Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61132.t1 | XP_003606608.2 | 95.1 | 933 | 39 | 1 | 1 | 933 | 1 | 926 | 0.00E+00 | 1641.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61132.t1 | F4JI44 | 39.4 | 968 | 458 | 18 | 24 | 927 | 9 | 911 | 2.2e-155 | 551.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61132.t1 | G7JTN6 | 95.1 | 933 | 39 | 1 | 1 | 933 | 1 | 926 | 0.0e+00 | 1641.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene61132 | 0.807673 | 4.51E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61132.t1 | MTR_4g063030 | 95.927 | 933 | 31 | 1 | 1 | 933 | 1 | 926 | 0.0 | 1850 |
| MS.gene61132.t1 | MTR_2g096290 | 56.861 | 962 | 319 | 9 | 11 | 932 | 65 | 970 | 0.0 | 1044 |
| MS.gene61132.t1 | MTR_2g096290 | 61.273 | 754 | 256 | 6 | 11 | 734 | 4 | 751 | 0.0 | 902 |
| MS.gene61132.t1 | MTR_4g061370 | 52.800 | 125 | 28 | 1 | 98 | 222 | 830 | 923 | 1.56e-27 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61132.t1 | AT4G03090 | 40.292 | 958 | 438 | 21 | 24 | 927 | 9 | 886 | 0.0 | 597 |
| MS.gene61132.t1 | AT4G03090 | 40.292 | 958 | 438 | 21 | 24 | 927 | 9 | 886 | 0.0 | 597 |
| MS.gene61132.t1 | AT4G03090 | 40.292 | 958 | 438 | 21 | 24 | 927 | 18 | 895 | 0.0 | 596 |
| MS.gene61132.t1 | AT4G03090 | 39.692 | 975 | 445 | 21 | 24 | 927 | 9 | 911 | 0.0 | 590 |
| MS.gene61132.t1 | AT4G03090 | 43.586 | 725 | 363 | 16 | 24 | 734 | 9 | 701 | 2.74e-168 | 509 |
Find 175 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCAAGTTACCTTAGAATT+TGG | 0.180899 | 4.4:+42812906 | None:intergenic |
| ACTCACAATGGATAGTATTT+TGG | 0.181485 | 4.4:+42815687 | None:intergenic |
| TGCTTCAGTTGGATGGATTT+TGG | 0.186617 | 4.4:-42813458 | MS.gene61132:CDS |
| GTGCCAGCAGAAATTGTTTA+AGG | 0.186702 | 4.4:-42817737 | MS.gene61132:CDS |
| CAAACACTATTTACTTCTTC+TGG | 0.187242 | 4.4:-42810048 | MS.gene61132:CDS |
| GTGATAGGTTGACATATTTA+TGG | 0.194667 | 4.4:-42817920 | MS.gene61132:intron |
| CGCCGTTATCTGCATGATTA+AGG | 0.207862 | 4.4:+42809300 | None:intergenic |
| CTGCTGACCTGATCAAATTT+AGG | 0.234197 | 4.4:+42818906 | None:intergenic |
| AGCAGCTTACATCTATTAAC+AGG | 0.261606 | 4.4:-42818361 | MS.gene61132:CDS |
| ATATTTATGGATGCAGCTTT+TGG | 0.268382 | 4.4:-42817907 | MS.gene61132:CDS |
| GACTTGTTGAAGTCTGCTTT+TGG | 0.276489 | 4.4:-42814167 | MS.gene61132:CDS |
| CTGCTTCTTATGCACATAAT+AGG | 0.284010 | 4.4:-42813363 | MS.gene61132:CDS |
| TTGCTAACAGTAGCAGCTTT+AGG | 0.287339 | 4.4:+42813074 | None:intergenic |
| GAAAGAGCTTGGAGGAATTA+GGG | 0.287696 | 4.4:-42808413 | MS.gene61132:CDS |
| AACTATAATGAATGATAAAA+TGG | 0.288503 | 4.4:-42809063 | MS.gene61132:CDS |
| GGAAAGAGCTTGGAGGAATT+AGG | 0.291098 | 4.4:-42808414 | MS.gene61132:CDS |
| TCAACGCCAGATAAGCAAAA+AGG | 0.295843 | 4.4:-42808668 | MS.gene61132:CDS |
| CCTTTCCCATCTGAACTTAC+TGG | 0.302192 | 4.4:-42808339 | MS.gene61132:CDS |
| GGAGCGCCTGCTCAATAATA+AGG | 0.302931 | 4.4:-42817716 | MS.gene61132:intron |
| CTCTGTTTCTGAGAGATTAG+AGG | 0.309355 | 4.4:+42813510 | None:intergenic |
| TCTTGCTCACCAAGATTGTT+AGG | 0.321508 | 4.4:+42808620 | None:intergenic |
| ATCACCACAAAGTTTAGATT+TGG | 0.321677 | 4.4:-42815314 | MS.gene61132:CDS |
| CTATTTACTTCTTCTGGATC+TGG | 0.327644 | 4.4:-42810042 | MS.gene61132:CDS |
| ATCTTGGCGACGACTTAAAT+AGG | 0.332010 | 4.4:-42809451 | MS.gene61132:CDS |
| GGTCAGTTCGCGTTGTTGTT+AGG | 0.334242 | 4.4:-42817885 | MS.gene61132:CDS |
| GGCTCATTTCGCTGCATATC+AGG | 0.354486 | 4.4:+42809128 | None:intergenic |
| GATCCATTTGCAGGCATTCC+AGG | 0.356203 | 4.4:+42813138 | None:intergenic |
| GCTGCATTTCGCTGCATCTC+TGG | 0.361941 | 4.4:+42809008 | None:intergenic |
| TAAGCTAGCCCGCACATCTA+AGG | 0.365530 | 4.4:-42808696 | MS.gene61132:CDS |
| GAGTCGGAGGACACTCTTAC+TGG | 0.372462 | 4.4:+42808644 | None:intergenic |
| TTGTAGGAGGCTCAGAGTAT+AGG | 0.374937 | 4.4:-42809605 | MS.gene61132:intron |
| TTAATCTGTAAAAGCCCAAT+TGG | 0.379979 | 4.4:+42814104 | None:intergenic |
| ACCATCTCGCAGCGGTGAAC+AGG | 0.381317 | 4.4:-42819389 | MS.gene61132:CDS |
| TGATAAAATGGTGGAATTGA+TGG | 0.382793 | 4.4:-42809051 | MS.gene61132:CDS |
| TGATAAACTGGTGGAATTGA+TGG | 0.383375 | 4.4:-42809171 | MS.gene61132:CDS |
| GCAGAGGCTGAAAGAAAGTT+AGG | 0.383489 | 4.4:-42808306 | MS.gene61132:CDS |
| GTAGAGAAGCCTCACATTGC+TGG | 0.389328 | 4.4:+42817776 | None:intergenic |
| TCTACAGAATCCAACATTCT+TGG | 0.389824 | 4.4:-42813416 | MS.gene61132:CDS |
| TTAGCCAAATCTAAACTTTG+TGG | 0.394390 | 4.4:+42815310 | None:intergenic |
| TGTAGGAGGCTCAGAGTATA+GGG | 0.395624 | 4.4:-42809604 | MS.gene61132:intron |
| GCTTGGAAATGCAGAATTAT+CGG | 0.398959 | 4.4:+42809508 | None:intergenic |
| TGGTAAAGGAAAGGTACTTC+AGG | 0.401508 | 4.4:-42808454 | MS.gene61132:CDS |
| AACTGTGGTAAATGATAAAC+TGG | 0.402097 | 4.4:-42809183 | MS.gene61132:CDS |
| TTTGGATAATAGTTCATCAA+TGG | 0.406126 | 4.4:-42813440 | MS.gene61132:CDS |
| ATTTAGATAGATCCATTTGC+AGG | 0.409607 | 4.4:+42813129 | None:intergenic |
| GCAAAACATTGGCAATATCT+TGG | 0.414068 | 4.4:+42818320 | None:intergenic |
| AGGAGGATGTCCAAATTCTA+AGG | 0.414848 | 4.4:-42812916 | MS.gene61132:intron |
| TTTGTGTACACAGATTGATA+TGG | 0.417063 | 4.4:-42819063 | MS.gene61132:intron |
| AATCTTCATTGTCATGTTCC+CGG | 0.420015 | 4.4:-42813313 | MS.gene61132:CDS |
| GCCTGTTCACCGCTGCGAGA+TGG | 0.425180 | 4.4:+42819388 | None:intergenic |
| AGAGTTGAAAACACAAATCT+TGG | 0.425827 | 4.4:-42809467 | MS.gene61132:CDS |
| ATCTATCTAAATTGCTGCCT+GGG | 0.438721 | 4.4:-42813118 | MS.gene61132:CDS |
| CGAACCTGCTGAACTTGATA+AGG | 0.441242 | 4.4:-42809555 | MS.gene61132:CDS |
| AAGACTGCAGTACAAGAATT+CGG | 0.442911 | 4.4:+42808256 | None:intergenic |
| TATTTACTTCTTCTGGATCT+GGG | 0.444435 | 4.4:-42810041 | MS.gene61132:CDS |
| GCAGGTTCGTTTACTTGTAA+AGG | 0.444577 | 4.4:+42809569 | None:intergenic |
| TGATAAGGTTGGTAACTTGA+AGG | 0.446954 | 4.4:-42809540 | MS.gene61132:CDS |
| ATGCAGCGTCACTTCAATCA+TGG | 0.448196 | 4.4:-42808992 | MS.gene61132:CDS |
| TATGATTTATTTGCTTCAGT+TGG | 0.450489 | 4.4:-42813469 | MS.gene61132:CDS |
| GGAAAACCTTATTATTGAGC+AGG | 0.450872 | 4.4:+42817710 | None:intergenic |
| GATCTATCTAAATTGCTGCC+TGG | 0.452205 | 4.4:-42813119 | MS.gene61132:CDS |
| GGACCAACCTTCACAACGGC+CGG | 0.452235 | 4.4:+42813294 | None:intergenic |
| ATTTATTTGCTTCAGTTGGA+TGG | 0.453068 | 4.4:-42813465 | MS.gene61132:CDS |
| TCGGCTTCCTAAATTTGATC+AGG | 0.458179 | 4.4:-42818913 | MS.gene61132:intron |
| CATCCTTTAGTAATCTATAA+AGG | 0.458489 | 4.4:+42819200 | None:intergenic |
| ACTGATAGAAGATACCCAAT+TGG | 0.461889 | 4.4:-42814119 | MS.gene61132:CDS |
| GTATTATGTTGACCTATGCT+TGG | 0.463649 | 4.4:+42809491 | None:intergenic |
| TCCGACTCACCTAACAATCT+TGG | 0.475188 | 4.4:-42808629 | MS.gene61132:intron |
| CAACATCAGGTAGGAGGTAA+AGG | 0.475878 | 4.4:-42809428 | MS.gene61132:CDS |
| ATTGATGGAGAGGGCACTCT+TGG | 0.478781 | 4.4:-42809036 | MS.gene61132:CDS |
| GTTCCTGGAATGCCTGCAAA+TGG | 0.480485 | 4.4:-42813141 | MS.gene61132:CDS |
| GGCTAAATCTGTTGCAGTGG+AGG | 0.483726 | 4.4:-42815293 | MS.gene61132:intron |
| GGACCTTTATAGATTACTAA+AGG | 0.485737 | 4.4:-42819203 | MS.gene61132:CDS |
| TATAGATTACTAAAGGATGC+TGG | 0.490100 | 4.4:-42819196 | MS.gene61132:CDS |
| CATGTTCCCGGCCGTTGTGA+AGG | 0.491045 | 4.4:-42813301 | MS.gene61132:intron |
| GGATCGTCGCTGGAATTTCA+AGG | 0.491100 | 4.4:-42815717 | MS.gene61132:CDS |
| TCAGATACTAGTTCTGCAAA+AGG | 0.492216 | 4.4:-42809332 | MS.gene61132:CDS |
| TGAAACTCCGGACGATGAAA+AGG | 0.493811 | 4.4:-42809237 | MS.gene61132:CDS |
| ATTGATGGAGAGCGCACTCT+TGG | 0.494731 | 4.4:-42809156 | MS.gene61132:CDS |
| GTCCTTAATCATGCAGATAA+CGG | 0.496263 | 4.4:-42809302 | MS.gene61132:CDS |
| GAAGTACCAGTAAGTTCAGA+TGG | 0.500529 | 4.4:+42808333 | None:intergenic |
| ATATGCAATTCCAAGAATGT+TGG | 0.503031 | 4.4:+42813406 | None:intergenic |
| CCAACCTTATCAAGTTCAGC+AGG | 0.503594 | 4.4:+42809551 | None:intergenic |
| TCAGAATCAATGAAGCGTCT+TGG | 0.503745 | 4.4:-42809275 | MS.gene61132:CDS |
| CTACGAGAGCAGAATGCAAA+AGG | 0.503980 | 4.4:+42818386 | None:intergenic |
| CTTTATGTGATTTATCCCCT+CGG | 0.509702 | 4.4:-42818932 | MS.gene61132:CDS |
| CAGGTGAATGGCAAATGGTA+TGG | 0.510294 | 4.4:-42808435 | MS.gene61132:CDS |
| CGTGGAGAGGAGATTGGTAA+AGG | 0.510370 | 4.4:-42808468 | MS.gene61132:CDS |
| AATTGCACAAACTCAACTCT+CGG | 0.511635 | 4.4:-42819225 | MS.gene61132:CDS |
| GGAAAGGTACTTCAGGTGAA+TGG | 0.514463 | 4.4:-42808447 | MS.gene61132:CDS |
| AGACGGAGGATTTGATTCCA+TGG | 0.515435 | 4.4:+42817822 | None:intergenic |
| TGCAAGAATGATGATTGCTA+AGG | 0.515652 | 4.4:-42819416 | None:intergenic |
| GCTAGTAACACTGTGTTAAG+AGG | 0.516616 | 4.4:-42809401 | MS.gene61132:CDS |
| TAATCTGTAAAAGCCCAATT+GGG | 0.517669 | 4.4:+42814105 | None:intergenic |
| TACTTCAGGTGAATGGCAAA+TGG | 0.520843 | 4.4:-42808440 | MS.gene61132:CDS |
| ATTCCAGCGACGATCCTAGT+TGG | 0.521621 | 4.4:+42815724 | None:intergenic |
| CGACTTAAATAGGCAACATC+AGG | 0.524206 | 4.4:-42809441 | MS.gene61132:CDS |
| CATTTCGTTTGTCGATCAAG+TGG | 0.525882 | 4.4:-42815341 | MS.gene61132:CDS |
| TGAACTATCCTTAGATGTGC+GGG | 0.530384 | 4.4:+42808688 | None:intergenic |
| GAAGTCGTTCGTTGCAATGT+TGG | 0.530801 | 4.4:-42808516 | MS.gene61132:CDS |
| CTGATAGAAGATACCCAATT+GGG | 0.530878 | 4.4:-42814118 | MS.gene61132:CDS |
| ACCAAGATTGTTAGGTGAGT+CGG | 0.533268 | 4.4:+42808628 | None:intergenic |
| GCTCCTTAAACAATTTCTGC+TGG | 0.534039 | 4.4:+42817734 | None:intergenic |
| TATTCTTAGTACCTACAGAC+AGG | 0.535882 | 4.4:-42818533 | MS.gene61132:intron |
| TTACAGGAACTATGTGGAAA+GGG | 0.543631 | 4.4:-42815802 | MS.gene61132:intron |
| GTTACAGGAACTATGTGGAA+AGG | 0.544841 | 4.4:-42815803 | MS.gene61132:intron |
| ATGAGCTATATGCTGACAAA+GGG | 0.546731 | 4.4:-42808371 | MS.gene61132:CDS |
| AGGTGCCATGAGAGTGTTGT+GGG | 0.547979 | 4.4:-42808286 | MS.gene61132:CDS |
| TCAGTAGTAGTCGGATACCC+AGG | 0.548361 | 4.4:+42814137 | None:intergenic |
| ACTTCAAGATAGATTGAGCA+AGG | 0.548573 | 4.4:+42815767 | None:intergenic |
| AAATAAACTACTTGCTCAGA+CGG | 0.549562 | 4.4:+42817805 | None:intergenic |
| AAGGTTGGTAACTTGAAGGA+AGG | 0.549942 | 4.4:-42809536 | MS.gene61132:CDS |
| AAATGAGCCAGAGGATGAAA+AGG | 0.556321 | 4.4:-42809114 | MS.gene61132:CDS |
| CAAATGGTATGGAAAGAGCT+TGG | 0.556811 | 4.4:-42808424 | MS.gene61132:CDS |
| ATTTCTGCTGGCACAATGCG+TGG | 0.558642 | 4.4:+42817746 | None:intergenic |
| TACTGGTACTTCATTTGCAG+AGG | 0.561660 | 4.4:-42808322 | MS.gene61132:CDS |
| TTTCCAACTAGGATCGTCGC+TGG | 0.566296 | 4.4:-42815727 | MS.gene61132:CDS |
| ATTTACTTCTTCTGGATCTG+GGG | 0.567838 | 4.4:-42810040 | MS.gene61132:CDS |
| GGAATTAGGGGTCTATGTCA+TGG | 0.568214 | 4.4:-42808400 | MS.gene61132:CDS |
| TGCAGCGTCACTTCAATCAT+GGG | 0.569446 | 4.4:-42808991 | MS.gene61132:CDS |
| TTGAACTATCCTTAGATGTG+CGG | 0.573772 | 4.4:+42808687 | None:intergenic |
| CCTGCTGAACTTGATAAGGT+TGG | 0.575447 | 4.4:-42809551 | MS.gene61132:CDS |
| GACCAACCTTCACAACGGCC+GGG | 0.578200 | 4.4:+42813295 | None:intergenic |
| TTTACTTCTTCTGGATCTGG+GGG | 0.579211 | 4.4:-42810039 | MS.gene61132:CDS |
| AGAGGAGATTGGTAAAGGAA+AGG | 0.579728 | 4.4:-42808463 | MS.gene61132:CDS |
| AATTCTGCATTTCCAAGCAT+AGG | 0.580960 | 4.4:-42809503 | MS.gene61132:CDS |
| CGAATCCCACAACACTCTCA+TGG | 0.583467 | 4.4:+42808281 | None:intergenic |
| ATTGCACAAACTCAACTCTC+GGG | 0.583532 | 4.4:-42819224 | MS.gene61132:CDS |
| TTTGGCTAAATCTGTTGCAG+TGG | 0.585669 | 4.4:-42815296 | MS.gene61132:CDS |
| TATAATGAATGATAAAATGG+TGG | 0.586134 | 4.4:-42809060 | MS.gene61132:CDS |
| TATGAGCTATATGCTGACAA+AGG | 0.593936 | 4.4:-42808372 | MS.gene61132:CDS |
| GATTGTAGTTGATGAAACTC+CGG | 0.594244 | 4.4:-42809249 | MS.gene61132:CDS |
| CGGGTGTGCAAGCAAAACAT+TGG | 0.597604 | 4.4:+42818309 | None:intergenic |
| CAATGTTGGTCAAAGTGCTG+TGG | 0.598962 | 4.4:-42808502 | MS.gene61132:CDS |
| TCAGGTAGGAGGTAAAGGTA+TGG | 0.607656 | 4.4:-42809423 | MS.gene61132:CDS |
| AAATGGTGGAATTGATGGAG+AGG | 0.608160 | 4.4:-42809046 | MS.gene61132:CDS |
| TGATCAAATTTAGGAAGCCG+AGG | 0.610227 | 4.4:+42818915 | None:intergenic |
| TTGCTACAAAGATATTTCCA+TGG | 0.612546 | 4.4:-42817839 | MS.gene61132:CDS |
| CCAGTAAGTTCAGATGGGAA+AGG | 0.612865 | 4.4:+42808339 | None:intergenic |
| AATGTGCGTGGAGAGGAGAT+TGG | 0.613773 | 4.4:-42808474 | MS.gene61132:CDS |
| ATGGTATGGAAAGAGCTTGG+AGG | 0.613988 | 4.4:-42808421 | MS.gene61132:CDS |
| TTTACTCTGCAGAAAGTGAG+AGG | 0.616492 | 4.4:-42813181 | MS.gene61132:intron |
| ACTGAAGAAAACCTGTCTGT+AGG | 0.616578 | 4.4:+42818522 | None:intergenic |
| CAGTAGTAGTCGGATACCCA+GGG | 0.616928 | 4.4:+42814138 | None:intergenic |
| GATCAAATTTAGGAAGCCGA+GGG | 0.617132 | 4.4:+42818916 | None:intergenic |
| TAAACTACTTGCTCAGACGG+AGG | 0.619977 | 4.4:+42817808 | None:intergenic |
| AATAGGCAACATCAGGTAGG+AGG | 0.620408 | 4.4:-42809434 | MS.gene61132:CDS |
| ATCTAAACTTTGTGGTGATG+TGG | 0.622983 | 4.4:+42815318 | None:intergenic |
| TTGCAACGAACGACTTCTAG+AGG | 0.624222 | 4.4:+42808522 | None:intergenic |
| TATCTTCTATCAGTAGTAGT+CGG | 0.624223 | 4.4:+42814128 | None:intergenic |
| CTCTAATCTCTCAGAAACAG+AGG | 0.624773 | 4.4:-42813509 | MS.gene61132:CDS |
| AAGTACCAGTAAGTTCAGAT+GGG | 0.624982 | 4.4:+42808334 | None:intergenic |
| GAATCCTAGTCACATTCAAG+TGG | 0.626822 | 4.4:+42819356 | None:intergenic |
| AGTGTTGTAATGAGATGCAA+TGG | 0.635936 | 4.4:+42819020 | None:intergenic |
| AATGGTGGAATTGATGGAGA+GGG | 0.640387 | 4.4:-42809045 | MS.gene61132:CDS |
| AAAGAGCTTGGAGGAATTAG+GGG | 0.650481 | 4.4:-42808412 | MS.gene61132:CDS |
| TTATGTGCATAAGAAGCAGA+AGG | 0.651924 | 4.4:+42813367 | None:intergenic |
| GCTCAGAAAGCTGAAACAAG+TGG | 0.656109 | 4.4:-42809356 | MS.gene61132:CDS |
| TGTGGTAAATGATAAACTGG+TGG | 0.658273 | 4.4:-42809180 | MS.gene61132:CDS |
| GCAGCTTACATCTATTAACA+GGG | 0.658572 | 4.4:-42818360 | MS.gene61132:CDS |
| GAGATTAGAGGAACACCAAG+AGG | 0.666437 | 4.4:+42813522 | None:intergenic |
| TAATCTCTCAGAAACAGAGG+AGG | 0.671600 | 4.4:-42813506 | MS.gene61132:CDS |
| TTAAATAGGCAACATCAGGT+AGG | 0.680186 | 4.4:-42809437 | MS.gene61132:CDS |
| GCTGTGGTTGTAAATGTGCG+TGG | 0.686202 | 4.4:-42808486 | MS.gene61132:CDS |
| AAGATTGTTAGGTGAGTCGG+AGG | 0.686542 | 4.4:+42808631 | None:intergenic |
| AGGAGTAAGAGATACAGACA+AGG | 0.687236 | 4.4:-42809381 | MS.gene61132:CDS |
| CAAGGGACCAACCTTCACAA+CGG | 0.688319 | 4.4:+42813290 | None:intergenic |
| TCAGATGCGAAAGAAAACCC+AGG | 0.693289 | 4.4:+42813101 | None:intergenic |
| AATAATATCAGTCTCCCATG+CGG | 0.695522 | 4.4:-42813554 | MS.gene61132:CDS |
| GGTTGTAAATGTGCGTGGAG+AGG | 0.717179 | 4.4:-42808481 | MS.gene61132:CDS |
| GTGTTCAAACACGTGTTACG+TGG | 0.722374 | 4.4:-42818972 | MS.gene61132:CDS |
| ATCAAATTTAGGAAGCCGAG+GGG | 0.724949 | 4.4:+42818917 | None:intergenic |
| TAGGTGCCATGAGAGTGTTG+TGG | 0.728876 | 4.4:-42808287 | MS.gene61132:CDS |
| TATGCAGCGAAATGAGCCAG+AGG | 0.733058 | 4.4:-42809123 | MS.gene61132:CDS |
| AAGGAAGAACCATCTCGCAG+CGG | 0.739935 | 4.4:-42819397 | MS.gene61132:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 42808251 | 42819431 | 42808251 | ID=MS.gene61132 |
| chr4.4 | mRNA | 42808251 | 42819431 | 42808251 | ID=MS.gene61132.t1;Parent=MS.gene61132 |
| chr4.4 | exon | 42819369 | 42819431 | 42819369 | ID=MS.gene61132.t1.exon1;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42819369 | 42819431 | 42819369 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42819150 | 42819275 | 42819150 | ID=MS.gene61132.t1.exon2;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42819150 | 42819275 | 42819150 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42818914 | 42819072 | 42818914 | ID=MS.gene61132.t1.exon3;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42818914 | 42819072 | 42818914 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42818534 | 42818617 | 42818534 | ID=MS.gene61132.t1.exon4;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42818534 | 42818617 | 42818534 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42818306 | 42818434 | 42818306 | ID=MS.gene61132.t1.exon5;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42818306 | 42818434 | 42818306 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42817717 | 42817935 | 42817717 | ID=MS.gene61132.t1.exon6;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42817717 | 42817935 | 42817717 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42815693 | 42815818 | 42815693 | ID=MS.gene61132.t1.exon7;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42815693 | 42815818 | 42815693 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42815294 | 42815389 | 42815294 | ID=MS.gene61132.t1.exon8;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42815294 | 42815389 | 42815294 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42814037 | 42814195 | 42814037 | ID=MS.gene61132.t1.exon9;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42814037 | 42814195 | 42814037 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42813302 | 42813593 | 42813302 | ID=MS.gene61132.t1.exon10;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42813302 | 42813593 | 42813302 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42813066 | 42813191 | 42813066 | ID=MS.gene61132.t1.exon11;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42813066 | 42813191 | 42813066 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42812917 | 42812986 | 42812917 | ID=MS.gene61132.t1.exon12;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42812917 | 42812986 | 42812917 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42810026 | 42810089 | 42810026 | ID=MS.gene61132.t1.exon13;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42810026 | 42810089 | 42810026 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42808971 | 42809621 | 42808971 | ID=MS.gene61132.t1.exon14;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42808971 | 42809621 | 42808971 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42808858 | 42808892 | 42808858 | ID=MS.gene61132.t1.exon15;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42808858 | 42808892 | 42808858 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42808630 | 42808736 | 42808630 | ID=MS.gene61132.t1.exon16;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42808630 | 42808736 | 42808630 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| chr4.4 | exon | 42808251 | 42808546 | 42808251 | ID=MS.gene61132.t1.exon17;Parent=MS.gene61132.t1 |
| chr4.4 | CDS | 42808251 | 42808546 | 42808251 | ID=cds.MS.gene61132.t1;Parent=MS.gene61132.t1 |
| Gene Sequence |
| Protein sequence |
