Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61650.t1 | XP_013455729.1 | 96.7 | 395 | 13 | 0 | 1 | 395 | 19 | 413 | 6.30E-212 | 746.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61650.t1 | Q9SF15 | 35.3 | 434 | 228 | 9 | 1 | 392 | 23 | 445 | 5.1e-61 | 236.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61650.t1 | A0A072UV60 | 96.7 | 395 | 13 | 0 | 1 | 395 | 19 | 413 | 4.5e-212 | 746.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055551 | MS.gene61650 | 0.80559 | 1.24E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61650.t1 | MTR_4g051515 | 96.709 | 395 | 13 | 0 | 1 | 395 | 19 | 413 | 0.0 | 786 |
MS.gene61650.t1 | MTR_1g056910 | 43.928 | 387 | 208 | 7 | 1 | 385 | 19 | 398 | 5.86e-101 | 305 |
MS.gene61650.t1 | MTR_1g056870 | 37.530 | 421 | 228 | 8 | 1 | 393 | 20 | 433 | 8.64e-86 | 268 |
MS.gene61650.t1 | MTR_1g056880 | 37.292 | 421 | 229 | 8 | 1 | 393 | 20 | 433 | 1.81e-85 | 267 |
MS.gene61650.t1 | MTR_7g106340 | 39.066 | 407 | 224 | 9 | 1 | 393 | 21 | 417 | 5.71e-85 | 265 |
MS.gene61650.t1 | MTR_6g462610 | 64.455 | 211 | 32 | 2 | 99 | 309 | 1 | 168 | 4.45e-84 | 254 |
MS.gene61650.t1 | MTR_1g036770 | 77.632 | 152 | 24 | 1 | 99 | 250 | 1 | 142 | 8.27e-76 | 232 |
MS.gene61650.t1 | MTR_2g087350 | 38.131 | 396 | 230 | 8 | 1 | 393 | 19 | 402 | 1.40e-73 | 235 |
MS.gene61650.t1 | MTR_0006s0210 | 78.231 | 147 | 22 | 1 | 99 | 245 | 1 | 137 | 3.41e-72 | 223 |
MS.gene61650.t1 | MTR_1g056840 | 34.204 | 421 | 216 | 10 | 1 | 393 | 20 | 407 | 7.25e-68 | 220 |
MS.gene61650.t1 | MTR_1g037060 | 82.243 | 107 | 18 | 1 | 99 | 205 | 1 | 106 | 2.52e-52 | 170 |
MS.gene61650.t1 | MTR_1g037070 | 72.840 | 81 | 22 | 0 | 257 | 337 | 1 | 81 | 7.22e-31 | 113 |
MS.gene61650.t1 | MTR_5g077510 | 27.456 | 397 | 262 | 14 | 1 | 386 | 48 | 429 | 1.53e-27 | 113 |
MS.gene61650.t1 | MTR_3g065080 | 25.313 | 399 | 267 | 12 | 1 | 386 | 49 | 429 | 4.01e-27 | 112 |
MS.gene61650.t1 | MTR_6g071340 | 25.373 | 402 | 248 | 16 | 1 | 374 | 18 | 395 | 1.89e-24 | 104 |
MS.gene61650.t1 | MTR_5g048050 | 25.641 | 390 | 262 | 15 | 1 | 374 | 38 | 415 | 6.72e-22 | 97.4 |
MS.gene61650.t1 | MTR_8g092870 | 25.962 | 416 | 250 | 14 | 1 | 388 | 23 | 408 | 8.67e-22 | 96.7 |
MS.gene61650.t1 | MTR_4g085720 | 26.633 | 398 | 242 | 14 | 1 | 379 | 27 | 393 | 1.00e-21 | 96.7 |
MS.gene61650.t1 | MTR_3g095730 | 25.806 | 403 | 265 | 17 | 1 | 388 | 26 | 409 | 1.70e-19 | 90.1 |
MS.gene61650.t1 | MTR_5g015210 | 22.306 | 399 | 273 | 11 | 1 | 392 | 80 | 448 | 1.03e-13 | 72.8 |
MS.gene61650.t1 | MTR_4g091880 | 24.031 | 387 | 242 | 13 | 1 | 374 | 18 | 365 | 6.19e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61650.t1 | AT3G11840 | 35.253 | 434 | 228 | 9 | 1 | 392 | 23 | 445 | 2.41e-75 | 241 |
MS.gene61650.t1 | AT2G35930 | 34.961 | 389 | 237 | 8 | 1 | 385 | 25 | 401 | 5.43e-72 | 231 |
MS.gene61650.t1 | AT3G52450 | 33.494 | 415 | 237 | 9 | 1 | 385 | 20 | 425 | 5.23e-66 | 216 |
MS.gene61650.t1 | AT3G19380 | 25.600 | 375 | 244 | 10 | 1 | 360 | 27 | 381 | 2.62e-25 | 107 |
MS.gene61650.t1 | AT1G66160 | 26.515 | 396 | 231 | 14 | 1 | 374 | 46 | 403 | 5.11e-23 | 100 |
MS.gene61650.t1 | AT1G49780 | 26.250 | 400 | 264 | 9 | 1 | 386 | 27 | 409 | 1.46e-22 | 99.0 |
MS.gene61650.t1 | AT5G37490 | 25.385 | 390 | 258 | 12 | 1 | 377 | 44 | 413 | 9.42e-18 | 85.1 |
MS.gene61650.t1 | AT3G18710 | 27.089 | 395 | 242 | 15 | 1 | 374 | 25 | 394 | 1.44e-15 | 78.2 |
MS.gene61650.t1 | AT5G09800 | 22.983 | 409 | 261 | 16 | 1 | 388 | 24 | 399 | 4.77e-15 | 76.6 |
MS.gene61650.t1 | AT1G66160 | 25.068 | 367 | 216 | 13 | 30 | 374 | 58 | 387 | 1.24e-14 | 75.5 |
MS.gene61650.t1 | AT5G64660 | 23.457 | 405 | 276 | 14 | 1 | 388 | 23 | 410 | 1.83e-13 | 72.0 |
MS.gene61650.t1 | AT3G02840 | 21.988 | 332 | 210 | 8 | 69 | 373 | 42 | 351 | 6.49e-11 | 63.9 |
Find 65 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACCGGACACACACAAATTT+TGG | 0.165373 | 4.1:-46997025 | None:intergenic |
ATTCTATTGAGAGGAGATTT+TGG | 0.189995 | 4.1:-46997168 | None:intergenic |
CAATGTTTAAATTTCCTAAA+AGG | 0.218436 | 4.1:-46997575 | None:intergenic |
CGCTGATTTAATAGCTTGTT+TGG | 0.241169 | 4.1:-46997646 | None:intergenic |
AGAGCTCGTGTTCAATCTTT+TGG | 0.292121 | 4.1:+46997785 | MS.gene61650:CDS |
TCAATTGTCAACTTTAATAA+TGG | 0.293900 | 4.1:-46997537 | None:intergenic |
AACTTATATTTGATCACCTT+TGG | 0.332063 | 4.1:-46998130 | None:intergenic |
TTGCATTACCATGCAAAGTT+TGG | 0.341146 | 4.1:-46998000 | None:intergenic |
GTCAAATACTCTGAACTTCT+TGG | 0.362730 | 4.1:-46997063 | None:intergenic |
ATTGATACTTGAAAGCGATT+AGG | 0.384604 | 4.1:-46997225 | None:intergenic |
GGTAGTGATTGATTTGTTAC+CGG | 0.384736 | 4.1:-46997042 | None:intergenic |
ATTTACCATCTCAAAATTGT+TGG | 0.385880 | 4.1:-46997505 | None:intergenic |
AGCCTTTGAAGTGTGTGATT+TGG | 0.399496 | 4.1:-46997087 | None:intergenic |
AATACCAATGGTTTAGAAGA+AGG | 0.409053 | 4.1:+46997360 | MS.gene61650:CDS |
AAGCTCAAGTTCAATGAGTT+CGG | 0.423341 | 4.1:-46997739 | None:intergenic |
CAAACCTTCTTCTAAACCAT+TGG | 0.423496 | 4.1:-46997364 | None:intergenic |
TTAGGTTACACTCCACTACT+TGG | 0.430565 | 4.1:+46998066 | MS.gene61650:CDS |
CCGCTTCCACGATCTTTGTT+CGG | 0.442234 | 4.1:-46997707 | None:intergenic |
CTTATAGAGACGTGCCCGTT+GGG | 0.444499 | 4.1:+46997678 | MS.gene61650:CDS |
AGCTCTGTCACATTCTTCTC+CGG | 0.450590 | 4.1:-46997768 | None:intergenic |
CCGAACAAAGATCGTGGAAG+CGG | 0.454134 | 4.1:+46997707 | MS.gene61650:CDS |
AATTGCTAGGTCATCGGTTG+TGG | 0.459481 | 4.1:-46997901 | None:intergenic |
ATTTCATCAACTCGTTGACT+TGG | 0.464491 | 4.1:+46997460 | MS.gene61650:CDS |
TAATCGCTTTCAAGTATCAA+TGG | 0.465271 | 4.1:+46997227 | MS.gene61650:CDS |
CATTGAATTCTTTGTAACAA+TGG | 0.474952 | 4.1:+46997593 | MS.gene61650:CDS |
CATTTGTGTTCGTGCGCGGA+TGG | 0.475091 | 4.1:+46997810 | MS.gene61650:CDS |
GTTAGAGTACTTAGAAAGAG+AGG | 0.479397 | 4.1:+46997615 | MS.gene61650:CDS |
CAACAACATGATGAAGCCTT+TGG | 0.491566 | 4.1:+46997422 | MS.gene61650:CDS |
TTGTTCGGTTTCTACCCAAC+GGG | 0.504938 | 4.1:-46997692 | None:intergenic |
AGAAAGCAAGAGACATACTT+AGG | 0.507558 | 4.1:+46998048 | MS.gene61650:CDS |
TGTAACAAAGGCTATGGTTA+TGG | 0.507831 | 4.1:+46997311 | MS.gene61650:CDS |
AACTTGATTATCAACCACCT+TGG | 0.511472 | 4.1:-46997139 | None:intergenic |
AACATGATGAAGCCTTTGGT+TGG | 0.517108 | 4.1:+46997426 | MS.gene61650:CDS |
AGCCAAAATTTGTGTGTGTC+CGG | 0.517453 | 4.1:+46997023 | MS.gene61650:CDS |
AGAATATGCATGGTTGAAGT+TGG | 0.517853 | 4.1:+46997288 | MS.gene61650:CDS |
AGTTGGTGTAACAAAGGCTA+TGG | 0.525042 | 4.1:+46997305 | MS.gene61650:CDS |
CAATTCATGAGGCATGGAGC+GGG | 0.541202 | 4.1:+46997840 | MS.gene61650:CDS |
CTCCAAATCACACACTTCAA+AGG | 0.542946 | 4.1:+46997085 | MS.gene61650:CDS |
AACAAGTACAATTGTATGCA+TGG | 0.543793 | 4.1:-46998098 | None:intergenic |
AGCGGTTTCCAAACTTTGCA+TGG | 0.544705 | 4.1:+46997992 | MS.gene61650:CDS |
ATACCAGTCACTGTTGTCAC+AGG | 0.546820 | 4.1:-46996961 | None:intergenic |
TTTGTTCGGTTTCTACCCAA+CGG | 0.552342 | 4.1:-46997693 | None:intergenic |
GAACCTGTGACAACAGTGAC+TGG | 0.554443 | 4.1:+46996958 | MS.gene61650:CDS |
TACTTGAATTGCTAGGTCAT+CGG | 0.558000 | 4.1:-46997907 | None:intergenic |
CTGAAAGTACTTGAATTGCT+AGG | 0.561724 | 4.1:-46997914 | None:intergenic |
AGAGAACAATTCATGAGGCA+TGG | 0.562315 | 4.1:+46997834 | MS.gene61650:CDS |
TGGAGAATTATTCCAAGTAG+TGG | 0.564996 | 4.1:-46998078 | None:intergenic |
TTCAAAGAAGGAAATACCAA+TGG | 0.571012 | 4.1:+46997348 | MS.gene61650:CDS |
CGAACAAAGATCGTGGAAGC+GGG | 0.572107 | 4.1:+46997708 | MS.gene61650:CDS |
TGAGAGAAATAGAATATGCA+TGG | 0.578775 | 4.1:+46997278 | MS.gene61650:CDS |
AAAGTTGACAATTGATGTTG+TGG | 0.586908 | 4.1:+46997545 | MS.gene61650:CDS |
GCTTATAGAGACGTGCCCGT+TGG | 0.587121 | 4.1:+46997677 | MS.gene61650:CDS |
TGAAGATGGATTCTATTGAG+AGG | 0.589853 | 4.1:-46997177 | None:intergenic |
TACAATTGTACTTGTTAACA+AGG | 0.596131 | 4.1:+46998105 | MS.gene61650:CDS |
AGAGATGTTGCAAGTTGGAG+CGG | 0.596852 | 4.1:+46997974 | MS.gene61650:CDS |
ACTTGTTAACAAGGCACCAA+AGG | 0.603108 | 4.1:+46998114 | MS.gene61650:CDS |
GGCACATTTGTGTTCGTGCG+CGG | 0.603860 | 4.1:+46997806 | MS.gene61650:CDS |
TTCAAAGGCTAATCAGAGCA+TGG | 0.608580 | 4.1:+46997100 | MS.gene61650:CDS |
ACAAAGATCGTGGAAGCGGG+TGG | 0.627722 | 4.1:+46997711 | MS.gene61650:CDS |
GGTTGAAGTTGGTGTAACAA+AGG | 0.630121 | 4.1:+46997299 | MS.gene61650:CDS |
ACAATTCATGAGGCATGGAG+CGG | 0.639945 | 4.1:+46997839 | MS.gene61650:CDS |
TTTATCAAATGAATCCAAGG+TGG | 0.659261 | 4.1:+46997125 | MS.gene61650:CDS |
TAGAAACCGAACAAAGATCG+TGG | 0.661750 | 4.1:+46997701 | MS.gene61650:CDS |
GCATAGCGATGATTTCGAAG+AGG | 0.666881 | 4.1:+46997862 | MS.gene61650:CDS |
ATGGAAGAGAACAATTCATG+AGG | 0.672194 | 4.1:+46997829 | MS.gene61650:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAAAAGAAATTCAAAGA+AGG | + | chr4.1:46997336-46997355 | MS.gene61650:CDS | 15.0% |
!! | CAATGTTTAAATTTCCTAAA+AGG | - | chr4.1:46997578-46997597 | None:intergenic | 20.0% |
!! | TCAATTGTCAACTTTAATAA+TGG | - | chr4.1:46997540-46997559 | None:intergenic | 20.0% |
!!! | ATAGAAAAAGCATTGAAAAA+TGG | + | chr4.1:46996992-46997011 | MS.gene61650:CDS | 20.0% |
! | ATTTACCATCTCAAAATTGT+TGG | - | chr4.1:46997508-46997527 | None:intergenic | 25.0% |
! | CATTGAATTCTTTGTAACAA+TGG | + | chr4.1:46997593-46997612 | MS.gene61650:CDS | 25.0% |
!! | GATTTTATCAAATGAATCCA+AGG | + | chr4.1:46997122-46997141 | MS.gene61650:CDS | 25.0% |
!! | TACAATTGTACTTGTTAACA+AGG | + | chr4.1:46998105-46998124 | MS.gene61650:CDS | 25.0% |
!! | TGAAAATTATTCGTCTTTTG+TGG | + | chr4.1:46997385-46997404 | MS.gene61650:CDS | 25.0% |
AAAGTTGACAATTGATGTTG+TGG | + | chr4.1:46997545-46997564 | MS.gene61650:CDS | 30.0% | |
AACAAGTACAATTGTATGCA+TGG | - | chr4.1:46998101-46998120 | None:intergenic | 30.0% | |
AATACCAATGGTTTAGAAGA+AGG | + | chr4.1:46997360-46997379 | MS.gene61650:CDS | 30.0% | |
ATTGATACTTGAAAGCGATT+AGG | - | chr4.1:46997228-46997247 | None:intergenic | 30.0% | |
TGAGAGAAATAGAATATGCA+TGG | + | chr4.1:46997278-46997297 | MS.gene61650:CDS | 30.0% | |
TTCAAAGAAGGAAATACCAA+TGG | + | chr4.1:46997348-46997367 | MS.gene61650:CDS | 30.0% | |
TTTATCAAATGAATCCAAGG+TGG | + | chr4.1:46997125-46997144 | MS.gene61650:CDS | 30.0% | |
! | ATTCTATTGAGAGGAGATTT+TGG | - | chr4.1:46997171-46997190 | None:intergenic | 30.0% |
! | TAATCGCTTTCAAGTATCAA+TGG | + | chr4.1:46997227-46997246 | MS.gene61650:CDS | 30.0% |
!! | TCTTGACAAGTTTTTGAAGA+TGG | - | chr4.1:46997194-46997213 | None:intergenic | 30.0% |
!! | TGATACCAACAATTTTGAGA+TGG | + | chr4.1:46997500-46997519 | MS.gene61650:CDS | 30.0% |
AACTTGATTATCAACCACCT+TGG | - | chr4.1:46997142-46997161 | None:intergenic | 35.0% | |
AAGCTCAAGTTCAATGAGTT+CGG | - | chr4.1:46997742-46997761 | None:intergenic | 35.0% | |
AGAAAGCAAGAGACATACTT+AGG | + | chr4.1:46998048-46998067 | MS.gene61650:CDS | 35.0% | |
AGAATATGCATGGTTGAAGT+TGG | + | chr4.1:46997288-46997307 | MS.gene61650:CDS | 35.0% | |
ATGGAAGAGAACAATTCATG+AGG | + | chr4.1:46997829-46997848 | MS.gene61650:CDS | 35.0% | |
CAAACCTTCTTCTAAACCAT+TGG | - | chr4.1:46997367-46997386 | None:intergenic | 35.0% | |
GTCAAATACTCTGAACTTCT+TGG | - | chr4.1:46997066-46997085 | None:intergenic | 35.0% | |
TACTTGAATTGCTAGGTCAT+CGG | - | chr4.1:46997910-46997929 | None:intergenic | 35.0% | |
TGAACTTGAGCTTGAAAAAC+CGG | + | chr4.1:46997749-46997768 | MS.gene61650:CDS | 35.0% | |
TGGAGAATTATTCCAAGTAG+TGG | - | chr4.1:46998081-46998100 | None:intergenic | 35.0% | |
TGTAACAAAGGCTATGGTTA+TGG | + | chr4.1:46997311-46997330 | MS.gene61650:CDS | 35.0% | |
TTGCATTACCATGCAAAGTT+TGG | - | chr4.1:46998003-46998022 | None:intergenic | 35.0% | |
! | ATTTCATCAACTCGTTGACT+TGG | + | chr4.1:46997460-46997479 | MS.gene61650:CDS | 35.0% |
! | GATTTCGAAGAGGATTTTGA+GGG | + | chr4.1:46997872-46997891 | MS.gene61650:CDS | 35.0% |
! | GTTAGAGTACTTAGAAAGAG+AGG | + | chr4.1:46997615-46997634 | MS.gene61650:CDS | 35.0% |
! | GTTGTGGATTCAAACCTTTT+AGG | + | chr4.1:46997561-46997580 | MS.gene61650:CDS | 35.0% |
! | TGAAGATGGATTCTATTGAG+AGG | - | chr4.1:46997180-46997199 | None:intergenic | 35.0% |
! | TGATTTCGAAGAGGATTTTG+AGG | + | chr4.1:46997871-46997890 | MS.gene61650:CDS | 35.0% |
!! | CGCTGATTTAATAGCTTGTT+TGG | - | chr4.1:46997649-46997668 | None:intergenic | 35.0% |
!! | CTGAAAGTACTTGAATTGCT+AGG | - | chr4.1:46997917-46997936 | None:intergenic | 35.0% |
!! | GGTAGTGATTGATTTGTTAC+CGG | - | chr4.1:46997045-46997064 | None:intergenic | 35.0% |
!!! | GTTTTAGAGATGTTGCAAGT+TGG | + | chr4.1:46997969-46997988 | MS.gene61650:CDS | 35.0% |
!!! | TCCATGTTTTTTCCAACCAA+AGG | - | chr4.1:46997441-46997460 | None:intergenic | 35.0% |
AACATGATGAAGCCTTTGGT+TGG | + | chr4.1:46997426-46997445 | MS.gene61650:CDS | 40.0% | |
AGAGAACAATTCATGAGGCA+TGG | + | chr4.1:46997834-46997853 | MS.gene61650:CDS | 40.0% | |
AGCCAAAATTTGTGTGTGTC+CGG | + | chr4.1:46997023-46997042 | MS.gene61650:CDS | 40.0% | |
CAACAACATGATGAAGCCTT+TGG | + | chr4.1:46997422-46997441 | MS.gene61650:CDS | 40.0% | |
CTCCAAATCACACACTTCAA+AGG | + | chr4.1:46997085-46997104 | MS.gene61650:CDS | 40.0% | |
GCCTTTGGTTGGAAAAAACA+TGG | + | chr4.1:46997437-46997456 | MS.gene61650:CDS | 40.0% | |
TAGAAACCGAACAAAGATCG+TGG | + | chr4.1:46997701-46997720 | MS.gene61650:CDS | 40.0% | |
TTAGGTTACACTCCACTACT+TGG | + | chr4.1:46998066-46998085 | MS.gene61650:CDS | 40.0% | |
TTCAAAGGCTAATCAGAGCA+TGG | + | chr4.1:46997100-46997119 | MS.gene61650:CDS | 40.0% | |
TTTGTTCGGTTTCTACCCAA+CGG | - | chr4.1:46997696-46997715 | None:intergenic | 40.0% | |
! | ACTTGTTAACAAGGCACCAA+AGG | + | chr4.1:46998114-46998133 | MS.gene61650:CDS | 40.0% |
! | AGAGCTCGTGTTCAATCTTT+TGG | + | chr4.1:46997785-46997804 | MS.gene61650:CDS | 40.0% |
! | AGTTGGTGTAACAAAGGCTA+TGG | + | chr4.1:46997305-46997324 | MS.gene61650:CDS | 40.0% |
! | TACCGGACACACACAAATTT+TGG | - | chr4.1:46997028-46997047 | None:intergenic | 40.0% |
!! | AGCCTTTGAAGTGTGTGATT+TGG | - | chr4.1:46997090-46997109 | None:intergenic | 40.0% |
!! | GGTTGAAGTTGGTGTAACAA+AGG | + | chr4.1:46997299-46997318 | MS.gene61650:CDS | 40.0% |
ACAATTCATGAGGCATGGAG+CGG | + | chr4.1:46997839-46997858 | MS.gene61650:CDS | 45.0% | |
AGCGGTTTCCAAACTTTGCA+TGG | + | chr4.1:46997992-46998011 | MS.gene61650:CDS | 45.0% | |
AGCTCTGTCACATTCTTCTC+CGG | - | chr4.1:46997771-46997790 | None:intergenic | 45.0% | |
ATACCAGTCACTGTTGTCAC+AGG | - | chr4.1:46996964-46996983 | None:intergenic | 45.0% | |
GCATAGCGATGATTTCGAAG+AGG | + | chr4.1:46997862-46997881 | MS.gene61650:CDS | 45.0% | |
TTGTTCGGTTTCTACCCAAC+GGG | - | chr4.1:46997695-46997714 | None:intergenic | 45.0% | |
! | AATTGCTAGGTCATCGGTTG+TGG | - | chr4.1:46997904-46997923 | None:intergenic | 45.0% |
! | AGAGATGTTGCAAGTTGGAG+CGG | + | chr4.1:46997974-46997993 | MS.gene61650:CDS | 45.0% |
CAATTCATGAGGCATGGAGC+GGG | + | chr4.1:46997840-46997859 | MS.gene61650:CDS | 50.0% | |
CCGAACAAAGATCGTGGAAG+CGG | + | chr4.1:46997707-46997726 | MS.gene61650:CDS | 50.0% | |
CCGCTTCCACGATCTTTGTT+CGG | - | chr4.1:46997710-46997729 | None:intergenic | 50.0% | |
CGAACAAAGATCGTGGAAGC+GGG | + | chr4.1:46997708-46997727 | MS.gene61650:CDS | 50.0% | |
CTTATAGAGACGTGCCCGTT+GGG | + | chr4.1:46997678-46997697 | MS.gene61650:CDS | 50.0% | |
GAACCTGTGACAACAGTGAC+TGG | + | chr4.1:46996958-46996977 | MS.gene61650:CDS | 50.0% | |
ACAAAGATCGTGGAAGCGGG+TGG | + | chr4.1:46997711-46997730 | MS.gene61650:CDS | 55.0% | |
CATTTGTGTTCGTGCGCGGA+TGG | + | chr4.1:46997810-46997829 | MS.gene61650:CDS | 55.0% | |
GCTTATAGAGACGTGCCCGT+TGG | + | chr4.1:46997677-46997696 | MS.gene61650:CDS | 55.0% | |
GGCACATTTGTGTTCGTGCG+CGG | + | chr4.1:46997806-46997825 | MS.gene61650:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 46996952 | 46998139 | 46996952 | ID=MS.gene61650 |
chr4.1 | mRNA | 46996952 | 46998139 | 46996952 | ID=MS.gene61650.t1;Parent=MS.gene61650 |
chr4.1 | exon | 46996952 | 46998139 | 46996952 | ID=MS.gene61650.t1.exon1;Parent=MS.gene61650.t1 |
chr4.1 | CDS | 46996952 | 46998139 | 46996952 | ID=cds.MS.gene61650.t1;Parent=MS.gene61650.t1 |
Gene Sequence |
Protein sequence |