AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61137

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61137.t1 MTR_1g097690 90.035 572 8 4 1 571 16 539 0.0 1026
MS.gene61137.t1 MTR_1g097690 89.205 528 8 4 1 527 16 495 0.0 934
MS.gene61137.t1 MTR_6g042240 64.000 575 173 5 2 571 25 570 0.0 678
MS.gene61137.t1 MTR_6g042240 64.000 575 173 5 2 571 12 557 0.0 678
MS.gene61137.t1 MTR_6g042240 64.218 531 157 4 46 571 15 517 0.0 659
MS.gene61137.t1 MTR_4g098850 38.151 595 241 13 2 571 289 781 1.46e-117 368
MS.gene61137.t1 MTR_4g098850 52.027 148 68 2 427 571 2 149 1.34e-44 169
MS.gene61137.t1 MTR_5g014090 39.629 593 289 17 2 571 12 558 1.66e-116 359
MS.gene61137.t1 MTR_5g014090 36.396 555 279 15 2 532 12 516 3.28e-96 303
MS.gene61137.t1 MTR_1g071680 53.555 211 92 3 367 571 272 482 1.05e-70 237
MS.gene61137.t1 MTR_1g071680 32.597 181 101 4 3 176 13 179 3.21e-20 94.7
MS.gene61137.t1 MTR_5g006820 57.071 198 79 3 380 571 351 548 2.38e-70 238
MS.gene61137.t1 MTR_5g006820 33.908 174 102 2 7 176 17 181 1.57e-19 92.8
MS.gene61137.t1 MTR_1g103330 55.330 197 82 3 381 571 313 509 1.87e-69 234
MS.gene61137.t1 MTR_1g103330 32.584 178 105 3 3 176 13 179 4.51e-20 94.4
MS.gene61137.t1 MTR_7g095260 53.500 200 87 3 378 571 231 430 1.68e-67 227
MS.gene61137.t1 MTR_7g095260 40.708 113 67 0 64 176 15 127 4.62e-19 90.9
MS.gene61137.t1 MTR_7g095260 54.315 197 84 3 381 571 286 482 4.83e-67 228
MS.gene61137.t1 MTR_7g095260 35.632 174 104 2 3 176 14 179 2.90e-22 101
MS.gene61137.t1 MTR_7g100070 53.158 190 78 4 386 571 174 356 6.35e-64 216
MS.gene61137.t1 MTR_7g100070 47.826 92 47 1 81 171 81 172 1.56e-18 89.0
MS.gene61137.t1 MTR_7g100070 53.158 190 78 4 386 571 175 357 6.37e-64 216
MS.gene61137.t1 MTR_7g100070 34.078 179 92 5 3 171 11 173 1.24e-18 89.4
MS.gene61137.t1 MTR_8g043480 52.041 196 87 3 383 571 45 240 1.81e-63 211
MS.gene61137.t1 MTR_7g100070 53.158 190 78 4 386 571 215 397 2.79e-63 216
MS.gene61137.t1 MTR_7g100070 33.333 180 92 5 3 171 51 213 8.74e-19 90.1
MS.gene61137.t1 MTR_8g043480 52.041 196 87 3 383 571 175 370 3.17e-62 211
MS.gene61137.t1 MTR_8g043480 45.833 72 39 0 87 158 8 79 3.43e-15 78.6
MS.gene61137.t1 MTR_8g043480 52.041 196 87 3 383 571 240 435 5.87e-62 213
MS.gene61137.t1 MTR_8g043480 41.111 90 53 0 69 158 55 144 3.28e-16 82.0
MS.gene61137.t1 MTR_8g091360 50.505 198 92 3 380 571 312 509 1.07e-59 208
MS.gene61137.t1 MTR_8g091360 54.167 72 33 0 87 158 139 210 2.11e-17 85.9
MS.gene61137.t1 MTR_6g072010 48.421 190 94 2 386 571 155 344 1.71e-58 200
MS.gene61137.t1 MTR_6g072010 37.037 135 80 3 48 181 7 137 4.95e-17 83.6
MS.gene61137.t1 MTR_6g072010 48.421 190 94 2 386 571 166 355 2.88e-58 200
MS.gene61137.t1 MTR_6g072010 37.037 135 80 3 48 181 18 148 5.85e-17 83.6
MS.gene61137.t1 MTR_1g038810 51.042 192 88 2 386 571 176 367 3.82e-58 201
MS.gene61137.t1 MTR_1g038810 37.288 118 67 3 43 159 20 131 1.87e-12 70.1
MS.gene61137.t1 MTR_1g038810 51.042 192 88 2 386 571 180 371 4.84e-58 201
MS.gene61137.t1 MTR_1g038810 37.705 122 65 4 43 159 20 135 1.20e-13 73.6
MS.gene61137.t1 MTR_6g009260 47.525 202 96 6 380 571 160 361 2.88e-49 177
MS.gene61137.t1 MTR_6g009260 49.351 77 37 1 84 158 51 127 2.12e-15 79.3
MS.gene61137.t1 MTR_8g091360 49.007 151 74 1 380 527 312 462 1.12e-46 171
MS.gene61137.t1 MTR_8g091360 54.167 72 33 0 87 158 139 210 1.83e-17 85.9
MS.gene61137.t1 MTR_6g092670 31.193 218 120 5 382 571 642 857 2.30e-28 121
MS.gene61137.t1 MTR_1g078100 30.093 216 122 6 381 571 326 537 2.57e-26 114
MS.gene61137.t1 MTR_1g078100 30.093 216 122 6 381 571 606 817 3.08e-26 114
MS.gene61137.t1 MTR_1g078100 30.093 216 122 6 381 571 337 548 3.59e-26 114
MS.gene61137.t1 MTR_1g021730 29.612 206 129 10 371 571 75 269 1.11e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61137.t1 AT1G71710 53.795 606 215 14 2 571 21 597 0.0 579
MS.gene61137.t1 AT1G71710 53.795 606 215 14 2 571 12 588 0.0 578
MS.gene61137.t1 AT1G34120 46.998 583 207 11 3 571 30 524 7.04e-159 466
MS.gene61137.t1 AT1G34120 46.998 583 211 11 3 571 30 528 1.06e-158 466
MS.gene61137.t1 AT1G34120 48.000 575 216 13 3 571 30 527 5.63e-156 459
MS.gene61137.t1 AT1G34120 45.318 534 191 10 3 523 30 475 5.12e-134 399
MS.gene61137.t1 AT1G34120 48.506 435 155 9 142 571 3 373 1.36e-120 363
MS.gene61137.t1 AT4G18010 53.431 204 92 2 371 571 377 580 7.89e-73 243
MS.gene61137.t1 AT4G18010 53.431 204 92 2 371 571 377 580 3.48e-72 243
MS.gene61137.t1 AT2G32010 56.853 197 79 3 381 571 324 520 4.96e-71 239
MS.gene61137.t1 AT2G32010 42.857 105 59 1 73 176 74 178 2.40e-19 92.4
MS.gene61137.t1 AT2G32010 56.853 197 79 3 381 571 324 520 4.96e-71 239
MS.gene61137.t1 AT2G32010 42.857 105 59 1 73 176 74 178 2.40e-19 92.4
MS.gene61137.t1 AT2G32010 56.853 197 79 3 381 571 324 520 4.96e-71 239
MS.gene61137.t1 AT2G32010 42.857 105 59 1 73 176 74 178 2.40e-19 92.4
MS.gene61137.t1 AT2G32010 56.853 197 79 3 381 571 324 520 4.96e-71 239
MS.gene61137.t1 AT2G32010 42.857 105 59 1 73 176 74 178 2.40e-19 92.4
MS.gene61137.t1 AT3G63240 54.950 202 85 3 376 571 271 472 2.09e-70 236
MS.gene61137.t1 AT3G63240 38.125 160 80 4 3 158 13 157 8.28e-20 93.6
MS.gene61137.t1 AT3G63240 54.950 202 85 3 376 571 271 472 2.09e-70 236
MS.gene61137.t1 AT3G63240 38.125 160 80 4 3 158 13 157 8.28e-20 93.6
MS.gene61137.t1 AT1G05470 56.345 197 80 3 381 571 347 543 2.35e-70 238
MS.gene61137.t1 AT1G05470 34.395 157 94 3 3 158 13 161 4.52e-21 97.8
MS.gene61137.t1 AT1G05470 56.345 197 80 3 381 571 347 543 2.35e-70 238
MS.gene61137.t1 AT1G05470 34.395 157 94 3 3 158 13 161 4.52e-21 97.8
MS.gene61137.t1 AT5G65090 50.962 208 96 3 370 571 186 393 1.36e-64 219
MS.gene61137.t1 AT5G65090 49.315 73 37 0 87 159 8 80 2.10e-17 85.5
MS.gene61137.t1 AT5G65090 50.962 208 96 3 370 571 249 456 3.40e-64 219
MS.gene61137.t1 AT5G65090 49.315 73 37 0 87 159 71 143 2.49e-17 85.5
MS.gene61137.t1 AT5G65090 50.962 208 96 3 370 571 249 456 3.40e-64 219
MS.gene61137.t1 AT5G65090 49.315 73 37 0 87 159 71 143 2.49e-17 85.5
MS.gene61137.t1 AT2G37440 54.639 194 82 4 382 571 112 303 3.07e-63 213
MS.gene61137.t1 AT2G37440 42.857 112 36 3 93 181 3 109 3.72e-14 75.1
MS.gene61137.t1 AT2G37440 54.639 194 82 4 382 571 193 384 9.29e-63 214
MS.gene61137.t1 AT2G37440 48.571 105 51 2 85 186 79 183 5.46e-19 90.5
MS.gene61137.t1 AT2G37440 54.639 194 82 4 382 571 193 384 9.29e-63 214
MS.gene61137.t1 AT2G37440 48.571 105 51 2 85 186 79 183 5.46e-19 90.5
MS.gene61137.t1 AT5G04980 47.115 208 103 3 371 571 145 352 2.00e-59 203
MS.gene61137.t1 AT5G04980 47.115 208 103 3 371 571 180 387 8.97e-59 202
MS.gene61137.t1 AT5G04980 47.826 69 36 0 87 155 7 75 3.26e-14 75.5
MS.gene61137.t1 AT5G04980 47.115 208 103 3 371 571 180 387 8.97e-59 202
MS.gene61137.t1 AT5G04980 47.826 69 36 0 87 155 7 75 3.26e-14 75.5
MS.gene61137.t1 AT5G04980 47.115 208 103 3 371 571 209 416 9.91e-59 203
MS.gene61137.t1 AT5G04980 47.826 69 36 0 87 155 36 104 3.12e-14 75.9
MS.gene61137.t1 AT2G01900 55.114 176 78 1 386 560 155 330 2.36e-58 201
MS.gene61137.t1 AT2G01900 37.500 120 67 3 54 172 29 141 1.17e-14 76.6
MS.gene61137.t1 AT2G01900 55.114 176 78 1 386 560 163 338 3.35e-58 201
MS.gene61137.t1 AT2G01900 37.500 120 67 3 54 172 37 149 1.17e-14 76.6
MS.gene61137.t1 AT2G01900 53.714 175 73 1 386 560 155 321 1.04e-55 193
MS.gene61137.t1 AT2G01900 37.500 120 67 3 54 172 29 141 1.27e-14 76.6
MS.gene61137.t1 AT1G65580 32.420 219 118 6 381 571 351 567 9.63e-30 125
MS.gene61137.t1 AT1G65580 32.420 219 118 6 381 571 617 833 1.12e-29 125
MS.gene61137.t1 AT1G05630 30.455 220 123 5 380 571 649 866 5.54e-28 120
MS.gene61137.t1 AT1G05630 30.455 220 123 5 380 571 649 866 7.54e-28 119
MS.gene61137.t1 AT2G43900 30.000 220 124 5 380 571 655 872 8.20e-28 119
MS.gene61137.t1 AT2G43900 30.000 220 124 5 380 571 655 872 8.26e-28 119
MS.gene61137.t1 AT2G31830 30.455 220 123 4 380 571 658 875 1.22e-27 119
MS.gene61137.t1 AT2G31830 31.818 220 120 5 380 571 658 875 1.32e-27 119
MS.gene61137.t1 AT2G31830 31.818 220 120 5 380 571 658 875 1.92e-27 118
MS.gene61137.t1 AT1G47510 35.260 173 93 7 402 571 69 225 1.59e-19 89.4
MS.gene61137.t1 AT1G47510 35.260 173 93 7 402 571 131 287 4.36e-19 89.4
MS.gene61137.t1 AT1G05630 44.578 83 44 2 491 571 818 900 1.16e-12 71.6
MS.gene61137.t1 AT1G47510 46.835 79 37 3 495 571 149 224 7.92e-11 63.5

Find 108 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTTGTTTATAGAATTTA+TGG 0.063950 1.4:+76084016 None:intergenic
GGTGAAGAACATAATTTATT+TGG 0.142900 1.4:+76085665 MS.gene61137:CDS
TGAATTAATCTCGTACTTAT+AGG 0.195385 1.4:-76087556 None:intergenic
TCATTGTCTGAATCAGTTTC+AGG 0.208520 1.4:-76084138 None:intergenic
AAAATGTTACTCGTGTTTAA+AGG 0.232239 1.4:-76085434 None:intergenic
AACTGTTGGTGTTGGTGTTA+TGG 0.238835 1.4:+76086285 MS.gene61137:CDS
AGAATTTCTTCTTCTATATC+TGG 0.254254 1.4:-76085599 None:intergenic
GCAAATGGCTTAACATTAAA+AGG 0.260784 1.4:+76084055 MS.gene61137:CDS
ACTGTTGGTGTTGGTGTTAT+GGG 0.280728 1.4:+76086286 MS.gene61137:CDS
TCTGATGGTTTAAACTTTGA+TGG 0.282944 1.4:-76085569 None:intergenic
TTATTTGCAGAAGAATAATT+TGG 0.290513 1.4:+76086949 MS.gene61137:intron
AACAGATGCTATAGATTTAC+TGG 0.299403 1.4:+76086120 MS.gene61137:CDS
GGTGTACGCCTCGCAACCTT+TGG 0.301674 1.4:-76087600 None:intergenic
GGGGAAGCCGGTCACGGATT+AGG 0.306749 1.4:+76084429 MS.gene61137:CDS
CTCATGATCCAAGATACTTT+TGG 0.312592 1.4:-76086639 None:intergenic
CAGAATTTCTCCCAGGCTTA+AGG 0.327355 1.4:+76084785 MS.gene61137:intron
CTTATCAAAGAAGGTTGAAT+AGG 0.329509 1.4:+76085786 MS.gene61137:CDS
AAGCTATCTAGAATGATTAA+TGG 0.329819 1.4:+76085875 MS.gene61137:CDS
GGGAAGCCGGTCACGGATTA+GGG 0.338322 1.4:+76084430 MS.gene61137:CDS
GGTGAGGAGATTCATCCTTT+AGG 0.342847 1.4:+76085644 MS.gene61137:CDS
TGGACTTCCCAAAAGTATCT+TGG 0.350599 1.4:+76086631 MS.gene61137:CDS
GTTGGTGTTATGGGCTATAT+TGG 0.372990 1.4:+76086295 MS.gene61137:CDS
TTCAGTGCTTCATCTATGAT+TGG 0.386944 1.4:-76085701 None:intergenic
CAACAATGGTCATGCGCAAA+TGG 0.392807 1.4:+76084040 MS.gene61137:CDS
AGCACTGAATATTAGTTTGA+AGG 0.396504 1.4:+76085715 MS.gene61137:CDS
TTAGAAAGCGATAGTGATAT+TGG 0.406935 1.4:+76085623 MS.gene61137:CDS
ATGACTTTGATATTGATGAT+TGG 0.413325 1.4:+76085000 MS.gene61137:CDS
GTCTTATTAAACGATTTAAC+CGG 0.414616 1.4:-76086061 None:intergenic
AGCTATCTAGAATGATTAAT+GGG 0.418456 1.4:+76085876 MS.gene61137:CDS
ATCAGTTATCTTATCAAAGA+AGG 0.426818 1.4:+76085777 MS.gene61137:CDS
GTGTACGCCTCGCAACCTTT+GGG 0.433772 1.4:-76087599 None:intergenic
GTTAGTGGGACTGAAAGAAT+TGG 0.433816 1.4:+76085968 MS.gene61137:CDS
TTTGTTGCCTCAGAAAGTAT+TGG 0.436972 1.4:+76086018 MS.gene61137:CDS
TCTTTGTTTATAGAATTTAT+GGG 0.438492 1.4:+76084017 None:intergenic
TACTCGTCCTGTACCGAAAT+GGG 0.439941 1.4:+76085469 MS.gene61137:CDS
TGCAGAAGAATAATTTGGTT+CGG 0.440082 1.4:+76086954 MS.gene61137:intron
CCAGCTGATATCTATGTCCT+TGG 0.444776 1.4:+76085038 MS.gene61137:CDS
AACAAATGTAATGGTGGCTC+TGG 0.447550 1.4:-76086001 None:intergenic
TCATCAATATCAAAGTCATT+AGG 0.451910 1.4:-76084996 None:intergenic
TTTCTATTAGAGTATGTGTT+GGG 0.452675 1.4:+76084946 MS.gene61137:intron
CCACCTTACGGCAGGTGAAA+AGG 0.453682 1.4:+76086532 MS.gene61137:CDS
ATACTCGTCCTGTACCGAAA+TGG 0.454190 1.4:+76085468 MS.gene61137:CDS
AAATTATGTTCTTCACCTAA+AGG 0.459993 1.4:-76085659 None:intergenic
GGCAAAAGTCATTGACTGTA+AGG 0.470476 1.4:+76084809 MS.gene61137:CDS
ATCTTGAAGCTTTGATGAAG+AGG 0.470630 1.4:+76086152 MS.gene61137:CDS
AGCATTTCGTTTGATTTCAT+CGG 0.472148 1.4:-76086558 None:intergenic
CTTTATATGCACCCACCTTA+CGG 0.476641 1.4:+76086520 MS.gene61137:CDS
GGTTTAAACTTTGATGGAGA+TGG 0.477628 1.4:-76085563 None:intergenic
ATATCTGGTGCATCATCTGA+TGG 0.479222 1.4:-76085584 None:intergenic
ATCTCGTACTTATAGGTTGG+TGG 0.485679 1.4:-76087549 None:intergenic
GATTAGTAAGCTATCTAGAA+TGG 0.486586 1.4:+76085946 MS.gene61137:CDS
TATCATATGGCAAGCTGATA+CGG 0.487049 1.4:-76086989 None:intergenic
TTAACCGGTTTAAAATAAGT+TGG 0.497526 1.4:-76086046 None:intergenic
CTGAAAGAATTGGTTTGAGC+TGG 0.499133 1.4:+76085978 MS.gene61137:CDS
AACATGAAGGTTTCAACTGT+TGG 0.500406 1.4:+76086271 MS.gene61137:CDS
CCAAGGACATAGATATCAGC+TGG 0.505077 1.4:-76085038 None:intergenic
CAGCTGATATCTATGTCCTT+GGG 0.506582 1.4:+76085039 MS.gene61137:CDS
CAGGAGAGAGGATGAAGCTC+CGG 0.509164 1.4:+76084454 MS.gene61137:CDS
TCCTGTCCCTAATCCGTGAC+CGG 0.513210 1.4:-76084436 None:intergenic
AAGGTTTCAACTGTTGGTGT+TGG 0.514208 1.4:+76086277 MS.gene61137:CDS
TTAATCTCGTACTTATAGGT+TGG 0.517794 1.4:-76087552 None:intergenic
TTCTGAGGCAACAAATGTAA+TGG 0.523939 1.4:-76086010 None:intergenic
TGAACTGCAGAATTTCTCCC+AGG 0.530982 1.4:+76084778 MS.gene61137:intron
GCCGGTCACGGATTAGGGAC+AGG 0.536950 1.4:+76084435 MS.gene61137:CDS
TTAGAGTATGTGTTGGGACA+TGG 0.539774 1.4:+76084952 MS.gene61137:intron
ATTAATTCAGACAAGTACAT+TGG 0.541947 1.4:+76087570 MS.gene61137:CDS
TGTTCTGAATATGTTTCCGC+AGG 0.543544 1.4:-76086252 None:intergenic
CAGAGTGGGGAAGCCGGTCA+CGG 0.545381 1.4:+76084423 MS.gene61137:intron
TCATCACGGTATGGGTTCGA+AGG 0.552651 1.4:+76086227 MS.gene61137:CDS
CTTGTGAAAGAATTAGAGAA+AGG 0.553223 1.4:+76087489 MS.gene61137:CDS
TGTGTTGGGACATGGAATGT+TGG 0.555711 1.4:+76084960 MS.gene61137:CDS
TCTCGTACTTATAGGTTGGT+GGG 0.555840 1.4:-76087548 None:intergenic
TGGAGATGGAGGATCACTAA+AGG 0.558217 1.4:-76085549 None:intergenic
GAAACATATTCAGAACATGA+AGG 0.559314 1.4:+76086258 MS.gene61137:CDS
ATAGAATTTATGGGCAACAA+TGG 0.563404 1.4:+76084026 None:intergenic
AAGCTATCTAGAATGGTTAG+TGG 0.565033 1.4:+76085953 MS.gene61137:CDS
ATATGCACCCACCTTACGGC+AGG 0.566040 1.4:+76086524 MS.gene61137:CDS
GAAACTGATTCAGACAATGA+AGG 0.567354 1.4:+76084141 MS.gene61137:CDS
ATGGCTTAACATTAAAAGGA+AGG 0.567804 1.4:+76084059 MS.gene61137:CDS
TTAAACTTTGATGGAGATGG+AGG 0.571133 1.4:-76085560 None:intergenic
TAGTCACCATCTGATTCAGC+CGG 0.571583 1.4:-76084473 None:intergenic
AGCTATCTAGAATGGTTAGT+GGG 0.573263 1.4:+76085954 MS.gene61137:CDS
GGTCTCTCCAATACTTTCTG+AGG 0.576164 1.4:-76086025 None:intergenic
TTTCCGCGAGGAAGATTCAT+CGG 0.585056 1.4:+76085817 MS.gene61137:CDS
ATTGTGCAGAGTGGGGAAGC+CGG 0.586219 1.4:+76084417 MS.gene61137:intron
TCAATATCAAAGTCATTAGG+TGG 0.586310 1.4:-76084993 None:intergenic
GTCTCAATATATAAACAAGA+AGG 0.590829 1.4:+76084831 MS.gene61137:CDS
GAAGCTCCGGCTGAATCAGA+TGG 0.599862 1.4:+76084467 MS.gene61137:CDS
CAAACTAAAGCATACCATGC+TGG 0.608342 1.4:-76087621 None:intergenic
ATAGTGAGCAAGCAGATGGT+TGG 0.609242 1.4:+76086199 MS.gene61137:CDS
GTTGGGACATGGAATGTTGG+AGG 0.610467 1.4:+76084963 MS.gene61137:CDS
AAGCGATAGTGATATTGGTG+AGG 0.614723 1.4:+76085628 MS.gene61137:CDS
GGACATAGATATCAGCTGGA+TGG 0.616159 1.4:-76085034 None:intergenic
AATTTCTCCCAGGCTTAAGG+AGG 0.618284 1.4:+76084788 MS.gene61137:CDS
ACGGATTAGGGACAGGAGAG+AGG 0.618825 1.4:+76084442 MS.gene61137:CDS
TATGGGCTATATTGGTAACA+AGG 0.624421 1.4:+76086303 MS.gene61137:CDS
TTCAGACAAGTACATTGGAG+AGG 0.633311 1.4:+76087575 MS.gene61137:CDS
GAGAGGACCCAAAGGTTGCG+AGG 0.634911 1.4:+76087592 MS.gene61137:CDS
TGAGGCAACAAATGTAATGG+TGG 0.637973 1.4:-76086007 None:intergenic
TTGCGAGGCGTACACCAGCA+TGG 0.653553 1.4:+76087607 MS.gene61137:CDS
TATGGGTTCGAAGGAGCCTG+CGG 0.674551 1.4:+76086236 MS.gene61137:CDS
GTACATTGGAGAGGACCCAA+AGG 0.674845 1.4:+76087584 MS.gene61137:CDS
GAAGATAGTGAGCAAGCAGA+TGG 0.678985 1.4:+76086195 MS.gene61137:CDS
ATGTTCGTGAAATACATCAG+AGG 0.682749 1.4:+76086582 MS.gene61137:CDS
AAAATTGGTTGAGAGAGACC+AGG 0.701785 1.4:+76087046 MS.gene61137:CDS
ATATAAACAAGAAGGAACTG+AGG 0.702635 1.4:+76084839 MS.gene61137:CDS
TTTCCGATGAATCTTCCTCG+CGG 0.752096 1.4:-76085820 None:intergenic
TAGGCTAAATCATTTCCGCG+AGG 0.776950 1.4:+76085805 MS.gene61137:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTGTAATTAATAAAACAT+TGG + chr1.4:76084186-76084205 MS.gene61137:intron 10.0%
!!! CACTTTTTTTTTTTTTTTTA+TGG + chr1.4:76085152-76085171 MS.gene61137:intron 10.0%
!! TAAATTAACATATTTGAATG+TGG - chr1.4:76086684-76086703 None:intergenic 15.0%
!! TATTAAAAGTGATTTCAAAA+TGG - chr1.4:76085116-76085135 None:intergenic 15.0%
!! TTCTAATTTAATCATATAGA+AGG - chr1.4:76086819-76086838 None:intergenic 15.0%
!!! CATTTTTCGATTTAAATTTA+GGG - chr1.4:76084665-76084684 None:intergenic 15.0%
!!! TTACCTTAATTTTAATCAAA+AGG - chr1.4:76086735-76086754 None:intergenic 15.0%
!! AATCAGAAAGTGAATAAAAA+TGG - chr1.4:76086610-76086629 None:intergenic 20.0%
!! ATCAGAAAGTGAATAAAAAT+GGG - chr1.4:76086609-76086628 None:intergenic 20.0%
!! CCTAAATTTAAATCGAAAAA+TGG + chr1.4:76084663-76084682 MS.gene61137:intron 20.0%
!! GATTAATTTACTTCAATAGA+AGG - chr1.4:76086842-76086861 None:intergenic 20.0%
!! TCATGAAATCAAAATGAATA+AGG - chr1.4:76087415-76087434 None:intergenic 20.0%
!! TTATTTGCAGAAGAATAATT+TGG + chr1.4:76086949-76086968 MS.gene61137:intron 20.0%
!!! AAAGTGTTTTTATATACACT+TGG + chr1.4:76085342-76085361 MS.gene61137:intron 20.0%
!!! ATGCCTTTTGATTAAAATTA+AGG + chr1.4:76086729-76086748 MS.gene61137:intron 20.0%
!!! ATTTTGAACTCAAGTTAAAA+GGG + chr1.4:76087440-76087459 MS.gene61137:intron 20.0%
!!! CCATTTTTCGATTTAAATTT+AGG - chr1.4:76084666-76084685 None:intergenic 20.0%
!!! TTTTATTCACTTTCTGATTT+TGG + chr1.4:76086611-76086630 MS.gene61137:CDS 20.0%
! AAAATGTTACTCGTGTTTAA+AGG - chr1.4:76085437-76085456 None:intergenic 25.0%
! AAATTATGTTCTTCACCTAA+AGG - chr1.4:76085662-76085681 None:intergenic 25.0%
! AACAATGTCTTGAATTTACA+TGG + chr1.4:76086763-76086782 MS.gene61137:intron 25.0%
! AACATAGATAATCGTGTTTA+AGG + chr1.4:76087364-76087383 MS.gene61137:intron 25.0%
! ACATAGATAATCGTGTTTAA+GGG + chr1.4:76087365-76087384 MS.gene61137:intron 25.0%
! ACGGAACATATATTTCTTAA+TGG - chr1.4:76087195-76087214 None:intergenic 25.0%
! AGAATTTCTTCTTCTATATC+TGG - chr1.4:76085602-76085621 None:intergenic 25.0%
! ATCAGTTATCTTATCAAAGA+AGG + chr1.4:76085777-76085796 MS.gene61137:CDS 25.0%
! ATTAATTCAGACAAGTACAT+TGG + chr1.4:76087570-76087589 MS.gene61137:CDS 25.0%
! ATTTGAAGATTTGGAAATTG+AGG + chr1.4:76084249-76084268 MS.gene61137:intron 25.0%
! CGATTATCTATGTTACAAAA+TGG - chr1.4:76087358-76087377 None:intergenic 25.0%
! GGTGAAGAACATAATTTATT+TGG + chr1.4:76085665-76085684 MS.gene61137:CDS 25.0%
! GTCTCAATATATAAACAAGA+AGG + chr1.4:76084831-76084850 MS.gene61137:CDS 25.0%
! TCATCAATATCAAAGTCATT+AGG - chr1.4:76084999-76085018 None:intergenic 25.0%
! TGAATTAATCTCGTACTTAT+AGG - chr1.4:76087559-76087578 None:intergenic 25.0%
! TGCATATACACTCAAATATA+AGG + chr1.4:76085090-76085109 MS.gene61137:intron 25.0%
! TTTCTATTAGAGTATGTGTT+GGG + chr1.4:76084946-76084965 MS.gene61137:intron 25.0%
!! AAGCTATCTAGAATGATTAA+TGG + chr1.4:76085875-76085894 MS.gene61137:CDS 25.0%
!! AGCTATCTAGAATGATTAAT+GGG + chr1.4:76085876-76085895 MS.gene61137:CDS 25.0%
!! ATCTTATCTCAAAAAAGCAT+TGG + chr1.4:76087021-76087040 MS.gene61137:CDS 25.0%
!! ATGACTTTGATATTGATGAT+TGG + chr1.4:76085000-76085019 MS.gene61137:CDS 25.0%
!! CTAAAGGATTTTATCTTTGA+AGG - chr1.4:76085536-76085555 None:intergenic 25.0%
!! GATTTTGAACTCAAGTTAAA+AGG + chr1.4:76087439-76087458 MS.gene61137:intron 25.0%
!! GTCTTATTAAACGATTTAAC+CGG - chr1.4:76086064-76086083 None:intergenic 25.0%
!! TGATCTGTCTCAATTTTATT+TGG + chr1.4:76084390-76084409 MS.gene61137:intron 25.0%
!! TTAACCGGTTTAAAATAAGT+TGG - chr1.4:76086049-76086068 None:intergenic 25.0%
!! TTGACAATTTTTCCTGTATT+AGG + chr1.4:76084619-76084638 MS.gene61137:intron 25.0%
!! TTTTCTATTAGAGTATGTGT+TGG + chr1.4:76084945-76084964 MS.gene61137:intron 25.0%
!!! AAAAAAGCATTGGTCAAAAT+TGG + chr1.4:76087031-76087050 MS.gene61137:CDS 25.0%
!!! AGATCTCTTGTTTTATCATA+TGG - chr1.4:76087005-76087024 None:intergenic 25.0%
!!! GATCTGTCTCAATTTTATTT+GGG + chr1.4:76084391-76084410 MS.gene61137:intron 25.0%
!!! TATCAAGTTGATACATCTAA+TGG - chr1.4:76087084-76087103 None:intergenic 25.0%
!!! TTATTGATGTCTTATTTCTG+AGG + chr1.4:76087154-76087173 MS.gene61137:intron 25.0%
!!! TTTTGATTTGAAAGAATCAC+AGG - chr1.4:76086101-76086120 None:intergenic 25.0%
AACAGATGCTATAGATTTAC+TGG + chr1.4:76086120-76086139 MS.gene61137:CDS 30.0%
ACCAAAAACTACAAACTCTA+GGG - chr1.4:76086354-76086373 None:intergenic 30.0%
AGGCATTAGCATATAATTCA+AGG - chr1.4:76086715-76086734 None:intergenic 30.0%
ATAATCGTGTTTAAGGGTTT+AGG + chr1.4:76087371-76087390 MS.gene61137:intron 30.0%
ATATAAACAAGAAGGAACTG+AGG + chr1.4:76084839-76084858 MS.gene61137:CDS 30.0%
ATGGCTTAACATTAAAAGGA+AGG + chr1.4:76084059-76084078 MS.gene61137:CDS 30.0%
ATTAGGCCATTCAAAATTTG+TGG + chr1.4:76084636-76084655 MS.gene61137:intron 30.0%
CGACTATTCATTTGAAGATT+TGG + chr1.4:76084240-76084259 MS.gene61137:intron 30.0%
CTTATCAAAGAAGGTTGAAT+AGG + chr1.4:76085786-76085805 MS.gene61137:CDS 30.0%
CTTGTGAAAGAATTAGAGAA+AGG + chr1.4:76087489-76087508 MS.gene61137:CDS 30.0%
GAAACATATTCAGAACATGA+AGG + chr1.4:76086258-76086277 MS.gene61137:CDS 30.0%
GATTAGTAAGCTATCTAGAA+TGG + chr1.4:76085868-76085887 MS.gene61137:CDS 30.0%
GATTTGGAAATTGAGGATTA+TGG + chr1.4:76084256-76084275 MS.gene61137:intron 30.0%
GCAAATGGCTTAACATTAAA+AGG + chr1.4:76084055-76084074 MS.gene61137:CDS 30.0%
TAATCGTGTTTAAGGGTTTA+GGG + chr1.4:76087372-76087391 MS.gene61137:intron 30.0%
TCAATATCAAAGTCATTAGG+TGG - chr1.4:76084996-76085015 None:intergenic 30.0%
TCTGATGGTTTAAACTTTGA+TGG - chr1.4:76085572-76085591 None:intergenic 30.0%
TGCAGAAGAATAATTTGGTT+CGG + chr1.4:76086954-76086973 MS.gene61137:intron 30.0%
TTAATCTCGTACTTATAGGT+TGG - chr1.4:76087555-76087574 None:intergenic 30.0%
TTAGAAAGCGATAGTGATAT+TGG + chr1.4:76085623-76085642 MS.gene61137:CDS 30.0%
! AACTCTAGGGAAAATTTCAA+AGG - chr1.4:76086341-76086360 None:intergenic 30.0%
! AATTTTGAATGGCCTAATAC+AGG - chr1.4:76084634-76084653 None:intergenic 30.0%
! AGCACTGAATATTAGTTTGA+AGG + chr1.4:76085715-76085734 MS.gene61137:CDS 30.0%
! AGCATTTCGTTTGATTTCAT+CGG - chr1.4:76086561-76086580 None:intergenic 30.0%
! AGTTGATACATCTAATGGAA+GGG - chr1.4:76087079-76087098 None:intergenic 30.0%
! CGAATTAAGTTTTCCCATTT+CGG - chr1.4:76085485-76085504 None:intergenic 30.0%
! TCATGATCCAAGATACTTTT+GGG - chr1.4:76086641-76086660 None:intergenic 30.0%
!! AAGTTGATACATCTAATGGA+AGG - chr1.4:76087080-76087099 None:intergenic 30.0%
!! GTGTTTTTATATACACTTGG+TGG + chr1.4:76085345-76085364 MS.gene61137:intron 30.0%
!!! GAGACCAACTTATTTTAAAC+CGG + chr1.4:76086042-76086061 MS.gene61137:CDS 30.0%
!!! TTAGAGAAAGGTGTTTTTGA+TGG + chr1.4:76087501-76087520 MS.gene61137:CDS 30.0%
AACATGAAGGTTTCAACTGT+TGG + chr1.4:76086271-76086290 MS.gene61137:CDS 35.0%
AATGATGTATCACCATCCAA+CGG - chr1.4:76084571-76084590 None:intergenic 35.0%
ATGTTCGTGAAATACATCAG+AGG + chr1.4:76086582-76086601 MS.gene61137:CDS 35.0%
CATCATCATCATCATCATCA+GGG - chr1.4:76084107-76084126 None:intergenic 35.0%
GACCAAAAACTACAAACTCT+AGG - chr1.4:76086355-76086374 None:intergenic 35.0%
GGTTTAAACTTTGATGGAGA+TGG - chr1.4:76085566-76085585 None:intergenic 35.0%
TATCATATGGCAAGCTGATA+CGG - chr1.4:76086992-76087011 None:intergenic 35.0%
TCATCATCATCATCATCATC+AGG - chr1.4:76084108-76084127 None:intergenic 35.0%
TCATTGTCTGAATCAGTTTC+AGG - chr1.4:76084141-76084160 None:intergenic 35.0%
TCGATGAATTTACTGAGTGA+CGG - chr1.4:76087214-76087233 None:intergenic 35.0%
TGCTGAAATTCTGTATTCAC+TGG + chr1.4:76086885-76086904 MS.gene61137:intron 35.0%
TGGGACTGAAAAAGATTCAT+CGG + chr1.4:76085895-76085914 MS.gene61137:CDS 35.0%
TGTGTGATGAATGATGATTC+TGG + chr1.4:76084348-76084367 MS.gene61137:intron 35.0%
TTAAACTTTGATGGAGATGG+AGG - chr1.4:76085563-76085582 None:intergenic 35.0%
TTCAGTGCTTCATCTATGAT+TGG - chr1.4:76085704-76085723 None:intergenic 35.0%
TTTAGTGTGAAACTTACCCA+AGG - chr1.4:76085058-76085077 None:intergenic 35.0%
! AAGCTATCTAGAATGGTTAG+TGG + chr1.4:76085953-76085972 MS.gene61137:CDS 35.0%
! AGCTATCTAGAATGGTTAGT+GGG + chr1.4:76085954-76085973 MS.gene61137:CDS 35.0%
! ATCTTGAAGCTTTGATGAAG+AGG + chr1.4:76086152-76086171 MS.gene61137:CDS 35.0%
! CTCATGATCCAAGATACTTT+TGG - chr1.4:76086642-76086661 None:intergenic 35.0%
! GAAACTGATTCAGACAATGA+AGG + chr1.4:76084141-76084160 MS.gene61137:CDS 35.0%
! GGGAATCCACAAATTTTGAA+TGG - chr1.4:76084645-76084664 None:intergenic 35.0%
! TAATGGAAGGGTATATTACC+TGG - chr1.4:76087067-76087086 None:intergenic 35.0%
! TATGGGCTATATTGGTAACA+AGG + chr1.4:76086303-76086322 MS.gene61137:CDS 35.0%
! TCCCTAGAGTTTGTAGTTTT+TGG + chr1.4:76086350-76086369 MS.gene61137:intron 35.0%
! TGATGATGATGATGATGATG+AGG + chr1.4:76084107-76084126 MS.gene61137:CDS 35.0%
! TGGTATTTTCATCACGGTAT+GGG + chr1.4:76086219-76086238 MS.gene61137:CDS 35.0%
! TTGGTATTTTCATCACGGTA+TGG + chr1.4:76086218-76086237 MS.gene61137:CDS 35.0%
! TTTGTTGCCTCAGAAAGTAT+TGG + chr1.4:76086018-76086037 MS.gene61137:CDS 35.0%
!! ATGATGATTCTGGTTCAGTT+TGG + chr1.4:76084358-76084377 MS.gene61137:intron 35.0%
!! GATGGTTGGTATTTTCATCA+CGG + chr1.4:76086213-76086232 MS.gene61137:CDS 35.0%
!! TTCTGAGGCAACAAATGTAA+TGG - chr1.4:76086013-76086032 None:intergenic 35.0%
!!! AGAAAGGTGTTTTTGATGGA+TGG + chr1.4:76087505-76087524 MS.gene61137:CDS 35.0%
AAAATTGGTTGAGAGAGACC+AGG + chr1.4:76087046-76087065 MS.gene61137:CDS 40.0%
AACAAATGTAATGGTGGCTC+TGG - chr1.4:76086004-76086023 None:intergenic 40.0%
AACAAGAAGGAACTGAGGTT+AGG + chr1.4:76084844-76084863 MS.gene61137:intron 40.0%
AAGCGATAGTGATATTGGTG+AGG + chr1.4:76085628-76085647 MS.gene61137:CDS 40.0%
AAGGTTTCAACTGTTGGTGT+TGG + chr1.4:76086277-76086296 MS.gene61137:CDS 40.0%
ACTAGTATAATGCCGTTGGA+TGG + chr1.4:76084556-76084575 MS.gene61137:intron 40.0%
ATAGTCGTCTGCTAATGACA+CGG - chr1.4:76084227-76084246 None:intergenic 40.0%
ATATCTGGTGCATCATCTGA+TGG - chr1.4:76085587-76085606 None:intergenic 40.0%
ATCATCATCATCATCAGGGT+CGG - chr1.4:76084103-76084122 None:intergenic 40.0%
CAAGACTAGTATAATGCCGT+TGG + chr1.4:76084552-76084571 MS.gene61137:intron 40.0%
CAGCAGAATTCAGATATGAG+AGG - chr1.4:76084920-76084939 None:intergenic 40.0%
CAGCTGATATCTATGTCCTT+GGG + chr1.4:76085039-76085058 MS.gene61137:CDS 40.0%
CATTCATCACACACAAGACA+TGG - chr1.4:76084341-76084360 None:intergenic 40.0%
CTTTATATGCACCCACCTTA+CGG + chr1.4:76086520-76086539 MS.gene61137:CDS 40.0%
GCTCTCAAAAGTCGAATATG+AGG - chr1.4:76084691-76084710 None:intergenic 40.0%
GTTAGTGGGACTGAAAGAAT+TGG + chr1.4:76085968-76085987 MS.gene61137:CDS 40.0%
TGAGGCAACAAATGTAATGG+TGG - chr1.4:76086010-76086029 None:intergenic 40.0%
TTAGAGTATGTGTTGGGACA+TGG + chr1.4:76084952-76084971 MS.gene61137:intron 40.0%
TTCAGACAAGTACATTGGAG+AGG + chr1.4:76087575-76087594 MS.gene61137:CDS 40.0%
! AAGTTTTCCCATTTCGGTAC+AGG - chr1.4:76085479-76085498 None:intergenic 40.0%
! ATCTCGTACTTATAGGTTGG+TGG - chr1.4:76087552-76087571 None:intergenic 40.0%
! GGCAAAAGTCATTGACTGTA+AGG + chr1.4:76084809-76084828 MS.gene61137:CDS 40.0%
! TGTTCTGAATATGTTTCCGC+AGG - chr1.4:76086255-76086274 None:intergenic 40.0%
!! AACTGTTGGTGTTGGTGTTA+TGG + chr1.4:76086285-76086304 MS.gene61137:CDS 40.0%
!! ACTGTTGGTGTTGGTGTTAT+GGG + chr1.4:76086286-76086305 MS.gene61137:CDS 40.0%
!! CTGAAAGAATTGGTTTGAGC+TGG + chr1.4:76085978-76085997 MS.gene61137:CDS 40.0%
!! CTGCAAATTCTGTTTCTGCT+TGG + chr1.4:76086861-76086880 MS.gene61137:intron 40.0%
!! GTTGGTGTTATGGGCTATAT+TGG + chr1.4:76086295-76086314 MS.gene61137:CDS 40.0%
!! GTTTTTGATGGATGGTCAGA+AGG + chr1.4:76087513-76087532 MS.gene61137:CDS 40.0%
!! TCTCGTACTTATAGGTTGGT+GGG - chr1.4:76087551-76087570 None:intergenic 40.0%
!! TGGACTTCCCAAAAGTATCT+TGG + chr1.4:76086631-76086650 MS.gene61137:CDS 40.0%
AATTTCTCCCAGGCTTAAGG+AGG + chr1.4:76084788-76084807 MS.gene61137:CDS 45.0%
ATACTCGTCCTGTACCGAAA+TGG + chr1.4:76085468-76085487 MS.gene61137:CDS 45.0%
ATAGTGAGCAAGCAGATGGT+TGG + chr1.4:76086199-76086218 MS.gene61137:CDS 45.0%
ATGAATTGTGCTCCAGAGGA+AGG - chr1.4:76087130-76087149 None:intergenic 45.0%
CAACAATGGTCATGCGCAAA+TGG + chr1.4:76084040-76084059 MS.gene61137:CDS 45.0%
CAGAATTTCTCCCAGGCTTA+AGG + chr1.4:76084785-76084804 MS.gene61137:intron 45.0%
CCAAGGACATAGATATCAGC+TGG - chr1.4:76085041-76085060 None:intergenic 45.0%
CCAGCTGATATCTATGTCCT+TGG + chr1.4:76085038-76085057 MS.gene61137:CDS 45.0%
GAAGATAGTGAGCAAGCAGA+TGG + chr1.4:76086195-76086214 MS.gene61137:CDS 45.0%
GGACATAGATATCAGCTGGA+TGG - chr1.4:76085037-76085056 None:intergenic 45.0%
GGTCTCTCCAATACTTTCTG+AGG - chr1.4:76086028-76086047 None:intergenic 45.0%
GGTGAGGAGATTCATCCTTT+AGG + chr1.4:76085644-76085663 MS.gene61137:CDS 45.0%
TACTCGTCCTGTACCGAAAT+GGG + chr1.4:76085469-76085488 MS.gene61137:CDS 45.0%
TAGGCTAAATCATTTCCGCG+AGG + chr1.4:76085805-76085824 MS.gene61137:CDS 45.0%
TAGTCACCATCTGATTCAGC+CGG - chr1.4:76084476-76084495 None:intergenic 45.0%
TCACATGAATTGTGCTCCAG+AGG - chr1.4:76087134-76087153 None:intergenic 45.0%
TGAACTGCAGAATTTCTCCC+AGG + chr1.4:76084778-76084797 MS.gene61137:intron 45.0%
TGGAGATGGAGGATCACTAA+AGG - chr1.4:76085552-76085571 None:intergenic 45.0%
TGTGTTGGGACATGGAATGT+TGG + chr1.4:76084960-76084979 MS.gene61137:CDS 45.0%
TTGGGTGTATTGTGCAGAGT+GGG + chr1.4:76084409-76084428 MS.gene61137:intron 45.0%
TTTCCGATGAATCTTCCTCG+CGG - chr1.4:76085823-76085842 None:intergenic 45.0%
TTTCCGCGAGGAAGATTCAT+CGG + chr1.4:76085817-76085836 MS.gene61137:CDS 45.0%
TTTGGGTGTATTGTGCAGAG+TGG + chr1.4:76084408-76084427 MS.gene61137:intron 45.0%
! ACTTTTGCCTCCTTAAGCCT+GGG - chr1.4:76084798-76084817 None:intergenic 45.0%
!! TCCAGAGGAAGGTGTTAATG+CGG - chr1.4:76087119-76087138 None:intergenic 45.0%
!!! TATTTTATTTATATTTTTCA+GGG + chr1.4:76086455-76086474 MS.gene61137:intron 5.0%
!!! TTATTTTATTTATATTTTTC+AGG + chr1.4:76086454-76086473 MS.gene61137:intron 5.0%
ACCGCATTAACACCTTCCTC+TGG + chr1.4:76087115-76087134 MS.gene61137:intron 50.0%
GTACATTGGAGAGGACCCAA+AGG + chr1.4:76087584-76087603 MS.gene61137:CDS 50.0%
GTTGGGACATGGAATGTTGG+AGG + chr1.4:76084963-76084982 MS.gene61137:CDS 50.0%
TCATCACGGTATGGGTTCGA+AGG + chr1.4:76086227-76086246 MS.gene61137:CDS 50.0%
TGGGTGTATTGTGCAGAGTG+GGG + chr1.4:76084410-76084429 MS.gene61137:intron 50.0%
! CTTCCTTTTCACCTGCCGTA+AGG - chr1.4:76086538-76086557 None:intergenic 50.0%
! CTTTTCACCTGCCGTAAGGT+GGG - chr1.4:76086534-76086553 None:intergenic 50.0%
! GACTTTTGCCTCCTTAAGCC+TGG - chr1.4:76084799-76084818 None:intergenic 50.0%
ATATGCACCCACCTTACGGC+AGG + chr1.4:76086524-76086543 MS.gene61137:CDS 55.0%
ATTGTGCAGAGTGGGGAAGC+CGG + chr1.4:76084417-76084436 MS.gene61137:intron 55.0%
CAGGAGAGAGGATGAAGCTC+CGG + chr1.4:76084454-76084473 MS.gene61137:CDS 55.0%
CCACCTTACGGCAGGTGAAA+AGG + chr1.4:76086532-76086551 MS.gene61137:CDS 55.0%
GAAGCTCCGGCTGAATCAGA+TGG + chr1.4:76084467-76084486 MS.gene61137:CDS 55.0%
GTGTACGCCTCGCAACCTTT+GGG - chr1.4:76087602-76087621 None:intergenic 55.0%
TATGGGTTCGAAGGAGCCTG+CGG + chr1.4:76086236-76086255 MS.gene61137:CDS 55.0%
TCCTGTCCCTAATCCGTGAC+CGG - chr1.4:76084439-76084458 None:intergenic 55.0%
! CCTTTTCACCTGCCGTAAGG+TGG - chr1.4:76086535-76086554 None:intergenic 55.0%
!! ACGGATTAGGGACAGGAGAG+AGG + chr1.4:76084442-76084461 MS.gene61137:CDS 55.0%
GAGAGGACCCAAAGGTTGCG+AGG + chr1.4:76087592-76087611 MS.gene61137:CDS 60.0%
GGTGTACGCCTCGCAACCTT+TGG - chr1.4:76087603-76087622 None:intergenic 60.0%
! GGGAAGCCGGTCACGGATTA+GGG + chr1.4:76084430-76084449 MS.gene61137:CDS 60.0%
CAGAGTGGGGAAGCCGGTCA+CGG + chr1.4:76084423-76084442 MS.gene61137:intron 65.0%
GGGGAAGCCGGTCACGGATT+AGG + chr1.4:76084429-76084448 MS.gene61137:CDS 65.0%
!! GCCGGTCACGGATTAGGGAC+AGG + chr1.4:76084435-76084454 MS.gene61137:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 76084030 76087628 76084030 ID=MS.gene61137
chr1.4 mRNA 76084030 76087628 76084030 ID=MS.gene61137.t1;Parent=MS.gene61137
chr1.4 exon 76084030 76084162 76084030 ID=MS.gene61137.t1.exon1;Parent=MS.gene61137.t1
chr1.4 CDS 76084030 76084162 76084030 ID=cds.MS.gene61137.t1;Parent=MS.gene61137.t1
chr1.4 exon 76084426 76084488 76084426 ID=MS.gene61137.t1.exon2;Parent=MS.gene61137.t1
chr1.4 CDS 76084426 76084488 76084426 ID=cds.MS.gene61137.t1;Parent=MS.gene61137.t1
chr1.4 exon 76084788 76084860 76084788 ID=MS.gene61137.t1.exon3;Parent=MS.gene61137.t1
chr1.4 CDS 76084788 76084860 76084788 ID=cds.MS.gene61137.t1;Parent=MS.gene61137.t1
chr1.4 exon 76084956 76085060 76084956 ID=MS.gene61137.t1.exon4;Parent=MS.gene61137.t1
chr1.4 CDS 76084956 76085060 76084956 ID=cds.MS.gene61137.t1;Parent=MS.gene61137.t1
chr1.4 exon 76085418 76086324 76085418 ID=MS.gene61137.t1.exon5;Parent=MS.gene61137.t1
chr1.4 CDS 76085418 76086324 76085418 ID=cds.MS.gene61137.t1;Parent=MS.gene61137.t1
chr1.4 exon 76086476 76086660 76086476 ID=MS.gene61137.t1.exon6;Parent=MS.gene61137.t1
chr1.4 CDS 76086476 76086660 76086476 ID=cds.MS.gene61137.t1;Parent=MS.gene61137.t1
chr1.4 exon 76086959 76087067 76086959 ID=MS.gene61137.t1.exon7;Parent=MS.gene61137.t1
chr1.4 CDS 76086959 76087067 76086959 ID=cds.MS.gene61137.t1;Parent=MS.gene61137.t1
chr1.4 exon 76087489 76087628 76087489 ID=MS.gene61137.t1.exon8;Parent=MS.gene61137.t1
chr1.4 CDS 76087489 76087628 76087489 ID=cds.MS.gene61137.t1;Parent=MS.gene61137.t1
Gene Sequence

>MS.gene61137

AATTTATGGGCAACAATGGTCATGCGCAAATGGCTTAACATTAAAAGGAAGGAGTCTGATGATTACAGCACCGACCCTGATGATGATGATGATGATGATGAGGATGATCCTGAAACTGATTCAGACAATGAAGGTTAGTCTATTTAGTGATGTTTCTATTGTAATTAATAAAACATTGGTGTGAAATTTTGTCACCGTGTCATTAGCAGACGACTATTCATTTGAAGATTTGGAAATTGAGGATTATGGTTTGTTTCTAACTAATGATCTGAAAATTCAGATTTGTGATTGATTTGAGATCTTAGAAACCATGTCTTGTGTGTGATGAATGATGATTCTGGTTCAGTTTGGTTTTTTCTGTGATCTGTCTCAATTTTATTTGGGTGTATTGTGCAGAGTGGGGAAGCCGGTCACGGATTAGGGACAGGAGAGAGGATGAAGCTCCGGCTGAATCAGATGGTGACTATTTTCTTTCATATATGAAATGATAACAGACAAGTTTTACTGATTTTGTCTTAATTTCAAGACTAGTATAATGCCGTTGGATGGTGATACATCATTATAGTTTTGAAACTAGCACTCGTTAGTTTTGACAATTTTTCCTGTATTAGGCCATTCAAAATTTGTGGATTCCCTAAATTTAAATCGAAAAATGGAACCTCATATTCGACTTTTGAGAGCTAAAATACATATCAAAATCAAATAAGTATTTGCAGCAATAAAAGCATGAACTCTGAATAATTTCAAATGAACTGCAGAATTTCTCCCAGGCTTAAGGAGGCAAAAGTCATTGACTGTAAGGTCTCAATATATAAACAAGAAGGAACTGAGGTTAGGAACTGCTCTTGTCTTAGAAAGCATAGTTTGTTTTTGTTATTTCTCACAAGCCTCTCATATCTGAATTCTGCTGTATACTTTTCTATTAGAGTATGTGTTGGGACATGGAATGTTGGAGGAAAACTTCCACCTAATGACTTTGATATTGATGATTGGCTAGACATTAACCATCCAGCTGATATCTATGTCCTTGGGTAAGTTTCACACTAAATTTTCTCACTATTGCATATACACTCAAATATAAGGCCATTTTGAAATCACTTTTAATACATTTTCTTGCATAATCACTTTTTTTTTTTTTTTTATGGATTTGATTCACATGCACGTTCAGTGTAAAGATTCTTTACACTGTCGATCAATTGTCATTGTCTGAACATGAAAAATGTTTGACTTTAATCATAATTTGCTTCTAAAGTCACACGTATGATTGTTTCTGATTTGATAGTATAAAATTTTCTGCACTGACTGTGTATCAAAAGTGTTTTTATATACACTTGGTGGTTTGTCTGATTTGTTTGACTAAAAAGTTTCTTTGCACTTTGCAATTGCAGTCTTCAAGAGATTGTACCTTTAAACACGAGTAACATTTTTGTTGCTGTAGATACTCGTCCTGTACCGAAATGGGAAAACTTAATTCGAGAAGCTCTGAATAGAGTTCGATCAAAACCTTCAAAGATAAAATCCTTTAGTGATCCTCCATCTCCATCAAAGTTTAAACCATCAGATGATGCACCAGATATAGAAGAAGAAATTCTATTAGAAAGCGATAGTGATATTGGTGAGGAGATTCATCCTTTAGGTGAAGAACATAATTTATTTGGAGTCACAGATAAACCAATCATAGATGAAGCACTGAATATTAGTTTGAAGGATTCAAATGCTTCTGATATAGCTGAGAACGATCTACAGAATCAGTTATCTTATCAAAGAAGGTTGAATAGGCTAAATCATTTCCGCGAGGAAGATTCATCGGAAAACAATGAAACAACTTCTTCTCAACAGATTAGTAAGCTATCTAGAATGATTAATGGGACTGAAAAAGATTCATCGGAAAACAATGAAACGACTTCTTCTCAACAGATTAGTAAGCTATCTAGAATGGTTAGTGGGACTGAAAGAATTGGTTTGAGCTGGCCAGAGCCACCATTACATTTGTTGCCTCAGAAAGTATTGGAGAGACCAACTTATTTTAAACCGGTTAAATCGTTTAATAAGACAAAGTCATTTAGAGCCTGTGATTCTTTCAAATCAAAAACAGATGCTATAGATTTACTGGCTGATATTGATCTTGAAGCTTTGATGAAGAGGAAAACAAGATCGTCGTATGTGAAGATAGTGAGCAAGCAGATGGTTGGTATTTTCATCACGGTATGGGTTCGAAGGAGCCTGCGGAAACATATTCAGAACATGAAGGTTTCAACTGTTGGTGTTGGTGTTATGGGCTATATTGGTAACAAGGTCTCTTTCACTTCCTTTGAAATTTTCCCTAGAGTTTGTAGTTTTTGGTCATTACATTGTCATTAACATATTCATATGAGAAATTGAGAATGATAACATATATGAGAAATGTTATCAATGATGAGAAACTTATTTTATTTATATTTTTCAGGGATCAATATCTGTCAGCATGTCTATTTATCAGACGCTTTTTTGCTTTATATGCACCCACCTTACGGCAGGTGAAAAGGAAGCCGATGAAATCAAACGAAATGCTGATGTTCGTGAAATACATCAGAGGACCCATTTTTATTCACTTTCTGATTTTGGACTTCCCAAAAGTATCTTGGATCATGAGTGAGTTCATGTTTTACATACCACATTCAAATATGTTAATTTAATTTTACTCCTTGAATTATATGCTAATGCCTTTTGATTAAAATTAAGGTAATATATAAAAACAATGTCTTGAATTTACATGGCTAGAATTTAACTTGAACATTTTTTTTTATCCTTCTATATGATTAAATTAGAACCTTCTATTGAAGTAAATTAATCTGCAAATTCTGTTTCTGCTTGGCTGCTGAAATTCTGTATTCACTGGCTCTGTTTGAAAAAATTATAATCATTTAATCAAATTCTAATTTATTTGCAGAAGAATAATTTGGTTCGGTGATCTGAATTACCGTATCAGCTTGCCATATGATAAAACAAGAGATCTTATCTCAAAAAAGCATTGGTCAAAATTGGTTGAGAGAGACCAGGTAATATACCCTTCCATTAGATGTATCAACTTGATACTATCAAGTGTACCGCATTAACACCTTCCTCTGGAGCACAATTCATGTGATTATTGATGTCTTATTTCTGAGGAGTAATAAGCAAAATCCATTAAGAAATATATGTTCCGTCACTCAGTAAATTCATCGACATCATTTCATCGTAAACTTGCAATTCATTAATTGAAATACTACAAGTTAAGAGCATCACTTGAATAACAACTTATGTAGAAACTACTCGAGTAAATAAAACTTTATGTTGATATTTATATCCATTTTGTAACATAGATAATCGTGTTTAAGGGTTTAGGGTTTCATGATATTTATATCCTTATTCATTTTGATTTCATGATATAGATTTTGAACTCAAGTTAAAAGGGTATATATTGACATCTTACTATGACAGCTTGTGAAAGAATTAGAGAAAGGTGTTTTTGATGGATGGTCAGAAGGTGCGTTAAACTTCCCACCAACCTATAAGTACGAGATTAATTCAGACAAGTACATTGGAGAGGACCCAAAGGTTGCGAGGCGTACACCAGCATG
Protein sequence

>MS.gene61137.t1

NLWATMVMRKWLNIKRKESDDYSTDPDDDDDDDEDDPETDSDNEEWGSRSRIRDRREDEAPAESDEFLPGLRRQKSLTVRSQYINKKELRVCVGTWNVGGKLPPNDFDIDDWLDINHPADIYVLGLQEIVPLNTSNIFVAVDTRPVPKWENLIREALNRVRSKPSKIKSFSDPPSPSKFKPSDDAPDIEEEILLESDSDIGEEIHPLGEEHNLFGVTDKPIIDEALNISLKDSNASDIAENDLQNQLSYQRRLNRLNHFREEDSSENNETTSSQQISKLSRMINGTEKDSSENNETTSSQQISKLSRMVSGTERIGLSWPEPPLHLLPQKVLERPTYFKPVKSFNKTKSFRACDSFKSKTDAIDLLADIDLEALMKRKTRSSYVKIVSKQMVGIFITVWVRRSLRKHIQNMKVSTVGVGVMGYIGNKGSISVSMSIYQTLFCFICTHLTAGEKEADEIKRNADVREIHQRTHFYSLSDFGLPKSILDHERIIWFGDLNYRISLPYDKTRDLISKKHWSKLVERDQLVKELEKGVFDGWSEGALNFPPTYKYEINSDKYIGEDPKVARRTPA