGAAAAGT+TGG - chr1.2:70901608-70901627 None:intergenic 45.0%
! GACTTGGACCCACTCATTTT+GGG - chr1.2:70900238-70900257 None:intergenic 45.0%
! GTATCTGACCAAGTTGAAGG+AGG - chr1.2:70902022-70902041 None:intergenic 45.0%
! TCTCAGCTTCTGAAAGGTTC+TGG + chr1.2:70901749-70901768 MS.gene60696:CDS 45.0%
!! CATACTCTTGCTGCTTTGTG+TGG - chr1.2:70901470-70901489 None:intergenic 45.0%
!! CTTCTAGTGCTGCTCTTTTG+GGG + chr1.2:70900337-70900356 MS.gene60696:CDS 45.0%
!! GACAAAGAAAGTGTCGGAGA+AGG - chr1.2:70901851-70901870 None:intergenic 45.0%
!! GGAAAAGTTGGTCTTGTTGC+TGG - chr1.2:70901596-70901615 None:intergenic 45.0%
!!! CTCTTTTGGGGTCTAGTTCA+TGG + chr1.2:70900349-70900368 MS.gene60696:CDS 45.0%
AGGAGTGAGACAGAGACCAT+GGG + chr1.2:70901418-70901437 MS.gene60696:CDS 50.0%
CAACTAGAAGAAGGTGGAGG+CGG - chr1.2:70902064-70902083 None:intergenic 50.0%
CGGTGGTGCAGGTGAATAAT+GGG - chr1.2:70901654-70901673 None:intergenic 50.0%
GACAGAGACCATGGGGAAAA+TGG + chr1.2:70901426-70901445 MS.gene60696:CDS 50.0%
GTCCAAGTCCAACAAGGAAG+TGG + chr1.2:70900249-70900268 MS.gene60696:CDS 50.0%
! AATGGAGTTTTTCCGGCCAC+CGG + chr1.2:70901949-70901968 MS.gene60696:CDS 50.0%
! GGACTTGGACCCACTCATTT+TGG - chr1.2:70900239-70900258 None:intergenic 50.0%
! TTGGGGTCTAGTTCATGGGT+TGG + chr1.2:70900354-70900373 MS.gene60696:CDS 50.0%
!! GCAGGTGAATAATGGGTTGC+CGG - chr1.2:70901647-70901666 None:intergenic 50.0%
GAGGAGTGAGACAGAGACCA+TGG + chr1.2:70901417-70901436 MS.gene60696:CDS 55.0%
GAGTGGGTCCAAGTCCAACA+AGG + chr1.2:70900243-70900262 MS.gene60696:CDS 55.0%
GCGGTGGTGCAGGTGAATAA+TGG - chr1.2:70901655-70901674 None:intergenic 55.0%
GGAGTGAGACAGAGACCATG+GGG + chr1.2:70901419-70901438 MS.gene60696:CDS 55.0%
TGGCCCAATCCATGCTGAGT+CGG - chr1.2:70900213-70900232 None:intergenic 55.0%
TGTTGTGGCTGCATTTGCGG+TGG - chr1.2:70901671-70901690 None:intergenic 55.0%
! GCTCACCCACAGCGAGATTT+TGG - chr1.2:70901154-70901173 None:intergenic 55.0%
! TCTGCTGCCCATTTTCCCCA+TGG - chr1.2:70901437-70901456 None:intergenic 55.0%
! TGAGTCGGCGCTGAAACCAT+AGG - chr1.2:70900198-70900217 None:intergenic 55.0%
CCACCGGAAGATCACTCTCG+CGG + chr1.2:70901965-70901984 MS.gene60696:CDS 60.0%
CTAGAAGAAGGTGGAGGCGG+AGG - chr1.2:70902061-70902080 None:intergenic 60.0%
GAGAGTGATCTTCCGGTGGC+CGG - chr1.2:70901964-70901983 None:intergenic 60.0%
GGGCCAGGCCCAAAATGAGT+GGG + chr1.2:70900227-70900246 MS.gene60696:CDS 60.0%
TGGGCCAGGCCCAAAATGAG+TGG + chr1.2:70900226-70900245 MS.gene60696:CDS 60.0%
! GGACCCACTCATTTTGGGCC+TGG - chr1.2:70900233-70900252 None:intergenic 60.0%
!! AGCGCCGACTCAGCATGGAT+TGG + chr1.2:70900206-70900225 MS.gene60696:CDS 60.0%
!! GACTCAGCATGGATTGGGCC+AGG + chr1.2:70900212-70900231 MS.gene60696:CDS 60.0%
!! GCGCCGACTCAGCATGGATT+GGG + chr1.2:70900207-70900226 MS.gene60696:CDS 60.0%
!! GTTTCAGCGCCGACTCAGCA+TGG + chr1.2:70900201-70900220 MS.gene60696:CDS 60.0%
CCGCCGCGAGAGTGATCTTC+CGG - chr1.2:70901971-70901990 None:intergenic 65.0%
CCGCGAGAGTGATCTTCCGG+TGG - chr1.2:70901968-70901987 None:intergenic 65.0%
CCGGAAGATCACTCTCGCGG+CGG + chr1.2:70901968-70901987 MS.gene60696:CDS 65.0%
GAAGAAGGTGGAGGCGGAGG+AGG - chr1.2:70902058-70902077 None:intergenic 65.0%
GAAGATCACTCTCGCGGCGG+CGG + chr1.2:70901971-70901990 MS.gene60696:CDS 65.0%
GCGGCGGAGGATACAGTGGT+GGG + chr1.2:70901987-70902006 MS.gene60696:CDS 65.0%
GGCTGCATTTGCGGTGGTGC+AGG - chr1.2:70901665-70901684 None:intergenic 65.0%
GGCGGCGGAGGATACAGTGG+TGG + chr1.2:70901986-70902005 MS.gene60696:CDS 70.0%
CGCGGCGGCGGAGGATACAG+TGG + chr1.2:70901983-70902002 MS.gene60696:CDS 75.0%
GATCACTCTCGCGGCGGCGG+AGG + chr1.2:70901974-70901993 MS.gene60696:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 70900186 70902084 70900186 ID=MS.gene60696
chr1.2 mRNA 70900186 70902084 70900186 ID=MS.gene60696.t1;Parent=MS.gene60696
chr1.2 exon 70900186 70900498 70900186 ID=MS.gene60696.t1.exon1;Parent=MS.gene60696.t1
chr1.2 CDS 70900186 70900498 70900186 ID=cds.MS.gene60696.t1;Parent=MS.gene60696.t1
chr1.2 exon 70901315 70902084 70901315 ID=MS.gene60696.t1.exon2;Parent=MS.gene60696.t1
chr1.2 CDS 70901315 70902084 70901315 ID=cds.MS.gene60696.t1;Parent=MS.gene60696.t1
Gene Sequence

>MS.gene60696

ATGTCTTGTCCTATGGTTTCAGCGCCGACTCAGCATGGATTGGGCCAGGCCCAAAATGAGTGGGTCCAAGTCCAACAAGGAAGTGGTTATTTTCCTATGATGTCAGGTTTTGTCCCTGTCTCTTCTAGTTCTAATTCTCCTCGTATGTATTCTTCTAGTGCTGCTCTTTTGGGGTCTAGTTCATGGGTTGGACACAAAAGAGTGCGTGAAGATGGTCTTCATAATGATGATGCTGTTGGTGGTTCTTCTCAACAAGATATCAGAAATATTGCTGATTTTAGATTACCTTTTTCACAGGGAAACTCATCATCAGGTACTATTGCTTTCATTTTCTCTCCTTTTACATCTACATACACAATTGCATTATCATCTTCATCATAAATAATTGACATAAGAATTCCTTCATTTTTTGTTAAACTTTTTTTTTCTAAATTTAATGTTGACCAAAATTCATTCAACTTGTTTTTTAATATGGTAAATGGAACAATCTATGAAAAGTACTATTATTAATCCCCTTAAATTTCACATGACCAAAACATGTTATTTCTAAGTACAACACTAATGTCCAGAAGGAGCAATATAATATGTGTGTTGAGATGCTAAAGAACAGTCAAGAAAAAGTTTTTTTTTTTAGTGAAGGATCAATAAAAAGGTTTAGTAGTTAACAAGGTACCATTTTAATAAACCAACAAGTAACATTTGTCTATAGAAAGGGTGCAAGCAACATTAACCTATATCAACCAAATCTAATGTTGCAAAGTACACATAAACATAACCAGTTGACTTTTTTTTTTTTTTTTTTTTACAAATCTTGATCCCATCTTGGAAAAACTATTTCAACTTATATTGCATGGATATTAAAATTTTCATTAACAATAATAAAAGTGAAACTAAATAGTCGGTAAGATCCGCTTGATTGCTAATGCCGATATTGATAGGCTAAGCACTTTCATTCGGGTTCAAATCCAAAATCTCGCTGTGGGTGAGCTTTGACAAAAAACAAAAATGAAACTTAATAATATACAATAGTCTCTAAAACAGTATTGGAAATGAAAAACCATTGTTTAGTTCAAATTGTTCAATATATATAATTGTACCTTATGATCTTTTATTTTATTTGAAAAAACAGTAACAGAAGCAACAACTTCAAGTACAAGCAATGTAACACAATCGAGTGAAGCAGCTTCGACAACAAACGAAGAAGAAACCGGAGAGAGACGAAGAAGATACAGAGGAGTGAGACAGAGACCATGGGGAAAATGGGCAGCAGAAATTCGAGATCCACACAAAGCAGCAAGAGTATGGCTTGGAACATTTGAAACTGCAGAAGCTGCAGCAAGAGCTTACGATGAAGCTGCGTTAAGATTCAGAGGAAACAGAGCAAAACTCAACTTCCCTGAAAATGTTCCAGCAACAAGACCAACTTTTCCGGCGAATACTTCAACATCTTCTGTTTCTCCGGCAACCCATTATTCACCTGCACCACCGCAAATGCAGCCACAACAACAACAGTTTGTCCAGTTTCAAAGCCCTTCTGATATGTTGAGAGACTATTATCAATATTCTCAGCTTCTGAAAGGTTCTGGTGATTTTCAAGGACTTGAACAATGGTTCTATGAATCACAAATGGAGGCAATACATTCATCTTCTTCGATGTTATCGCCTTCTCCGACACTTTCTTTGTCATCTTCTTCATCTTCAACTGCATTTTCACCTTCCAGTCAATTATCCTCTGTTTCACTTCCTCTGTTTCCTGGTCAGCAAATGGAGTTTTTCCGGCCACCGGAAGATCACTCTCGCGGCGGCGGAGGATACAGTGGTGGGTCCCATTTTCCTCCTTCAACTTGGTCAGATACTGGTGGTTATCATCCTCCTCCGCCTCCACCTTCTTCTAGTTGA
Protein sequence

>MS.gene60696.t1

MSCPMVSAPTQHGLGQAQNEWVQVQQGSGYFPMMSGFVPVSSSSNSPRMYSSSAALLGSSSWVGHKRVREDGLHNDDAVGGSSQQDIRNIADFRLPFSQGNSSSVTEATTSSTSNVTQSSEAASTTNEEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFETAEAAARAYDEAALRFRGNRAKLNFPENVPATRPTFPANTSTSSVSPATHYSPAPPQMQPQQQQFVQFQSPSDMLRDYYQYSQLLKGSGDFQGLEQWFYESQMEAIHSSSSMLSPSPTLSLSSSSSSTAFSPSSQLSSVSLPLFPGQQMEFFRPPEDHSRGGGGYSGGSHFPPSTWSDTGGYHPPPPPPSSS