Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61623.t1 | XP_013455691.1 | 97.3 | 586 | 16 | 0 | 1 | 586 | 1 | 586 | 3.20E-260 | 907.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61623.t1 | B7ZWR6 | 47.1 | 599 | 259 | 6 | 1 | 586 | 1 | 554 | 1.9e-96 | 354.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61623.t1 | A0A072UJ56 | 97.3 | 586 | 16 | 0 | 1 | 586 | 1 | 586 | 2.3e-260 | 907.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05127 | MS.gene61623 | 0.817076 | 3.98E-52 | -1.69E-46 |
| MS.gene052309 | MS.gene61623 | 0.823229 | 1.55E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61623.t1 | MTR_4g050120 | 97.952 | 586 | 12 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1173 |
| MS.gene61623.t1 | MTR_4g039430 | 33.125 | 160 | 99 | 2 | 70 | 221 | 151 | 310 | 3.09e-13 | 72.0 |
| MS.gene61623.t1 | MTR_7g059150 | 30.263 | 152 | 100 | 3 | 60 | 209 | 52 | 199 | 2.61e-11 | 64.7 |
| MS.gene61623.t1 | MTR_2g090135 | 32.174 | 115 | 76 | 1 | 107 | 221 | 102 | 214 | 4.50e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61623.t1 | AT5G21990 | 59.391 | 591 | 198 | 8 | 1 | 586 | 1 | 554 | 0.0 | 656 |
| MS.gene61623.t1 | AT3G21640 | 30.909 | 165 | 106 | 2 | 70 | 226 | 146 | 310 | 3.19e-12 | 68.9 |
| MS.gene61623.t1 | AT5G48570 | 33.333 | 123 | 76 | 1 | 93 | 209 | 400 | 522 | 1.14e-11 | 68.2 |
| MS.gene61623.t1 | AT1G58450 | 34.694 | 147 | 87 | 3 | 99 | 239 | 6 | 149 | 2.37e-11 | 62.8 |
| MS.gene61623.t1 | AT4G30480 | 35.652 | 115 | 72 | 1 | 100 | 214 | 102 | 214 | 3.33e-11 | 64.7 |
Find 122 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATATGCATGCTCATTT+TGG | 0.121178 | 4.1:-47690200 | MS.gene61623:CDS |
| CCCATGTTTGCCATCACTTC+CGG | 0.224064 | 4.1:+47690933 | None:intergenic |
| GAAATGGCATCCTTACTAAA+AGG | 0.227081 | 4.1:-47691919 | MS.gene61623:CDS |
| CGACATTTGAAATGAAGTTT+TGG | 0.259058 | 4.1:+47692226 | None:intergenic |
| TCAAGCACCACTCGTGCTTT+TGG | 0.261508 | 4.1:-47691823 | MS.gene61623:CDS |
| ACCAGAGAACTTGGATAAAA+TGG | 0.264066 | 4.1:-47690841 | MS.gene61623:intron |
| CCATGTTTGCCATCACTTCC+GGG | 0.272628 | 4.1:+47690934 | None:intergenic |
| TCCAACTACCTGATGGCTTC+TGG | 0.279215 | 4.1:+47692349 | None:intergenic |
| GAGGATGCTTTAATCATATC+TGG | 0.279365 | 4.1:+47692153 | None:intergenic |
| CATTGTCTTCACAGATGCTT+TGG | 0.285762 | 4.1:-47690300 | MS.gene61623:intron |
| ACTCTGGCTTCTTTAAATAA+TGG | 0.300399 | 4.1:-47692195 | MS.gene61623:CDS |
| GCATAGCTGGATCTTTCATC+TGG | 0.303769 | 4.1:+47691701 | None:intergenic |
| AAACTCTCTGAAGTTGATTT+CGG | 0.313390 | 4.1:+47692391 | None:intergenic |
| CATATCTGGAGACACATCTT+TGG | 0.321873 | 4.1:+47692167 | None:intergenic |
| TCAAAGTAGAAAGCTTCTTT+TGG | 0.327072 | 4.1:-47693790 | MS.gene61623:CDS |
| CGCATAGCTGCTACTTCTTC+GGG | 0.331553 | 4.1:+47694647 | None:intergenic |
| ATACTTGAGGATGGGAAGTT+TGG | 0.333082 | 4.1:+47691748 | None:intergenic |
| GAAGACGAGAATGTGCCTTC+TGG | 0.338769 | 4.1:-47692508 | MS.gene61623:CDS |
| AATGCAGTTGAAGTGTCTTT+TGG | 0.344640 | 4.1:-47693214 | MS.gene61623:CDS |
| TCGAAGAGGTCAAGCGTATA+AGG | 0.350697 | 4.1:-47693369 | MS.gene61623:CDS |
| GCAAACATGGGAGAGCAATT+TGG | 0.351085 | 4.1:-47690921 | MS.gene61623:CDS |
| CCAATCTCAGCCATCTCTTC+AGG | 0.355137 | 4.1:+47694692 | None:intergenic |
| AGCTTTCTACTTTGAAAAGA+TGG | 0.370939 | 4.1:+47693798 | None:intergenic |
| ATCCAAGTTCTCTGGTGATA+AGG | 0.372718 | 4.1:+47690848 | None:intergenic |
| TGAGCGATTCGGATCAAATC+AGG | 0.378317 | 4.1:+47695567 | None:intergenic |
| TCATAATTCAAAATGTTTAA+CGG | 0.383982 | 4.1:-47695600 | None:intergenic |
| AACATCTTCTTAAGCTCATC+TGG | 0.386421 | 4.1:+47691943 | None:intergenic |
| ACGCATAGCTGCTACTTCTT+CGG | 0.389147 | 4.1:+47694646 | None:intergenic |
| GATTTCGGATTCCCATTGTT+AGG | 0.390105 | 4.1:+47692406 | None:intergenic |
| TTCCTTTATCAACTGTTCCT+TGG | 0.396891 | 4.1:+47692697 | None:intergenic |
| CTGCCTTGTCTTCAAGTAAC+AGG | 0.403213 | 4.1:+47693746 | None:intergenic |
| TCGTATGTCACCTGATGATA+TGG | 0.407299 | 4.1:-47695532 | MS.gene61623:CDS |
| TTTGCAGATGTTCACATCAA+TGG | 0.412865 | 4.1:-47690970 | MS.gene61623:intron |
| GACATGGCATCTTCATTTCA+AGG | 0.413677 | 4.1:-47692084 | MS.gene61623:CDS |
| ATCCTTATCACCAGAGAACT+TGG | 0.418317 | 4.1:-47690850 | MS.gene61623:CDS |
| CAAAATGTTTAACGGTATGA+TGG | 0.422343 | 4.1:-47695592 | None:intergenic |
| AACATATCGGGTGTCACGTT+GGG | 0.422526 | 4.1:+47692000 | None:intergenic |
| AACTGGTTGCTAGGAAGATC+AGG | 0.423326 | 4.1:-47690232 | MS.gene61623:CDS |
| TACCAAGGAACAGTTGATAA+AGG | 0.423449 | 4.1:-47692699 | MS.gene61623:CDS |
| AGAAGCAGCAAAAGCTCAGC+AGG | 0.432548 | 4.1:-47690880 | MS.gene61623:CDS |
| GCTTTCATTCTTCACCGGTC+AGG | 0.432561 | 4.1:-47690178 | MS.gene61623:CDS |
| GAACATACCTGCCGCATAGC+TGG | 0.437480 | 4.1:+47691688 | None:intergenic |
| ATTGTCTTCACAGATGCTTT+GGG | 0.443361 | 4.1:-47690299 | MS.gene61623:intron |
| CCCGGAAGTGATGGCAAACA+TGG | 0.447973 | 4.1:-47690934 | MS.gene61623:CDS |
| TTGTCCACAGCTGCTGATGA+TGG | 0.450527 | 4.1:+47691883 | None:intergenic |
| CTTCACCGGTCAGGTTTCAT+TGG | 0.454639 | 4.1:-47690169 | MS.gene61623:CDS |
| TCATCTGTTCTTGAGCGATT+CGG | 0.455029 | 4.1:+47695556 | None:intergenic |
| AAAGCATCCTCTGAAATGAT+TGG | 0.458610 | 4.1:-47692141 | MS.gene61623:CDS |
| AAATGGCATCCTTACTAAAA+GGG | 0.458669 | 4.1:-47691918 | MS.gene61623:CDS |
| GCTTAAGAAGATGTTTGAAA+TGG | 0.466002 | 4.1:-47691935 | MS.gene61623:CDS |
| TTTAAAGAAGCCAGAGTGGC+AGG | 0.468824 | 4.1:+47692201 | None:intergenic |
| ACGTTGGGAGGAATAGATCC+TGG | 0.479389 | 4.1:+47692015 | None:intergenic |
| CCTGAAGAGATGGCTGAGAT+TGG | 0.480745 | 4.1:-47694692 | MS.gene61623:CDS |
| TGTAAATCAATACTTGAGGA+TGG | 0.486305 | 4.1:+47691739 | None:intergenic |
| TATGGCTCGGATCCAGCAAC+AGG | 0.486975 | 4.1:-47695514 | MS.gene61623:intron |
| AATGCATTGTTAGAAGAACT+TGG | 0.494021 | 4.1:+47691796 | None:intergenic |
| GCACGAGTGGTGCTTGAGGA+TGG | 0.495589 | 4.1:+47691829 | None:intergenic |
| TGGGTTGAAAGGAGAATTAG+AGG | 0.501276 | 4.1:+47692035 | None:intergenic |
| TGCATTGCTCAAATCAGAAA+CGG | 0.502265 | 4.1:+47693231 | None:intergenic |
| GCGTGCTCATGCTGATGCTC+AGG | 0.505860 | 4.1:-47694627 | MS.gene61623:CDS |
| CACAGATGCTTTGGGCGGAT+AGG | 0.508756 | 4.1:-47690291 | MS.gene61623:intron |
| AAATGTCGATCCTGCCACTC+TGG | 0.509523 | 4.1:-47692211 | MS.gene61623:CDS |
| GTAAAAGTATACCTAACAAT+GGG | 0.510704 | 4.1:-47692417 | MS.gene61623:CDS |
| GGAATAGATCCTGGGTTGAA+AGG | 0.511847 | 4.1:+47692024 | None:intergenic |
| ACTTGAAGCTTACATGTAGC+TGG | 0.517400 | 4.1:+47693339 | None:intergenic |
| AAATATGAGCCCGGAAGTGA+TGG | 0.518694 | 4.1:-47690943 | MS.gene61623:CDS |
| GTGTTAAAAGAACAAAGAAC+TGG | 0.522183 | 4.1:-47690249 | MS.gene61623:CDS |
| CAGCTTCTGTTGTTTCCAGA+AGG | 0.526783 | 4.1:+47692493 | None:intergenic |
| GAAGCCATCCTCATCAACTC+TGG | 0.527021 | 4.1:+47694782 | None:intergenic |
| AGAACAAAGAACTGGTTGCT+AGG | 0.527330 | 4.1:-47690241 | MS.gene61623:CDS |
| GGCTGAGATTGGTCAGAAGA+TGG | 0.530746 | 4.1:-47694681 | MS.gene61623:CDS |
| TGGATCCGAGCCATATCATC+AGG | 0.531740 | 4.1:+47695522 | None:intergenic |
| TATGAAGAATGCATAAAAGA+AGG | 0.539549 | 4.1:-47693723 | MS.gene61623:CDS |
| TCTAATTCTCCTTTCAACCC+AGG | 0.545074 | 4.1:-47692033 | MS.gene61623:CDS |
| CACGAGTGGTGCTTGAGGAT+GGG | 0.545236 | 4.1:+47691830 | None:intergenic |
| AGGTCAAATATCAATTGAGT+GGG | 0.550505 | 4.1:-47694607 | MS.gene61623:CDS |
| ACATGGCATCTTCATTTCAA+GGG | 0.551051 | 4.1:-47692083 | MS.gene61623:CDS |
| GCATACACGGCCTGAAGAGA+TGG | 0.552117 | 4.1:-47694702 | MS.gene61623:CDS |
| CATAGCTGGATCTTTCATCT+GGG | 0.557092 | 4.1:+47691702 | None:intergenic |
| TGCTTTGCAGAAGTATAAGC+TGG | 0.557423 | 4.1:-47693970 | MS.gene61623:intron |
| CATCTTGCCAATCATTTCAG+AGG | 0.558168 | 4.1:+47692134 | None:intergenic |
| GTAAATCAATACTTGAGGAT+GGG | 0.560855 | 4.1:+47691740 | None:intergenic |
| GGTCAAGCGTATAAGGAACT+AGG | 0.561497 | 4.1:-47693362 | MS.gene61623:CDS |
| AGTAAAAGTATACCTAACAA+TGG | 0.565472 | 4.1:-47692418 | MS.gene61623:CDS |
| GGAAATGTTCTTCACAGTCA+AGG | 0.565669 | 4.1:-47694005 | MS.gene61623:CDS |
| ATTTGGTTTCAAGCTTTCAC+CGG | 0.570135 | 4.1:-47690904 | MS.gene61623:CDS |
| GAAATGTTCTTCACAGTCAA+GGG | 0.570257 | 4.1:-47694004 | MS.gene61623:CDS |
| CATGGCATCTTCATTTCAAG+GGG | 0.572448 | 4.1:-47692082 | MS.gene61623:CDS |
| TATTCCATCATCAGCAGCTG+TGG | 0.573404 | 4.1:-47691887 | MS.gene61623:CDS |
| GAAAGATCCAGCTATGCGGC+AGG | 0.573511 | 4.1:-47691695 | MS.gene61623:intron |
| TTCTTGTAAATCAATACTTG+AGG | 0.577474 | 4.1:+47691735 | None:intergenic |
| GGCTGAGATGTTGAAGAACC+AGG | 0.580395 | 4.1:-47694585 | MS.gene61623:intron |
| AAGGAACAGTTGATAAAGGA+AGG | 0.585297 | 4.1:-47692695 | MS.gene61623:CDS |
| AAACATATCGGGTGTCACGT+TGG | 0.587031 | 4.1:+47691999 | None:intergenic |
| CTCAAGGCTCTTTATCGAAG+AGG | 0.590592 | 4.1:-47693383 | MS.gene61623:CDS |
| AGCTACCAATGAAACCTGAC+CGG | 0.591426 | 4.1:+47690164 | None:intergenic |
| AAAAGCACGAGTGGTGCTTG+AGG | 0.596811 | 4.1:+47691825 | None:intergenic |
| CAGGTCAAATATCAATTGAG+TGG | 0.598786 | 4.1:-47694608 | MS.gene61623:CDS |
| CTGAACAGTTAAAGCATACA+CGG | 0.600360 | 4.1:-47694715 | MS.gene61623:CDS |
| CGTTGGGAGGAATAGATCCT+GGG | 0.606020 | 4.1:+47692016 | None:intergenic |
| ATATCGGGTGTCACGTTGGG+AGG | 0.610636 | 4.1:+47692003 | None:intergenic |
| TGTCACCTGATGATATGGCT+CGG | 0.612793 | 4.1:-47695527 | MS.gene61623:CDS |
| TGTTTGTTTCAGGGATACCA+AGG | 0.613207 | 4.1:-47692714 | MS.gene61623:intron |
| TAATCCAGAGTTGATGAGGA+TGG | 0.614927 | 4.1:-47694786 | MS.gene61623:CDS |
| ATGCATAAAAGAAGGTTCTG+AGG | 0.626114 | 4.1:-47693715 | MS.gene61623:intron |
| GTCTTCACAGATGCTTTGGG+CGG | 0.627081 | 4.1:-47690296 | MS.gene61623:intron |
| TGTCCTGTTACTTGAAGACA+AGG | 0.630117 | 4.1:-47693749 | MS.gene61623:CDS |
| ATATGATGCAAAGAACCTCA+AGG | 0.636392 | 4.1:-47693399 | MS.gene61623:CDS |
| TGGTTCTCCAAAAGCACGAG+TGG | 0.643149 | 4.1:+47691816 | None:intergenic |
| CCGGAAGTGATGGCAAACAT+GGG | 0.645744 | 4.1:-47690933 | MS.gene61623:CDS |
| ATTATTTAAAGAAGCCAGAG+TGG | 0.646867 | 4.1:+47692197 | None:intergenic |
| GCATGCATATTGCAAAGACA+AGG | 0.656347 | 4.1:+47690209 | None:intergenic |
| TGGGCGGATAGGCTTCAAAG+AGG | 0.659151 | 4.1:-47690280 | MS.gene61623:CDS |
| ACTTCAGAAAATGCTTGACA+TGG | 0.665007 | 4.1:-47692100 | MS.gene61623:CDS |
| ATCTTCTTAAGCTCATCTGG+TGG | 0.671873 | 4.1:+47691946 | None:intergenic |
| TGTATGCTTTAACTGTTCAG+CGG | 0.674057 | 4.1:+47694718 | None:intergenic |
| CTCTTCGATAAAGAGCCTTG+AGG | 0.680295 | 4.1:+47693384 | None:intergenic |
| TGTCTAATCCAGAGTTGATG+AGG | 0.680638 | 4.1:-47694790 | MS.gene61623:CDS |
| GAACAGTTGATAAAGGAAGG+TGG | 0.706338 | 4.1:-47692692 | MS.gene61623:CDS |
| GATTGGCAAGATGTCACCTG+AGG | 0.722339 | 4.1:-47692124 | MS.gene61623:CDS |
| GGTCAAATATCAATTGAGTG+GGG | 0.726609 | 4.1:-47694606 | MS.gene61623:CDS |
| AGATGAAAGATCCAGCTATG+CGG | 0.731530 | 4.1:-47691699 | MS.gene61623:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACTTAGAAATTAAAATA+AGG | + | chr4.1:47694754-47694773 | None:intergenic | 10.0% |
| !! | TAATTGTATTATGTAAAAAT+AGG | - | chr4.1:47692193-47692212 | MS.gene61623:CDS | 10.0% |
| !!! | AATTTTAAATATTTTATCAC+TGG | + | chr4.1:47694207-47694226 | None:intergenic | 10.0% |
| !!! | AGTGATAAAATATTTAAAAT+TGG | - | chr4.1:47694206-47694225 | MS.gene61623:intron | 10.0% |
| !!! | ATAATTGTTATTTTCTTTTT+AGG | - | chr4.1:47692919-47692938 | MS.gene61623:intron | 10.0% |
| !!! | GATATAAAATTAAATTTTAC+AGG | - | chr4.1:47691723-47691742 | MS.gene61623:CDS | 10.0% |
| !! | AAAAATTGTAATCAGTTATT+AGG | + | chr4.1:47691656-47691675 | None:intergenic | 15.0% |
| !! | AAAATTGTAATCAGTTATTA+GGG | + | chr4.1:47691655-47691674 | None:intergenic | 15.0% |
| !! | AAACCAAAGTAAATAATTAA+AGG | + | chr4.1:47694596-47694615 | None:intergenic | 15.0% |
| !! | AACCAAAGTAAATAATTAAA+GGG | + | chr4.1:47694595-47694614 | None:intergenic | 15.0% |
| !! | ATAAATTATGTATAGTACTT+CGG | + | chr4.1:47694689-47694708 | None:intergenic | 15.0% |
| !! | ATATACAAATATAATTGGAA+AGG | + | chr4.1:47694324-47694343 | None:intergenic | 15.0% |
| !! | ATTTATATAACTTTAGACTT+TGG | + | chr4.1:47694946-47694965 | None:intergenic | 15.0% |
| !! | TAGCTATTATTTAACAAAAT+TGG | - | chr4.1:47690632-47690651 | MS.gene61623:intron | 15.0% |
| !!! | AATTTCATTTTTGACATATA+TGG | - | chr4.1:47694437-47694456 | MS.gene61623:intron | 15.0% |
| !!! | ATAACTTCTTTTTTAAGAAA+AGG | - | chr4.1:47692942-47692961 | MS.gene61623:intron | 15.0% |
| !!! | ATTGACAATTTTCTAATTAT+GGG | - | chr4.1:47692691-47692710 | MS.gene61623:CDS | 15.0% |
| !!! | ATTTAATTCAAGAGAAATTT+TGG | + | chr4.1:47694292-47694311 | None:intergenic | 15.0% |
| !!! | TAACTTCTTTTTTAAGAAAA+GGG | - | chr4.1:47692943-47692962 | MS.gene61623:intron | 15.0% |
| !!! | TTAATTTAATTTTACATTCC+AGG | - | chr4.1:47691906-47691925 | MS.gene61623:CDS | 15.0% |
| !!! | TTTTGTTTTTTAATTGATTG+TGG | - | chr4.1:47690425-47690444 | MS.gene61623:intron | 15.0% |
| !! | AAAGAAAATAAAAAAGACCA+TGG | + | chr4.1:47691239-47691258 | None:intergenic | 20.0% |
| !! | AATTAACTATGAAATTGAGT+TGG | + | chr4.1:47690340-47690359 | None:intergenic | 20.0% |
| !! | AGTATTAGGATACATAATAA+AGG | - | chr4.1:47695330-47695349 | MS.gene61623:intron | 20.0% |
| !! | ATGTTCTTATTGATATAATG+TGG | - | chr4.1:47690892-47690911 | MS.gene61623:CDS | 20.0% |
| !! | GATAAACAAGAAGAAAAAAA+AGG | + | chr4.1:47691838-47691857 | None:intergenic | 20.0% |
| !! | TAATTAAATATTTGACCCAA+GGG | - | chr4.1:47694541-47694560 | MS.gene61623:intron | 20.0% |
| !! | TACCCTTTAATTATTTACTT+TGG | - | chr4.1:47694590-47694609 | MS.gene61623:CDS | 20.0% |
| !! | TTAATTAAATATTTGACCCA+AGG | - | chr4.1:47694540-47694559 | MS.gene61623:intron | 20.0% |
| !! | TTCAAATGTAATTCCATTTA+TGG | + | chr4.1:47691537-47691556 | None:intergenic | 20.0% |
| !! | TTGTTCACATCAATATTTAA+TGG | - | chr4.1:47692474-47692493 | MS.gene61623:CDS | 20.0% |
| !!! | AACTTCTTTTTTAAGAAAAG+GGG | - | chr4.1:47692944-47692963 | MS.gene61623:intron | 20.0% |
| !!! | AAGTTGGGTTTTAAAAATTA+AGG | + | chr4.1:47691441-47691460 | None:intergenic | 20.0% |
| !!! | AATATTTTATCACTGGTATA+CGG | + | chr4.1:47694200-47694219 | None:intergenic | 20.0% |
| !!! | AATTTAGAGCCATAAATTTA+AGG | + | chr4.1:47693152-47693171 | None:intergenic | 20.0% |
| !!! | ATTTAGAGCCATAAATTTAA+GGG | + | chr4.1:47693151-47693170 | None:intergenic | 20.0% |
| !!! | GATTGACAATTTTCTAATTA+TGG | - | chr4.1:47692690-47692709 | MS.gene61623:CDS | 20.0% |
| !!! | TATCTCTATTTTGAGATTAA+AGG | - | chr4.1:47691854-47691873 | MS.gene61623:CDS | 20.0% |
| !!! | TTATGGCTCTAAATTTTTAA+TGG | - | chr4.1:47693157-47693176 | MS.gene61623:intron | 20.0% |
| !!! | TTTATACACTTTTCTTTTAC+TGG | - | chr4.1:47695111-47695130 | MS.gene61623:intron | 20.0% |
| ! | AAATATCTTTATAGTCTCCT+TGG | + | chr4.1:47692167-47692186 | None:intergenic | 25.0% |
| ! | AACACACATATTAACGTATT+TGG | + | chr4.1:47690774-47690793 | None:intergenic | 25.0% |
| ! | AATCAATGTAAACAATGGAT+TGG | - | chr4.1:47692754-47692773 | MS.gene61623:intron | 25.0% |
| ! | AATTAATTACAGAAGAGGAA+TGG | + | chr4.1:47692892-47692911 | None:intergenic | 25.0% |
| ! | ATATATATTTACTACTGACC+TGG | + | chr4.1:47691186-47691205 | None:intergenic | 25.0% |
| ! | ATTATGTATCCTAATACTAC+AGG | + | chr4.1:47695328-47695347 | None:intergenic | 25.0% |
| ! | CAATCAATCAATGTAAACAA+TGG | - | chr4.1:47692749-47692768 | MS.gene61623:intron | 25.0% |
| ! | CTTCAAATTAGAATCAATCT+TGG | + | chr4.1:47690678-47690697 | None:intergenic | 25.0% |
| ! | GTCAGTAGTAAATATATATC+AGG | - | chr4.1:47691187-47691206 | MS.gene61623:intron | 25.0% |
| ! | TATGAAGAATGCATAAAAGA+AGG | - | chr4.1:47692027-47692046 | MS.gene61623:CDS | 25.0% |
| ! | TCTCTAATTAATTACAGAAG+AGG | + | chr4.1:47692897-47692916 | None:intergenic | 25.0% |
| ! | TTCTTGTAAATCAATACTTG+AGG | + | chr4.1:47694018-47694037 | None:intergenic | 25.0% |
| ! | TTGTAAAACATTCGAATACA+AGG | - | chr4.1:47695066-47695085 | MS.gene61623:intron | 25.0% |
| ! | TTGTAGTAAATAGCATATCT+CGG | - | chr4.1:47690569-47690588 | MS.gene61623:intron | 25.0% |
| !! | AACAAACTTTGTGTTTTCAT+TGG | - | chr4.1:47694404-47694423 | MS.gene61623:intron | 25.0% |
| !! | AGTAAAAGTATACCTAACAA+TGG | - | chr4.1:47693332-47693351 | MS.gene61623:intron | 25.0% |
| !! | ATACAATTGCAGATCTTTTA+CGG | - | chr4.1:47692564-47692583 | MS.gene61623:intron | 25.0% |
| !! | ATATGTCATTTGTAGATGAA+CGG | + | chr4.1:47692642-47692661 | None:intergenic | 25.0% |
| !! | ATATTTTATCACTGGTATAC+GGG | + | chr4.1:47694199-47694218 | None:intergenic | 25.0% |
| !! | GATTAGTTAGAGATATATCA+CGG | - | chr4.1:47695370-47695389 | MS.gene61623:intron | 25.0% |
| !! | GTAAAAGTATACCTAACAAT+GGG | - | chr4.1:47693333-47693352 | MS.gene61623:intron | 25.0% |
| !! | GTAAGCTGTGATATTATTTT+GGG | - | chr4.1:47692129-47692148 | MS.gene61623:CDS | 25.0% |
| !! | TGTAAGCTGTGATATTATTT+TGG | - | chr4.1:47692128-47692147 | MS.gene61623:CDS | 25.0% |
| !! | TTAAACAAAACAGCAACTTT+TGG | + | chr4.1:47694372-47694391 | None:intergenic | 25.0% |
| !! | TTACTGGTTGATATTACTTA+CGG | - | chr4.1:47695127-47695146 | MS.gene61623:intron | 25.0% |
| !! | TTTCATTTTGTCATTGCAAT+GGG | - | chr4.1:47692071-47692090 | MS.gene61623:CDS | 25.0% |
| !!! | ACGTTAATATGTGTGTTTTT+TGG | - | chr4.1:47690777-47690796 | MS.gene61623:intron | 25.0% |
| !!! | ACTTGCAGTTTTAAACATAT+CGG | + | chr4.1:47693766-47693785 | None:intergenic | 25.0% |
| !!! | GACACTTTGAAATTACAAAA+GGG | + | chr4.1:47691342-47691361 | None:intergenic | 25.0% |
| !!! | GATGTGTTTTATTGTTGTTT+TGG | - | chr4.1:47690925-47690944 | MS.gene61623:CDS | 25.0% |
| AAAAATTAGAAACCTGTTGC+TGG | + | chr4.1:47690251-47690270 | None:intergenic | 30.0% | |
| AAATGGCATCCTTACTAAAA+GGG | - | chr4.1:47693832-47693851 | MS.gene61623:intron | 30.0% | |
| AATGCATTGTTAGAAGAACT+TGG | + | chr4.1:47693957-47693976 | None:intergenic | 30.0% | |
| AATGGTTAAAAATATGAGCC+CGG | - | chr4.1:47694798-47694817 | MS.gene61623:intron | 30.0% | |
| ACTTTACTTAACTGTTACCT+TGG | - | chr4.1:47691810-47691829 | MS.gene61623:CDS | 30.0% | |
| AGGTCAAATATCAATTGAGT+GGG | - | chr4.1:47691143-47691162 | MS.gene61623:intron | 30.0% | |
| ATCTGACTATCTGCATATAT+TGG | - | chr4.1:47691414-47691433 | MS.gene61623:intron | 30.0% | |
| ATGAAAGTAAATCTCAGACA+TGG | + | chr4.1:47694633-47694652 | None:intergenic | 30.0% | |
| ATGCTTCCATCATGAAAAAT+CGG | + | chr4.1:47691391-47691410 | None:intergenic | 30.0% | |
| ATTATATTCCGAAAAATGCG+AGG | - | chr4.1:47694342-47694361 | MS.gene61623:intron | 30.0% | |
| ATTATTTAAAGAAGCCAGAG+TGG | + | chr4.1:47693556-47693575 | None:intergenic | 30.0% | |
| CAAAATTGGATATCTTGCAT+TGG | - | chr4.1:47690646-47690665 | MS.gene61623:intron | 30.0% | |
| CAAATTAGAATCAATCTTGG+AGG | + | chr4.1:47690675-47690694 | None:intergenic | 30.0% | |
| CATTAATGCTCTTCTAACTA+TGG | - | chr4.1:47692317-47692336 | MS.gene61623:intron | 30.0% | |
| CATTGCAATGACAAAATGAA+AGG | + | chr4.1:47692072-47692091 | None:intergenic | 30.0% | |
| CATTTGGTATATTCCTAGTA+TGG | + | chr4.1:47695029-47695048 | None:intergenic | 30.0% | |
| CCATAGAATGATAGAATGAA+TGG | - | chr4.1:47691568-47691587 | MS.gene61623:intron | 30.0% | |
| CCATTCATTCTATCATTCTA+TGG | + | chr4.1:47691571-47691590 | None:intergenic | 30.0% | |
| CTACATGCACGATTTAAAAA+AGG | + | chr4.1:47693196-47693215 | None:intergenic | 30.0% | |
| CTTACCATCTTGTTAATCTT+AGG | + | chr4.1:47694994-47695013 | None:intergenic | 30.0% | |
| GAGAAGTGAAAGATGAAATT+TGG | + | chr4.1:47694147-47694166 | None:intergenic | 30.0% | |
| GCTTAAGAAGATGTTTGAAA+TGG | - | chr4.1:47693815-47693834 | MS.gene61623:CDS | 30.0% | |
| GTAAATCAATACTTGAGGAT+GGG | + | chr4.1:47694013-47694032 | None:intergenic | 30.0% | |
| GTGTTAAAAGAACAAAGAAC+TGG | - | chr4.1:47695501-47695520 | MS.gene61623:intron | 30.0% | |
| GTTGATCAACCAAAAAAGTT+TGG | - | chr4.1:47693296-47693315 | MS.gene61623:intron | 30.0% | |
| TAATATCACAGCTTACATGT+TGG | + | chr4.1:47692125-47692144 | None:intergenic | 30.0% | |
| TATTGAGTGTCCTCTAATAA+AGG | - | chr4.1:47692831-47692850 | MS.gene61623:intron | 30.0% | |
| TCAATATTTAATGGCATTCC+TGG | - | chr4.1:47692483-47692502 | MS.gene61623:CDS | 30.0% | |
| TGTAAATCAATACTTGAGGA+TGG | + | chr4.1:47694014-47694033 | None:intergenic | 30.0% | |
| TTAACAAGATGGTAAGATGA+AGG | - | chr4.1:47694998-47695017 | MS.gene61623:intron | 30.0% | |
| ! | AACCCTTTTCCTCAATTATT+TGG | - | chr4.1:47691497-47691516 | MS.gene61623:intron | 30.0% |
| ! | ACCCTTTTCCTCAATTATTT+GGG | - | chr4.1:47691498-47691517 | MS.gene61623:intron | 30.0% |
| ! | ACTCTGGCTTCTTTAAATAA+TGG | - | chr4.1:47693555-47693574 | MS.gene61623:intron | 30.0% |
| ! | AGATTCTTTCCCTTTTAGTA+AGG | + | chr4.1:47693844-47693863 | None:intergenic | 30.0% |
| ! | AGCTTTCTACTTTGAAAAGA+TGG | + | chr4.1:47691955-47691974 | None:intergenic | 30.0% |
| ! | CTTTCATTTTGTCATTGCAA+TGG | - | chr4.1:47692070-47692089 | MS.gene61623:CDS | 30.0% |
| ! | GACAATTTTCTAATTATGGG+TGG | - | chr4.1:47692694-47692713 | MS.gene61623:CDS | 30.0% |
| ! | GTTAACCAACTTTTCTTAAG+AGG | - | chr4.1:47694502-47694521 | MS.gene61623:intron | 30.0% |
| ! | TAATTTTACATTCCAGGCTA+AGG | - | chr4.1:47691912-47691931 | MS.gene61623:CDS | 30.0% |
| ! | TACTGGTTGATATTACTTAC+GGG | - | chr4.1:47695128-47695147 | MS.gene61623:intron | 30.0% |
| ! | TCAAAGTAGAAAGCTTCTTT+TGG | - | chr4.1:47691960-47691979 | MS.gene61623:CDS | 30.0% |
| !! | AAACTCTCTGAAGTTGATTT+CGG | + | chr4.1:47693362-47693381 | None:intergenic | 30.0% |
| !! | CGACACTTTGAAATTACAAA+AGG | + | chr4.1:47691343-47691362 | None:intergenic | 30.0% |
| !! | CGACATTTGAAATGAAGTTT+TGG | + | chr4.1:47693527-47693546 | None:intergenic | 30.0% |
| !! | CTCTAATAAAGGAGTTGATA+CGG | - | chr4.1:47692842-47692861 | MS.gene61623:intron | 30.0% |
| !!! | CTTGCAGTTTTAAACATATC+GGG | + | chr4.1:47693765-47693784 | None:intergenic | 30.0% |
| !!! | TTCTTTTTTAAGAAAAGGGG+AGG | - | chr4.1:47692947-47692966 | MS.gene61623:intron | 30.0% |
| AAATTACCAACTACTCCCTT+GGG | + | chr4.1:47694559-47694578 | None:intergenic | 35.0% | |
| AACATCTTCTTAAGCTCATC+TGG | + | chr4.1:47693810-47693829 | None:intergenic | 35.0% | |
| AATGCATTGCTGGAATGAAA+CGG | + | chr4.1:47692301-47692320 | None:intergenic | 35.0% | |
| AATGCTCTTCTAACTATGGT+AGG | - | chr4.1:47692321-47692340 | MS.gene61623:intron | 35.0% | |
| ACAAGGACAAGATAATTCTG+CGG | - | chr4.1:47695083-47695102 | MS.gene61623:intron | 35.0% | |
| ACAGAAAGTAAATTCGTAGC+AGG | + | chr4.1:47692266-47692285 | None:intergenic | 35.0% | |
| ACATGGCATCTTCATTTCAA+GGG | - | chr4.1:47693667-47693686 | MS.gene61623:intron | 35.0% | |
| ACCAGAGAACTTGGATAAAA+TGG | - | chr4.1:47694909-47694928 | MS.gene61623:intron | 35.0% | |
| ACTTCAGAAAATGCTTGACA+TGG | - | chr4.1:47693650-47693669 | MS.gene61623:intron | 35.0% | |
| AGCCCAAATAATTGAGGAAA+AGG | + | chr4.1:47691503-47691522 | None:intergenic | 35.0% | |
| ATATGATGCAAAGAACCTCA+AGG | - | chr4.1:47692351-47692370 | MS.gene61623:intron | 35.0% | |
| ATGCATAAAAGAAGGTTCTG+AGG | - | chr4.1:47692035-47692054 | MS.gene61623:CDS | 35.0% | |
| ATGGTTTAGATTTGCAACAC+GGG | - | chr4.1:47695255-47695274 | MS.gene61623:intron | 35.0% | |
| ATGTATCCTAATACTACAGG+AGG | + | chr4.1:47695325-47695344 | None:intergenic | 35.0% | |
| ATTGTCTTCACAGATGCTTT+GGG | - | chr4.1:47695451-47695470 | MS.gene61623:intron | 35.0% | |
| CAATTATTTGGGCTTCAAGA+AGG | - | chr4.1:47691509-47691528 | MS.gene61623:intron | 35.0% | |
| CAGGTCAAATATCAATTGAG+TGG | - | chr4.1:47691142-47691161 | MS.gene61623:intron | 35.0% | |
| CATCTGTGAAGACAATGAAA+AGG | + | chr4.1:47695447-47695466 | None:intergenic | 35.0% | |
| CATGGTTTAGATTTGCAACA+CGG | - | chr4.1:47695254-47695273 | MS.gene61623:intron | 35.0% | |
| CGTATCAACTCCTTTATTAG+AGG | + | chr4.1:47692844-47692863 | None:intergenic | 35.0% | |
| CTCATATACTCTCTCACATT+TGG | + | chr4.1:47695045-47695064 | None:intergenic | 35.0% | |
| CTGAACAGTTAAAGCATACA+CGG | - | chr4.1:47691035-47691054 | MS.gene61623:intron | 35.0% | |
| CTTCAAGAAGGATCCATAAA+TGG | - | chr4.1:47691521-47691540 | MS.gene61623:intron | 35.0% | |
| GAAATGGCATCCTTACTAAA+AGG | - | chr4.1:47693831-47693850 | MS.gene61623:intron | 35.0% | |
| GAAATGTTCTTCACAGTCAA+GGG | - | chr4.1:47691746-47691765 | MS.gene61623:CDS | 35.0% | |
| GAGGATGCTTTAATCATATC+TGG | + | chr4.1:47693600-47693619 | None:intergenic | 35.0% | |
| GATAGAATGAATGGTCTGAT+CGG | - | chr4.1:47691577-47691596 | MS.gene61623:intron | 35.0% | |
| GCCCAAATAATTGAGGAAAA+GGG | + | chr4.1:47691502-47691521 | None:intergenic | 35.0% | |
| GGTCAAATATCAATTGAGTG+GGG | - | chr4.1:47691144-47691163 | MS.gene61623:intron | 35.0% | |
| GTCATCAACTGTTTGTTTCA+GGG | - | chr4.1:47693027-47693046 | MS.gene61623:intron | 35.0% | |
| GTTTAAATTCCGCTACACAA+CGG | - | chr4.1:47690509-47690528 | MS.gene61623:intron | 35.0% | |
| TAATTACAGAAGAGGAATGG+AGG | + | chr4.1:47692889-47692908 | None:intergenic | 35.0% | |
| TAGAGCCATAAATTTAAGGG+AGG | + | chr4.1:47693148-47693167 | None:intergenic | 35.0% | |
| TATGCATTGTATCAGAGTAG+AGG | + | chr4.1:47692225-47692244 | None:intergenic | 35.0% | |
| TCCAAACTTCTTGTATCCTT+CGG | + | chr4.1:47691293-47691312 | None:intergenic | 35.0% | |
| TCTTGAAGCCCAAATAATTG+AGG | + | chr4.1:47691509-47691528 | None:intergenic | 35.0% | |
| TGCACCTAAGATTAACAAGA+TGG | - | chr4.1:47694987-47695006 | MS.gene61623:intron | 35.0% | |
| TGCAGAATAACAAACACGTT+GGG | - | chr4.1:47695161-47695180 | MS.gene61623:intron | 35.0% | |
| TGCATTGCTCAAATCAGAAA+CGG | + | chr4.1:47692522-47692541 | None:intergenic | 35.0% | |
| TGTATGCTTTAACTGTTCAG+CGG | + | chr4.1:47691035-47691054 | None:intergenic | 35.0% | |
| TGTCATCAACTGTTTGTTTC+AGG | - | chr4.1:47693026-47693045 | MS.gene61623:intron | 35.0% | |
| TGTTGCAAATCTAAACCATG+CGG | + | chr4.1:47695254-47695273 | None:intergenic | 35.0% | |
| TTAGAGATATATCACGGACA+TGG | - | chr4.1:47695376-47695395 | MS.gene61623:intron | 35.0% | |
| TTCCTTTATCAACTGTTCCT+TGG | + | chr4.1:47693056-47693075 | None:intergenic | 35.0% | |
| TTGGGAAAATTTATCAGCCA+AGG | - | chr4.1:47692147-47692166 | MS.gene61623:CDS | 35.0% | |
| TTTGCAGATGTTCACATCAA+TGG | - | chr4.1:47694780-47694799 | MS.gene61623:CDS | 35.0% | |
| ! | ACCATTTTATCCAAGTTCTC+TGG | + | chr4.1:47694913-47694932 | None:intergenic | 35.0% |
| ! | AGTTGGAATTTTCGTAAACG+TGG | - | chr4.1:47693417-47693436 | MS.gene61623:intron | 35.0% |
| ! | ATTTGGTTTCAAGCTTTCAC+CGG | - | chr4.1:47694846-47694865 | MS.gene61623:intron | 35.0% |
| ! | CACATTCCGATTTTTCATGA+TGG | - | chr4.1:47691382-47691401 | MS.gene61623:intron | 35.0% |
| ! | CATTAGAGTTTGGAGTAAAC+TGG | - | chr4.1:47692977-47692996 | MS.gene61623:intron | 35.0% |
| ! | CTTTAATGTTTTCCTTAGCC+TGG | + | chr4.1:47691927-47691946 | None:intergenic | 35.0% |
| ! | GTTGGAATTTTCGTAAACGT+GGG | - | chr4.1:47693418-47693437 | MS.gene61623:intron | 35.0% |
| ! | TCTGAGATTTACTTTCATCC+TGG | - | chr4.1:47694635-47694654 | MS.gene61623:CDS | 35.0% |
| ! | TGCAATATGCATGCTCATTT+TGG | - | chr4.1:47695550-47695569 | MS.gene61623:CDS | 35.0% |
| !! | AAAGCATCCTCTGAAATGAT+TGG | - | chr4.1:47693609-47693628 | MS.gene61623:intron | 35.0% |
| !! | AACAGTTGATGACATCAAAC+AGG | + | chr4.1:47693020-47693039 | None:intergenic | 35.0% |
| !! | AAGGAACAGTTGATAAAGGA+AGG | - | chr4.1:47693055-47693074 | MS.gene61623:intron | 35.0% |
| !! | AATGCAGTTGAAGTGTCTTT+TGG | - | chr4.1:47692536-47692555 | MS.gene61623:CDS | 35.0% |
| !! | AGAAGAAAAAAAAGGTGCCA+AGG | + | chr4.1:47691830-47691849 | None:intergenic | 35.0% |
| !! | GGTTTTTCAGCAGAAAAGTT+GGG | + | chr4.1:47691456-47691475 | None:intergenic | 35.0% |
| !! | GTAAACTGGTCTTTAGAGTT+TGG | - | chr4.1:47692991-47693010 | MS.gene61623:intron | 35.0% |
| !! | TACCAAGGAACAGTTGATAA+AGG | - | chr4.1:47693051-47693070 | MS.gene61623:intron | 35.0% |
| !! | TGGTTTTTCAGCAGAAAAGT+TGG | + | chr4.1:47691457-47691476 | None:intergenic | 35.0% |
| !!! | CTGTTTTGTTTAACACGAGA+AGG | - | chr4.1:47694379-47694398 | MS.gene61623:intron | 35.0% |
| !!! | GAAGAGTCACCAAACTTTTT+TGG | + | chr4.1:47693308-47693327 | None:intergenic | 35.0% |
| !!! | GCGGCAATTTTAAAATCTTG+AGG | + | chr4.1:47691016-47691035 | None:intergenic | 35.0% |
| !!! | TGTTTTTTGAAGCTGAGTCT+TGG | - | chr4.1:47690834-47690853 | MS.gene61623:intron | 35.0% |
| !!! | TTTTGGCTTTCATTCTTCAC+CGG | - | chr4.1:47695567-47695586 | MS.gene61623:CDS | 35.0% |
| AAAAAGATCCAGAAGCCATC+AGG | - | chr4.1:47693393-47693412 | MS.gene61623:CDS | 40.0% | |
| AAAACATGAAACGCAAGCCA+TGG | - | chr4.1:47691219-47691238 | MS.gene61623:intron | 40.0% | |
| AACCAAATCATGAAGCCTTG+AGG | - | chr4.1:47691472-47691491 | MS.gene61623:intron | 40.0% | |
| AAGATGGTAAGATGAAGGTG+TGG | - | chr4.1:47695003-47695022 | MS.gene61623:intron | 40.0% | |
| ACGCTAGACTAGACAGAAAT+TGG | + | chr4.1:47691693-47691712 | None:intergenic | 40.0% | |
| ACTTGAAGCTTACATGTAGC+TGG | + | chr4.1:47692414-47692433 | None:intergenic | 40.0% | |
| AGAACAAAGAACTGGTTGCT+AGG | - | chr4.1:47695509-47695528 | MS.gene61623:intron | 40.0% | |
| AGAGATGCGAGTATGTGAAA+GGG | + | chr4.1:47692602-47692621 | None:intergenic | 40.0% | |
| AGATGAAAGATCCAGCTATG+CGG | - | chr4.1:47694051-47694070 | MS.gene61623:intron | 40.0% | |
| AGGAACCTCCTCCAAAAAAT+GGG | + | chr4.1:47693698-47693717 | None:intergenic | 40.0% | |
| AGGGTGTACTACGAAAATTG+TGG | + | chr4.1:47691323-47691342 | None:intergenic | 40.0% | |
| ATACTTGAGGATGGGAAGTT+TGG | + | chr4.1:47694005-47694024 | None:intergenic | 40.0% | |
| ATCCAAGTTCTCTGGTGATA+AGG | + | chr4.1:47694905-47694924 | None:intergenic | 40.0% | |
| ATCCTTATCACCAGAGAACT+TGG | - | chr4.1:47694900-47694919 | MS.gene61623:intron | 40.0% | |
| ATCTTCTTAAGCTCATCTGG+TGG | + | chr4.1:47693807-47693826 | None:intergenic | 40.0% | |
| CATAGCTGGATCTTTCATCT+GGG | + | chr4.1:47694051-47694070 | None:intergenic | 40.0% | |
| CATATCTGGAGACACATCTT+TGG | + | chr4.1:47693586-47693605 | None:intergenic | 40.0% | |
| CATCTTGCCAATCATTTCAG+AGG | + | chr4.1:47693619-47693638 | None:intergenic | 40.0% | |
| CATGGCATCTTCATTTCAAG+GGG | - | chr4.1:47693668-47693687 | MS.gene61623:intron | 40.0% | |
| CATTGTCTTCACAGATGCTT+TGG | - | chr4.1:47695450-47695469 | MS.gene61623:intron | 40.0% | |
| CCATAAATTTAAGGGAGGCT+AGG | + | chr4.1:47693143-47693162 | None:intergenic | 40.0% | |
| CCTAGCCTCCCTTAAATTTA+TGG | - | chr4.1:47693140-47693159 | MS.gene61623:intron | 40.0% | |
| CGAAAATTCCAACTACCTGA+TGG | + | chr4.1:47693411-47693430 | None:intergenic | 40.0% | |
| GAAATTACCAACTACTCCCT+TGG | + | chr4.1:47694560-47694579 | None:intergenic | 40.0% | |
| GACATGGCATCTTCATTTCA+AGG | - | chr4.1:47693666-47693685 | MS.gene61623:intron | 40.0% | |
| GAGTAAATGAAGGGGTCAAA+AGG | + | chr4.1:47693121-47693140 | None:intergenic | 40.0% | |
| GATTTCGGATTCCCATTGTT+AGG | + | chr4.1:47693347-47693366 | None:intergenic | 40.0% | |
| GCACACCTCTTAAGAAAAGT+TGG | + | chr4.1:47694510-47694529 | None:intergenic | 40.0% | |
| GCATGCATATTGCAAAGACA+AGG | + | chr4.1:47695544-47695563 | None:intergenic | 40.0% | |
| GGAAATGTTCTTCACAGTCA+AGG | - | chr4.1:47691745-47691764 | MS.gene61623:CDS | 40.0% | |
| GGTCTGATCGGAAATATACA+TGG | - | chr4.1:47691589-47691608 | MS.gene61623:intron | 40.0% | |
| GTGCAGAATAACAAACACGT+TGG | - | chr4.1:47695160-47695179 | MS.gene61623:intron | 40.0% | |
| TATCACGGACATGGATATAG+AGG | - | chr4.1:47695385-47695404 | MS.gene61623:intron | 40.0% | |
| TCATCTGTTCTTGAGCGATT+CGG | + | chr4.1:47690197-47690216 | None:intergenic | 40.0% | |
| TCCGAAGGATACAAGAAGTT+TGG | - | chr4.1:47691289-47691308 | MS.gene61623:intron | 40.0% | |
| TCGTATGTCACCTGATGATA+TGG | - | chr4.1:47690218-47690237 | MS.gene61623:CDS | 40.0% | |
| TCTAATTCTCCTTTCAACCC+AGG | - | chr4.1:47693717-47693736 | MS.gene61623:CDS | 40.0% | |
| TGGTTGCATTTATTCTAGCC+AGG | + | chr4.1:47694127-47694146 | None:intergenic | 40.0% | |
| TGTTTGTTTCAGGGATACCA+AGG | - | chr4.1:47693036-47693055 | MS.gene61623:intron | 40.0% | |
| TTCCTCAAGGCTTCATGATT+TGG | + | chr4.1:47691477-47691496 | None:intergenic | 40.0% | |
| TTGATACGGCTGAAGTAAAC+TGG | - | chr4.1:47692856-47692875 | MS.gene61623:intron | 40.0% | |
| TTTAAGAAAAGGGGAGGACT+CGG | - | chr4.1:47692953-47692972 | MS.gene61623:intron | 40.0% | |
| ! | TGCTTTGCAGAAGTATAAGC+TGG | - | chr4.1:47691780-47691799 | MS.gene61623:CDS | 40.0% |
| ! | TGGGTTGAAAGGAGAATTAG+AGG | + | chr4.1:47693718-47693737 | None:intergenic | 40.0% |
| ! | TGTCCTGTTACTTGAAGACA+AGG | - | chr4.1:47692001-47692020 | MS.gene61623:CDS | 40.0% |
| ! | TTGCAGAAGTATAAGCTGGT+AGG | - | chr4.1:47691784-47691803 | MS.gene61623:CDS | 40.0% |
| ! | TTGGCATTCCTCGCATTTTT+CGG | + | chr4.1:47694353-47694372 | None:intergenic | 40.0% |
| !! | ACGTGTTTGTTATTCTGCAC+AGG | + | chr4.1:47695160-47695179 | None:intergenic | 40.0% |
| !! | GAACAGTTGATAAAGGAAGG+TGG | - | chr4.1:47693058-47693077 | MS.gene61623:intron | 40.0% |
| !! | GAAGAGCATTAATGCATTGC+TGG | + | chr4.1:47692311-47692330 | None:intergenic | 40.0% |
| !! | TAATCCAGAGTTGATGAGGA+TGG | - | chr4.1:47690964-47690983 | MS.gene61623:CDS | 40.0% |
| !! | TCAAAGTGTCGCTGAGAATT+GGG | - | chr4.1:47691352-47691371 | MS.gene61623:intron | 40.0% |
| !! | TGTCTAATCCAGAGTTGATG+AGG | - | chr4.1:47690960-47690979 | MS.gene61623:CDS | 40.0% |
| !! | TTCAAAGTGTCGCTGAGAAT+TGG | - | chr4.1:47691351-47691370 | MS.gene61623:intron | 40.0% |
| !!! | AGCATTTTCTGAAGTTCCTC+AGG | + | chr4.1:47693645-47693664 | None:intergenic | 40.0% |
| AAATATGAGCCCGGAAGTGA+TGG | - | chr4.1:47694807-47694826 | MS.gene61623:intron | 45.0% | |
| AACTGGTTGCTAGGAAGATC+AGG | - | chr4.1:47695518-47695537 | MS.gene61623:CDS | 45.0% | |
| ACAAGTGCACAACATTGACC+AGG | + | chr4.1:47694656-47694675 | None:intergenic | 45.0% | |
| AGCTACCAATGAAACCTGAC+CGG | + | chr4.1:47695589-47695608 | None:intergenic | 45.0% | |
| ATTTGACCCAAGGGAGTAGT+TGG | - | chr4.1:47694550-47694569 | MS.gene61623:intron | 45.0% | |
| CACAGCTTACATGTTGGAGA+TGG | + | chr4.1:47692119-47692138 | None:intergenic | 45.0% | |
| CACATACTCGCATCTCTCAT+AGG | - | chr4.1:47692605-47692624 | MS.gene61623:intron | 45.0% | |
| CATGGCACAAAAATCTGCCA+TGG | - | chr4.1:47695226-47695245 | MS.gene61623:intron | 45.0% | |
| CTCAAGGCTCTTTATCGAAG+AGG | - | chr4.1:47692367-47692386 | MS.gene61623:CDS | 45.0% | |
| CTCTTCGATAAAGAGCCTTG+AGG | + | chr4.1:47692369-47692388 | None:intergenic | 45.0% | |
| CTGCCTTGTCTTCAAGTAAC+AGG | + | chr4.1:47692007-47692026 | None:intergenic | 45.0% | |
| GAAGGGGTCAAAAGGAAAAG+AGG | + | chr4.1:47693113-47693132 | None:intergenic | 45.0% | |
| GAGAGATGCGAGTATGTGAA+AGG | + | chr4.1:47692603-47692622 | None:intergenic | 45.0% | |
| GAGGAACCTCCTCCAAAAAA+TGG | + | chr4.1:47693699-47693718 | None:intergenic | 45.0% | |
| GAGGCTAGGAGTAAATGAAG+GGG | + | chr4.1:47693129-47693148 | None:intergenic | 45.0% | |
| GAGTCTTGGTACGTAGGATT+AGG | - | chr4.1:47690848-47690867 | MS.gene61623:CDS | 45.0% | |
| GCAAACATGGGAGAGCAATT+TGG | - | chr4.1:47694829-47694848 | MS.gene61623:intron | 45.0% | |
| GCATAGCTGGATCTTTCATC+TGG | + | chr4.1:47694052-47694071 | None:intergenic | 45.0% | |
| GCTATAACACCGTTGTGTAG+CGG | + | chr4.1:47690521-47690540 | None:intergenic | 45.0% | |
| GGAGGCTAGGAGTAAATGAA+GGG | + | chr4.1:47693130-47693149 | None:intergenic | 45.0% | |
| GGGTCAAAAGGAAAAGAGGA+GGG | + | chr4.1:47693109-47693128 | None:intergenic | 45.0% | |
| GGTCAAAAGGAAAAGAGGAG+GGG | + | chr4.1:47693108-47693127 | None:intergenic | 45.0% | |
| GGTCAAGCGTATAAGGAACT+AGG | - | chr4.1:47692388-47692407 | MS.gene61623:CDS | 45.0% | |
| GTGACATGAGATGAATCCGA+AGG | - | chr4.1:47691274-47691293 | MS.gene61623:intron | 45.0% | |
| TATTCCATCATCAGCAGCTG+TGG | - | chr4.1:47693863-47693882 | MS.gene61623:intron | 45.0% | |
| TATTCTAGCCAGGCATGTAG+AGG | + | chr4.1:47694117-47694136 | None:intergenic | 45.0% | |
| TCGAAGAGGTCAAGCGTATA+AGG | - | chr4.1:47692381-47692400 | MS.gene61623:CDS | 45.0% | |
| TGTCACCTGATGATATGGCT+CGG | - | chr4.1:47690223-47690242 | MS.gene61623:CDS | 45.0% | |
| TTTAAAGAAGCCAGAGTGGC+AGG | + | chr4.1:47693552-47693571 | None:intergenic | 45.0% | |
| ! | AAACATATCGGGTGTCACGT+TGG | + | chr4.1:47693754-47693773 | None:intergenic | 45.0% |
| ! | AACATATCGGGTGTCACGTT+GGG | + | chr4.1:47693753-47693772 | None:intergenic | 45.0% |
| ! | ACGCATAGCTGCTACTTCTT+CGG | + | chr4.1:47691107-47691126 | None:intergenic | 45.0% |
| ! | AGGACTCGGTCATTAGAGTT+TGG | - | chr4.1:47692967-47692986 | MS.gene61623:intron | 45.0% |
| ! | ATGGCATTCCTGGTTTGTGT+AGG | - | chr4.1:47692493-47692512 | MS.gene61623:CDS | 45.0% |
| ! | GAGGAAAAGGGTTTTCCTCA+AGG | + | chr4.1:47691490-47691509 | None:intergenic | 45.0% |
| ! | GGAATAGATCCTGGGTTGAA+AGG | + | chr4.1:47693729-47693748 | None:intergenic | 45.0% |
| ! | TGAGCGATTCGGATCAAATC+AGG | + | chr4.1:47690186-47690205 | None:intergenic | 45.0% |
| !! | CAGCTTCTGTTGTTTCCAGA+AGG | + | chr4.1:47693260-47693279 | None:intergenic | 45.0% |
| !! | TGAGCTTTTGCTGCTTCTTC+CGG | + | chr4.1:47694868-47694887 | None:intergenic | 45.0% |
| !!! | CAAGGGGACAACCCATTTTT+TGG | - | chr4.1:47693684-47693703 | MS.gene61623:intron | 45.0% |
| !!! | GACAACCCATTTTTTGGAGG+AGG | - | chr4.1:47693690-47693709 | MS.gene61623:intron | 45.0% |
| !! | ATATAATATACAAATATAAT+TGG | + | chr4.1:47694329-47694348 | None:intergenic | 5.0% |
| !!! | ATATAAAATTAAATTTTACA+GGG | - | chr4.1:47691724-47691743 | MS.gene61623:CDS | 5.0% |
| AAATGTCGATCCTGCCACTC+TGG | - | chr4.1:47693539-47693558 | MS.gene61623:intron | 50.0% | |
| AACGGCTTCCTACACAAACC+AGG | + | chr4.1:47692504-47692523 | None:intergenic | 50.0% | |
| ACGTTGGGAGGAATAGATCC+TGG | + | chr4.1:47693738-47693757 | None:intergenic | 50.0% | |
| AGAAGCAGCAAAAGCTCAGC+AGG | - | chr4.1:47694870-47694889 | MS.gene61623:intron | 50.0% | |
| AGAGGAGGGGAACATACTTC+TGG | + | chr4.1:47693095-47693114 | None:intergenic | 50.0% | |
| AGCAGTCCCAGTGTTTCCAA+TGG | - | chr4.1:47695192-47695211 | MS.gene61623:intron | 50.0% | |
| AGTGTTTCCAATGGGTGGGA+TGG | - | chr4.1:47695201-47695220 | MS.gene61623:intron | 50.0% | |
| ATCCCACCCATTGGAAACAC+TGG | + | chr4.1:47695202-47695221 | None:intergenic | 50.0% | |
| CACTGGTATACGGGACTAGA+GGG | + | chr4.1:47694190-47694209 | None:intergenic | 50.0% | |
| CCAATCTCAGCCATCTCTTC+AGG | + | chr4.1:47691061-47691080 | None:intergenic | 50.0% | |
| CCATGTTTGCCATCACTTCC+GGG | + | chr4.1:47694819-47694838 | None:intergenic | 50.0% | |
| CCCATGTTTGCCATCACTTC+CGG | + | chr4.1:47694820-47694839 | None:intergenic | 50.0% | |
| CCGGAAGTGATGGCAAACAT+GGG | - | chr4.1:47694817-47694836 | MS.gene61623:intron | 50.0% | |
| CCTGAAGAGATGGCTGAGAT+TGG | - | chr4.1:47691058-47691077 | MS.gene61623:intron | 50.0% | |
| CGTTGGGAGGAATAGATCCT+GGG | + | chr4.1:47693737-47693756 | None:intergenic | 50.0% | |
| CTTCACCGGTCAGGTTTCAT+TGG | - | chr4.1:47695581-47695600 | MS.gene61623:CDS | 50.0% | |
| GAAGACGAGAATGTGCCTTC+TGG | - | chr4.1:47693242-47693261 | MS.gene61623:intron | 50.0% | |
| GAAGCCATCCTCATCAACTC+TGG | + | chr4.1:47690971-47690990 | None:intergenic | 50.0% | |
| GAAGCTGAGTCTTGGTACGT+AGG | - | chr4.1:47690842-47690861 | MS.gene61623:CDS | 50.0% | |
| GAGGAGGGGAACATACTTCT+GGG | + | chr4.1:47693094-47693113 | None:intergenic | 50.0% | |
| GATTGGCAAGATGTCACCTG+AGG | - | chr4.1:47693626-47693645 | MS.gene61623:intron | 50.0% | |
| GCAGTCCCAGTGTTTCCAAT+GGG | - | chr4.1:47695193-47695212 | MS.gene61623:intron | 50.0% | |
| GCTTTCATTCTTCACCGGTC+AGG | - | chr4.1:47695572-47695591 | MS.gene61623:CDS | 50.0% | |
| GGCTGAGATGTTGAAGAACC+AGG | - | chr4.1:47691165-47691184 | MS.gene61623:intron | 50.0% | |
| GGGAGGCTAGGAGTAAATGA+AGG | + | chr4.1:47693131-47693150 | None:intergenic | 50.0% | |
| GGGGTCAAAAGGAAAAGAGG+AGG | + | chr4.1:47693110-47693129 | None:intergenic | 50.0% | |
| TCACTGGTATACGGGACTAG+AGG | + | chr4.1:47694191-47694210 | None:intergenic | 50.0% | |
| TCATCAGTGCCATGCCTAGT+AGG | - | chr4.1:47695288-47695307 | MS.gene61623:intron | 50.0% | |
| TCCAACTACCTGATGGCTTC+TGG | + | chr4.1:47693404-47693423 | None:intergenic | 50.0% | |
| TCCAGAAGCCATCAGGTAGT+TGG | - | chr4.1:47693400-47693419 | MS.gene61623:CDS | 50.0% | |
| TCCCACCCATTGGAAACACT+GGG | + | chr4.1:47695201-47695220 | None:intergenic | 50.0% | |
| TCCCAGTGTTTCCAATGGGT+GGG | - | chr4.1:47695197-47695216 | MS.gene61623:intron | 50.0% | |
| TGGATCCGAGCCATATCATC+AGG | + | chr4.1:47690231-47690250 | None:intergenic | 50.0% | |
| TTGTCCACAGCTGCTGATGA+TGG | + | chr4.1:47693870-47693889 | None:intergenic | 50.0% | |
| ! | AAAAGCACGAGTGGTGCTTG+AGG | + | chr4.1:47693928-47693947 | None:intergenic | 50.0% |
| ! | CGCATAGCTGCTACTTCTTC+GGG | + | chr4.1:47691106-47691125 | None:intergenic | 50.0% |
| ! | GATGAAGGTGTGGCCATACT+AGG | - | chr4.1:47695013-47695032 | MS.gene61623:intron | 50.0% |
| ! | GGCTGAGATTGGTCAGAAGA+TGG | - | chr4.1:47691069-47691088 | MS.gene61623:intron | 50.0% |
| ! | GTCTTCACAGATGCTTTGGG+CGG | - | chr4.1:47695454-47695473 | MS.gene61623:intron | 50.0% |
| ! | TCAAGCACCACTCGTGCTTT+TGG | - | chr4.1:47693927-47693946 | MS.gene61623:intron | 50.0% |
| ! | TGGTTCTCCAAAAGCACGAG+TGG | + | chr4.1:47693937-47693956 | None:intergenic | 50.0% |
| !! | CATGGCACTGATGACATGCT+AGG | + | chr4.1:47695282-47695301 | None:intergenic | 50.0% |
| !!! | GGGGACAACCCATTTTTTGG+AGG | - | chr4.1:47693687-47693706 | MS.gene61623:intron | 50.0% |
| ATCTAAACCATGCGGCGCCA+TGG | + | chr4.1:47695246-47695265 | None:intergenic | 55.0% | |
| CACGAGTGGTGCTTGAGGAT+GGG | + | chr4.1:47693923-47693942 | None:intergenic | 55.0% | |
| CCATGCCTAGTAGGACCATG+GGG | - | chr4.1:47695297-47695316 | MS.gene61623:intron | 55.0% | |
| CCCGGAAGTGATGGCAAACA+TGG | - | chr4.1:47694816-47694835 | MS.gene61623:intron | 55.0% | |
| CTAGCCAGGCATGTAGAGGA+AGG | + | chr4.1:47694113-47694132 | None:intergenic | 55.0% | |
| GAAAGATCCAGCTATGCGGC+AGG | - | chr4.1:47694055-47694074 | MS.gene61623:intron | 55.0% | |
| GAACATACCTGCCGCATAGC+TGG | + | chr4.1:47694065-47694084 | None:intergenic | 55.0% | |
| GCATACACGGCCTGAAGAGA+TGG | - | chr4.1:47691048-47691067 | MS.gene61623:intron | 55.0% | |
| GCATCCTTCCTCTACATGCC+TGG | - | chr4.1:47694106-47694125 | MS.gene61623:intron | 55.0% | |
| GCCATGCCTAGTAGGACCAT+GGG | - | chr4.1:47695296-47695315 | MS.gene61623:intron | 55.0% | |
| GTCCCAGTGTTTCCAATGGG+TGG | - | chr4.1:47695196-47695215 | MS.gene61623:intron | 55.0% | |
| TGCCATGCCTAGTAGGACCA+TGG | - | chr4.1:47695295-47695314 | MS.gene61623:intron | 55.0% | |
| TGGGCGGATAGGCTTCAAAG+AGG | - | chr4.1:47695470-47695489 | MS.gene61623:intron | 55.0% | |
| ! | ATATCGGGTGTCACGTTGGG+AGG | + | chr4.1:47693750-47693769 | None:intergenic | 55.0% |
| ! | CACAGATGCTTTGGGCGGAT+AGG | - | chr4.1:47695459-47695478 | MS.gene61623:intron | 55.0% |
| ! | GGGGTGCCTCCTGTAGTATT+AGG | - | chr4.1:47695316-47695335 | MS.gene61623:intron | 55.0% |
| ! | TATGGCTCGGATCCAGCAAC+AGG | - | chr4.1:47690236-47690255 | MS.gene61623:CDS | 55.0% |
| !! | ATACTACAGGAGGCACCCCA+TGG | + | chr4.1:47695315-47695334 | None:intergenic | 55.0% |
| AAATCTGCCATGGCGCCGCA+TGG | - | chr4.1:47695236-47695255 | MS.gene61623:intron | 60.0% | |
| AGGCACCCCATGGTCCTACT+AGG | + | chr4.1:47695305-47695324 | None:intergenic | 60.0% | |
| CCAATGGGTGGGATGGCACA+TGG | - | chr4.1:47695208-47695227 | MS.gene61623:intron | 60.0% | |
| CCATGTGCCATCCCACCCAT+TGG | + | chr4.1:47695211-47695230 | None:intergenic | 60.0% | |
| CCCCATGGTCCTACTAGGCA+TGG | + | chr4.1:47695300-47695319 | None:intergenic | 60.0% | |
| GCACGAGTGGTGCTTGAGGA+TGG | + | chr4.1:47693924-47693943 | None:intergenic | 60.0% | |
| GCGTGCTCATGCTGATGCTC+AGG | - | chr4.1:47691123-47691142 | MS.gene61623:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 47690162 | 47695610 | 47690162 | ID=MS.gene61623 |
| chr4.1 | mRNA | 47690162 | 47695610 | 47690162 | ID=MS.gene61623.t1;Parent=MS.gene61623 |
| chr4.1 | exon | 47695515 | 47695610 | 47695515 | ID=MS.gene61623.t1.exon1;Parent=MS.gene61623.t1 |
| chr4.1 | CDS | 47695515 | 47695610 | 47695515 | ID=cds.MS.gene61623.t1;Parent=MS.gene61623.t1 |
| chr4.1 | exon | 47694586 | 47694816 | 47694586 | ID=MS.gene61623.t1.exon2;Parent=MS.gene61623.t1 |
| chr4.1 | CDS | 47694586 | 47694816 | 47694586 | ID=cds.MS.gene61623.t1;Parent=MS.gene61623.t1 |
| chr4.1 | exon | 47693971 | 47694027 | 47693971 | ID=MS.gene61623.t1.exon3;Parent=MS.gene61623.t1 |
| chr4.1 | CDS | 47693971 | 47694027 | 47693971 | ID=cds.MS.gene61623.t1;Parent=MS.gene61623.t1 |
| chr4.1 | exon | 47693716 | 47693844 | 47693716 | ID=MS.gene61623.t1.exon4;Parent=MS.gene61623.t1 |
| chr4.1 | CDS | 47693716 | 47693844 | 47693716 | ID=cds.MS.gene61623.t1;Parent=MS.gene61623.t1 |
| chr4.1 | exon | 47693352 | 47693429 | 47693352 | ID=MS.gene61623.t1.exon5;Parent=MS.gene61623.t1 |
| chr4.1 | CDS | 47693352 | 47693429 | 47693352 | ID=cds.MS.gene61623.t1;Parent=MS.gene61623.t1 |
| chr4.1 | exon | 47693187 | 47693257 | 47693187 | ID=MS.gene61623.t1.exon6;Parent=MS.gene61623.t1 |
| chr4.1 | CDS | 47693187 | 47693257 | 47693187 | ID=cds.MS.gene61623.t1;Parent=MS.gene61623.t1 |
| chr4.1 | exon | 47692675 | 47692724 | 47692675 | ID=MS.gene61623.t1.exon7;Parent=MS.gene61623.t1 |
| chr4.1 | CDS | 47692675 | 47692724 | 47692675 | ID=cds.MS.gene61623.t1;Parent=MS.gene61623.t1 |
| chr4.1 | exon | 47692358 | 47692556 | 47692358 | ID=MS.gene61623.t1.exon8;Parent=MS.gene61623.t1 |
| chr4.1 | CDS | 47692358 | 47692556 | 47692358 | ID=cds.MS.gene61623.t1;Parent=MS.gene61623.t1 |
| chr4.1 | exon | 47691696 | 47692254 | 47691696 | ID=MS.gene61623.t1.exon9;Parent=MS.gene61623.t1 |
| chr4.1 | CDS | 47691696 | 47692254 | 47691696 | ID=cds.MS.gene61623.t1;Parent=MS.gene61623.t1 |
| chr4.1 | exon | 47690842 | 47690985 | 47690842 | ID=MS.gene61623.t1.exon10;Parent=MS.gene61623.t1 |
| chr4.1 | CDS | 47690842 | 47690985 | 47690842 | ID=cds.MS.gene61623.t1;Parent=MS.gene61623.t1 |
| chr4.1 | exon | 47690162 | 47690308 | 47690162 | ID=MS.gene61623.t1.exon11;Parent=MS.gene61623.t1 |
| chr4.1 | CDS | 47690162 | 47690308 | 47690162 | ID=cds.MS.gene61623.t1;Parent=MS.gene61623.t1 |
| Gene Sequence |
| Protein sequence |
