Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62146.t1 | XP_003615684.2 | 83.5 | 582 | 28 | 4 | 1 | 540 | 39 | 594 | 7.00E-262 | 912.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62146.t1 | Q8GV43 | 53.7 | 559 | 179 | 5 | 25 | 539 | 90 | 612 | 8.5e-168 | 591.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62146.t1 | G7KE98 | 83.5 | 582 | 28 | 4 | 1 | 540 | 39 | 594 | 5.0e-262 | 912.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056526 | MS.gene62146 | 0.80112 | 1.05E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62146.t1 | MTR_5g071010 | 84.192 | 582 | 24 | 4 | 1 | 540 | 39 | 594 | 0.0 | 955 |
| MS.gene62146.t1 | MTR_5g082620 | 53.425 | 584 | 192 | 9 | 1 | 539 | 40 | 588 | 0.0 | 605 |
| MS.gene62146.t1 | MTR_5g082590 | 50.850 | 588 | 198 | 8 | 1 | 539 | 36 | 581 | 0.0 | 573 |
| MS.gene62146.t1 | MTR_3g070720 | 52.226 | 584 | 200 | 8 | 1 | 540 | 45 | 593 | 0.0 | 573 |
| MS.gene62146.t1 | MTR_3g069280 | 54.174 | 539 | 174 | 7 | 47 | 540 | 62 | 572 | 0.0 | 550 |
| MS.gene62146.t1 | MTR_5g082580 | 44.538 | 595 | 240 | 8 | 1 | 539 | 46 | 606 | 3.93e-171 | 497 |
| MS.gene62146.t1 | MTR_3g070710 | 46.154 | 585 | 229 | 12 | 1 | 539 | 42 | 586 | 1.33e-165 | 483 |
| MS.gene62146.t1 | MTR_3g070560 | 44.425 | 583 | 240 | 10 | 1 | 537 | 41 | 585 | 1.27e-157 | 462 |
| MS.gene62146.t1 | MTR_5g071040 | 44.406 | 581 | 219 | 11 | 1 | 539 | 54 | 572 | 5.47e-150 | 442 |
| MS.gene62146.t1 | MTR_3g070720 | 48.361 | 488 | 173 | 8 | 1 | 444 | 45 | 497 | 1.93e-142 | 420 |
| MS.gene62146.t1 | MTR_3g070720 | 47.826 | 460 | 161 | 8 | 1 | 416 | 45 | 469 | 6.03e-124 | 373 |
| MS.gene62146.t1 | MTR_3g070560 | 42.506 | 447 | 177 | 7 | 135 | 537 | 2 | 412 | 2.38e-114 | 345 |
| MS.gene62146.t1 | MTR_3g070720 | 47.355 | 397 | 145 | 7 | 1 | 368 | 45 | 406 | 4.71e-100 | 309 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62146.t1 | AT5G58700 | 54.017 | 585 | 192 | 8 | 1 | 540 | 45 | 597 | 0.0 | 609 |
| MS.gene62146.t1 | AT5G58700 | 54.017 | 585 | 192 | 8 | 1 | 540 | 45 | 597 | 0.0 | 609 |
| MS.gene62146.t1 | AT2G40116 | 52.901 | 586 | 186 | 8 | 1 | 539 | 70 | 612 | 0.0 | 608 |
| MS.gene62146.t1 | AT5G58690 | 51.031 | 582 | 197 | 6 | 1 | 540 | 43 | 578 | 0.0 | 566 |
| MS.gene62146.t1 | AT5G58690 | 51.031 | 582 | 197 | 6 | 1 | 540 | 43 | 578 | 0.0 | 566 |
| MS.gene62146.t1 | AT5G58690 | 51.031 | 582 | 197 | 6 | 1 | 540 | 24 | 559 | 0.0 | 566 |
| MS.gene62146.t1 | AT3G08510 | 52.308 | 585 | 191 | 11 | 1 | 540 | 40 | 581 | 0.0 | 560 |
| MS.gene62146.t1 | AT3G08510 | 52.308 | 585 | 191 | 11 | 1 | 540 | 40 | 581 | 0.0 | 560 |
| MS.gene62146.t1 | AT5G58700 | 55.233 | 516 | 156 | 7 | 70 | 540 | 4 | 489 | 0.0 | 543 |
| MS.gene62146.t1 | AT3G55940 | 50.683 | 586 | 202 | 9 | 1 | 540 | 40 | 584 | 0.0 | 542 |
| MS.gene62146.t1 | AT3G08510 | 49.231 | 585 | 180 | 12 | 1 | 540 | 40 | 552 | 1.79e-172 | 499 |
| MS.gene62146.t1 | AT3G08510 | 49.231 | 585 | 180 | 12 | 1 | 540 | 40 | 552 | 1.79e-172 | 499 |
| MS.gene62146.t1 | AT5G58670 | 42.685 | 581 | 226 | 8 | 1 | 537 | 39 | 556 | 5.42e-150 | 442 |
| MS.gene62146.t1 | AT4G38530 | 42.268 | 582 | 226 | 12 | 1 | 537 | 39 | 555 | 1.25e-142 | 423 |
| MS.gene62146.t1 | AT3G47290 | 37.347 | 573 | 247 | 11 | 3 | 539 | 34 | 530 | 2.06e-116 | 355 |
| MS.gene62146.t1 | AT3G47290 | 37.455 | 558 | 237 | 11 | 3 | 524 | 34 | 515 | 6.33e-112 | 344 |
| MS.gene62146.t1 | AT3G47220 | 37.456 | 574 | 244 | 15 | 3 | 539 | 35 | 530 | 3.17e-108 | 333 |
Find 99 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTCAATGCCTTTATAAT+AGG | 0.127135 | 5.1:-36254360 | None:intergenic |
| GGATTGAATACCTCATTATT+TGG | 0.164810 | 5.1:-36256863 | None:intergenic |
| CTGCTCAGGTAATTTCTTAT+AGG | 0.203651 | 5.1:+36255580 | MS.gene62146:CDS |
| AACATCATCTTTGGTGGAAT+TGG | 0.217676 | 5.1:-36254415 | None:intergenic |
| AGAATTCTCTCTCACACTTT+TGG | 0.234698 | 5.1:-36255986 | None:intergenic |
| GCAAGTTCAGGCACAGTTAA+AGG | 0.267197 | 5.1:-36257780 | None:intergenic |
| CAAATGTTTGAAATCCATTA+AGG | 0.273167 | 5.1:+36255479 | MS.gene62146:CDS |
| GACCAGTATATATGAAATAA+TGG | 0.273183 | 5.1:-36254287 | None:intergenic |
| AGCGAACGCATGTTCCTTAA+TGG | 0.273224 | 5.1:-36255493 | None:intergenic |
| TTCACTTCCAACTTCTCTTT+AGG | 0.284668 | 5.1:-36256884 | None:intergenic |
| TTGGAATTTAAGTACTCTTT+TGG | 0.290635 | 5.1:-36255967 | None:intergenic |
| ATCCTATACTTCAGTTCTTC+AGG | 0.310159 | 5.1:-36255925 | None:intergenic |
| CAAAGACAATAGAGGATAAC+TGG | 0.310479 | 5.1:+36257727 | MS.gene62146:CDS |
| TCCCATTATTTCATATATAC+TGG | 0.316971 | 5.1:+36254285 | MS.gene62146:CDS |
| TATTCAATGCCTTTATAATA+GGG | 0.323811 | 5.1:-36254359 | None:intergenic |
| CAACCCTCCTATTAGATCTA+AGG | 0.337822 | 5.1:+36253225 | MS.gene62146:CDS |
| ATAAAATTCGAGATAATTAC+AGG | 0.353684 | 5.1:-36255622 | None:intergenic |
| TTCTTCATTGTTACATCAGC+TGG | 0.355429 | 5.1:-36257702 | None:intergenic |
| ATAAACCTCCAGAGCTGTTC+CGG | 0.366121 | 5.1:-36253046 | None:intergenic |
| ATGAGGCAGGTTGGCATAGC+TGG | 0.369626 | 5.1:+36257675 | MS.gene62146:intron |
| TAAAACAAGAACATCATCTT+TGG | 0.382673 | 5.1:-36254424 | None:intergenic |
| ACATCATCTTTGGTGGAATT+GGG | 0.394799 | 5.1:-36254414 | None:intergenic |
| TGTGGGAGATGGATGGAGTA+TGG | 0.405885 | 5.1:+36257011 | MS.gene62146:CDS |
| TGTTCTAATTCAGGTTCATC+AGG | 0.406713 | 5.1:+36254245 | MS.gene62146:intron |
| CCTACATTCATAAGAAAGTC+TGG | 0.411811 | 5.1:-36256839 | None:intergenic |
| GAGTTGATTTCCAGTGAGAT+AGG | 0.412212 | 5.1:-36254316 | None:intergenic |
| GGATTCTGATGAAGATGAAT+GGG | 0.415064 | 5.1:+36256035 | MS.gene62146:CDS |
| TAGTGATATCCCTATTATAA+AGG | 0.415361 | 5.1:+36254350 | MS.gene62146:CDS |
| AGGGATATGGCAGAAATCTT+TGG | 0.418091 | 5.1:+36256765 | MS.gene62146:intron |
| AAACATTTGATCAAATCAAC+AGG | 0.419291 | 5.1:-36255465 | None:intergenic |
| GAGTTGTTGAGCTTGATATT+TGG | 0.429323 | 5.1:+36254391 | MS.gene62146:CDS |
| TACATTACCTTAGATCTAAT+AGG | 0.436253 | 5.1:-36253232 | None:intergenic |
| ACTACAAGCCACTGGTTGGC+TGG | 0.443070 | 5.1:+36256708 | MS.gene62146:CDS |
| ACATGACTCCGGAACAGCTC+TGG | 0.445811 | 5.1:+36253038 | None:intergenic |
| ACCAGTATATATGAAATAAT+GGG | 0.446982 | 5.1:-36254286 | None:intergenic |
| AAGAGTTATTATGACTGGAT+AGG | 0.447144 | 5.1:-36255523 | None:intergenic |
| GCTTCCTTCAAACTACCCTT+AGG | 0.448231 | 5.1:-36256457 | None:intergenic |
| GAGAGAAGTACAACTCAGTT+AGG | 0.448951 | 5.1:+36257928 | MS.gene62146:CDS |
| CCAGACTTTCTTATGAATGT+AGG | 0.454137 | 5.1:+36256839 | MS.gene62146:CDS |
| ATTCAATCCTAAAGAGAAGT+TGG | 0.456474 | 5.1:+36256877 | MS.gene62146:CDS |
| CCTTCAAGCAAAAGCTGCTC+AGG | 0.456718 | 5.1:+36255566 | MS.gene62146:CDS |
| GAGAGAGGTTGATGATGAGA+AGG | 0.459589 | 5.1:+36253081 | MS.gene62146:CDS |
| AGGATTCTGATGAAGATGAA+TGG | 0.465159 | 5.1:+36256034 | MS.gene62146:CDS |
| TACACAAAATGAAGATGATA+AGG | 0.467374 | 5.1:+36256083 | MS.gene62146:CDS |
| AGGATAACTGGATACCTACT+TGG | 0.472804 | 5.1:+36257739 | MS.gene62146:CDS |
| CTTGAAGGTCTGAGGTAAGA+TGG | 0.476823 | 5.1:-36255551 | None:intergenic |
| GAGGTTGATGATGAGAAGGA+TGG | 0.479346 | 5.1:+36253085 | MS.gene62146:CDS |
| CGAGGTGACACGTGTACCCT+TGG | 0.479526 | 5.1:-36256681 | None:intergenic |
| CATCGAATGTTTAGATCCAA+TGG | 0.482284 | 5.1:+36256794 | MS.gene62146:CDS |
| GGAAGTGAAGAAGACTCTTA+AGG | 0.485765 | 5.1:+36256898 | MS.gene62146:CDS |
| GTGAATTCTTCTTCCCAAGT+AGG | 0.486822 | 5.1:-36257753 | None:intergenic |
| AGAGTTATTATGACTGGATA+GGG | 0.489103 | 5.1:-36255522 | None:intergenic |
| AAAACCTAAGGGTAGTTTGA+AGG | 0.497454 | 5.1:+36256453 | MS.gene62146:CDS |
| TCTTCAAGAGTTATTATGAC+TGG | 0.499791 | 5.1:-36255528 | None:intergenic |
| ATTATAAAGGCATTGAATAG+AGG | 0.500119 | 5.1:+36254363 | MS.gene62146:CDS |
| ATCGAATGTTTAGATCCAAT+GGG | 0.505076 | 5.1:+36256795 | MS.gene62146:CDS |
| TGGATAGGTTAAAATATATG+TGG | 0.514224 | 5.1:+36256993 | MS.gene62146:intron |
| CACCTGAAGAACTGAAGTAT+AGG | 0.517294 | 5.1:+36255923 | MS.gene62146:CDS |
| GAAGAAAACAAAGACAATAG+AGG | 0.517311 | 5.1:+36257719 | MS.gene62146:CDS |
| GTTCCACTTTACAATCGAAA+AGG | 0.517940 | 5.1:+36257906 | MS.gene62146:CDS |
| GTATCCTCTTCGAGAACTAA+AGG | 0.519491 | 5.1:+36255656 | MS.gene62146:CDS |
| AACAAGAACATCATCTTTGG+TGG | 0.520787 | 5.1:-36254421 | None:intergenic |
| GGTCATAACTCCTATCTCAC+TGG | 0.522887 | 5.1:+36254306 | MS.gene62146:CDS |
| TACTTCAGTTCTTCAGGTGA+CGG | 0.528094 | 5.1:-36255919 | None:intergenic |
| ATTACCTTAGATCTAATAGG+AGG | 0.531527 | 5.1:-36253229 | None:intergenic |
| TGAACTTGCTTTGCTTAGAG+TGG | 0.533590 | 5.1:+36257794 | MS.gene62146:CDS |
| GTTAAAATATATGTGGGAGA+TGG | 0.540418 | 5.1:+36257000 | MS.gene62146:CDS |
| ACTCTAAGCAAAGCAAGTTC+AGG | 0.549966 | 5.1:-36257792 | None:intergenic |
| GGTTGAATTCAGCAGAGAAA+AGG | 0.550704 | 5.1:-36253207 | None:intergenic |
| TGGAGGAAGTGCTGCAGAAG+CGG | 0.552240 | 5.1:+36253128 | MS.gene62146:CDS |
| AAATATATGTGGGAGATGGA+TGG | 0.558373 | 5.1:+36257004 | MS.gene62146:CDS |
| GAGGTGACACGTGTACCCTT+GGG | 0.560335 | 5.1:-36256680 | None:intergenic |
| CCAATCACTGAACTAAAACA+AGG | 0.561367 | 5.1:+36257873 | MS.gene62146:CDS |
| TGATACACAGAAGGTGGTGG+AGG | 0.563976 | 5.1:+36253111 | MS.gene62146:CDS |
| GTTGCTGAAATCAAAATCAA+AGG | 0.564989 | 5.1:+36256014 | MS.gene62146:CDS |
| TATCGTGGAGGTTCAGAGAG+AGG | 0.571463 | 5.1:+36253066 | MS.gene62146:CDS |
| TGATGAAGATGAATGGGGAA+AGG | 0.584071 | 5.1:+36256041 | MS.gene62146:CDS |
| GAATGTAGGTCCAAATAATG+AGG | 0.588015 | 5.1:+36256853 | MS.gene62146:CDS |
| CTCGTCGAACTACAAGCCAC+TGG | 0.588860 | 5.1:+36256700 | MS.gene62146:CDS |
| TGGTGGGGCCCACATGACTC+CGG | 0.590939 | 5.1:+36253027 | None:intergenic |
| CAATCACTGAACTAAAACAA+GGG | 0.591710 | 5.1:+36257874 | MS.gene62146:CDS |
| TTACCTTAGATCTAATAGGA+GGG | 0.601825 | 5.1:-36253228 | None:intergenic |
| TTCAGGCACAGTTAAAGGAA+AGG | 0.610669 | 5.1:-36257775 | None:intergenic |
| AATTGATACACAGAAGGTGG+TGG | 0.611302 | 5.1:+36253108 | MS.gene62146:CDS |
| TATATGAAATAATGGGACAA+TGG | 0.614028 | 5.1:-36254279 | None:intergenic |
| TGACTCCGGAACAGCTCTGG+AGG | 0.614053 | 5.1:+36253041 | MS.gene62146:CDS |
| GATTCTGATGAAGATGAATG+GGG | 0.619806 | 5.1:+36256036 | MS.gene62146:CDS |
| CCAAGCATCCAGCCAACCAG+TGG | 0.621623 | 5.1:-36256716 | None:intergenic |
| GGATAGGTTAAAATATATGT+GGG | 0.623354 | 5.1:+36256994 | MS.gene62146:intron |
| GGATAACTGGATACCTACTT+GGG | 0.627164 | 5.1:+36257740 | MS.gene62146:CDS |
| TGGAATTGATACACAGAAGG+TGG | 0.632697 | 5.1:+36253105 | MS.gene62146:CDS |
| TCGAACTACAAGCCACTGGT+TGG | 0.635611 | 5.1:+36256704 | MS.gene62146:CDS |
| GGATGGAATTGATACACAGA+AGG | 0.635682 | 5.1:+36253102 | MS.gene62146:CDS |
| CACGCCTTTAGTTCTCGAAG+AGG | 0.638865 | 5.1:-36255660 | None:intergenic |
| GCTCTGGAGGTTTATCGTGG+AGG | 0.645693 | 5.1:+36253054 | MS.gene62146:CDS |
| ACAGCTCTGGAGGTTTATCG+TGG | 0.661181 | 5.1:+36253051 | MS.gene62146:CDS |
| CAGTGGCTTGTAGTTCGACG+AGG | 0.682847 | 5.1:-36256699 | None:intergenic |
| TCGAATGTTTAGATCCAATG+GGG | 0.693138 | 5.1:+36256796 | MS.gene62146:CDS |
| CGAATGTTTAGATCCAATGG+GGG | 0.716144 | 5.1:+36256797 | MS.gene62146:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAATAATAAAAATT+TGG | - | chr5.1:36254611-36254630 | None:intergenic | 0.0% |
| !! | GTTTATAACTTATATAAAAA+CGG | - | chr5.1:36256178-36256197 | None:intergenic | 10.0% |
| !!! | TACAATTTGATTTTTTATAA+AGG | - | chr5.1:36255022-36255041 | None:intergenic | 10.0% |
| !!! | ATAAAACGTGTAAATTTTAT+AGG | + | chr5.1:36255730-36255749 | MS.gene62146:intron | 15.0% |
| !!! | TAAAACGTGTAAATTTTATA+GGG | + | chr5.1:36255731-36255750 | MS.gene62146:intron | 15.0% |
| !!! | TTGTTTAAATTTTCATCATT+TGG | - | chr5.1:36255895-36255914 | None:intergenic | 15.0% |
| !! | AAAATAAAGACTGTTTGAAT+TGG | - | chr5.1:36256300-36256319 | None:intergenic | 20.0% |
| !! | AATTCAAAGAAAAAGATTAC+TGG | - | chr5.1:36255357-36255376 | None:intergenic | 20.0% |
| !! | ACCAGTATATATGAAATAAT+GGG | - | chr5.1:36254289-36254308 | None:intergenic | 20.0% |
| !! | AGTAGATTATTTGTATACTT+AGG | - | chr5.1:36256561-36256580 | None:intergenic | 20.0% |
| !! | ATAAAATTCGAGATAATTAC+AGG | - | chr5.1:36255625-36255644 | None:intergenic | 20.0% |
| !! | ATTAACTTAACATCACTAAT+AGG | - | chr5.1:36254222-36254241 | None:intergenic | 20.0% |
| !! | ATTCTACATTCTAATTGTAA+TGG | + | chr5.1:36256607-36256626 | MS.gene62146:intron | 20.0% |
| !! | CAAACATATGCATTAAATTA+AGG | - | chr5.1:36254129-36254148 | None:intergenic | 20.0% |
| !! | TAGATGATTACTTAAACATT+TGG | + | chr5.1:36255853-36255872 | MS.gene62146:intron | 20.0% |
| !! | TATTCAATGCCTTTATAATA+GGG | - | chr5.1:36254362-36254381 | None:intergenic | 20.0% |
| !! | TTAGAATGTAGAATAGTTTA+AGG | - | chr5.1:36256601-36256620 | None:intergenic | 20.0% |
| !! | TTGAAGCTTAAATAACTTTA+AGG | + | chr5.1:36257190-36257209 | MS.gene62146:intron | 20.0% |
| !!! | AATCATTTGTTATATCTGAA+AGG | + | chr5.1:36255769-36255788 | MS.gene62146:intron | 20.0% |
| !!! | AGTTTTGAAGTTAATATGAA+TGG | + | chr5.1:36253978-36253997 | MS.gene62146:intron | 20.0% |
| !!! | ATTATGTTGTTTTGATTCAA+TGG | + | chr5.1:36253269-36253288 | MS.gene62146:intron | 20.0% |
| !!! | ATTATTGAATATTTTCTCTC+TGG | - | chr5.1:36253395-36253414 | None:intergenic | 20.0% |
| !!! | TGTATTTAATTTATTCTCAC+TGG | + | chr5.1:36256973-36256992 | MS.gene62146:intron | 20.0% |
| !!! | TTGGTATTTTTACTAGTTAT+TGG | + | chr5.1:36254070-36254089 | MS.gene62146:intron | 20.0% |
| !!! | TTTATCTTCTTCAACTTTTA+AGG | - | chr5.1:36256482-36256501 | None:intergenic | 20.0% |
| !!! | TTTCTTTCTATTTTCTTACA+GGG | + | chr5.1:36256319-36256338 | MS.gene62146:intron | 20.0% |
| !!! | TTTTCTTTCTATTTTCTTAC+AGG | + | chr5.1:36256318-36256337 | MS.gene62146:intron | 20.0% |
| ! | AAACATCTTATAACATGTTC+AGG | - | chr5.1:36256217-36256236 | None:intergenic | 25.0% |
| ! | AAACATTTGATCAAATCAAC+AGG | - | chr5.1:36255468-36255487 | None:intergenic | 25.0% |
| ! | AAAGTTATTTAAGCTTCAAG+TGG | - | chr5.1:36257189-36257208 | None:intergenic | 25.0% |
| ! | ACATTATCTTGTGAAAATAG+AGG | - | chr5.1:36256141-36256160 | None:intergenic | 25.0% |
| ! | AGGTCTATTTACAAGTTATT+TGG | + | chr5.1:36257280-36257299 | MS.gene62146:intron | 25.0% |
| ! | ATAAATTCACATGTAAGCTA+AGG | - | chr5.1:36257657-36257676 | None:intergenic | 25.0% |
| ! | CAAATTAAGTAAACTTGGAT+TGG | - | chr5.1:36254160-36254179 | None:intergenic | 25.0% |
| ! | CTATTCAATGCCTTTATAAT+AGG | - | chr5.1:36254363-36254382 | None:intergenic | 25.0% |
| ! | CTTTGAATTTACATATTTGC+TGG | + | chr5.1:36255368-36255387 | MS.gene62146:intron | 25.0% |
| ! | GACCAGTATATATGAAATAA+TGG | - | chr5.1:36254290-36254309 | None:intergenic | 25.0% |
| ! | GCAGTTATATTGTAAATCAA+AGG | - | chr5.1:36257119-36257138 | None:intergenic | 25.0% |
| ! | GGATAGGTTAAAATATATGT+GGG | + | chr5.1:36256994-36257013 | MS.gene62146:intron | 25.0% |
| ! | GTTAATTTCTGTTCTAATTC+AGG | + | chr5.1:36254236-36254255 | MS.gene62146:intron | 25.0% |
| ! | TAAAACAAGAACATCATCTT+TGG | - | chr5.1:36254427-36254446 | None:intergenic | 25.0% |
| ! | TAAATAGAAAAAACTTACCC+TGG | - | chr5.1:36257085-36257104 | None:intergenic | 25.0% |
| ! | TACACAAAATGAAGATGATA+AGG | + | chr5.1:36256083-36256102 | MS.gene62146:CDS | 25.0% |
| ! | TACATTACCTTAGATCTAAT+AGG | - | chr5.1:36253235-36253254 | None:intergenic | 25.0% |
| ! | TACTAGTTATTGGATGAAAA+AGG | + | chr5.1:36254080-36254099 | MS.gene62146:intron | 25.0% |
| ! | TAGAATAGTTTAAGGAAAAG+TGG | - | chr5.1:36256593-36256612 | None:intergenic | 25.0% |
| ! | TAGTGATATCCCTATTATAA+AGG | + | chr5.1:36254350-36254369 | MS.gene62146:CDS | 25.0% |
| ! | TCCCATTATTTCATATATAC+TGG | + | chr5.1:36254285-36254304 | MS.gene62146:CDS | 25.0% |
| ! | TGGATAGGTTAAAATATATG+TGG | + | chr5.1:36256993-36257012 | MS.gene62146:intron | 25.0% |
| ! | TTAATTTATTCTCACTGGAT+AGG | + | chr5.1:36256978-36256997 | MS.gene62146:intron | 25.0% |
| ! | TTCTGCAAATTAAGTAAACT+TGG | - | chr5.1:36254165-36254184 | None:intergenic | 25.0% |
| ! | TTGAAGTTAATATGAATGGA+AGG | + | chr5.1:36253982-36254001 | MS.gene62146:intron | 25.0% |
| !! | ATATCCTCAAAAAGTTTTTC+TGG | - | chr5.1:36256658-36256677 | None:intergenic | 25.0% |
| !! | ATTTTGTGTATGTACAACAT+CGG | - | chr5.1:36256073-36256092 | None:intergenic | 25.0% |
| !! | CAAATGTTTGAAATCCATTA+AGG | + | chr5.1:36255479-36255498 | MS.gene62146:CDS | 25.0% |
| !! | TATATGAAATAATGGGACAA+TGG | - | chr5.1:36254282-36254301 | None:intergenic | 25.0% |
| !! | TATCCTCAAAAAGTTTTTCT+GGG | - | chr5.1:36256657-36256676 | None:intergenic | 25.0% |
| !! | TGGTTTCTATTTTGTATGAT+AGG | + | chr5.1:36256627-36256646 | MS.gene62146:intron | 25.0% |
| !! | TTGGAATTTAAGTACTCTTT+TGG | - | chr5.1:36255970-36255989 | None:intergenic | 25.0% |
| !!! | AACAAAGTGTTTTCAAATAG+AGG | + | chr5.1:36253831-36253850 | MS.gene62146:intron | 25.0% |
| !!! | ACACTTTTAAGAAGTACATT+AGG | - | chr5.1:36253672-36253691 | None:intergenic | 25.0% |
| !!! | ATTATAAAGGCATTGAATAG+AGG | + | chr5.1:36254363-36254382 | MS.gene62146:CDS | 25.0% |
| !!! | CACTTTTAAGAAGTACATTA+GGG | - | chr5.1:36253671-36253690 | None:intergenic | 25.0% |
| !!! | CTTCAAAACTGCTTTAAAAA+GGG | - | chr5.1:36254760-36254779 | None:intergenic | 25.0% |
| !!! | TCTTCAAAACTGCTTTAAAA+AGG | - | chr5.1:36254761-36254780 | None:intergenic | 25.0% |
| !!! | TGAAAAAGGCAAGTTTTTTT+AGG | + | chr5.1:36254094-36254113 | MS.gene62146:intron | 25.0% |
| !!! | TTTCTAGAGTACATTTGTTA+AGG | + | chr5.1:36257260-36257279 | MS.gene62146:intron | 25.0% |
| AAACTGAACTGAACAATGAA+TGG | + | chr5.1:36254924-36254943 | MS.gene62146:intron | 30.0% | |
| AACAAATTTCTCTTCTGCTT+TGG | + | chr5.1:36254832-36254851 | MS.gene62146:intron | 30.0% | |
| AACTTGTAGAGACATAAAAG+TGG | + | chr5.1:36255692-36255711 | MS.gene62146:intron | 30.0% | |
| AAGAGTTATTATGACTGGAT+AGG | - | chr5.1:36255526-36255545 | None:intergenic | 30.0% | |
| AAGTTAATATGAATGGAAGG+TGG | + | chr5.1:36253985-36254004 | MS.gene62146:intron | 30.0% | |
| AATAGTTTAAGGAAAAGTGG+AGG | - | chr5.1:36256590-36256609 | None:intergenic | 30.0% | |
| AGAGTTATTATGACTGGATA+GGG | - | chr5.1:36255525-36255544 | None:intergenic | 30.0% | |
| AGCTTACATGTGAATTTATG+AGG | + | chr5.1:36257658-36257677 | MS.gene62146:intron | 30.0% | |
| AGTTAATATGAATGGAAGGT+GGG | + | chr5.1:36253986-36254005 | MS.gene62146:intron | 30.0% | |
| ATCGAATGTTTAGATCCAAT+GGG | + | chr5.1:36256795-36256814 | MS.gene62146:CDS | 30.0% | |
| ATTACCTTAGATCTAATAGG+AGG | - | chr5.1:36253232-36253251 | None:intergenic | 30.0% | |
| ATTCAATCCTAAAGAGAAGT+TGG | + | chr5.1:36256877-36256896 | MS.gene62146:CDS | 30.0% | |
| ATTCATGCTGAAAAACCTAA+GGG | + | chr5.1:36256442-36256461 | MS.gene62146:CDS | 30.0% | |
| CAATCACTGAACTAAAACAA+GGG | + | chr5.1:36257874-36257893 | MS.gene62146:CDS | 30.0% | |
| GAAGAAAACAAAGACAATAG+AGG | + | chr5.1:36257719-36257738 | MS.gene62146:CDS | 30.0% | |
| GGATTGAATACCTCATTATT+TGG | - | chr5.1:36256866-36256885 | None:intergenic | 30.0% | |
| GTTAAAATATATGTGGGAGA+TGG | + | chr5.1:36257000-36257019 | MS.gene62146:CDS | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr5.1:36254658-36254677 | None:intergenic | 30.0% | |
| GTTGCTGAAATCAAAATCAA+AGG | + | chr5.1:36256014-36256033 | MS.gene62146:CDS | 30.0% | |
| TATTCATGCTGAAAAACCTA+AGG | + | chr5.1:36256441-36256460 | MS.gene62146:CDS | 30.0% | |
| TCTTCAAGAGTTATTATGAC+TGG | - | chr5.1:36255531-36255550 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr5.1:36254662-36254681 | MS.gene62146:intron | 30.0% | |
| TTACCTTAGATCTAATAGGA+GGG | - | chr5.1:36253231-36253250 | None:intergenic | 30.0% | |
| TTCAAAACAGTGTTCTCAAT+CGG | - | chr5.1:36253921-36253940 | None:intergenic | 30.0% | |
| TTCAAATTTCACTTCACTAC+AGG | - | chr5.1:36253767-36253786 | None:intergenic | 30.0% | |
| TTCACAAAGGAAAAACAGTT+CGG | - | chr5.1:36255074-36255093 | None:intergenic | 30.0% | |
| ! | GAATTTAAGTACTCTTTTGG+AGG | - | chr5.1:36255967-36255986 | None:intergenic | 30.0% |
| ! | GATACGTAAACTTAGGTTTT+TGG | - | chr5.1:36257371-36257390 | None:intergenic | 30.0% |
| ! | GATCTTGTGTTTTCTTTGAT+TGG | + | chr5.1:36254051-36254070 | MS.gene62146:intron | 30.0% |
| ! | TTTTATAGAGGTCAATGAGT+TGG | + | chr5.1:36254630-36254649 | MS.gene62146:intron | 30.0% |
| ! | TTTTCGATTGTAAAGTGGAA+CGG | - | chr5.1:36257907-36257926 | None:intergenic | 30.0% |
| !! | CGATTTTGATACGTAAACTT+AGG | - | chr5.1:36257378-36257397 | None:intergenic | 30.0% |
| !! | TATTGCGCAATAACTGATTT+TGG | + | chr5.1:36255133-36255152 | MS.gene62146:intron | 30.0% |
| !! | TGATTCAATGGTTTGACTTT+TGG | + | chr5.1:36253281-36253300 | MS.gene62146:intron | 30.0% |
| !! | TTTTTGAGGATATATCCCAA+GGG | + | chr5.1:36256665-36256684 | MS.gene62146:CDS | 30.0% |
| !!! | AATTAGTTTTCTGTGTATCG+TGG | - | chr5.1:36253805-36253824 | None:intergenic | 30.0% |
| !!! | ATGTTCTTGTTTTACATGGA+AGG | + | chr5.1:36254433-36254452 | MS.gene62146:CDS | 30.0% |
| !!! | CAATTTGGTTTTGTTCAGTT+CGG | - | chr5.1:36255194-36255213 | None:intergenic | 30.0% |
| !!! | CTCAGGTTCACAATTTTTTT+TGG | + | chr5.1:36255801-36255820 | MS.gene62146:intron | 30.0% |
| !!! | GATGATGTTCTTGTTTTACA+TGG | + | chr5.1:36254429-36254448 | MS.gene62146:CDS | 30.0% |
| !!! | TCTTTGTTTTCAAACAGAAC+TGG | + | chr5.1:36254991-36255010 | MS.gene62146:intron | 30.0% |
| AAAAAGATTACTGGCACAGT+AGG | - | chr5.1:36255348-36255367 | None:intergenic | 35.0% | |
| AAAACCTAAGGGTAGTTTGA+AGG | + | chr5.1:36256453-36256472 | MS.gene62146:CDS | 35.0% | |
| AAATATATGTGGGAGATGGA+TGG | + | chr5.1:36257004-36257023 | MS.gene62146:CDS | 35.0% | |
| AACAAGAACATCATCTTTGG+TGG | - | chr5.1:36254424-36254443 | None:intergenic | 35.0% | |
| AACAGAACCGTTAAACTGAA+TGG | - | chr5.1:36255305-36255324 | None:intergenic | 35.0% | |
| AACAGTTTAACCACTTCCTT+TGG | + | chr5.1:36257521-36257540 | MS.gene62146:intron | 35.0% | |
| AACATCATCTTTGGTGGAAT+TGG | - | chr5.1:36254418-36254437 | None:intergenic | 35.0% | |
| AATGGTTGCATTCAATATGC+AGG | + | chr5.1:36256745-36256764 | MS.gene62146:intron | 35.0% | |
| ACATCATCTTTGGTGGAATT+GGG | - | chr5.1:36254417-36254436 | None:intergenic | 35.0% | |
| ACTACCATGAACTTCTACTT+AGG | - | chr5.1:36253465-36253484 | None:intergenic | 35.0% | |
| AGACTGTTTGAAAGAGCTTT+CGG | - | chr5.1:36256240-36256259 | None:intergenic | 35.0% | |
| AGGATTCATCATAACCAATC+GGG | + | chr5.1:36257425-36257444 | MS.gene62146:intron | 35.0% | |
| AGGATTCTGATGAAGATGAA+TGG | + | chr5.1:36256034-36256053 | MS.gene62146:CDS | 35.0% | |
| ATCCTATACTTCAGTTCTTC+AGG | - | chr5.1:36255928-36255947 | None:intergenic | 35.0% | |
| ATGGTTGCATTCAATATGCA+GGG | + | chr5.1:36256746-36256765 | MS.gene62146:intron | 35.0% | |
| CAAAGACAATAGAGGATAAC+TGG | + | chr5.1:36257727-36257746 | MS.gene62146:CDS | 35.0% | |
| CACGAGTGACATTTCAAAAA+AGG | + | chr5.1:36253953-36253972 | MS.gene62146:intron | 35.0% | |
| CAGGATTCATCATAACCAAT+CGG | + | chr5.1:36257424-36257443 | MS.gene62146:intron | 35.0% | |
| CATCGAATGTTTAGATCCAA+TGG | + | chr5.1:36256794-36256813 | MS.gene62146:CDS | 35.0% | |
| CCAATCACTGAACTAAAACA+AGG | + | chr5.1:36257873-36257892 | MS.gene62146:CDS | 35.0% | |
| CCAGACTTTCTTATGAATGT+AGG | + | chr5.1:36256839-36256858 | MS.gene62146:CDS | 35.0% | |
| CCTACATTCATAAGAAAGTC+TGG | - | chr5.1:36256842-36256861 | None:intergenic | 35.0% | |
| CGTATCAAAATCGAGTTAAC+AGG | + | chr5.1:36257385-36257404 | MS.gene62146:intron | 35.0% | |
| CTGATCAACACATTGCAAAA+TGG | + | chr5.1:36254470-36254489 | MS.gene62146:intron | 35.0% | |
| CTGCTCAGGTAATTTCTTAT+AGG | + | chr5.1:36255580-36255599 | MS.gene62146:CDS | 35.0% | |
| GAATGTAGGTCCAAATAATG+AGG | + | chr5.1:36256853-36256872 | MS.gene62146:CDS | 35.0% | |
| GAGTTGTTGAGCTTGATATT+TGG | + | chr5.1:36254391-36254410 | MS.gene62146:CDS | 35.0% | |
| GATTCTGATGAAGATGAATG+GGG | + | chr5.1:36256036-36256055 | MS.gene62146:CDS | 35.0% | |
| GGATTCTGATGAAGATGAAT+GGG | + | chr5.1:36256035-36256054 | MS.gene62146:CDS | 35.0% | |
| GTTCAATTCAGTCCATGAAT+TGG | - | chr5.1:36255222-36255241 | None:intergenic | 35.0% | |
| GTTCCACTTTACAATCGAAA+AGG | + | chr5.1:36257906-36257925 | MS.gene62146:CDS | 35.0% | |
| TACATGTGAATTTATGAGGC+AGG | + | chr5.1:36257662-36257681 | MS.gene62146:intron | 35.0% | |
| TCAAAACAGTGTTCTCAATC+GGG | - | chr5.1:36253920-36253939 | None:intergenic | 35.0% | |
| TCGAATGTTTAGATCCAATG+GGG | + | chr5.1:36256796-36256815 | MS.gene62146:CDS | 35.0% | |
| TCTTCAAAACTATCTTCACC+TGG | - | chr5.1:36254025-36254044 | None:intergenic | 35.0% | |
| TCTTCCTAAGTAGAAGTTCA+TGG | + | chr5.1:36253458-36253477 | MS.gene62146:intron | 35.0% | |
| TTCACTTCCAACTTCTCTTT+AGG | - | chr5.1:36256887-36256906 | None:intergenic | 35.0% | |
| TTCTTCATTGTTACATCAGC+TGG | - | chr5.1:36257705-36257724 | None:intergenic | 35.0% | |
| TTGAAGAAGATAAAGTGAGC+CGG | + | chr5.1:36256488-36256507 | MS.gene62146:intron | 35.0% | |
| TTTATAGTAGTGCAACGTAG+CGG | + | chr5.1:36253864-36253883 | MS.gene62146:intron | 35.0% | |
| ! | AAAAGGTGCAAGATTCACAA+AGG | - | chr5.1:36255087-36255106 | None:intergenic | 35.0% |
| ! | AAATTCCCTTTTTGTCCCTT+CGG | + | chr5.1:36254502-36254521 | MS.gene62146:intron | 35.0% |
| ! | AGAATTCTCTCTCACACTTT+TGG | - | chr5.1:36255989-36256008 | None:intergenic | 35.0% |
| ! | ATCTCATTTTGAATCCCGAT+TGG | - | chr5.1:36257442-36257461 | None:intergenic | 35.0% |
| ! | ATGTCATTGTCCTTGCTATA+AGG | + | chr5.1:36253635-36253654 | MS.gene62146:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr5.1:36254642-36254661 | MS.gene62146:intron | 35.0% |
| ! | TATGTTTCTGTCTCAAGTGT+TGG | + | chr5.1:36253318-36253337 | MS.gene62146:intron | 35.0% |
| ! | TCACCCAGAAAAACTTTTTG+AGG | + | chr5.1:36256651-36256670 | MS.gene62146:intron | 35.0% |
| ! | TCTCCTTTTCGATTGTAAAG+TGG | - | chr5.1:36257912-36257931 | None:intergenic | 35.0% |
| ! | TGTTCTAATTCAGGTTCATC+AGG | + | chr5.1:36254245-36254264 | MS.gene62146:intron | 35.0% |
| !! | CTATTTCTGTAATCGTCCAA+AGG | - | chr5.1:36257540-36257559 | None:intergenic | 35.0% |
| !! | CTTTTTGAGGATATATCCCA+AGG | + | chr5.1:36256664-36256683 | MS.gene62146:CDS | 35.0% |
| !! | GTCTCAAGTGTTGGATTAAT+TGG | + | chr5.1:36253352-36253371 | MS.gene62146:intron | 35.0% |
| !! | GTTTTAGCGAACAGTTTTAG+TGG | - | chr5.1:36254908-36254927 | None:intergenic | 35.0% |
| !!! | CCTTGTTTTAGTTCAGTGAT+TGG | - | chr5.1:36257876-36257895 | None:intergenic | 35.0% |
| AATTGATACACAGAAGGTGG+TGG | + | chr5.1:36253108-36253127 | MS.gene62146:CDS | 40.0% | |
| ACTCTAAGCAAAGCAAGTTC+AGG | - | chr5.1:36257795-36257814 | None:intergenic | 40.0% | |
| AGCAAAGAACCGAACTATGA+CGG | - | chr5.1:36255274-36255293 | None:intergenic | 40.0% | |
| AGGATAACTGGATACCTACT+TGG | + | chr5.1:36257739-36257758 | MS.gene62146:CDS | 40.0% | |
| AGGGATATGGCAGAAATCTT+TGG | + | chr5.1:36256765-36256784 | MS.gene62146:intron | 40.0% | |
| ATGGAAGTGGTATATGGGTT+TGG | + | chr5.1:36254959-36254978 | MS.gene62146:intron | 40.0% | |
| CAAAACAGTGTTCTCAATCG+GGG | - | chr5.1:36253919-36253938 | None:intergenic | 40.0% | |
| CAAATTGTGACGCCAATTCA+TGG | + | chr5.1:36255207-36255226 | MS.gene62146:intron | 40.0% | |
| CAACCCTCCTATTAGATCTA+AGG | + | chr5.1:36253225-36253244 | MS.gene62146:CDS | 40.0% | |
| CACCTGAAGAACTGAAGTAT+AGG | + | chr5.1:36255923-36255942 | MS.gene62146:CDS | 40.0% | |
| CATGAATTGGCGTCACAATT+TGG | - | chr5.1:36255209-36255228 | None:intergenic | 40.0% | |
| CCAGAATGGAAGTGGTATAT+GGG | + | chr5.1:36254954-36254973 | MS.gene62146:intron | 40.0% | |
| CGAATGTTTAGATCCAATGG+GGG | + | chr5.1:36256797-36256816 | MS.gene62146:CDS | 40.0% | |
| CGATACAGAGAAGATTAGCA+TGG | + | chr5.1:36254546-36254565 | MS.gene62146:intron | 40.0% | |
| CGGTACACAAAGATACAGTT+CGG | - | chr5.1:36255054-36255073 | None:intergenic | 40.0% | |
| CGTAATTGTCCGTCATAGTT+CGG | + | chr5.1:36255262-36255281 | MS.gene62146:intron | 40.0% | |
| CTTACCCTGGCATAAAAATC+TGG | - | chr5.1:36257072-36257091 | None:intergenic | 40.0% | |
| GAACTTCTACTTAGGAAGAG+TGG | - | chr5.1:36253457-36253476 | None:intergenic | 40.0% | |
| GCATTCAATATGCAGGGATA+TGG | + | chr5.1:36256752-36256771 | MS.gene62146:intron | 40.0% | |
| GGAAGTGAAGAAGACTCTTA+AGG | + | chr5.1:36256898-36256917 | MS.gene62146:CDS | 40.0% | |
| GGATAACTGGATACCTACTT+GGG | + | chr5.1:36257740-36257759 | MS.gene62146:CDS | 40.0% | |
| GGATGGAATTGATACACAGA+AGG | + | chr5.1:36253102-36253121 | MS.gene62146:CDS | 40.0% | |
| GGTTGAATTCAGCAGAGAAA+AGG | - | chr5.1:36253210-36253229 | None:intergenic | 40.0% | |
| GTATCCTCTTCGAGAACTAA+AGG | + | chr5.1:36255656-36255675 | MS.gene62146:CDS | 40.0% | |
| GTGAATTCTTCTTCCCAAGT+AGG | - | chr5.1:36257756-36257775 | None:intergenic | 40.0% | |
| TACTTCAGTTCTTCAGGTGA+CGG | - | chr5.1:36255922-36255941 | None:intergenic | 40.0% | |
| TAGTTCGGTTCTTTGCTTTG+CGG | + | chr5.1:36255277-36255296 | MS.gene62146:intron | 40.0% | |
| TCCAGAATGGAAGTGGTATA+TGG | + | chr5.1:36254953-36254972 | MS.gene62146:intron | 40.0% | |
| TCGGGGACATCTGATAAAAT+TGG | + | chr5.1:36254521-36254540 | MS.gene62146:intron | 40.0% | |
| TGAACTTGTCCAGTTCGAAA+AGG | - | chr5.1:36255104-36255123 | None:intergenic | 40.0% | |
| TGAAGAAGACTCTTAAGGTG+AGG | + | chr5.1:36256903-36256922 | MS.gene62146:intron | 40.0% | |
| TGAATGGTATACGTCCAGAA+TGG | + | chr5.1:36254940-36254959 | MS.gene62146:intron | 40.0% | |
| TGATGAAGATGAATGGGGAA+AGG | + | chr5.1:36256041-36256060 | MS.gene62146:CDS | 40.0% | |
| TGGAATTGATACACAGAAGG+TGG | + | chr5.1:36253105-36253124 | MS.gene62146:CDS | 40.0% | |
| TGTCAATGTCCTACATTCAC+AGG | - | chr5.1:36255442-36255461 | None:intergenic | 40.0% | |
| TGTGAATTTATGAGGCAGGT+TGG | + | chr5.1:36257666-36257685 | MS.gene62146:intron | 40.0% | |
| TTCAGGCACAGTTAAAGGAA+AGG | - | chr5.1:36257778-36257797 | None:intergenic | 40.0% | |
| TTCGTAAACCGAACCATGAA+CGG | - | chr5.1:36254859-36254878 | None:intergenic | 40.0% | |
| TTTCGAACTGGACAAGTTCA+AGG | + | chr5.1:36255104-36255123 | MS.gene62146:intron | 40.0% | |
| ! | AATCTTGCACCTTTTCGAAC+TGG | + | chr5.1:36255092-36255111 | MS.gene62146:intron | 40.0% |
| ! | AATTCCCTTTTTGTCCCTTC+GGG | + | chr5.1:36254503-36254522 | MS.gene62146:intron | 40.0% |
| ! | ATTTTATCAGATGTCCCCGA+AGG | - | chr5.1:36254521-36254540 | None:intergenic | 40.0% |
| ! | CTGAAAGGTGTAAATCACTC+AGG | + | chr5.1:36255784-36255803 | MS.gene62146:intron | 40.0% |
| ! | GAGAGAAGTACAACTCAGTT+AGG | + | chr5.1:36257928-36257947 | MS.gene62146:CDS | 40.0% |
| ! | GAGTTGATTTCCAGTGAGAT+AGG | - | chr5.1:36254319-36254338 | None:intergenic | 40.0% |
| ! | TCCACCAGATTTTTATGCCA+GGG | + | chr5.1:36257065-36257084 | MS.gene62146:CDS | 40.0% |
| ! | TGAACTTGCTTTGCTTAGAG+TGG | + | chr5.1:36257794-36257813 | MS.gene62146:CDS | 40.0% |
| ! | TTGTGTTGACCTGTGAATGT+AGG | + | chr5.1:36255430-36255449 | MS.gene62146:intron | 40.0% |
| ! | TTTTATCAGATGTCCCCGAA+GGG | - | chr5.1:36254520-36254539 | None:intergenic | 40.0% |
| !! | TCTGAGACAGATGATTTTGC+AGG | + | chr5.1:36257837-36257856 | MS.gene62146:CDS | 40.0% |
| ACCCTGGCATAAAAATCTGG+TGG | - | chr5.1:36257069-36257088 | None:intergenic | 45.0% | |
| AGCGAACGCATGTTCCTTAA+TGG | - | chr5.1:36255496-36255515 | None:intergenic | 45.0% | |
| ATAAACCTCCAGAGCTGTTC+CGG | - | chr5.1:36253049-36253068 | None:intergenic | 45.0% | |
| CCCATATACCACTTCCATTC+TGG | - | chr5.1:36254957-36254976 | None:intergenic | 45.0% | |
| CTGTAATCGTCCAAAGGAAG+TGG | - | chr5.1:36257534-36257553 | None:intergenic | 45.0% | |
| GACACGCACAAATCGAGAAA+TGG | + | chr5.1:36254584-36254603 | MS.gene62146:intron | 45.0% | |
| GCAAGTTCAGGCACAGTTAA+AGG | - | chr5.1:36257783-36257802 | None:intergenic | 45.0% | |
| GCTTCCTTCAAACTACCCTT+AGG | - | chr5.1:36256460-36256479 | None:intergenic | 45.0% | |
| GGTCATAACTCCTATCTCAC+TGG | + | chr5.1:36254306-36254325 | MS.gene62146:CDS | 45.0% | |
| GTATACGTCCAGAATGGAAG+TGG | + | chr5.1:36254946-36254965 | MS.gene62146:intron | 45.0% | |
| GTTGACCCAATCAACTGAGT+CGG | + | chr5.1:36253513-36253532 | MS.gene62146:intron | 45.0% | |
| TGCGGCTCCATTCAGTTTAA+CGG | + | chr5.1:36255295-36255314 | MS.gene62146:intron | 45.0% | |
| TTTAGATCCAATGGGGGATG+TGG | + | chr5.1:36256803-36256822 | MS.gene62146:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.1:36254711-36254730 | None:intergenic | 45.0% |
| ! | AGCATGTGTTGACCATTGAC+CGG | + | chr5.1:36253729-36253748 | MS.gene62146:intron | 45.0% |
| ! | AGCTTTTGCTTGAAGGTCTG+AGG | - | chr5.1:36255562-36255581 | None:intergenic | 45.0% |
| ! | ATTCCCTTTTTGTCCCTTCG+GGG | + | chr5.1:36254504-36254523 | MS.gene62146:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.1:36254712-36254731 | None:intergenic | 45.0% |
| ! | CCAAACCGACTCAGTTGATT+GGG | - | chr5.1:36253521-36253540 | None:intergenic | 45.0% |
| ! | CTCCACCAGATTTTTATGCC+AGG | + | chr5.1:36257064-36257083 | MS.gene62146:CDS | 45.0% |
| ! | CTTGAAGGTCTGAGGTAAGA+TGG | - | chr5.1:36255554-36255573 | None:intergenic | 45.0% |
| !! | GAAGCACTGAGGGTTTGTTT+AGG | - | chr5.1:36257631-36257650 | None:intergenic | 45.0% |
| !! | GAGAGAGGTTGATGATGAGA+AGG | + | chr5.1:36253081-36253100 | MS.gene62146:CDS | 45.0% |
| !! | GAGGTTGATGATGAGAAGGA+TGG | + | chr5.1:36253085-36253104 | MS.gene62146:CDS | 45.0% |
| !! | GGTATATGGGTTTGGTGCAT+TGG | + | chr5.1:36254967-36254986 | MS.gene62146:intron | 45.0% |
| !! | GTTCATGGTTCGGTTTACGA+AGG | + | chr5.1:36254858-36254877 | MS.gene62146:intron | 45.0% |
| !!! | ATTATTTTTTTATTTTATAG+AGG | + | chr5.1:36254618-36254637 | MS.gene62146:intron | 5.0% |
| AGGACTCATCACTGTGAGTC+AGG | + | chr5.1:36257405-36257424 | MS.gene62146:intron | 50.0% | |
| ATGTCCCCGAAGGGACAAAA+AGG | - | chr5.1:36254511-36254530 | None:intergenic | 50.0% | |
| CACATAACCACATCCCCCAT+TGG | - | chr5.1:36256813-36256832 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.1:36254710-36254729 | MS.gene62146:intron | 50.0% | |
| CCCAATCAACTGAGTCGGTT+TGG | + | chr5.1:36253518-36253537 | MS.gene62146:intron | 50.0% | |
| CCTTCAAGCAAAAGCTGCTC+AGG | + | chr5.1:36255566-36255585 | MS.gene62146:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.1:36254707-36254726 | None:intergenic | 50.0% | |
| GTGGGATTGAACAATGCACC+AGG | + | chr5.1:36254004-36254023 | MS.gene62146:intron | 50.0% | |
| TATCGTGGAGGTTCAGAGAG+AGG | + | chr5.1:36253066-36253085 | MS.gene62146:CDS | 50.0% | |
| TCCTCGACGTCCTTATAGCA+AGG | - | chr5.1:36253648-36253667 | None:intergenic | 50.0% | |
| TCGAACTACAAGCCACTGGT+TGG | + | chr5.1:36256704-36256723 | MS.gene62146:CDS | 50.0% | |
| TGTCCCCGAAGGGACAAAAA+GGG | - | chr5.1:36254510-36254529 | None:intergenic | 50.0% | |
| TGTGGGAGATGGATGGAGTA+TGG | + | chr5.1:36257011-36257030 | MS.gene62146:CDS | 50.0% | |
| TGTTGACCATTGACCGGTAG+TGG | + | chr5.1:36253735-36253754 | MS.gene62146:intron | 50.0% | |
| TTGGGTCAACGTCTCAGACA+AGG | - | chr5.1:36253503-36253522 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.1:36254713-36254732 | None:intergenic | 50.0% |
| ! | CCTGAGCAGCTTTTGCTTGA+AGG | - | chr5.1:36255569-36255588 | None:intergenic | 50.0% |
| ! | CTTCTGCTTTGGACCGTTCA+TGG | + | chr5.1:36254843-36254862 | MS.gene62146:intron | 50.0% |
| ! | GCCAAACCGACTCAGTTGAT+TGG | - | chr5.1:36253522-36253541 | None:intergenic | 50.0% |
| ! | GCTTTGGACCGTTCATGGTT+CGG | + | chr5.1:36254848-36254867 | MS.gene62146:intron | 50.0% |
| ! | TCCTTGCTATAAGGACGTCG+AGG | + | chr5.1:36253644-36253663 | MS.gene62146:intron | 50.0% |
| ! | TGATACACAGAAGGTGGTGG+AGG | + | chr5.1:36253111-36253130 | MS.gene62146:CDS | 50.0% |
| !! | ACAGCTCTGGAGGTTTATCG+TGG | + | chr5.1:36253051-36253070 | MS.gene62146:CDS | 50.0% |
| !! | AGCTAAGGCAAGAAGCACTG+AGG | - | chr5.1:36257642-36257661 | None:intergenic | 50.0% |
| !! | CACGCCTTTAGTTCTCGAAG+AGG | - | chr5.1:36255663-36255682 | None:intergenic | 50.0% |
| !! | CTGGATGCTTGGTGCTCAAA+TGG | + | chr5.1:36256727-36256746 | MS.gene62146:intron | 50.0% |
| !! | GCTAAGGCAAGAAGCACTGA+GGG | - | chr5.1:36257641-36257660 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+GGG | - | chr5.1:36254699-36254718 | None:intergenic | 55.0% | |
| CCTAGTGTCAGCTCAGTAGC+CGG | - | chr5.1:36256510-36256529 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.1:36254705-36254724 | MS.gene62146:intron | 55.0% | |
| CTACAGCCACTACCGGTCAA+TGG | - | chr5.1:36253744-36253763 | None:intergenic | 55.0% | |
| CTACAGGCTACAGCCACTAC+CGG | - | chr5.1:36253751-36253770 | None:intergenic | 55.0% | |
| CTCGTCGAACTACAAGCCAC+TGG | + | chr5.1:36256700-36256719 | MS.gene62146:CDS | 55.0% | |
| GAGGTGACACGTGTACCCTT+GGG | - | chr5.1:36256683-36256702 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.1:36254699-36254718 | MS.gene62146:intron | 55.0% | |
| ! | ACTACAAGCCACTGGTTGGC+TGG | + | chr5.1:36256708-36256727 | MS.gene62146:CDS | 55.0% |
| ! | ATGAGGCAGGTTGGCATAGC+TGG | + | chr5.1:36257675-36257694 | MS.gene62146:intron | 55.0% |
| ! | CAGTGGCTTGTAGTTCGACG+AGG | - | chr5.1:36256702-36256721 | None:intergenic | 55.0% |
| !! | GCTCTGGAGGTTTATCGTGG+AGG | + | chr5.1:36253054-36253073 | MS.gene62146:CDS | 55.0% |
| !! | TGGAGGAAGTGCTGCAGAAG+CGG | + | chr5.1:36253128-36253147 | MS.gene62146:CDS | 55.0% |
| ATTAGCATGGCCCCTGCGCA+AGG | + | chr5.1:36254559-36254578 | MS.gene62146:intron | 60.0% | |
| CACTAAGTGGGGTCGGCTAC+AGG | - | chr5.1:36254700-36254719 | None:intergenic | 60.0% | |
| CCAAGCATCCAGCCAACCAG+TGG | - | chr5.1:36256719-36256738 | None:intergenic | 60.0% | |
| CCGGCTACTGAGCTGACACT+AGG | + | chr5.1:36256507-36256526 | MS.gene62146:intron | 60.0% | |
| CGAGGTGACACGTGTACCCT+TGG | - | chr5.1:36256684-36256703 | None:intergenic | 60.0% | |
| CTGTAGCCGACCCCACTTAG+TGG | + | chr5.1:36254698-36254717 | MS.gene62146:intron | 60.0% | |
| GTGCGTGTCATCCTTGCGCA+GGG | - | chr5.1:36254573-36254592 | None:intergenic | 60.0% | |
| TGCGTGTCATCCTTGCGCAG+GGG | - | chr5.1:36254572-36254591 | None:intergenic | 60.0% | |
| TGTGCGTGTCATCCTTGCGC+AGG | - | chr5.1:36254574-36254593 | None:intergenic | 60.0% | |
| ! | CCACTGGTTGGCTGGATGCT+TGG | + | chr5.1:36256716-36256735 | MS.gene62146:intron | 60.0% |
| ! | TGACTCCGGAACAGCTCTGG+AGG | + | chr5.1:36253041-36253060 | MS.gene62146:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 36253040 | 36257977 | 36253040 | ID=MS.gene62146 |
| chr5.1 | mRNA | 36253040 | 36257977 | 36253040 | ID=MS.gene62146.t1;Parent=MS.gene62146 |
| chr5.1 | exon | 36253040 | 36253246 | 36253040 | ID=MS.gene62146.t1.exon1;Parent=MS.gene62146.t1 |
| chr5.1 | CDS | 36253040 | 36253246 | 36253040 | ID=cds.MS.gene62146.t1;Parent=MS.gene62146.t1 |
| chr5.1 | exon | 36254258 | 36254454 | 36254258 | ID=MS.gene62146.t1.exon2;Parent=MS.gene62146.t1 |
| chr5.1 | CDS | 36254258 | 36254454 | 36254258 | ID=cds.MS.gene62146.t1;Parent=MS.gene62146.t1 |
| chr5.1 | exon | 36255452 | 36255684 | 36255452 | ID=MS.gene62146.t1.exon3;Parent=MS.gene62146.t1 |
| chr5.1 | CDS | 36255452 | 36255684 | 36255452 | ID=cds.MS.gene62146.t1;Parent=MS.gene62146.t1 |
| chr5.1 | exon | 36255878 | 36256104 | 36255878 | ID=MS.gene62146.t1.exon4;Parent=MS.gene62146.t1 |
| chr5.1 | CDS | 36255878 | 36256104 | 36255878 | ID=cds.MS.gene62146.t1;Parent=MS.gene62146.t1 |
| chr5.1 | exon | 36256340 | 36256501 | 36256340 | ID=MS.gene62146.t1.exon5;Parent=MS.gene62146.t1 |
| chr5.1 | CDS | 36256340 | 36256501 | 36256340 | ID=cds.MS.gene62146.t1;Parent=MS.gene62146.t1 |
| chr5.1 | exon | 36256659 | 36256732 | 36256659 | ID=MS.gene62146.t1.exon6;Parent=MS.gene62146.t1 |
| chr5.1 | CDS | 36256659 | 36256732 | 36256659 | ID=cds.MS.gene62146.t1;Parent=MS.gene62146.t1 |
| chr5.1 | exon | 36256778 | 36256919 | 36256778 | ID=MS.gene62146.t1.exon7;Parent=MS.gene62146.t1 |
| chr5.1 | CDS | 36256778 | 36256919 | 36256778 | ID=cds.MS.gene62146.t1;Parent=MS.gene62146.t1 |
| chr5.1 | exon | 36257000 | 36257086 | 36257000 | ID=MS.gene62146.t1.exon8;Parent=MS.gene62146.t1 |
| chr5.1 | CDS | 36257000 | 36257086 | 36257000 | ID=cds.MS.gene62146.t1;Parent=MS.gene62146.t1 |
| chr5.1 | exon | 36257684 | 36257977 | 36257684 | ID=MS.gene62146.t1.exon9;Parent=MS.gene62146.t1 |
| chr5.1 | CDS | 36257684 | 36257977 | 36257684 | ID=cds.MS.gene62146.t1;Parent=MS.gene62146.t1 |
| Gene Sequence |
| Protein sequence |
