Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61749.t1 | XP_003606828.2 | 91.2 | 400 | 33 | 1 | 1 | 398 | 1 | 400 | 3.80E-204 | 720.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61749.t1 | Q95LL3 | 52.5 | 265 | 123 | 1 | 128 | 392 | 182 | 443 | 3.4e-76 | 287.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61749.t1 | G7JEW7 | 91.2 | 400 | 33 | 1 | 1 | 398 | 1 | 400 | 2.8e-204 | 720.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene61749 | MS.gene40923 | PPI |
| MS.gene61749 | MS.gene049260 | PPI |
| MS.gene61749 | MS.gene06367 | PPI |
| MS.gene61749 | MS.gene013282 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61749.t1 | MTR_4g068180 | 94.000 | 400 | 22 | 1 | 1 | 398 | 1 | 400 | 0.0 | 758 |
| MS.gene61749.t1 | MTR_2g099380 | 76.364 | 385 | 89 | 1 | 14 | 398 | 11 | 393 | 0.0 | 617 |
| MS.gene61749.t1 | MTR_2g099380 | 76.235 | 324 | 75 | 1 | 14 | 337 | 11 | 332 | 0.0 | 508 |
| MS.gene61749.t1 | MTR_3g083840 | 27.393 | 303 | 151 | 9 | 139 | 385 | 88 | 377 | 6.56e-22 | 97.4 |
| MS.gene61749.t1 | MTR_4g114580 | 25.753 | 365 | 189 | 9 | 85 | 393 | 75 | 413 | 3.43e-21 | 95.5 |
| MS.gene61749.t1 | MTR_8g085300 | 26.829 | 328 | 171 | 8 | 114 | 385 | 74 | 388 | 1.39e-20 | 93.6 |
| MS.gene61749.t1 | MTR_1g069705 | 27.740 | 292 | 146 | 12 | 121 | 377 | 46 | 307 | 4.59e-19 | 89.0 |
| MS.gene61749.t1 | MTR_6g016590 | 26.255 | 259 | 141 | 6 | 156 | 407 | 87 | 302 | 5.20e-16 | 79.3 |
| MS.gene61749.t1 | MTR_4g115090 | 26.316 | 247 | 148 | 7 | 141 | 378 | 350 | 571 | 6.36e-16 | 80.1 |
| MS.gene61749.t1 | MTR_2g099185 | 27.219 | 169 | 99 | 2 | 214 | 381 | 372 | 517 | 9.89e-15 | 76.3 |
| MS.gene61749.t1 | MTR_2g099185 | 27.219 | 169 | 99 | 2 | 214 | 381 | 367 | 512 | 1.47e-14 | 75.9 |
| MS.gene61749.t1 | MTR_5g098140 | 25.523 | 239 | 134 | 6 | 149 | 383 | 106 | 304 | 1.55e-14 | 75.1 |
| MS.gene61749.t1 | MTR_2g099185 | 27.219 | 169 | 99 | 2 | 214 | 381 | 367 | 512 | 1.60e-14 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61749.t1 | AT2G30710 | 71.505 | 372 | 101 | 3 | 21 | 392 | 13 | 379 | 0.0 | 562 |
| MS.gene61749.t1 | AT1G04830 | 27.545 | 334 | 171 | 10 | 110 | 385 | 72 | 392 | 6.24e-25 | 106 |
| MS.gene61749.t1 | AT1G04830 | 27.545 | 334 | 171 | 10 | 110 | 385 | 72 | 392 | 7.60e-25 | 106 |
| MS.gene61749.t1 | AT4G13730 | 25.413 | 303 | 168 | 6 | 128 | 385 | 96 | 385 | 3.35e-20 | 92.4 |
| MS.gene61749.t1 | AT4G13730 | 24.540 | 326 | 177 | 7 | 128 | 397 | 96 | 408 | 1.26e-18 | 87.4 |
| MS.gene61749.t1 | AT3G02460 | 25.969 | 258 | 140 | 7 | 156 | 406 | 88 | 301 | 3.65e-18 | 85.5 |
| MS.gene61749.t1 | AT4G13730 | 24.688 | 320 | 172 | 7 | 128 | 391 | 96 | 402 | 3.95e-18 | 86.3 |
| MS.gene61749.t1 | AT3G02460 | 26.383 | 235 | 123 | 6 | 156 | 383 | 88 | 279 | 2.83e-17 | 82.4 |
| MS.gene61749.t1 | AT3G02460 | 26.383 | 235 | 123 | 6 | 156 | 383 | 88 | 279 | 4.61e-17 | 82.4 |
| MS.gene61749.t1 | AT3G02460 | 26.383 | 235 | 123 | 6 | 156 | 383 | 88 | 279 | 5.68e-17 | 82.0 |
| MS.gene61749.t1 | AT3G02460 | 26.068 | 234 | 123 | 6 | 156 | 382 | 88 | 278 | 1.35e-16 | 80.1 |
| MS.gene61749.t1 | AT3G07890 | 26.360 | 239 | 132 | 5 | 149 | 383 | 109 | 307 | 3.28e-16 | 80.1 |
| MS.gene61749.t1 | AT3G07890 | 26.360 | 239 | 132 | 5 | 149 | 383 | 109 | 307 | 3.28e-16 | 80.1 |
| MS.gene61749.t1 | AT3G07890 | 26.360 | 239 | 132 | 5 | 149 | 383 | 109 | 307 | 3.28e-16 | 80.1 |
| MS.gene61749.t1 | AT3G07890 | 26.360 | 239 | 132 | 5 | 149 | 383 | 109 | 307 | 3.28e-16 | 80.1 |
| MS.gene61749.t1 | AT3G07890 | 26.360 | 239 | 132 | 5 | 149 | 383 | 109 | 307 | 3.28e-16 | 80.1 |
| MS.gene61749.t1 | AT5G15930 | 25.532 | 235 | 125 | 6 | 156 | 383 | 85 | 276 | 2.29e-15 | 77.4 |
| MS.gene61749.t1 | AT2G43490 | 27.811 | 169 | 98 | 2 | 214 | 381 | 359 | 504 | 1.59e-14 | 75.9 |
| MS.gene61749.t1 | AT2G43490 | 27.811 | 169 | 98 | 2 | 214 | 381 | 355 | 500 | 1.68e-14 | 75.9 |
| MS.gene61749.t1 | AT2G43490 | 27.811 | 169 | 98 | 2 | 214 | 381 | 355 | 500 | 1.68e-14 | 75.9 |
| MS.gene61749.t1 | AT2G43490 | 27.811 | 169 | 98 | 2 | 214 | 381 | 359 | 504 | 1.76e-14 | 75.9 |
| MS.gene61749.t1 | AT2G43490 | 27.811 | 169 | 98 | 2 | 214 | 381 | 359 | 504 | 1.79e-14 | 75.9 |
| MS.gene61749.t1 | AT2G43490 | 27.811 | 169 | 98 | 2 | 214 | 381 | 359 | 504 | 1.79e-14 | 75.9 |
| MS.gene61749.t1 | AT2G43490 | 27.811 | 169 | 98 | 2 | 214 | 381 | 359 | 504 | 1.79e-14 | 75.9 |
| MS.gene61749.t1 | AT2G43490 | 27.811 | 169 | 98 | 2 | 214 | 381 | 359 | 504 | 1.79e-14 | 75.9 |
| MS.gene61749.t1 | AT3G59570 | 27.219 | 169 | 99 | 2 | 214 | 381 | 363 | 508 | 1.23e-13 | 73.2 |
| MS.gene61749.t1 | AT3G59570 | 27.219 | 169 | 99 | 2 | 214 | 381 | 363 | 508 | 1.58e-13 | 72.8 |
| MS.gene61749.t1 | AT3G59570 | 27.219 | 169 | 99 | 2 | 214 | 381 | 363 | 508 | 1.61e-13 | 72.8 |
| MS.gene61749.t1 | AT2G37290 | 25.483 | 259 | 150 | 8 | 147 | 400 | 308 | 528 | 1.93e-13 | 72.8 |
| MS.gene61749.t1 | AT2G37290 | 24.710 | 259 | 152 | 7 | 147 | 400 | 308 | 528 | 2.13e-13 | 72.8 |
| MS.gene61749.t1 | AT5G52580 | 25.692 | 253 | 154 | 8 | 141 | 382 | 364 | 593 | 6.58e-13 | 70.9 |
| MS.gene61749.t1 | AT4G28550 | 27.326 | 172 | 98 | 5 | 213 | 381 | 166 | 313 | 7.30e-13 | 69.7 |
| MS.gene61749.t1 | AT5G52580 | 25.692 | 253 | 154 | 8 | 141 | 382 | 358 | 587 | 7.41e-13 | 70.9 |
| MS.gene61749.t1 | AT5G52580 | 25.692 | 253 | 154 | 8 | 141 | 382 | 375 | 604 | 7.52e-13 | 70.9 |
| MS.gene61749.t1 | AT2G20440 | 25.091 | 275 | 140 | 9 | 149 | 381 | 63 | 313 | 1.01e-12 | 69.7 |
| MS.gene61749.t1 | AT2G20440 | 25.091 | 275 | 140 | 9 | 149 | 381 | 63 | 313 | 1.01e-12 | 69.7 |
| MS.gene61749.t1 | AT4G28550 | 27.907 | 172 | 97 | 5 | 213 | 381 | 166 | 313 | 1.21e-12 | 69.7 |
| MS.gene61749.t1 | AT2G20440 | 27.485 | 171 | 97 | 5 | 214 | 381 | 51 | 197 | 2.16e-12 | 67.8 |
| MS.gene61749.t1 | AT4G28550 | 27.811 | 169 | 95 | 5 | 213 | 378 | 166 | 310 | 5.27e-12 | 67.0 |
| MS.gene61749.t1 | AT2G20440 | 24.739 | 287 | 143 | 10 | 149 | 393 | 63 | 318 | 6.17e-12 | 67.0 |
Find 90 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCTTCAATTTGCTTTC+CGG | 0.153454 | 8.4:+58658360 | MS.gene61749:CDS |
| AAGTTCAATAAGGTGCTTTC+TGG | 0.158641 | 8.4:+58655571 | MS.gene61749:CDS |
| CTCTCCTTTCTATCTGAATT+AGG | 0.242174 | 8.4:-58656667 | None:intergenic |
| TCGATCTCATCACACGTCTT+TGG | 0.255792 | 8.4:+58658835 | MS.gene61749:CDS |
| CGATCTCATCACACGTCTTT+GGG | 0.274335 | 8.4:+58658836 | MS.gene61749:CDS |
| TCTGGAACAGTGGTTATATT+AGG | 0.280287 | 8.4:+58655589 | MS.gene61749:CDS |
| TCGTAGGGTTTGGCTGAATC+TGG | 0.319413 | 8.4:-58654380 | None:intergenic |
| AAGAGGAGTCTCCACACTTT+AGG | 0.321748 | 8.4:-58656248 | None:intergenic |
| CCCTGAACATATCCACTTGC+AGG | 0.326350 | 8.4:-58657502 | None:intergenic |
| AAAACAAGCCTCTGAATTCC+AGG | 0.327397 | 8.4:-58657706 | None:intergenic |
| TTTATATCAGAACACTTAGA+AGG | 0.337221 | 8.4:+58657559 | MS.gene61749:CDS |
| TCGTCTGAACGTTCTGAATC+AGG | 0.346925 | 8.4:-58656748 | None:intergenic |
| ATTTCTGAACTTGTTGTTGC+TGG | 0.351405 | 8.4:-58656924 | None:intergenic |
| CTTGAACGTTTCGTAGGGTT+TGG | 0.364219 | 8.4:-58654390 | None:intergenic |
| TCCTCTATATGTTGTGAAAC+AGG | 0.369650 | 8.4:-58658326 | None:intergenic |
| TCTGCTCATCAATACTTTAC+CGG | 0.374779 | 8.4:-58655197 | None:intergenic |
| TCCTGCAAGTGGATATGTTC+AGG | 0.375547 | 8.4:+58657501 | MS.gene61749:CDS |
| GGTATACTTGCGGGTGTCTT+CGG | 0.387375 | 8.4:-58655512 | None:intergenic |
| AGATAGAAAGGAGAGAGTTC+TGG | 0.392681 | 8.4:+58656675 | MS.gene61749:CDS |
| AGAGGAGTCTCCACACTTTA+GGG | 0.401637 | 8.4:-58656247 | None:intergenic |
| ACTTTAGGGCGCATATAATC+TGG | 0.407268 | 8.4:-58656233 | None:intergenic |
| AATATATACATAAGGAAGTC+TGG | 0.416119 | 8.4:-58658888 | None:intergenic |
| GAATTGGTCAGGAGGATAGA+TGG | 0.417574 | 8.4:+58657739 | MS.gene61749:CDS |
| GTAACGTCAGGTACAGTTCT+TGG | 0.418419 | 8.4:-58656895 | None:intergenic |
| TTAAATTGAAGGAATTGGTC+AGG | 0.419755 | 8.4:+58657728 | MS.gene61749:CDS |
| GATAGAAAGGAGAGAGTTCT+GGG | 0.421379 | 8.4:+58656676 | MS.gene61749:CDS |
| AAGAGTTACAAAGTTCAATA+AGG | 0.425239 | 8.4:+58655561 | MS.gene61749:CDS |
| TGCGAACAAAACTAGAAATC+AGG | 0.431020 | 8.4:-58659079 | None:intergenic |
| TTCACAACATATAGAGGATC+AGG | 0.434173 | 8.4:+58658331 | MS.gene61749:CDS |
| AGCACCAATGGTATACTTGC+GGG | 0.441629 | 8.4:-58655521 | None:intergenic |
| GATTGTGTCTGAAGATAAAT+CGG | 0.457816 | 8.4:-58657605 | None:intergenic |
| ACAAATTGCGTGAATTAACT+TGG | 0.474120 | 8.4:+58656201 | MS.gene61749:CDS |
| TATCCTCAACATTCTACAAA+AGG | 0.477199 | 8.4:+58655254 | MS.gene61749:CDS |
| TGGTGCTAGAGCTACGGATT+CGG | 0.480299 | 8.4:+58655537 | MS.gene61749:CDS |
| ACAACAAGTTCAGAAATCAT+TGG | 0.485486 | 8.4:+58656930 | MS.gene61749:CDS |
| GCCTGTTTCACAACATATAG+AGG | 0.486010 | 8.4:+58658325 | MS.gene61749:CDS |
| GGCACAAGTGATCAGATATC+TGG | 0.493498 | 8.4:+58655298 | MS.gene61749:CDS |
| ATGTAGAGGCTGACTGCTAC+TGG | 0.498246 | 8.4:+58657632 | MS.gene61749:CDS |
| CTGCTCATCAATACTTTACC+GGG | 0.500375 | 8.4:-58655196 | None:intergenic |
| CATTACACATTTGCTCAACC+TGG | 0.502850 | 8.4:+58657688 | MS.gene61749:CDS |
| ACCACCTAATTCAGATAGAA+AGG | 0.505337 | 8.4:+58656663 | MS.gene61749:CDS |
| CAAACCCTACGAAACGTTCA+AGG | 0.508875 | 8.4:+58654391 | MS.gene61749:CDS |
| TAAGGTGCTTTCTGGAACAG+TGG | 0.515552 | 8.4:+58655579 | MS.gene61749:CDS |
| GAAAGGAGAGAGTTCTGGGA+AGG | 0.516729 | 8.4:+58656680 | MS.gene61749:CDS |
| CCTGCAAGTGGATATGTTCA+GGG | 0.519081 | 8.4:+58657502 | MS.gene61749:CDS |
| CTCAAAGGTCGTAGCATGCC+CGG | 0.521571 | 8.4:+58655178 | MS.gene61749:CDS |
| TTATATCAGAACACTTAGAA+GGG | 0.537210 | 8.4:+58657560 | MS.gene61749:CDS |
| TGTTTGTCAAAGTTGCTTGA+CGG | 0.537947 | 8.4:+58657655 | MS.gene61749:CDS |
| TCCTTTCTATCTGAATTAGG+TGG | 0.539605 | 8.4:-58656664 | None:intergenic |
| TTTGAGTTCAAGTTATCAGA+AGG | 0.541216 | 8.4:-58655229 | None:intergenic |
| CATTATCAGCCGGTATGTAT+CGG | 0.546164 | 8.4:-58659051 | None:intergenic |
| TGAGGTCAACATGCTTCGCC+AGG | 0.546292 | 8.4:+58656771 | MS.gene61749:CDS |
| TAAAGTGTGGAGACTCCTCT+TGG | 0.555773 | 8.4:+58656250 | MS.gene61749:CDS |
| TTCTTCAATTTGCTTTCCGG+TGG | 0.556488 | 8.4:+58658363 | MS.gene61749:CDS |
| TTACCTCTTCCGATACATAC+CGG | 0.557899 | 8.4:+58659042 | MS.gene61749:CDS |
| CAGGTTGAGCAAATGTGTAA+TGG | 0.558220 | 8.4:-58657687 | None:intergenic |
| TGCTGGAAGAATGTAACGTC+AGG | 0.558963 | 8.4:-58656907 | None:intergenic |
| TACCATTGGTGCTAGAGCTA+CGG | 0.560252 | 8.4:+58655531 | MS.gene61749:CDS |
| ATCCGTAGCTCTAGCACCAA+TGG | 0.561365 | 8.4:-58655533 | None:intergenic |
| TTACCCTTGAACGTTTCGTA+GGG | 0.565324 | 8.4:-58654395 | None:intergenic |
| ATTACCCTTGAACGTTTCGT+AGG | 0.569950 | 8.4:-58654396 | None:intergenic |
| TCAGATATCTGGTGCAGTAG+AGG | 0.573878 | 8.4:+58655309 | MS.gene61749:CDS |
| CAGCCGGTATGTATCGGAAG+AGG | 0.577226 | 8.4:-58659045 | None:intergenic |
| AGTTTCTCACACAATGATGC+TGG | 0.578928 | 8.4:+58655277 | MS.gene61749:CDS |
| TGGGACACATATCTTGCTGA+AGG | 0.579667 | 8.4:+58658855 | MS.gene61749:CDS |
| TTTAAATCAAGGTTGCTCAA+AGG | 0.582230 | 8.4:+58655163 | MS.gene61749:intron |
| TACAGTTCTTGGACAATCAA+CGG | 0.584447 | 8.4:-58656884 | None:intergenic |
| GCCATTCGACATCCTGCAAG+TGG | 0.586594 | 8.4:+58657490 | MS.gene61749:CDS |
| TGGAACGTATTCTTTATGCA+TGG | 0.587229 | 8.4:+58656950 | MS.gene61749:CDS |
| TTCTGATAACTTGAACTCAA+AGG | 0.587378 | 8.4:+58655231 | MS.gene61749:CDS |
| TTGCTCAACCTGGAATTCAG+AGG | 0.589516 | 8.4:+58657698 | MS.gene61749:CDS |
| TAGCACCAATGGTATACTTG+CGG | 0.590627 | 8.4:-58655522 | None:intergenic |
| GACACCCGCAAGTATACCAT+TGG | 0.592336 | 8.4:+58655517 | MS.gene61749:CDS |
| AGAGTTCTGGGAAGGAAGCG+CGG | 0.598217 | 8.4:+58656688 | MS.gene61749:CDS |
| TCCACTTGCAGGATGTCGAA+TGG | 0.599779 | 8.4:-58657491 | None:intergenic |
| TCAGGCTCAACATTATCAGC+CGG | 0.600770 | 8.4:-58659061 | None:intergenic |
| TCAAAAGACAGTTGAACCAC+CGG | 0.600802 | 8.4:-58658379 | None:intergenic |
| GTAAAGTATTGATGAGCAGA+AGG | 0.604241 | 8.4:+58655200 | MS.gene61749:CDS |
| ATTATATGCGCCCTAAAGTG+TGG | 0.607591 | 8.4:+58656237 | MS.gene61749:CDS |
| AATTGAAGGAATTGGTCAGG+AGG | 0.609370 | 8.4:+58657731 | MS.gene61749:CDS |
| TATATCAGAACACTTAGAAG+GGG | 0.625153 | 8.4:+58657561 | MS.gene61749:CDS |
| AGACGTGTGATGAGATCGAA+AGG | 0.630523 | 8.4:-58658831 | None:intergenic |
| AGACACAATCTCTAATGTAG+AGG | 0.632944 | 8.4:+58657618 | MS.gene61749:CDS |
| ATACATAAGGAAGTCTGGCA+AGG | 0.634313 | 8.4:-58658883 | None:intergenic |
| ATATCAGAACACTTAGAAGG+GGG | 0.643161 | 8.4:+58657562 | MS.gene61749:CDS |
| TCACAACATATAGAGGATCA+GGG | 0.651098 | 8.4:+58658332 | MS.gene61749:CDS |
| TTGCGTGAATTAACTTGGAG+TGG | 0.652943 | 8.4:+58656206 | MS.gene61749:CDS |
| CTGCAAGTGGATATGTTCAG+GGG | 0.657901 | 8.4:+58657503 | MS.gene61749:CDS |
| AAACCCTACGAAACGTTCAA+GGG | 0.660853 | 8.4:+58654392 | MS.gene61749:CDS |
| TTCAGAACGTTCAGACGATG+AGG | 0.666129 | 8.4:+58656753 | MS.gene61749:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTCAATTAAAATAATTATA+TGG | - | chr8.4:58658653-58658672 | None:intergenic | 10.0% |
| !!! | AACATATACAAAATTAATTT+TGG | + | chr8.4:58658617-58658636 | MS.gene61749:intron | 10.0% |
| !!! | AATATATTATTTTAGTGAAA+AGG | - | chr8.4:58658952-58658971 | None:intergenic | 10.0% |
| !!! | ATTTATTTCTCTATTTAATT+TGG | + | chr8.4:58655797-58655816 | MS.gene61749:intron | 10.0% |
| !! | AAGATATACGAATAATAATA+CGG | - | chr8.4:58658252-58658271 | None:intergenic | 15.0% |
| !! | ACTATTTAAAAATAACAAAG+AGG | - | chr8.4:58658069-58658088 | None:intergenic | 15.0% |
| !! | ATAACTAATTTCAACTTATA+CGG | - | chr8.4:58658554-58658573 | None:intergenic | 15.0% |
| !! | GATATAAAAACAACTAAAAA+CGG | - | chr8.4:58657547-58657566 | None:intergenic | 15.0% |
| !! | GTTATATAGAAAATCATTAA+GGG | + | chr8.4:58656550-58656569 | MS.gene61749:intron | 15.0% |
| !! | TGTTATATAGAAAATCATTA+AGG | + | chr8.4:58656549-58656568 | MS.gene61749:intron | 15.0% |
| !! | TTATATAGAAAATCATTAAG+GGG | + | chr8.4:58656551-58656570 | MS.gene61749:intron | 15.0% |
| !!! | AAAAAGTTTTAGATAAAAGA+GGG | - | chr8.4:58655924-58655943 | None:intergenic | 15.0% |
| !!! | AATTTTTCAATTTTTTTGTC+AGG | + | chr8.4:58657467-58657486 | MS.gene61749:intron | 15.0% |
| !!! | ATATACAAAATTAATTTTGG+AGG | + | chr8.4:58658620-58658639 | MS.gene61749:intron | 15.0% |
| !!! | ATTAGTTTTTAACTTAACAA+AGG | - | chr8.4:58658678-58658697 | None:intergenic | 15.0% |
| !!! | ATTTTTCAATTTTTTTGTCA+GGG | + | chr8.4:58657468-58657487 | MS.gene61749:intron | 15.0% |
| !!! | TAAAAAGTTTTAGATAAAAG+AGG | - | chr8.4:58655925-58655944 | None:intergenic | 15.0% |
| !!! | TGAAGAGTTAAAAATTATTT+TGG | - | chr8.4:58655008-58655027 | None:intergenic | 15.0% |
| !! | AAGGTAAAATGATTAATGTT+TGG | + | chr8.4:58654864-58654883 | MS.gene61749:intron | 20.0% |
| !! | AATGAATGAATCTAATAAAG+AGG | - | chr8.4:58654552-58654571 | None:intergenic | 20.0% |
| !! | AATTATGTATCTTTAACCAA+TGG | - | chr8.4:58658189-58658208 | None:intergenic | 20.0% |
| !! | ACAAAATGTTATCTATAAGA+AGG | - | chr8.4:58656602-58656621 | None:intergenic | 20.0% |
| !! | ATGAATGAATCTAATAAAGA+GGG | - | chr8.4:58654551-58654570 | None:intergenic | 20.0% |
| !! | CAGTTTATCTTTAAATTTCA+AGG | - | chr8.4:58656628-58656647 | None:intergenic | 20.0% |
| !! | GAATTGAAATATAAGAATGA+TGG | - | chr8.4:58654456-58654475 | None:intergenic | 20.0% |
| !! | TAAACATATTCAATTCACTT+TGG | - | chr8.4:58654901-58654920 | None:intergenic | 20.0% |
| !! | TAAATTGTGATTGTTATGAT+GGG | - | chr8.4:58655880-58655899 | None:intergenic | 20.0% |
| !! | TCAAATTAACCTACTTATAA+AGG | - | chr8.4:58658433-58658452 | None:intergenic | 20.0% |
| !! | TTAAATTGTGATTGTTATGA+TGG | - | chr8.4:58655881-58655900 | None:intergenic | 20.0% |
| !! | TTATAAAGGAAAAGATTGTT+AGG | - | chr8.4:58658419-58658438 | None:intergenic | 20.0% |
| !! | TTTATGTTCTCTTTAAATCA+AGG | + | chr8.4:58655152-58655171 | MS.gene61749:intron | 20.0% |
| !!! | AAATTATTTTGGTATGTTTG+CGG | - | chr8.4:58654997-58655016 | None:intergenic | 20.0% |
| !!! | AGTATCTCAAATTATTTCTA+AGG | + | chr8.4:58655744-58655763 | MS.gene61749:intron | 20.0% |
| !!! | ATAAGTTGAAATTAGTTATG+CGG | + | chr8.4:58658555-58658574 | MS.gene61749:intron | 20.0% |
| !!! | ATTGATTTATGCTCTTATTA+AGG | + | chr8.4:58658782-58658801 | MS.gene61749:intron | 20.0% |
| !!! | TGTAGTTTAAAACAAGTTTA+AGG | + | chr8.4:58654845-58654864 | MS.gene61749:intron | 20.0% |
| !!! | TGTTTTTAAATTGAAGGAAT+TGG | + | chr8.4:58657723-58657742 | MS.gene61749:CDS | 20.0% |
| !!! | TTCAATTTTCCTATGTATTT+GGG | + | chr8.4:58655628-58655647 | MS.gene61749:intron | 20.0% |
| !!! | TTCTCTATTTAATTTGGATT+TGG | + | chr8.4:58655803-58655822 | MS.gene61749:intron | 20.0% |
| ! | AAATCAAACCATTTCAAGAA+TGG | - | chr8.4:58657438-58657457 | None:intergenic | 25.0% |
| ! | AACTGGCAAATATATACATA+AGG | - | chr8.4:58658899-58658918 | None:intergenic | 25.0% |
| ! | AAGAGTTACAAAGTTCAATA+AGG | + | chr8.4:58655561-58655580 | MS.gene61749:CDS | 25.0% |
| ! | AATATATACATAAGGAAGTC+TGG | - | chr8.4:58658891-58658910 | None:intergenic | 25.0% |
| ! | ACTTGATATGTATCAATTAC+TGG | + | chr8.4:58657153-58657172 | MS.gene61749:intron | 25.0% |
| ! | ATAATCAGATATGGTCATTA+AGG | - | chr8.4:58655677-58655696 | None:intergenic | 25.0% |
| ! | ATATGTACCAGTTTACTTAA+AGG | - | chr8.4:58657341-58657360 | None:intergenic | 25.0% |
| ! | ATCACTAGACTAAGAATATT+GGG | - | chr8.4:58657004-58657023 | None:intergenic | 25.0% |
| ! | ATGATAATAAGGAATTGTTG+AGG | + | chr8.4:58656347-58656366 | MS.gene61749:intron | 25.0% |
| ! | ATTCAATTGTAAACTGTGTA+TGG | + | chr8.4:58657363-58657382 | MS.gene61749:intron | 25.0% |
| ! | GCAAAAATAGGTTTCAATAA+GGG | - | chr8.4:58656131-58656150 | None:intergenic | 25.0% |
| ! | TACAATTCCTAACTTTAAGT+TGG | + | chr8.4:58654932-58654951 | MS.gene61749:intron | 25.0% |
| ! | TATATCTCCTTTAAGTAAAC+TGG | + | chr8.4:58657331-58657350 | MS.gene61749:intron | 25.0% |
| ! | TCAACTAGATAGATTTCTTA+AGG | - | chr8.4:58654746-58654765 | None:intergenic | 25.0% |
| ! | TCATATGAAGCATGATAATA+AGG | + | chr8.4:58656336-58656355 | MS.gene61749:intron | 25.0% |
| ! | TGAAAACTTGAGAATAGAAA+TGG | - | chr8.4:58657856-58657875 | None:intergenic | 25.0% |
| ! | TTAAAGATAAACTGACAACA+GGG | + | chr8.4:58656634-58656653 | MS.gene61749:intron | 25.0% |
| ! | TTATATCAGAACACTTAGAA+GGG | + | chr8.4:58657560-58657579 | MS.gene61749:CDS | 25.0% |
| ! | TTTAAAGATAAACTGACAAC+AGG | + | chr8.4:58656633-58656652 | MS.gene61749:intron | 25.0% |
| ! | TTTATATCAGAACACTTAGA+AGG | + | chr8.4:58657559-58657578 | MS.gene61749:CDS | 25.0% |
| !! | AAGGATGAAATATTTTACAC+TGG | - | chr8.4:58656157-58656176 | None:intergenic | 25.0% |
| !! | AATTTCTTCAATTTGCTTTC+CGG | + | chr8.4:58658360-58658379 | MS.gene61749:CDS | 25.0% |
| !! | ATGAAATATTTTACACTGGT+AGG | - | chr8.4:58656153-58656172 | None:intergenic | 25.0% |
| !! | ATGTTTCTATAAGTTTGATG+TGG | + | chr8.4:58655366-58655385 | MS.gene61749:intron | 25.0% |
| !! | CAATCTTTTCCTTTATAAGT+AGG | + | chr8.4:58658421-58658440 | MS.gene61749:intron | 25.0% |
| !! | CTTCAATTTTCCTATGTATT+TGG | + | chr8.4:58655627-58655646 | MS.gene61749:intron | 25.0% |
| !! | GAAATATAAGAATGATGGAA+TGG | - | chr8.4:58654451-58654470 | None:intergenic | 25.0% |
| !! | TAAGGCAAAATCTCAATTTT+GGG | - | chr8.4:58654728-58654747 | None:intergenic | 25.0% |
| !! | TATCTATAAGAAGGTATGAT+GGG | - | chr8.4:58656593-58656612 | None:intergenic | 25.0% |
| !! | TCATCATCTTATTTATCCAT+TGG | + | chr8.4:58658170-58658189 | MS.gene61749:intron | 25.0% |
| !! | TGATTGGTTAAAATTCACAT+GGG | - | chr8.4:58657965-58657946 | None:intergenic | 25.0% |
| !! | TTAAGGCAAAATCTCAATTT+TGG | - | chr8.4:58654729-58654748 | None:intergenic | 25.0% |
| !! | TTATCTATAAGAAGGTATGA+TGG | - | chr8.4:58656594-58656613 | None:intergenic | 25.0% |
| !! | TTGATTGGTTAAAATTCACA+TGG | - | chr8.4:58657964-58657945 | None:intergenic | 25.0% |
| !!! | CATAAAAGTTTTGTTCATTG+AGG | + | chr8.4:58656423-58656442 | MS.gene61749:intron | 25.0% |
| !!! | TCAAATTGATTCGCATAATT+AGG | + | chr8.4:58654514-58654533 | MS.gene61749:intron | 25.0% |
| AAGTTAGGAATTGTAGTTTG+TGG | - | chr8.4:58654927-58654946 | None:intergenic | 30.0% | |
| ACAAATTGCGTGAATTAACT+TGG | + | chr8.4:58656201-58656220 | MS.gene61749:CDS | 30.0% | |
| ACAACAAGTTCAGAAATCAT+TGG | + | chr8.4:58656930-58656949 | MS.gene61749:CDS | 30.0% | |
| ACTTCTATTCTTAATACAGG+AGG | + | chr8.4:58655408-58655427 | MS.gene61749:intron | 30.0% | |
| AGAATATTGGGACTAAGAAA+TGG | - | chr8.4:58656992-58657011 | None:intergenic | 30.0% | |
| ATACTAACATACCCTAATAC+TGG | - | chr8.4:58657104-58657123 | None:intergenic | 30.0% | |
| ATGGTACTAAATGATACTCT+TGG | + | chr8.4:58657382-58657401 | MS.gene61749:intron | 30.0% | |
| ATGGTATGAAATCCATAAAC+AGG | - | chr8.4:58657837-58657856 | None:intergenic | 30.0% | |
| CAAAAACTATCAATAGGCTA+AGG | - | chr8.4:58656010-58656029 | None:intergenic | 30.0% | |
| CACATATTCCATTCTTGAAA+TGG | + | chr8.4:58657427-58657446 | MS.gene61749:intron | 30.0% | |
| CTTGTTGCAAAACATTTATG+TGG | - | chr8.4:58656492-58656511 | None:intergenic | 30.0% | |
| GAATATTGGGACTAAGAAAT+GGG | - | chr8.4:58656991-58657010 | None:intergenic | 30.0% | |
| GAGACTTCTATTCTTAATAC+AGG | + | chr8.4:58655405-58655424 | MS.gene61749:intron | 30.0% | |
| GATCACTAGACTAAGAATAT+TGG | - | chr8.4:58657005-58657024 | None:intergenic | 30.0% | |
| GATTGTGTCTGAAGATAAAT+CGG | - | chr8.4:58657608-58657627 | None:intergenic | 30.0% | |
| GGCAAAAATAGGTTTCAATA+AGG | - | chr8.4:58656132-58656151 | None:intergenic | 30.0% | |
| GTGACCCATCAAATTTATAT+GGG | + | chr8.4:58657966-58657985 | MS.gene61749:intron | 30.0% | |
| TAAGAATAGAAGTCTCTTCT+AGG | - | chr8.4:58655401-58655420 | None:intergenic | 30.0% | |
| TACTAACATACCCTAATACT+GGG | - | chr8.4:58657103-58657122 | None:intergenic | 30.0% | |
| TACTGGTATGACAATAATTC+AGG | + | chr8.4:58657170-58657189 | MS.gene61749:intron | 30.0% | |
| TACTGTACTTAATCTAGTAC+TGG | + | chr8.4:58657254-58657273 | MS.gene61749:intron | 30.0% | |
| TATATCAGAACACTTAGAAG+GGG | + | chr8.4:58657561-58657580 | MS.gene61749:CDS | 30.0% | |
| TATCCTCAACATTCTACAAA+AGG | + | chr8.4:58655254-58655273 | MS.gene61749:CDS | 30.0% | |
| TGCGAATCAATTTGAATATG+TGG | - | chr8.4:58654509-58654528 | None:intergenic | 30.0% | |
| TGTGACCCATCAAATTTATA+TGG | + | chr8.4:58657965-58657984 | MS.gene61749:intron | 30.0% | |
| TTAAATTGAAGGAATTGGTC+AGG | + | chr8.4:58657728-58657747 | MS.gene61749:CDS | 30.0% | |
| TTCTGATAACTTGAACTCAA+AGG | + | chr8.4:58655231-58655250 | MS.gene61749:CDS | 30.0% | |
| TTTAAATCAAGGTTGCTCAA+AGG | + | chr8.4:58655163-58655182 | MS.gene61749:intron | 30.0% | |
| ! | AAAGTGTCTGAATGGTAAAA+TGG | + | chr8.4:58658743-58658762 | MS.gene61749:intron | 30.0% |
| ! | ACTGATTCCAACTTAAAGTT+AGG | - | chr8.4:58654942-58654961 | None:intergenic | 30.0% |
| ! | CTGTCATGGATAATTTTCTT+AGG | + | chr8.4:58657026-58657045 | MS.gene61749:intron | 30.0% |
| ! | GTTTTGCAACAAGATTATGA+GGG | + | chr8.4:58656499-58656518 | MS.gene61749:intron | 30.0% |
| ! | TAGGTTAATTTGAGTCAGAT+TGG | + | chr8.4:58658440-58658459 | MS.gene61749:intron | 30.0% |
| ! | TCAATGATAAAGTGTCTGAA+TGG | + | chr8.4:58658735-58658754 | MS.gene61749:intron | 30.0% |
| ! | TGTTTTGCAACAAGATTATG+AGG | + | chr8.4:58656498-58656517 | MS.gene61749:intron | 30.0% |
| ! | TTTGAGTTCAAGTTATCAGA+AGG | - | chr8.4:58655232-58655251 | None:intergenic | 30.0% |
| !! | CTTAGCCTATTGATAGTTTT+TGG | + | chr8.4:58656008-58656027 | MS.gene61749:intron | 30.0% |
| !! | GAAGTCTCATCTTCTAAAAT+CGG | - | chr8.4:58657219-58657238 | None:intergenic | 30.0% |
| !!! | GAGGCTTGTTTTTAAATTGA+AGG | + | chr8.4:58657717-58657736 | MS.gene61749:CDS | 30.0% |
| AAAGAGGGAAGAGAAAGAAA+TGG | - | chr8.4:58655909-58655928 | None:intergenic | 35.0% | |
| AAAGTTTCCAGAAACACTTG+TGG | + | chr8.4:58658465-58658484 | MS.gene61749:intron | 35.0% | |
| AACTCTTCAGAATCACTTTG+AGG | + | chr8.4:58655019-58655038 | MS.gene61749:intron | 35.0% | |
| AAGTTGTTCTTGAGAAAGAG+AGG | - | chr8.4:58658707-58658726 | None:intergenic | 35.0% | |
| ACAGCTGCAATAATCAGATA+TGG | - | chr8.4:58655686-58655705 | None:intergenic | 35.0% | |
| ACCACCTAATTCAGATAGAA+AGG | + | chr8.4:58656663-58656682 | MS.gene61749:CDS | 35.0% | |
| ACTAACATACCCTAATACTG+GGG | - | chr8.4:58657102-58657121 | None:intergenic | 35.0% | |
| AGACACAATCTCTAATGTAG+AGG | + | chr8.4:58657618-58657637 | MS.gene61749:CDS | 35.0% | |
| AGTTGTTCTTGAGAAAGAGA+GGG | - | chr8.4:58658706-58658725 | None:intergenic | 35.0% | |
| ATAATTCGCAACAGAAATCG+AGG | + | chr8.4:58656045-58656064 | MS.gene61749:intron | 35.0% | |
| ATATCAGAACACTTAGAAGG+GGG | + | chr8.4:58657562-58657581 | MS.gene61749:CDS | 35.0% | |
| ATATGGATGTCAAACTGTCA+AGG | - | chr8.4:58656176-58656195 | None:intergenic | 35.0% | |
| ATCAACACACTCTCTTTGAT+TGG | + | chr8.4:58657930-58657949 | MS.gene61749:intron | 35.0% | |
| ATGGTCATTAAGGAGTAACA+AGG | - | chr8.4:58655667-58655686 | None:intergenic | 35.0% | |
| ATTGTGTATCCACTAGATAC+TGG | + | chr8.4:58657129-58657148 | MS.gene61749:intron | 35.0% | |
| ATTTGCCAGTTTCCTTCTAA+CGG | + | chr8.4:58658908-58658927 | MS.gene61749:intron | 35.0% | |
| CAACTTTCGACACTATTTGA+AGG | - | chr8.4:58658143-58658162 | None:intergenic | 35.0% | |
| CACGCAATTTGTCTACAATA+TGG | - | chr8.4:58656193-58656212 | None:intergenic | 35.0% | |
| CTCTCCTTTCTATCTGAATT+AGG | - | chr8.4:58656670-58656689 | None:intergenic | 35.0% | |
| CTCTTGGTGAATCTTAGAAA+AGG | + | chr8.4:58657398-58657417 | MS.gene61749:intron | 35.0% | |
| CTTGTGAGAGAATAATTCCA+TGG | - | chr8.4:58656454-58656473 | None:intergenic | 35.0% | |
| GGGTCCCATATAAATTTGAT+GGG | - | chr8.4:58657973-58657992 | None:intergenic | 35.0% | |
| GGTACAAAAAACTTACCAGA+CGG | + | chr8.4:58657275-58657294 | MS.gene61749:intron | 35.0% | |
| GTATGAAATCCATAAACAGG+TGG | - | chr8.4:58657834-58657853 | None:intergenic | 35.0% | |
| TACAGTTCTTGGACAATCAA+CGG | - | chr8.4:58656887-58656906 | None:intergenic | 35.0% | |
| TATCAAGTACCAGTATCTAG+TGG | - | chr8.4:58657141-58657160 | None:intergenic | 35.0% | |
| TATCATGCTTCATATGACTG+AGG | - | chr8.4:58656333-58656352 | None:intergenic | 35.0% | |
| TCACAACATATAGAGGATCA+GGG | + | chr8.4:58658332-58658351 | MS.gene61749:CDS | 35.0% | |
| TCCTCTATATGTTGTGAAAC+AGG | - | chr8.4:58658329-58658348 | None:intergenic | 35.0% | |
| TCCTTTCTATCTGAATTAGG+TGG | - | chr8.4:58656667-58656686 | None:intergenic | 35.0% | |
| TCTGCTCATCAATACTTTAC+CGG | - | chr8.4:58655200-58655219 | None:intergenic | 35.0% | |
| TGCTGCCAAAAACTATCAAT+AGG | - | chr8.4:58656016-58656035 | None:intergenic | 35.0% | |
| TGGAACGTATTCTTTATGCA+TGG | + | chr8.4:58656950-58656969 | MS.gene61749:CDS | 35.0% | |
| TGGGTCCCATATAAATTTGA+TGG | - | chr8.4:58657974-58657993 | None:intergenic | 35.0% | |
| TGTTTGTCAAAGTTGCTTGA+CGG | + | chr8.4:58657655-58657674 | MS.gene61749:CDS | 35.0% | |
| TTAAAAATCTCAACCTCCCT+CGG | + | chr8.4:58655478-58655497 | MS.gene61749:CDS | 35.0% | |
| TTACACTGGTAGGCAAAAAT+AGG | - | chr8.4:58656143-58656162 | None:intergenic | 35.0% | |
| TTCAACACACTCTCTTTGAT+TGG | - | chr8.4:58658028-58658047 | None:intergenic | 35.0% | |
| TTCACAACATATAGAGGATC+AGG | + | chr8.4:58658331-58658350 | MS.gene61749:CDS | 35.0% | |
| ! | AAGTTCAATAAGGTGCTTTC+TGG | + | chr8.4:58655571-58655590 | MS.gene61749:CDS | 35.0% |
| ! | ACTCCTTTTGTAGAATGTTG+AGG | - | chr8.4:58655260-58655279 | None:intergenic | 35.0% |
| ! | AGTATCTAGTGGATACACAA+TGG | - | chr8.4:58657130-58657149 | None:intergenic | 35.0% |
| ! | TCTGGAACAGTGGTTATATT+AGG | + | chr8.4:58655589-58655608 | MS.gene61749:CDS | 35.0% |
| !! | ATATTAGAGCTCTGAATACC+TGG | - | chr8.4:58656792-58656811 | None:intergenic | 35.0% |
| !! | ATTTCTGAACTTGTTGTTGC+TGG | - | chr8.4:58656927-58656946 | None:intergenic | 35.0% |
| !! | GTAAAGTATTGATGAGCAGA+AGG | + | chr8.4:58655200-58655219 | MS.gene61749:CDS | 35.0% |
| !!! | AGATGGTACACTTTTTTCTC+AGG | + | chr8.4:58657756-58657775 | MS.gene61749:intron | 35.0% |
| !!! | ATTGATAGTTTTTGGCAGCA+AGG | + | chr8.4:58656016-58656035 | MS.gene61749:intron | 35.0% |
| AAAACAAGCCTCTGAATTCC+AGG | - | chr8.4:58657709-58657728 | None:intergenic | 40.0% | |
| AAACCCTACGAAACGTTCAA+GGG | + | chr8.4:58654392-58654411 | MS.gene61749:CDS | 40.0% | |
| AAAGATGACTCTTAGCTGCT+TGG | + | chr8.4:58657051-58657070 | MS.gene61749:intron | 40.0% | |
| AAATCCATAAACAGGTGGTG+AGG | - | chr8.4:58657829-58657848 | None:intergenic | 40.0% | |
| AATTGAAGGAATTGGTCAGG+AGG | + | chr8.4:58657731-58657750 | MS.gene61749:CDS | 40.0% | |
| AGATAGAAAGGAGAGAGTTC+TGG | + | chr8.4:58656675-58656694 | MS.gene61749:CDS | 40.0% | |
| AGTTTCTCACACAATGATGC+TGG | + | chr8.4:58655277-58655296 | MS.gene61749:CDS | 40.0% | |
| ATACATAAGGAAGTCTGGCA+AGG | - | chr8.4:58658886-58658905 | None:intergenic | 40.0% | |
| ATATGACTGAGGTATGTGCT+CGG | - | chr8.4:58656322-58656341 | None:intergenic | 40.0% | |
| ATATGTTGTGAAACAGGCTC+TGG | - | chr8.4:58658323-58658342 | None:intergenic | 40.0% | |
| ATCACAACTTCCCCAGTATT+AGG | + | chr8.4:58657089-58657108 | MS.gene61749:intron | 40.0% | |
| ATTACCCTTGAACGTTTCGT+AGG | - | chr8.4:58654399-58654418 | None:intergenic | 40.0% | |
| ATTATATGCGCCCTAAAGTG+TGG | + | chr8.4:58656237-58656256 | MS.gene61749:CDS | 40.0% | |
| CATTACACATTTGCTCAACC+TGG | + | chr8.4:58657688-58657707 | MS.gene61749:CDS | 40.0% | |
| CATTATCAGCCGGTATGTAT+CGG | - | chr8.4:58659054-58659073 | None:intergenic | 40.0% | |
| CTGCTCATCAATACTTTACC+GGG | - | chr8.4:58655199-58655218 | None:intergenic | 40.0% | |
| GAATCCAAACATTCAAGTCG+TGG | - | chr8.4:58654635-58654654 | None:intergenic | 40.0% | |
| GATAGAAAGGAGAGAGTTCT+GGG | + | chr8.4:58656676-58656695 | MS.gene61749:CDS | 40.0% | |
| GCCTGTTTCACAACATATAG+AGG | + | chr8.4:58658325-58658344 | MS.gene61749:CDS | 40.0% | |
| TAAAAATCTCAACCTCCCTC+GGG | + | chr8.4:58655479-58655498 | MS.gene61749:CDS | 40.0% | |
| TAGCACCAATGGTATACTTG+CGG | - | chr8.4:58655525-58655544 | None:intergenic | 40.0% | |
| TAGTCTAGTGATCTCTGTCA+TGG | + | chr8.4:58657012-58657031 | MS.gene61749:intron | 40.0% | |
| TATATGGGACCCACATGATT+TGG | + | chr8.4:58657981-58658000 | MS.gene61749:intron | 40.0% | |
| TCAAAAGACAGTTGAACCAC+CGG | - | chr8.4:58658382-58658401 | None:intergenic | 40.0% | |
| TCAACCACGACTTGAATGTT+TGG | + | chr8.4:58654628-58654647 | MS.gene61749:intron | 40.0% | |
| TCACAACTTCCCCAGTATTA+GGG | + | chr8.4:58657090-58657109 | MS.gene61749:intron | 40.0% | |
| TGTTCAGGAATGGTACTTGT+TGG | + | chr8.4:58659000-58659019 | MS.gene61749:intron | 40.0% | |
| TTACCCTTGAACGTTTCGTA+GGG | - | chr8.4:58654398-58654417 | None:intergenic | 40.0% | |
| TTACCTCTTCCGATACATAC+CGG | + | chr8.4:58659042-58659061 | MS.gene61749:CDS | 40.0% | |
| TTCAGCTTAGTGAGTGTGTT+TGG | + | chr8.4:58654787-58654806 | MS.gene61749:intron | 40.0% | |
| TTCTTGAGAAAGAGAGGGTT+TGG | - | chr8.4:58658701-58658720 | None:intergenic | 40.0% | |
| ! | CAGGTTGAGCAAATGTGTAA+TGG | - | chr8.4:58657690-58657709 | None:intergenic | 40.0% |
| ! | CTATAAGAAGGTATGATGGG+AGG | - | chr8.4:58656590-58656609 | None:intergenic | 40.0% |
| ! | TAGAAGGGGGTATAGATGAT+TGG | + | chr8.4:58657575-58657594 | MS.gene61749:CDS | 40.0% |
| ! | TCGTTTTCCACAAGTGTTTC+TGG | - | chr8.4:58658475-58658494 | None:intergenic | 40.0% |
| ! | TTACGCTCATGATTTTCTCG+TGG | - | chr8.4:58654331-58654350 | None:intergenic | 40.0% |
| ! | TTCGGATAAGTTTTTCCCGA+GGG | - | chr8.4:58655497-58655516 | None:intergenic | 40.0% |
| ! | TTCTTCAATTTGCTTTCCGG+TGG | + | chr8.4:58658363-58658382 | MS.gene61749:CDS | 40.0% |
| ! | TTGCGTGAATTAACTTGGAG+TGG | + | chr8.4:58656206-58656225 | MS.gene61749:CDS | 40.0% |
| !! | ACTTTAGGGCGCATATAATC+TGG | - | chr8.4:58656236-58656255 | None:intergenic | 40.0% |
| !! | TTGTGATTGTTATGATGGGC+CGG | - | chr8.4:58655876-58655895 | None:intergenic | 40.0% |
| AAGAGGAGTCTCCACACTTT+AGG | - | chr8.4:58656251-58656270 | None:intergenic | 45.0% | |
| AATGCCTCACCACCTGTTTA+TGG | + | chr8.4:58657822-58657841 | MS.gene61749:intron | 45.0% | |
| ACTCCTCTTGGTAAGCTCTA+TGG | + | chr8.4:58656262-58656281 | MS.gene61749:intron | 45.0% | |
| AGACGTGTGATGAGATCGAA+AGG | - | chr8.4:58658834-58658853 | None:intergenic | 45.0% | |
| AGAGGAGTCTCCACACTTTA+GGG | - | chr8.4:58656250-58656269 | None:intergenic | 45.0% | |
| AGCACCAATGGTATACTTGC+GGG | - | chr8.4:58655524-58655543 | None:intergenic | 45.0% | |
| AGGCTAAGGCAACCATAATG+CGG | - | chr8.4:58655996-58656015 | None:intergenic | 45.0% | |
| ATCTCCTAGTCATGCTGTTC+AGG | + | chr8.4:58658985-58659004 | MS.gene61749:intron | 45.0% | |
| CAAACCCTACGAAACGTTCA+AGG | + | chr8.4:58654391-58654410 | MS.gene61749:CDS | 45.0% | |
| CATTCCTGAACAGCATGACT+AGG | - | chr8.4:58658992-58659011 | None:intergenic | 45.0% | |
| CATTTATGTGGCCAGCATCA+AGG | - | chr8.4:58656480-58656499 | None:intergenic | 45.0% | |
| CCATAATGCGGGCAGTTAAT+CGG | - | chr8.4:58655984-58656003 | None:intergenic | 45.0% | |
| CCTGCAAGTGGATATGTTCA+GGG | + | chr8.4:58657502-58657521 | MS.gene61749:CDS | 45.0% | |
| CGATCTCATCACACGTCTTT+GGG | + | chr8.4:58658836-58658855 | MS.gene61749:CDS | 45.0% | |
| CTAGTCATGCTGTTCAGGAA+TGG | + | chr8.4:58658990-58659009 | MS.gene61749:intron | 45.0% | |
| CTGCAAGTGGATATGTTCAG+GGG | + | chr8.4:58657503-58657522 | MS.gene61749:CDS | 45.0% | |
| CTTGAACGTTTCGTAGGGTT+TGG | - | chr8.4:58654393-58654412 | None:intergenic | 45.0% | |
| GAATTGGTCAGGAGGATAGA+TGG | + | chr8.4:58657739-58657758 | MS.gene61749:CDS | 45.0% | |
| GACGATCAGCCCAAATACAT+AGG | - | chr8.4:58655640-58655659 | None:intergenic | 45.0% | |
| GATTGTTAGGACAAACCTCG+CGG | - | chr8.4:58658406-58658425 | None:intergenic | 45.0% | |
| GGCACAAGTGATCAGATATC+TGG | + | chr8.4:58655298-58655317 | MS.gene61749:CDS | 45.0% | |
| GTAACGTCAGGTACAGTTCT+TGG | - | chr8.4:58656898-58656917 | None:intergenic | 45.0% | |
| TAAAGTGTGGAGACTCCTCT+TGG | + | chr8.4:58656250-58656269 | MS.gene61749:CDS | 45.0% | |
| TAACGAGCAATAACACCGTC+TGG | - | chr8.4:58657293-58657312 | None:intergenic | 45.0% | |
| TAAGCTAGCTCACCGTTAGA+AGG | - | chr8.4:58658923-58658942 | None:intergenic | 45.0% | |
| TCAGATATCTGGTGCAGTAG+AGG | + | chr8.4:58655309-58655328 | MS.gene61749:CDS | 45.0% | |
| TCAGGCTCAACATTATCAGC+CGG | - | chr8.4:58659064-58659083 | None:intergenic | 45.0% | |
| TCCTGCAAGTGGATATGTTC+AGG | + | chr8.4:58657501-58657520 | MS.gene61749:CDS | 45.0% | |
| TCGATCTCATCACACGTCTT+TGG | + | chr8.4:58658835-58658854 | MS.gene61749:CDS | 45.0% | |
| TGCTGGAAGAATGTAACGTC+AGG | - | chr8.4:58656910-58656929 | None:intergenic | 45.0% | |
| TGGGACACATATCTTGCTGA+AGG | + | chr8.4:58658855-58658874 | MS.gene61749:CDS | 45.0% | |
| TTCAGAACGTTCAGACGATG+AGG | + | chr8.4:58656753-58656772 | MS.gene61749:CDS | 45.0% | |
| TTGCTCAACCTGGAATTCAG+AGG | + | chr8.4:58657698-58657717 | MS.gene61749:CDS | 45.0% | |
| ! | AACGGTGAGCTAGCTTACTT+TGG | + | chr8.4:58658926-58658945 | MS.gene61749:intron | 45.0% |
| ! | CTTCGGATAAGTTTTTCCCG+AGG | - | chr8.4:58655498-58655517 | None:intergenic | 45.0% |
| ! | TCGTCTGAACGTTCTGAATC+AGG | - | chr8.4:58656751-58656770 | None:intergenic | 45.0% |
| !! | AGTGTGTGTGTCTAGTTCTC+TGG | - | chr8.4:58655111-58655130 | None:intergenic | 45.0% |
| !! | TAAGGTGCTTTCTGGAACAG+TGG | + | chr8.4:58655579-58655598 | MS.gene61749:CDS | 45.0% |
| !! | TACCATTGGTGCTAGAGCTA+CGG | + | chr8.4:58655531-58655550 | MS.gene61749:CDS | 45.0% |
| !! | AAAAAATTGAAAAATTATAT+AGG | - | chr8.4:58657463-58657482 | None:intergenic | 5.0% |
| AGCTCGTGCGAGCAAAATAG+AGG | - | chr8.4:58656293-58656312 | None:intergenic | 50.0% | |
| ATGGGTCCCACCAAATCATG+TGG | - | chr8.4:58657994-58658013 | None:intergenic | 50.0% | |
| ATGTAGAGGCTGACTGCTAC+TGG | + | chr8.4:58657632-58657651 | MS.gene61749:CDS | 50.0% | |
| CCCTGAACATATCCACTTGC+AGG | - | chr8.4:58657505-58657524 | None:intergenic | 50.0% | |
| CCGATTAACTGCCCGCATTA+TGG | + | chr8.4:58655981-58656000 | MS.gene61749:intron | 50.0% | |
| CGTGCGAGCAAAATAGAGGA+AGG | - | chr8.4:58656289-58656308 | None:intergenic | 50.0% | |
| CTCACAAGAGACCTTGATGC+TGG | + | chr8.4:58656466-58656485 | MS.gene61749:intron | 50.0% | |
| GACACCCGCAAGTATACCAT+TGG | + | chr8.4:58655517-58655536 | MS.gene61749:CDS | 50.0% | |
| GCTCACCGTTAGAAGGAAAC+TGG | - | chr8.4:58658916-58658935 | None:intergenic | 50.0% | |
| GGCTAAGGCAACCATAATGC+GGG | - | chr8.4:58655995-58656014 | None:intergenic | 50.0% | |
| GGTATACTTGCGGGTGTCTT+CGG | - | chr8.4:58655515-58655534 | None:intergenic | 50.0% | |
| GGTCCATAGAGCTTACCAAG+AGG | - | chr8.4:58656268-58656287 | None:intergenic | 50.0% | |
| TCCACTTGCAGGATGTCGAA+TGG | - | chr8.4:58657494-58657513 | None:intergenic | 50.0% | |
| TCGTAGGGTTTGGCTGAATC+TGG | - | chr8.4:58654383-58654402 | None:intergenic | 50.0% | |
| TCTGCAGTCTTCCACATCAC+CGG | + | chr8.4:58655854-58655873 | MS.gene61749:intron | 50.0% | |
| TGGGTCCCACCAAATCATGT+GGG | - | chr8.4:58657993-58658012 | None:intergenic | 50.0% | |
| TGTTCATTGAGGCTGAGCCA+TGG | + | chr8.4:58656434-58656453 | MS.gene61749:intron | 50.0% | |
| ! | ATGGGACCCACATGATTTGG+TGG | + | chr8.4:58657984-58658003 | MS.gene61749:intron | 50.0% |
| ! | CAACTGTCTTTTGATCCGCG+AGG | + | chr8.4:58658388-58658407 | MS.gene61749:CDS | 50.0% |
| ! | CGCTCATGATTTTCTCGTGG+AGG | - | chr8.4:58654328-58654347 | None:intergenic | 50.0% |
| ! | GGATAAGTTTTTCCCGAGGG+AGG | - | chr8.4:58655494-58655513 | None:intergenic | 50.0% |
| ! | TGGTGCTAGAGCTACGGATT+CGG | + | chr8.4:58655537-58655556 | MS.gene61749:CDS | 50.0% |
| !! | ATCCGTAGCTCTAGCACCAA+TGG | - | chr8.4:58655536-58655555 | None:intergenic | 50.0% |
| !! | GAAAGGAGAGAGTTCTGGGA+AGG | + | chr8.4:58656680-58656699 | MS.gene61749:CDS | 50.0% |
| !! | TGAGTGTGTTTGGCTCTGTG+CGG | + | chr8.4:58654797-58654816 | MS.gene61749:intron | 50.0% |
| !! | TGGGACCCACATGATTTGGT+GGG | + | chr8.4:58657985-58658004 | MS.gene61749:intron | 50.0% |
| CAGCCGGTATGTATCGGAAG+AGG | - | chr8.4:58659048-58659067 | None:intergenic | 55.0% | |
| CTCAAAGGTCGTAGCATGCC+CGG | + | chr8.4:58655178-58655197 | MS.gene61749:CDS | 55.0% | |
| GCCATTCGACATCCTGCAAG+TGG | + | chr8.4:58657490-58657509 | MS.gene61749:CDS | 55.0% | |
| TGAGGTCAACATGCTTCGCC+AGG | + | chr8.4:58656771-58656790 | MS.gene61749:CDS | 55.0% | |
| !! | AGAGTTCTGGGAAGGAAGCG+CGG | + | chr8.4:58656688-58656707 | MS.gene61749:CDS | 55.0% |
| !! | GTTATGATGGGCCGGTGATG+TGG | - | chr8.4:58655868-58655887 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 58654316 | 58659090 | 58654316 | ID=MS.gene61749 |
| chr8.4 | mRNA | 58654316 | 58659090 | 58654316 | ID=MS.gene61749.t1;Parent=MS.gene61749 |
| chr8.4 | exon | 58654316 | 58654413 | 58654316 | ID=MS.gene61749.t1.exon1;Parent=MS.gene61749.t1 |
| chr8.4 | CDS | 58654316 | 58654413 | 58654316 | ID=cds.MS.gene61749.t1;Parent=MS.gene61749.t1 |
| chr8.4 | exon | 58655174 | 58655330 | 58655174 | ID=MS.gene61749.t1.exon2;Parent=MS.gene61749.t1 |
| chr8.4 | CDS | 58655174 | 58655330 | 58655174 | ID=cds.MS.gene61749.t1;Parent=MS.gene61749.t1 |
| chr8.4 | exon | 58655427 | 58655610 | 58655427 | ID=MS.gene61749.t1.exon3;Parent=MS.gene61749.t1 |
| chr8.4 | CDS | 58655427 | 58655610 | 58655427 | ID=cds.MS.gene61749.t1;Parent=MS.gene61749.t1 |
| chr8.4 | exon | 58656201 | 58656271 | 58656201 | ID=MS.gene61749.t1.exon4;Parent=MS.gene61749.t1 |
| chr8.4 | CDS | 58656201 | 58656271 | 58656201 | ID=cds.MS.gene61749.t1;Parent=MS.gene61749.t1 |
| chr8.4 | exon | 58656655 | 58656792 | 58656655 | ID=MS.gene61749.t1.exon5;Parent=MS.gene61749.t1 |
| chr8.4 | CDS | 58656655 | 58656792 | 58656655 | ID=cds.MS.gene61749.t1;Parent=MS.gene61749.t1 |
| chr8.4 | exon | 58656880 | 58656971 | 58656880 | ID=MS.gene61749.t1.exon6;Parent=MS.gene61749.t1 |
| chr8.4 | CDS | 58656880 | 58656971 | 58656880 | ID=cds.MS.gene61749.t1;Parent=MS.gene61749.t1 |
| chr8.4 | exon | 58657489 | 58657760 | 58657489 | ID=MS.gene61749.t1.exon7;Parent=MS.gene61749.t1 |
| chr8.4 | CDS | 58657489 | 58657760 | 58657489 | ID=cds.MS.gene61749.t1;Parent=MS.gene61749.t1 |
| chr8.4 | exon | 58658324 | 58658409 | 58658324 | ID=MS.gene61749.t1.exon8;Parent=MS.gene61749.t1 |
| chr8.4 | CDS | 58658324 | 58658409 | 58658324 | ID=cds.MS.gene61749.t1;Parent=MS.gene61749.t1 |
| chr8.4 | exon | 58658828 | 58658901 | 58658828 | ID=MS.gene61749.t1.exon9;Parent=MS.gene61749.t1 |
| chr8.4 | CDS | 58658828 | 58658901 | 58658828 | ID=cds.MS.gene61749.t1;Parent=MS.gene61749.t1 |
| chr8.4 | exon | 58659039 | 58659090 | 58659039 | ID=MS.gene61749.t1.exon10;Parent=MS.gene61749.t1 |
| chr8.4 | CDS | 58659039 | 58659090 | 58659039 | ID=cds.MS.gene61749.t1;Parent=MS.gene61749.t1 |
| Gene Sequence |
| Protein sequence |
