AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63269

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63269.t1 MTR_8g063270 99.083 981 9 0 1 981 1 981 0.0 2025
MS.gene63269.t1 MTR_8g063270 99.227 776 6 0 206 981 1 776 0.0 1598
MS.gene63269.t1 MTR_4g130510 63.697 1044 310 11 1 981 1 1038 0.0 1360
MS.gene63269.t1 MTR_4g130510 61.688 1078 310 12 1 981 1 1072 0.0 1343
MS.gene63269.t1 MTR_3g030040 54.579 1070 369 11 27 981 11 1078 0.0 1214
MS.gene63269.t1 MTR_2g035780 54.833 1045 397 14 5 981 7 1044 0.0 1196
MS.gene63269.t1 MTR_7g106680 52.358 1039 409 9 20 981 3 1032 0.0 1119
MS.gene63269.t1 MTR_2g016630 54.443 979 400 14 37 980 9 976 0.0 1117
MS.gene63269.t1 MTR_8g037260 60.610 853 297 5 164 981 230 1078 0.0 1115
MS.gene63269.t1 MTR_8g037260 54.945 91 40 1 27 116 11 101 7.43e-25 112
MS.gene63269.t1 MTR_3g007770 52.236 1051 430 13 1 981 1 1049 0.0 1114
MS.gene63269.t1 MTR_8g092590 49.819 1104 422 20 1 981 1 1095 0.0 1107
MS.gene63269.t1 MTR_8g086600 52.965 995 402 12 37 980 9 988 0.0 1098
MS.gene63269.t1 MTR_3g107520 56.057 908 330 10 110 981 213 1087 0.0 1074
MS.gene63269.t1 MTR_3g107520 43.379 219 101 5 1 206 1 209 2.00e-35 146
MS.gene63269.t1 MTR_1g069605 55.928 894 360 11 98 981 23 892 0.0 1068
MS.gene63269.t1 MTR_4g130510 62.118 850 255 9 1 787 1 846 0.0 1064
MS.gene63269.t1 MTR_1g098550 57.798 872 313 10 157 981 233 1096 0.0 1048
MS.gene63269.t1 MTR_1g098550 58.261 115 46 1 1 113 5 119 4.00e-36 148
MS.gene63269.t1 MTR_1g098550 57.798 872 313 10 157 981 229 1092 0.0 1048
MS.gene63269.t1 MTR_1g098550 58.261 115 46 1 1 113 1 115 4.23e-36 148
MS.gene63269.t1 MTR_4g130510 60.822 730 223 8 1 669 1 728 0.0 874
MS.gene63269.t1 MTR_5g029190 42.493 1059 495 23 3 964 66 1107 0.0 814
MS.gene63269.t1 MTR_4g077910 42.051 1063 489 29 5 964 90 1128 0.0 790
MS.gene63269.t1 MTR_1g039445 41.075 1042 493 24 7 964 85 1089 0.0 765
MS.gene63269.t1 MTR_1g039480 39.431 1055 513 22 7 964 92 1117 0.0 756
MS.gene63269.t1 MTR_7g109200 40.657 1065 492 26 7 964 125 1156 0.0 745
MS.gene63269.t1 MTR_2g438220 44.534 869 382 20 184 964 154 1010 0.0 739
MS.gene63269.t1 MTR_7g116230 40.468 855 345 26 163 964 102 845 0.0 578
MS.gene63269.t1 MTR_2g087900 34.655 782 464 16 182 955 3 745 1.22e-143 447
MS.gene63269.t1 MTR_3g060220 35.417 672 369 14 199 865 17 628 9.28e-131 412
MS.gene63269.t1 MTR_3g060220 35.364 673 369 15 199 865 17 629 6.25e-129 407
MS.gene63269.t1 MTR_2g087900 38.587 552 308 8 235 786 52 572 4.17e-128 400
MS.gene63269.t1 MTR_3g060240 34.663 652 359 14 221 865 38 629 1.44e-125 399
MS.gene63269.t1 MTR_2g087980 33.784 740 416 18 234 955 47 730 2.65e-122 390
MS.gene63269.t1 MTR_4g088225 33.512 746 421 17 220 955 50 730 1.39e-121 388
MS.gene63269.t1 MTR_4g050000 34.270 712 408 14 234 934 49 711 1.99e-121 388
MS.gene63269.t1 MTR_2g087960 33.559 739 424 18 234 955 52 740 6.84e-121 387
MS.gene63269.t1 MTR_3g060280 31.882 781 435 20 199 952 19 729 1.02e-120 386
MS.gene63269.t1 MTR_4g088225 33.516 728 411 16 220 939 50 712 1.57e-120 385
MS.gene63269.t1 MTR_2g087950 33.738 741 427 16 221 951 37 723 1.75e-120 386
MS.gene63269.t1 MTR_1g073740 32.685 771 435 18 205 956 25 730 7.64e-118 378
MS.gene63269.t1 MTR_2g087960 36.898 561 304 12 234 787 52 569 5.86e-110 352
MS.gene63269.t1 MTR_3g450800 31.601 712 399 17 241 939 5 641 1.81e-109 353
MS.gene63269.t1 MTR_3g005560 30.697 746 436 15 205 940 19 693 8.92e-108 350
MS.gene63269.t1 MTR_2g037830 30.585 752 425 16 205 939 19 690 2.77e-107 348
MS.gene63269.t1 MTR_3g060280 34.934 604 313 16 199 787 19 557 6.38e-106 342
MS.gene63269.t1 MTR_3g060280 34.647 609 318 16 199 792 19 562 9.77e-106 342
MS.gene63269.t1 MTR_0011s0020 30.924 747 431 17 205 940 19 691 1.32e-103 339
MS.gene63269.t1 MTR_2g087900 37.832 452 248 8 235 683 52 473 1.37e-95 311
MS.gene63269.t1 MTR_3g005560 31.803 610 341 11 205 810 19 557 4.18e-93 307
MS.gene63269.t1 MTR_3g060280 40.360 389 203 9 199 572 19 393 1.38e-89 294
MS.gene63269.t1 MTR_3g091270 38.074 457 194 12 271 690 92 496 1.62e-85 284
MS.gene63269.t1 MTR_2g037830 31.570 586 304 13 205 780 19 517 1.64e-84 283
MS.gene63269.t1 MTR_2g087900 43.750 304 159 5 235 538 52 343 8.39e-80 264
MS.gene63269.t1 MTR_3g005560 32.265 468 248 9 205 668 19 421 1.06e-67 233
MS.gene63269.t1 MTR_0049s0090 47.391 230 95 4 703 932 136 339 7.42e-61 212
MS.gene63269.t1 MTR_2g087900 40.930 215 116 5 235 447 52 257 1.42e-46 169
MS.gene63269.t1 MTR_8g043560 40.094 212 70 6 756 965 260 416 4.41e-36 142
MS.gene63269.t1 MTR_7g084950 63.415 82 29 1 901 981 8 89 2.03e-28 109
MS.gene63269.t1 MTR_3g436010 53.636 110 48 1 6 112 3 112 2.18e-27 112
MS.gene63269.t1 MTR_3g436010 53.636 110 48 1 6 112 3 112 8.25e-27 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63269.t1 AT5G17420 63.698 1033 316 10 1 981 1 1026 0.0 1357
MS.gene63269.t1 AT5G05170 55.577 1058 365 11 27 981 10 1065 0.0 1244
MS.gene63269.t1 AT4G32410 55.056 1068 375 15 1 966 1 1065 0.0 1195
MS.gene63269.t1 AT2G25540 53.810 1050 396 13 7 969 1 1048 0.0 1170
MS.gene63269.t1 AT5G09870 52.186 1075 413 15 1 981 1 1068 0.0 1163
MS.gene63269.t1 AT4G18780 53.320 994 393 11 37 981 9 980 0.0 1111
MS.gene63269.t1 AT5G64740 49.310 1087 441 16 1 981 1 1083 0.0 1087
MS.gene63269.t1 AT2G21770 49.174 1090 441 17 1 981 1 1086 0.0 1080
MS.gene63269.t1 AT4G39350 58.563 835 305 8 182 981 254 1082 0.0 1050
MS.gene63269.t1 AT4G39350 60.825 97 36 1 1 95 1 97 3.73e-30 129
MS.gene63269.t1 AT3G03050 41.588 1058 501 25 5 964 93 1131 0.0 792
MS.gene63269.t1 AT5G16910 41.399 1058 505 25 5 964 91 1131 0.0 787
MS.gene63269.t1 AT4G38190 40.811 1061 481 26 5 964 78 1092 0.0 769
MS.gene63269.t1 AT1G02730 42.319 1009 463 19 58 964 177 1168 0.0 768
MS.gene63269.t1 AT2G33100 45.224 869 382 16 184 964 162 1024 0.0 753
MS.gene63269.t1 AT2G33100 45.224 869 382 16 184 964 162 1024 0.0 753
MS.gene63269.t1 AT1G32180 41.497 935 417 17 133 962 57 966 0.0 712
MS.gene63269.t1 AT1G32180 41.497 935 417 17 133 962 57 966 0.0 712
MS.gene63269.t1 AT5G44030 56.620 574 224 7 37 585 23 596 0.0 690
MS.gene63269.t1 AT5G44030 59.847 391 151 5 593 981 663 1049 7.58e-163 506
MS.gene63269.t1 AT5G44030 54.726 603 219 8 37 585 23 625 0.0 682
MS.gene63269.t1 AT5G44030 59.847 391 151 5 593 981 692 1078 1.41e-162 506
MS.gene63269.t1 AT5G44030 58.128 406 162 5 578 981 371 770 5.15e-166 505
MS.gene63269.t1 AT5G44030 68.038 316 100 1 270 584 1 316 2.34e-158 486
MS.gene63269.t1 AT4G23990 32.493 754 425 17 197 936 38 721 6.76e-121 387
MS.gene63269.t1 AT4G24000 30.932 805 455 23 182 968 1 722 1.66e-118 379
MS.gene63269.t1 AT4G24010 31.258 755 437 15 197 938 19 704 6.89e-118 379
MS.gene63269.t1 AT4G15320 33.033 778 432 24 189 934 10 730 1.67e-117 378
MS.gene63269.t1 AT4G15320 33.033 778 432 24 189 934 10 730 1.81e-117 378
MS.gene63269.t1 AT2G32530 34.901 659 371 14 189 839 10 618 1.00e-116 376
MS.gene63269.t1 AT1G55850 30.689 769 444 16 198 952 26 719 2.61e-116 374
MS.gene63269.t1 AT2G32620 32.392 744 423 18 221 936 39 730 4.61e-116 374
MS.gene63269.t1 AT2G32610 31.407 796 464 23 189 955 10 752 7.85e-115 371
MS.gene63269.t1 AT4G15320 33.038 790 431 26 189 934 10 745 2.48e-114 370
MS.gene63269.t1 AT4G15290 34.439 633 366 14 233 861 50 637 3.01e-113 367
MS.gene63269.t1 AT2G32540 30.993 755 443 17 233 960 50 753 5.00e-112 363
MS.gene63269.t1 AT2G32620 34.797 592 339 13 233 820 50 598 1.14e-110 355
MS.gene63269.t1 AT2G32620 32.842 679 383 16 286 936 1 634 2.74e-107 348
MS.gene63269.t1 AT4G15320 32.511 689 354 20 189 821 10 643 5.94e-103 340
MS.gene63269.t1 AT2G32620 36.634 505 277 10 233 733 50 515 1.62e-100 326
MS.gene63269.t1 AT4G15320 31.550 729 351 23 189 821 10 686 2.67e-95 320
MS.gene63269.t1 AT4G23990 32.177 519 289 10 426 936 44 507 2.36e-81 274
MS.gene63269.t1 AT4G24000 30.853 551 309 14 426 968 44 530 1.53e-80 272

Find 204 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTCCCATTAGTCCTTTA+AGG 0.067110 8.1:-40485005 None:intergenic
CATCTTTATCCTTTCCTTAA+AGG 0.095284 8.1:+40484991 MS.gene63269:CDS
GGTGGAGAAATCAACAATTT+TGG 0.111660 8.1:+40484677 MS.gene63269:CDS
GAGAGAATATGAAGAGTTTA+AGG 0.157312 8.1:+40482314 MS.gene63269:intron
AAATACTGTTCTTTCAATTT+TGG 0.158824 8.1:+40481858 MS.gene63269:CDS
TCCAATACTGTGAGAATATA+AGG 0.173102 8.1:-40480240 None:intergenic
AGAAGCCATGTGTTTCTTTA+TGG 0.173329 8.1:+40482749 MS.gene63269:CDS
GTGACTATATTCAACATTAT+TGG 0.220024 8.1:+40484874 MS.gene63269:CDS
AAGGATACTGAAAATAAATT+TGG 0.243965 8.1:+40483387 MS.gene63269:CDS
TGTCATTTGGTCTGTGCTTT+TGG 0.246086 8.1:+40485050 MS.gene63269:CDS
TCCTTTCCTTAAAGGACTAA+TGG 0.262867 8.1:+40484999 MS.gene63269:CDS
TTCAGAAGGAAAGCTTTAAA+TGG 0.264003 8.1:+40483153 MS.gene63269:CDS
GAAGAGGATGGGAGCATTAT+AGG 0.265683 8.1:+40483243 MS.gene63269:CDS
ATGAGAGGCAATGCACTAAA+AGG 0.265917 8.1:-40484010 None:intergenic
ATTGGGGCTGTTCCCCTAAA+AGG 0.269790 8.1:-40483836 None:intergenic
TCTATTGGAGAAAGCATATT+AGG 0.270639 8.1:-40481784 None:intergenic
AACATTATTGGTATTGTTGC+TGG 0.294324 8.1:+40484886 MS.gene63269:CDS
TATTGAACAAGAATTTAAAA+TGG 0.304815 8.1:+40480139 MS.gene63269:CDS
TGCAATTGTACAAGGCCTAA+TGG 0.307482 8.1:+40484729 MS.gene63269:CDS
TCTTCATCTCCCTCCACTCT+TGG 0.309213 8.1:-40480098 None:intergenic
AGTGTGGCTTCCCTGTTTGC+AGG 0.310440 8.1:+40479731 MS.gene63269:CDS
CACCAACTCTTGTTGTCATT+TGG 0.316180 8.1:+40485037 MS.gene63269:CDS
GACTTAACCAAGTTCTTAGA+TGG 0.320378 8.1:+40483873 MS.gene63269:CDS
TCTTTAAAACCATACCATAT+TGG 0.325011 8.1:-40483935 None:intergenic
AGTCTTTCTGTAAGATTGAT+TGG 0.326570 8.1:-40483854 None:intergenic
ACGAACTGTACACCATTAGA+TGG 0.334995 8.1:+40484824 MS.gene63269:CDS
ACAAGAGGTGGTTCCTTGAT+TGG 0.346756 8.1:-40481829 None:intergenic
GTCTTTCTGTAAGATTGATT+GGG 0.353577 8.1:-40483853 None:intergenic
TTGGACAGTGGCGGCTGAAT+AGG 0.364398 8.1:-40483916 None:intergenic
CGATCGATGGGAAACCATTT+GGG 0.368399 8.1:-40481363 None:intergenic
GCGATCGATGGGAAACCATT+TGG 0.369089 8.1:-40481364 None:intergenic
TCATAGCATGGCCTGCAAAC+AGG 0.370236 8.1:-40479742 None:intergenic
GCCACAACCATCATTCTATA+AGG 0.374205 8.1:-40481210 None:intergenic
CCTTTCCTTAAAGGACTAAT+GGG 0.379340 8.1:+40485000 MS.gene63269:CDS
TCAGCCGCCACTGTCCAATA+TGG 0.389539 8.1:+40483921 MS.gene63269:CDS
GGGCCTGTTTATGTTGGATC+AGG 0.396892 8.1:+40483123 MS.gene63269:CDS
TATCAGTATCATGTGAAATC+TGG 0.398754 8.1:+40481310 MS.gene63269:CDS
CCCTTATATTCTCACAGTAT+TGG 0.398842 8.1:+40480239 MS.gene63269:CDS
GCAATTGTACAAGGCCTAAT+GGG 0.399734 8.1:+40484730 MS.gene63269:CDS
GTTGTTATAAAGATATCTAT+TGG 0.402178 8.1:-40481799 None:intergenic
TGAGATTTGATAGTCTTGAT+AGG 0.405593 8.1:+40482814 MS.gene63269:CDS
CATGAATGGGGAGCATTGAT+TGG 0.408338 8.1:+40484937 MS.gene63269:CDS
TTCTTTATGGACATTCAACT+TGG 0.409379 8.1:+40482762 MS.gene63269:CDS
CAACCTGATCCAACATAAAC+AGG 0.410475 8.1:-40483126 None:intergenic
AAATAGCGGTGAACATGAAT+GGG 0.412338 8.1:+40484924 MS.gene63269:CDS
ATGATGATGATGCAAAATAT+AGG 0.423478 8.1:+40480210 MS.gene63269:CDS
CATAATATATTGTATCGTTC+CGG 0.424683 8.1:+40484030 MS.gene63269:CDS
CAGTCCAAGTTGAGCACAAA+AGG 0.427635 8.1:-40482693 None:intergenic
GTAGACAGTGCTGTTAATAT+AGG 0.428519 8.1:-40483987 None:intergenic
AGTATGATACAAATACTTCT+TGG 0.430810 8.1:+40482441 MS.gene63269:CDS
TGAGAAGATAGACTTTCTTA+AGG 0.431779 8.1:+40482044 MS.gene63269:CDS
TCTGTAGGGCGTACAGTAGA+AGG 0.431887 8.1:+40479685 MS.gene63269:CDS
ATTGCTACTTTCCTTGATAG+TGG 0.435778 8.1:-40481168 None:intergenic
CTTCTATTCTTGAATTGAGA+TGG 0.438164 8.1:+40484632 MS.gene63269:CDS
CATCCAGTACCTGATGCAAT+TGG 0.442733 8.1:+40481276 MS.gene63269:CDS
TGTACAAGTTCACTCAAAAC+AGG 0.447611 8.1:+40483212 MS.gene63269:CDS
TAAATAGCGGTGAACATGAA+TGG 0.448788 8.1:+40484923 MS.gene63269:CDS
GCAGATCAACTTGAGGTGTC+TGG 0.451877 8.1:+40483089 MS.gene63269:intron
TTTGTGTTGTTTCCTGGCCA+TGG 0.452165 8.1:-40482408 None:intergenic
TGATACGCTTGTATCTTGTA+TGG 0.453231 8.1:-40479804 None:intergenic
AGAAGTATTTGTATCATACT+TGG 0.453336 8.1:-40482438 None:intergenic
AGTCCAATTGCATCAGGTAC+TGG 0.453883 8.1:-40481279 None:intergenic
AGGTGTCTGGATGGAATTCA+AGG 0.457810 8.1:+40483102 MS.gene63269:CDS
CCTCGTATCCCCACAGTGTC+CGG 0.460971 8.1:-40483527 None:intergenic
GTCTATTCAGCTTCGTGTAT+CGG 0.462638 8.1:+40482653 MS.gene63269:intron
AAGGTATGTCTCGCGATCGA+TGG 0.462733 8.1:-40481376 None:intergenic
CACCACATATCTCACAATCT+TGG 0.464547 8.1:-40479660 None:intergenic
GGCCTAATGGGAAGATTCCT+TGG 0.464882 8.1:+40484742 MS.gene63269:CDS
TTCCTTTCATACTCATAGCA+TGG 0.470125 8.1:-40479754 None:intergenic
TACCTGATGCAATTGGACTT+TGG 0.472918 8.1:+40481283 MS.gene63269:CDS
CCCATTAGTCCTTTAAGGAA+AGG 0.477537 8.1:-40485000 None:intergenic
CCAATACTGTGAGAATATAA+GGG 0.477764 8.1:-40480239 None:intergenic
CATCTCTTTGCAATTGTACA+AGG 0.478702 8.1:+40484721 MS.gene63269:CDS
AGGAAAGTAGCAATACCTTC+AGG 0.479655 8.1:+40481177 MS.gene63269:CDS
CTACTGCCCATCTAAGAACT+TGG 0.479808 8.1:-40483880 None:intergenic
TTAAACTCGCCATCATCGTC+TGG 0.482309 8.1:-40484802 None:intergenic
AACCAAAGTCCAATTGCATC+AGG 0.483430 8.1:-40481285 None:intergenic
CATAGCATGGCCTGCAAACA+GGG 0.483501 8.1:-40479741 None:intergenic
TTTGTGTGATGTTGAAATGC+AGG 0.486310 8.1:-40482531 None:intergenic
ACCTTGACCGCCTTTCAGTC+AGG 0.487974 8.1:+40481394 MS.gene63269:CDS
TAGTAGTACTGTCCATCTAA+TGG 0.488113 8.1:-40484836 None:intergenic
CAGGATGAAAATGAAGAGGA+TGG 0.490027 8.1:+40483231 MS.gene63269:CDS
AGGTATGTCTCGCGATCGAT+GGG 0.490485 8.1:-40481375 None:intergenic
TGATGATGATGCAAAATATA+GGG 0.492784 8.1:+40480211 MS.gene63269:CDS
AAATGGCTTTGATCCTCCTA+AGG 0.493222 8.1:+40483170 MS.gene63269:CDS
TGTTTCTTGAAGTGCTTCAA+AGG 0.493651 8.1:-40481944 None:intergenic
TTCATACTCCAACCTTCTGA+TGG 0.494377 8.1:-40482375 None:intergenic
TACCAAGGAATCTTCCCATT+AGG 0.495635 8.1:-40484744 None:intergenic
ATTGTAATGCAGGTTTGAGC+CGG 0.497856 8.1:+40481753 MS.gene63269:intron
ACTCAAAGAAGAGTAATAGA+AGG 0.500130 8.1:-40481242 None:intergenic
TTCTCAGAGAAATACTTCTC+AGG 0.500963 8.1:-40482027 None:intergenic
TATGAGTATGAAAGGAAAGA+AGG 0.503548 8.1:+40479760 MS.gene63269:CDS
TGTTAATATAGGCAATCCTT+TGG 0.504205 8.1:-40483976 None:intergenic
CTAGAAATGTAGACGAGAGA+TGG 0.505503 8.1:-40482498 None:intergenic
AAAAGAACGCCGTGCTATGA+AGG 0.506744 8.1:+40482089 MS.gene63269:CDS
ATTCCACATTGCTTAACATC+AGG 0.508229 8.1:-40485132 None:intergenic
ATTCAAGGGCCTGTTTATGT+TGG 0.508747 8.1:+40483117 MS.gene63269:CDS
ACAAGAATTTAAAATGGAAG+AGG 0.511842 8.1:+40480145 MS.gene63269:CDS
ATGAATGGGGAGCATTGATT+GGG 0.513295 8.1:+40484938 MS.gene63269:CDS
TCAAGAAGTCCTGCTTAAAG+AGG 0.515226 8.1:+40483473 MS.gene63269:CDS
CGCCACTGTCCAATATGGTA+TGG 0.517251 8.1:+40483926 MS.gene63269:CDS
ATGGAGTGGAGTTAGTCTTG+AGG 0.520262 8.1:+40484651 MS.gene63269:CDS
CAACAGGTTGGTATGAGCTA+TGG 0.520432 8.1:+40483731 MS.gene63269:intron
AGGACTTCTTGAGTTGAAGA+AGG 0.520603 8.1:-40483462 None:intergenic
AATTCTTCACTGACAGAAGA+TGG 0.520844 8.1:+40483429 MS.gene63269:CDS
CTTCTCAGGTGCTCGCGGCT+CGG 0.527752 8.1:-40482013 None:intergenic
CATGAATGGCCTCTTTAAGC+AGG 0.528536 8.1:-40483482 None:intergenic
TGAGAGGCAATGCACTAAAA+GGG 0.528680 8.1:-40484009 None:intergenic
GAGTTAGTCTTGAGGAATGG+TGG 0.529431 8.1:+40484659 MS.gene63269:CDS
TCATGTTACGTTTCTGATGA+CGG 0.530499 8.1:+40481907 MS.gene63269:CDS
ACCTGACTGAAAGGCGGTCA+AGG 0.530876 8.1:-40481395 None:intergenic
TACTTGATCAGATTCCCAAA+TGG 0.531951 8.1:+40481349 MS.gene63269:CDS
TACCAAGGCGTTCATTGCAC+CGG 0.533585 8.1:-40482556 None:intergenic
ATTCTTGAATTGAGATGGAG+TGG 0.534682 8.1:+40484637 MS.gene63269:CDS
AGATGAAGATGAAGAAGATG+TGG 0.535004 8.1:+40480112 MS.gene63269:CDS
AAAGATGAGACACCATGGCC+AGG 0.535047 8.1:+40482396 MS.gene63269:CDS
AAACTAGACAGCCACTATCA+AGG 0.537495 8.1:+40481157 MS.gene63269:CDS
GCAGCCATTGCAATTAGATA+AGG 0.538570 8.1:+40483368 MS.gene63269:CDS
GGCCATGCTATGAGTATGAA+AGG 0.544294 8.1:+40479752 MS.gene63269:CDS
TAAAGATGCATACTCGTGGT+TGG 0.547631 8.1:+40483783 MS.gene63269:CDS
ACAAGATACAAGCGTATCAA+AGG 0.549629 8.1:+40479808 MS.gene63269:CDS
ACTCAGTCCTTATAGAATGA+TGG 0.551671 8.1:+40481203 MS.gene63269:CDS
TCTTTCTGTAAGATTGATTG+GGG 0.551988 8.1:-40483852 None:intergenic
TCAGTGAGCAAGCAGACAGC+CGG 0.552176 8.1:-40484049 None:intergenic
GTAGAGAATTGTTTACAGAA+AGG 0.552263 8.1:-40481991 None:intergenic
TGAGAGTTCCATCAGAAGGT+TGG 0.553628 8.1:+40482367 MS.gene63269:CDS
TTTGTAGCTTGTGAAGAGTG+TGG 0.555087 8.1:+40479715 MS.gene63269:CDS
AGCCGGTGCAATGAACGCCT+TGG 0.555691 8.1:+40482554 MS.gene63269:CDS
AATATAGTCACTGTGGTTGG+AGG 0.557077 8.1:-40484862 None:intergenic
AAGTGCTTCAAAGGTGAGCA+TGG 0.557216 8.1:-40481935 None:intergenic
GGAGACTCAAGCTGCTCCAA+AGG 0.561108 8.1:+40483960 MS.gene63269:CDS
GATCAGGTTGTATATTCAGA+AGG 0.562306 8.1:+40483139 MS.gene63269:CDS
ACTTAACCAAGTTCTTAGAT+GGG 0.564691 8.1:+40483874 MS.gene63269:CDS
GAGATATGTGGTGATTCTGT+AGG 0.565126 8.1:+40479670 MS.gene63269:CDS
TCCTTATAGAATGATGGTTG+TGG 0.565499 8.1:+40481209 MS.gene63269:CDS
CTGTAGGGCGTACAGTAGAA+GGG 0.565548 8.1:+40479686 MS.gene63269:CDS
TCTCAATTCAAGAATAGAAG+AGG 0.566349 8.1:-40484629 None:intergenic
AGCTTCAGGACCTGACTGAA+AGG 0.568052 8.1:-40481404 None:intergenic
TGACGCGGTTGATCCAGAAA+AGG 0.568923 8.1:+40480594 MS.gene63269:CDS
AACAACCGCAGATCCAATCA+AGG 0.570577 8.1:+40481816 MS.gene63269:CDS
ATGAGTATGAAAGGAAAGAA+GGG 0.570844 8.1:+40479761 MS.gene63269:CDS
TGTATCTTGTATGGCACTGA+GGG 0.571824 8.1:-40479795 None:intergenic
CAAGTTCTTAGATGGGCAGT+AGG 0.571891 8.1:+40483881 MS.gene63269:CDS
ATCAACTTGAGGTGTCTGGA+TGG 0.574542 8.1:+40483093 MS.gene63269:CDS
TGAGTTGTAGCTACGAAGAC+CGG 0.574954 8.1:+40483508 MS.gene63269:CDS
TCGAAGGCACCAGACGATGA+TGG 0.575570 8.1:+40484793 MS.gene63269:CDS
GTATCCTTATCTAATTGCAA+TGG 0.575951 8.1:-40483372 None:intergenic
CACAATGGAGGAGACAATGA+AGG 0.576558 8.1:+40482465 MS.gene63269:CDS
TTTCAACATCACACAAAAGC+CGG 0.578563 8.1:+40482537 MS.gene63269:CDS
GCTACAACTCATGACATGAA+TGG 0.580836 8.1:-40483496 None:intergenic
GCATACTCGTGGTTGGAGAT+CGG 0.580977 8.1:+40483790 MS.gene63269:CDS
AAAGGAAGTCCAAGAGTGGA+GGG 0.583683 8.1:+40480089 MS.gene63269:intron
CAAATACTTCTTGGTCACAA+TGG 0.585710 8.1:+40482450 MS.gene63269:CDS
TCTTTATGGACATTCAACTT+GGG 0.586661 8.1:+40482763 MS.gene63269:CDS
AAATCTGGCTTGCATTGTCA+TGG 0.586979 8.1:+40481325 MS.gene63269:CDS
CTACGAAGACCGGACACTGT+GGG 0.588537 8.1:+40483518 MS.gene63269:CDS
ACATTTCAACATTGTATCGA+AGG 0.591248 8.1:+40484777 MS.gene63269:CDS
TTGAATATAGTCACTGTGGT+TGG 0.591335 8.1:-40484865 None:intergenic
TGGTGCAAAATTAGATAACA+AGG 0.595616 8.1:+40480525 MS.gene63269:CDS
AGATATGTGGTGATTCTGTA+GGG 0.598951 8.1:+40479671 MS.gene63269:CDS
TCTTAACAGCAATGAACTTG+TGG 0.601654 8.1:+40479131 MS.gene63269:CDS
AGGATGAAAATGAAGAGGAT+GGG 0.604235 8.1:+40483232 MS.gene63269:CDS
CCGGACACTGTGGGGATACG+AGG 0.604762 8.1:+40483527 MS.gene63269:CDS
TGGTTCCTTGATTGGATCTG+CGG 0.606117 8.1:-40481821 None:intergenic
GTATTTGCTGTAACAAGAGG+TGG 0.607414 8.1:-40481841 None:intergenic
AAAACAGGATGAAAATGAAG+AGG 0.608147 8.1:+40483227 MS.gene63269:CDS
GACCAAATGACAACAAGAGT+TGG 0.608552 8.1:-40485039 None:intergenic
TTGTATCTTGTATGGCACTG+AGG 0.609028 8.1:-40479796 None:intergenic
AAATACTTCTCAGGTGCTCG+CGG 0.609482 8.1:-40482018 None:intergenic
ACAGTATTTGCTGTAACAAG+AGG 0.609520 8.1:-40481844 None:intergenic
TGCAAAAGGAAGTCCAAGAG+TGG 0.611551 8.1:+40480085 MS.gene63269:intron
AAAAGGAAGTCCAAGAGTGG+AGG 0.616197 8.1:+40480088 MS.gene63269:intron
GGTGAGAATAAATGCGCTTG+TGG 0.620185 8.1:+40482335 MS.gene63269:CDS
TCTATGAGAGTTCCATCAGA+AGG 0.624008 8.1:+40482363 MS.gene63269:CDS
ATAGAATGATGGTTGTGGCA+AGG 0.625809 8.1:+40481214 MS.gene63269:CDS
ACGATACAATATATTATGAG+AGG 0.631677 8.1:-40484025 None:intergenic
TGATAAATTCATCACACCAT+CGG 0.631900 8.1:+40484069 MS.gene63269:CDS
TGATACTAACCTTCATAGCA+CGG 0.635282 8.1:-40482098 None:intergenic
ACAAGGATAAAACAGATGAG+TGG 0.639497 8.1:+40480542 MS.gene63269:CDS
GTGGAGTTAGTCTTGAGGAA+TGG 0.641187 8.1:+40484656 MS.gene63269:CDS
ATACTTCTTGGTCACAATGG+AGG 0.641421 8.1:+40482453 MS.gene63269:CDS
TTCACAGATGCTATAAATAG+CGG 0.641791 8.1:+40484910 MS.gene63269:CDS
TGTAGGGCGTACAGTAGAAG+GGG 0.643292 8.1:+40479687 MS.gene63269:CDS
ACAGATGAGTGGAAGCAGCA+AGG 0.644169 8.1:+40480553 MS.gene63269:CDS
GGGCCTGATGTTAAGCAATG+TGG 0.646332 8.1:+40485129 MS.gene63269:CDS
GGTGTCTGGATGGAATTCAA+GGG 0.646774 8.1:+40483103 MS.gene63269:CDS
GTCAATTCTTACCCAAACCA+AGG 0.652742 8.1:-40485085 None:intergenic
CTCAACATGGAAGCTAAGAG+TGG 0.655022 8.1:+40479093 None:intergenic
TTCAGGACCTGACTGAAAGG+CGG 0.662584 8.1:-40481401 None:intergenic
TAAGGACTGAGTCTTCCTGA+AGG 0.664582 8.1:-40481192 None:intergenic
GGCCAAGATTGTGAGATATG+TGG 0.665568 8.1:+40479658 MS.gene63269:CDS
AATGTGCATTAAATCTACCA+AGG 0.668204 8.1:-40484759 None:intergenic
TACGAAGACCGGACACTGTG+GGG 0.671944 8.1:+40483519 MS.gene63269:CDS
TCAAGACTATCAAATCTCAG+TGG 0.677780 8.1:-40482810 None:intergenic
AGTTTAAAGATGCATACTCG+TGG 0.684752 8.1:+40483779 MS.gene63269:CDS
GCTACGAAGACCGGACACTG+TGG 0.695611 8.1:+40483517 MS.gene63269:CDS
AACCATACCATATTGGACAG+TGG 0.697144 8.1:-40483928 None:intergenic
AATGTCCATAAAGAAACACA+TGG 0.711721 8.1:-40482754 None:intergenic
CATACCATATTGGACAGTGG+CGG 0.714328 8.1:-40483925 None:intergenic
TCTTCACTGACAGAAGATGG+TGG 0.726467 8.1:+40483432 MS.gene63269:CDS
TCTGTTGATCGAAACTGACG+CGG 0.729661 8.1:+40480579 MS.gene63269:CDS
AATAGCGGTGAACATGAATG+GGG 0.729849 8.1:+40484925 MS.gene63269:CDS
GTATGAAAGATGAGACACCA+TGG 0.730748 8.1:+40482391 MS.gene63269:CDS
AATGTTGAATATAGTCACTG+TGG 0.751089 8.1:-40484869 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTATTTTTATTATTTTT+TGG + chr8.1:40479572-40479591 MS.gene63269:intron 0.0%
!! TTAACAAAATGATAAAATAA+AGG - chr8.1:40481057-40481076 None:intergenic 10.0%
!!! ATAAATATATCTTTTTTTGA+AGG + chr8.1:40479361-40479380 MS.gene63269:intron 10.0%
!! AGCATATATAAAATAAAAAC+AGG + chr8.1:40480452-40480471 MS.gene63269:intron 15.0%
!! ATCATATACTAATACTATTA+GGG + chr8.1:40480860-40480879 MS.gene63269:intron 15.0%
!! CTACATATAAAAATAACAAA+GGG - chr8.1:40479239-40479258 None:intergenic 15.0%
!! GGATAAAATATAATCAAATT+GGG - chr8.1:40484409-40484428 None:intergenic 15.0%
!! TATTGAACAAGAATTTAAAA+TGG + chr8.1:40480139-40480158 MS.gene63269:CDS 15.0%
!! TGTATTCATAACAATTTATA+TGG - chr8.1:40483701-40483720 None:intergenic 15.0%
!! TTCAGCTTAATTAAATTTAT+AGG - chr8.1:40480287-40480306 None:intergenic 15.0%
!!! AAATAAAATAGTGTTTTTGT+TGG - chr8.1:40482853-40482872 None:intergenic 15.0%
!!! ATTTTTATATGTAGCATATT+AGG + chr8.1:40479245-40479264 MS.gene63269:intron 15.0%
!!! TTTTTATATGTAGCATATTA+GGG + chr8.1:40479246-40479265 MS.gene63269:intron 15.0%
!! AATTGAAATGTAAATTACCA+AGG - chr8.1:40482574-40482593 None:intergenic 20.0%
!! AGTTAACAATAAGAGATTAA+GGG - chr8.1:40484514-40484533 None:intergenic 20.0%
!! AGTTTAAATATACACCTAAA+AGG - chr8.1:40483672-40483691 None:intergenic 20.0%
!! ATTATTAATATAAGCTCTTC+AGG + chr8.1:40480988-40481007 MS.gene63269:intron 20.0%
!! ATTTCAAATTGCAAATTAAG+AGG - chr8.1:40480357-40480376 None:intergenic 20.0%
!! CATCATATACTAATACTATT+AGG + chr8.1:40480859-40480878 MS.gene63269:intron 20.0%
!! GCTACATATAAAAATAACAA+AGG - chr8.1:40479240-40479259 None:intergenic 20.0%
!! GGGATAAAATATAATCAAAT+TGG - chr8.1:40484410-40484429 None:intergenic 20.0%
!! GGTCTAAATTAATATATGTA+TGG - chr8.1:40479182-40479201 None:intergenic 20.0%
!! GTTGTTATAAAGATATCTAT+TGG - chr8.1:40481802-40481821 None:intergenic 20.0%
!! GTTTACAAATAATATTGTTC+AGG + chr8.1:40484555-40484574 MS.gene63269:intron 20.0%
!! TAAAAATTATACATGCATGA+TGG + chr8.1:40484135-40484154 MS.gene63269:intron 20.0%
!! TAGTTAACAATAAGAGATTA+AGG - chr8.1:40484515-40484534 None:intergenic 20.0%
!! TATTGTCAAGAAGAAAATTA+GGG - chr8.1:40480409-40480428 None:intergenic 20.0%
!! TGAAAGTTAATATAACAAAG+TGG + chr8.1:40484196-40484215 MS.gene63269:intron 20.0%
!! TGAAATTATGAATTACATCA+AGG + chr8.1:40481583-40481602 MS.gene63269:intron 20.0%
!! TTATTAATATAAGCTCTTCA+GGG + chr8.1:40480989-40481008 MS.gene63269:intron 20.0%
!! TTATTGTCAAGAAGAAAATT+AGG - chr8.1:40480410-40480429 None:intergenic 20.0%
!! TTTCAAATTGCAAATTAAGA+GGG - chr8.1:40480356-40480375 None:intergenic 20.0%
!! TTTGTAAACACAATGAATAA+TGG - chr8.1:40484544-40484563 None:intergenic 20.0%
!!! AAATACTGTTCTTTCAATTT+TGG + chr8.1:40481858-40481877 MS.gene63269:CDS 20.0%
!!! AATTATCCATCTATTTTATG+AGG + chr8.1:40480374-40480393 MS.gene63269:intron 20.0%
!!! ACAGTTATTTGAAATCAATT+TGG - chr8.1:40482222-40482241 None:intergenic 20.0%
!!! ATAAGCTATTTCTATAACAA+GGG - chr8.1:40484430-40484449 None:intergenic 20.0%
!!! ATGTTATTTGAACATCAATT+TGG + chr8.1:40482143-40482162 MS.gene63269:intron 20.0%
!!! GAATTTGACAACTTTTTAAA+TGG - chr8.1:40482192-40482211 None:intergenic 20.0%
!!! TGTTATTTGAACATCAATTT+GGG + chr8.1:40482144-40482163 MS.gene63269:intron 20.0%
! AACTTTCACAACTATTGTTT+CGG + chr8.1:40481658-40481677 MS.gene63269:intron 25.0%
! AATATAACAAAGTGGTATCA+TGG + chr8.1:40484204-40484223 MS.gene63269:intron 25.0%
! AATTTCAACAACACTTTGAA+TGG + chr8.1:40483597-40483616 MS.gene63269:intron 25.0%
! ACAAATAATATTGTTCAGGT+AGG + chr8.1:40484559-40484578 MS.gene63269:intron 25.0%
! ACGATACAATATATTATGAG+AGG - chr8.1:40484028-40484047 None:intergenic 25.0%
! AGTATGATACAAATACTTCT+TGG + chr8.1:40482441-40482460 MS.gene63269:CDS 25.0%
! ATGTCATACATCATGAAATT+AGG + chr8.1:40480627-40480646 MS.gene63269:intron 25.0%
! CATAATATATTGTATCGTTC+CGG + chr8.1:40484030-40484049 MS.gene63269:CDS 25.0%
! CATTCACACAAATACAATTA+AGG - chr8.1:40483027-40483046 None:intergenic 25.0%
! CTTAATTGTATTTGTGTGAA+TGG + chr8.1:40483025-40483044 MS.gene63269:intron 25.0%
! GTGACAATGTATAAAATAGA+AGG - chr8.1:40484105-40484124 None:intergenic 25.0%
! GTGACTATATTCAACATTAT+TGG + chr8.1:40484874-40484893 MS.gene63269:CDS 25.0%
! TAACAAAGGGCTTATAAAAA+AGG - chr8.1:40479226-40479245 None:intergenic 25.0%
! TGATACAATAATAACACATG+TGG + chr8.1:40479910-40479929 MS.gene63269:intron 25.0%
! TGTTCATTATATTTCGTGTA+TGG + chr8.1:40479313-40479332 MS.gene63269:intron 25.0%
!! ACAAGAATTTAAAATGGAAG+AGG + chr8.1:40480145-40480164 MS.gene63269:CDS 25.0%
!! ATGATGATGATGCAAAATAT+AGG + chr8.1:40480210-40480229 MS.gene63269:CDS 25.0%
!! ATGTAGGTATAATTAACTTG+TGG - chr8.1:40479203-40479222 None:intergenic 25.0%
!! GAAATTGTTCTTTTCTTCAT+GGG + chr8.1:40484960-40484979 MS.gene63269:CDS 25.0%
!! TGATGATGATGCAAAATATA+GGG + chr8.1:40480211-40480230 MS.gene63269:CDS 25.0%
!!! AGAAGTATTTGTATCATACT+TGG - chr8.1:40482441-40482460 None:intergenic 25.0%
!!! ATATGGTATGGTTTTAAAGA+AGG + chr8.1:40483938-40483957 MS.gene63269:CDS 25.0%
!!! CATAAGCTATTTCTATAACA+AGG - chr8.1:40484431-40484450 None:intergenic 25.0%
!!! TAACATGAAATTTTGTTTGC+AGG - chr8.1:40481895-40481914 None:intergenic 25.0%
!!! TATGGTATGGTTTTAAAGAA+GGG + chr8.1:40483939-40483958 MS.gene63269:CDS 25.0%
!!! TCTTTAAAACCATACCATAT+TGG - chr8.1:40483938-40483957 None:intergenic 25.0%
AAAACAGGATGAAAATGAAG+AGG + chr8.1:40483227-40483246 MS.gene63269:CDS 30.0%
AACATTATTGGTATTGTTGC+TGG + chr8.1:40484886-40484905 MS.gene63269:CDS 30.0%
AATGTCCATAAAGAAACACA+TGG - chr8.1:40482757-40482776 None:intergenic 30.0%
AATGTGCATTAAATCTACCA+AGG - chr8.1:40484762-40484781 None:intergenic 30.0%
AATGTTGAATATAGTCACTG+TGG - chr8.1:40484872-40484891 None:intergenic 30.0%
AATTCAAAGCCAATCTATGT+AGG - chr8.1:40480886-40480905 None:intergenic 30.0%
ACATTTCAACATTGTATCGA+AGG + chr8.1:40484777-40484796 MS.gene63269:CDS 30.0%
ACTCAAAGAAGAGTAATAGA+AGG - chr8.1:40481245-40481264 None:intergenic 30.0%
ACTTAACCAAGTTCTTAGAT+GGG + chr8.1:40483874-40483893 MS.gene63269:CDS 30.0%
AGATGTTTCATAAGTTGTCT+CGG - chr8.1:40480766-40480785 None:intergenic 30.0%
AGTCTTTCTGTAAGATTGAT+TGG - chr8.1:40483857-40483876 None:intergenic 30.0%
ATGAGAGTAAAATAAGCTTC+AGG - chr8.1:40481421-40481440 None:intergenic 30.0%
ATGAGTATGAAAGGAAAGAA+GGG + chr8.1:40479761-40479780 MS.gene63269:CDS 30.0%
CATCTTTATCCTTTCCTTAA+AGG + chr8.1:40484991-40485010 MS.gene63269:CDS 30.0%
CCAATACTGTGAGAATATAA+GGG - chr8.1:40480242-40480261 None:intergenic 30.0%
CTTCTATTCTTGAATTGAGA+TGG + chr8.1:40484632-40484651 MS.gene63269:CDS 30.0%
GAGAGAATATGAAGAGTTTA+AGG + chr8.1:40482314-40482333 MS.gene63269:intron 30.0%
GAGGTTATAAAAACAGCTTA+TGG + chr8.1:40480943-40480962 MS.gene63269:intron 30.0%
GCGGAAAAACAAAATAGAAA+GGG - chr8.1:40483071-40483090 None:intergenic 30.0%
GTAGAGAATTGTTTACAGAA+AGG - chr8.1:40481994-40482013 None:intergenic 30.0%
GTATCCTTATCTAATTGCAA+TGG - chr8.1:40483375-40483394 None:intergenic 30.0%
GTCTTTCTGTAAGATTGATT+GGG - chr8.1:40483856-40483875 None:intergenic 30.0%
TAACATATATTGATGCATGC+AGG + chr8.1:40481127-40481146 MS.gene63269:intron 30.0%
TAAGAGATTAAGGGACTATT+TGG - chr8.1:40484505-40484524 None:intergenic 30.0%
TATCAGTATCATGTGAAATC+TGG + chr8.1:40481310-40481329 MS.gene63269:CDS 30.0%
TATGAGTATGAAAGGAAAGA+AGG + chr8.1:40479760-40479779 MS.gene63269:CDS 30.0%
TCCAATACTGTGAGAATATA+AGG - chr8.1:40480243-40480262 None:intergenic 30.0%
TCTATCACACATAGTAATAG+AGG - chr8.1:40481521-40481540 None:intergenic 30.0%
TCTCAATTCAAGAATAGAAG+AGG - chr8.1:40484632-40484651 None:intergenic 30.0%
TCTCTCTGTTAGAAAAGTAA+GGG - chr8.1:40482300-40482319 None:intergenic 30.0%
TCTTTATGGACATTCAACTT+GGG + chr8.1:40482763-40482782 MS.gene63269:CDS 30.0%
TCTTTCTGTAAGATTGATTG+GGG - chr8.1:40483855-40483874 None:intergenic 30.0%
TGACACTGAAATCTAAAAAC+TGG - chr8.1:40482959-40482978 None:intergenic 30.0%
TGAGAAGATAGACTTTCTTA+AGG + chr8.1:40482044-40482063 MS.gene63269:CDS 30.0%
TGATAAATTCATCACACCAT+CGG + chr8.1:40484069-40484088 MS.gene63269:CDS 30.0%
TGATGTATGACATACATACA+TGG - chr8.1:40480620-40480639 None:intergenic 30.0%
TGCGGAAAAACAAAATAGAA+AGG - chr8.1:40483072-40483091 None:intergenic 30.0%
TGGTGCAAAATTAGATAACA+AGG + chr8.1:40480525-40480544 MS.gene63269:CDS 30.0%
TGTTAATATAGGCAATCCTT+TGG - chr8.1:40483979-40483998 None:intergenic 30.0%
TTCACAGATGCTATAAATAG+CGG + chr8.1:40484910-40484929 MS.gene63269:CDS 30.0%
TTCTCTCTGTTAGAAAAGTA+AGG - chr8.1:40482301-40482320 None:intergenic 30.0%
TTCTTTATGGACATTCAACT+TGG + chr8.1:40482762-40482781 MS.gene63269:CDS 30.0%
! ATTACATCAAGGAGTACATA+AGG + chr8.1:40481594-40481613 MS.gene63269:intron 30.0%
! CCTTTTGTGTTGAAAACTAA+GGG + chr8.1:40485108-40485127 MS.gene63269:CDS 30.0%
! CTTTTGTGTTGAAAACTAAG+GGG + chr8.1:40485109-40485128 MS.gene63269:CDS 30.0%
! GGAAATTGTTCTTTTCTTCA+TGG + chr8.1:40484959-40484978 MS.gene63269:CDS 30.0%
! GTGGAGAAATCAACAATTTT+GGG + chr8.1:40484678-40484697 MS.gene63269:CDS 30.0%
! TCTATTGGAGAAAGCATATT+AGG - chr8.1:40481787-40481806 None:intergenic 30.0%
! TGAGATTTGATAGTCTTGAT+AGG + chr8.1:40482814-40482833 MS.gene63269:CDS 30.0%
! TTCAGTGTCATTATTGTGTA+TGG + chr8.1:40482969-40482988 MS.gene63269:intron 30.0%
! TTCTATCTTTTCCTTGGTTT+GGG + chr8.1:40485074-40485093 MS.gene63269:CDS 30.0%
!! AATCAACAATTTTGGGTCAT+TGG + chr8.1:40484685-40484704 MS.gene63269:CDS 30.0%
!! ATTTTTGTTTATGCAGCCTA+AGG + chr8.1:40479618-40479637 MS.gene63269:intron 30.0%
!! CCTTAGTTTTCAACACAAAA+GGG - chr8.1:40485110-40485129 None:intergenic 30.0%
!! GTTATTTCTTCTCATGCAAA+AGG + chr8.1:40480071-40480090 MS.gene63269:intron 30.0%
!! TTCAGAAGGAAAGCTTTAAA+TGG + chr8.1:40483153-40483172 MS.gene63269:CDS 30.0%
!!! AATACACTTTTTCCATCAAC+AGG + chr8.1:40483715-40483734 MS.gene63269:intron 30.0%
!!! GGTTTACCTCATTTTGTTTT+TGG - chr8.1:40479161-40479180 None:intergenic 30.0%
!!! TTTTCTAGAGTAAAAGACAC+CGG - chr8.1:40480689-40480708 None:intergenic 30.0%
AAATAGCGGTGAACATGAAT+GGG + chr8.1:40484924-40484943 MS.gene63269:CDS 35.0%
AAGTTTGACATCGTAACCTT+AGG - chr8.1:40481703-40481722 None:intergenic 35.0%
AATTCTTCACTGACAGAAGA+TGG + chr8.1:40483429-40483448 MS.gene63269:CDS 35.0%
ACAAGATACAAGCGTATCAA+AGG + chr8.1:40479808-40479827 MS.gene63269:CDS 35.0%
ACAAGGATAAAACAGATGAG+TGG + chr8.1:40480542-40480561 MS.gene63269:CDS 35.0%
ACTCAGTCCTTATAGAATGA+TGG + chr8.1:40481203-40481222 MS.gene63269:CDS 35.0%
AGAAGCCATGTGTTTCTTTA+TGG + chr8.1:40482749-40482768 MS.gene63269:CDS 35.0%
AGAAGGAAATTGATTACCGA+TGG - chr8.1:40484088-40484107 None:intergenic 35.0%
AGATATGTGGTGATTCTGTA+GGG + chr8.1:40479671-40479690 MS.gene63269:CDS 35.0%
AGATGAAGATGAAGAAGATG+TGG + chr8.1:40480112-40480131 MS.gene63269:CDS 35.0%
AGCTGAATTTGCGCAAAAAT+GGG + chr8.1:40481966-40481985 MS.gene63269:CDS 35.0%
AGGATGAAAATGAAGAGGAT+GGG + chr8.1:40483232-40483251 MS.gene63269:CDS 35.0%
AGTTTAAAGATGCATACTCG+TGG + chr8.1:40483779-40483798 MS.gene63269:CDS 35.0%
ATAAGGCTTGTATAGTCAAC+TGG + chr8.1:40481611-40481630 MS.gene63269:intron 35.0%
ATTCCACATTGCTTAACATC+AGG - chr8.1:40485135-40485154 None:intergenic 35.0%
ATTCTTGAATTGAGATGGAG+TGG + chr8.1:40484637-40484656 MS.gene63269:CDS 35.0%
CAAATACTTCTTGGTCACAA+TGG + chr8.1:40482450-40482469 MS.gene63269:CDS 35.0%
CATCTCTTTGCAATTGTACA+AGG + chr8.1:40484721-40484740 MS.gene63269:CDS 35.0%
CCCTTATATTCTCACAGTAT+TGG + chr8.1:40480239-40480258 MS.gene63269:CDS 35.0%
CCTTTCCTTAAAGGACTAAT+GGG + chr8.1:40485000-40485019 MS.gene63269:CDS 35.0%
CTAATGACATAAGCACTTGT+GGG + chr8.1:40480909-40480928 MS.gene63269:intron 35.0%
CTCTCTGTTAGAAAAGTAAG+GGG - chr8.1:40482299-40482318 None:intergenic 35.0%
CTCTTAACAACGATATATGC+CGG + chr8.1:40480667-40480686 MS.gene63269:intron 35.0%
CTGCTTCCTCATAAAATAGA+TGG - chr8.1:40480383-40480402 None:intergenic 35.0%
GACTTAACCAAGTTCTTAGA+TGG + chr8.1:40483873-40483892 MS.gene63269:CDS 35.0%
GGGCTTATAAAAAAGGATGT+AGG - chr8.1:40479219-40479238 None:intergenic 35.0%
GGTCATCCAAAAACAAAATG+AGG + chr8.1:40479152-40479171 MS.gene63269:CDS 35.0%
GTGGCAAATGATTTAAACTG+TGG - chr8.1:40482886-40482905 None:intergenic 35.0%
TAAATAGCGGTGAACATGAA+TGG + chr8.1:40484923-40484942 MS.gene63269:CDS 35.0%
TACTTGATCAGATTCCCAAA+TGG + chr8.1:40481349-40481368 MS.gene63269:CDS 35.0%
TAGTAGTACTGTCCATCTAA+TGG - chr8.1:40484839-40484858 None:intergenic 35.0%
TCAAGACTATCAAATCTCAG+TGG - chr8.1:40482813-40482832 None:intergenic 35.0%
TCATGTTACGTTTCTGATGA+CGG + chr8.1:40481907-40481926 MS.gene63269:CDS 35.0%
TCCTTATAGAATGATGGTTG+TGG + chr8.1:40481209-40481228 MS.gene63269:CDS 35.0%
TCCTTTCCTTAAAGGACTAA+TGG + chr8.1:40484999-40485018 MS.gene63269:CDS 35.0%
TCTAATGACATAAGCACTTG+TGG + chr8.1:40480908-40480927 MS.gene63269:intron 35.0%
TCTTAACAGCAATGAACTTG+TGG + chr8.1:40479131-40479150 MS.gene63269:CDS 35.0%
TGATACGCTTGTATCTTGTA+TGG - chr8.1:40479807-40479826 None:intergenic 35.0%
TGATACTAACCTTCATAGCA+CGG - chr8.1:40482101-40482120 None:intergenic 35.0%
TGTACAAGTTCACTCAAAAC+AGG + chr8.1:40483212-40483231 MS.gene63269:CDS 35.0%
TTCACAACTATTGTTTCGGA+GGG + chr8.1:40481662-40481681 MS.gene63269:intron 35.0%
TTCCTTTCATACTCATAGCA+TGG - chr8.1:40479757-40479776 None:intergenic 35.0%
TTCTCAGAGAAATACTTCTC+AGG - chr8.1:40482030-40482049 None:intergenic 35.0%
TTGAATATAGTCACTGTGGT+TGG - chr8.1:40484868-40484887 None:intergenic 35.0%
TTTCAACATCACACAAAAGC+CGG + chr8.1:40482537-40482556 MS.gene63269:CDS 35.0%
TTTCACAACTATTGTTTCGG+AGG + chr8.1:40481661-40481680 MS.gene63269:intron 35.0%
TTTGATCTTCATGAAGCAGA+TGG + chr8.1:40480505-40480524 MS.gene63269:intron 35.0%
TTTGTGTGATGTTGAAATGC+AGG - chr8.1:40482534-40482553 None:intergenic 35.0%
! CCCTTTTGTGTTGAAAACTA+AGG + chr8.1:40485107-40485126 MS.gene63269:CDS 35.0%
! CTTCTATCTTTTCCTTGGTT+TGG + chr8.1:40485073-40485092 MS.gene63269:CDS 35.0%
! GATCAGGTTGTATATTCAGA+AGG + chr8.1:40483139-40483158 MS.gene63269:CDS 35.0%
! GGTGGAGAAATCAACAATTT+TGG + chr8.1:40484677-40484696 MS.gene63269:CDS 35.0%
! GTAGACAGTGCTGTTAATAT+AGG - chr8.1:40483990-40484009 None:intergenic 35.0%
! TACGTGTCTTAAGACCTTTT+AGG + chr8.1:40483655-40483674 MS.gene63269:intron 35.0%
! TGTTTCTTGAAGTGCTTCAA+AGG - chr8.1:40481947-40481966 None:intergenic 35.0%
!! ACAGTATTTGCTGTAACAAG+AGG - chr8.1:40481847-40481866 None:intergenic 35.0%
!! AGCATATTAGGCTTGTTTTC+CGG - chr8.1:40481775-40481794 None:intergenic 35.0%
!! ATTGCTACTTTCCTTGATAG+TGG - chr8.1:40481171-40481190 None:intergenic 35.0%
!! ATTTACTTTTCGCTTATCCG+TGG - chr8.1:40481546-40481565 None:intergenic 35.0%
!! CATGCATGATGGATTCAATA+AGG + chr8.1:40484146-40484165 MS.gene63269:intron 35.0%
!! CCCTTAGTTTTCAACACAAA+AGG - chr8.1:40485111-40485130 None:intergenic 35.0%
!! TTTGGCTTCTATCTTTTCCT+TGG + chr8.1:40485068-40485087 MS.gene63269:CDS 35.0%
!!! TGATCTTTTGTGTTGTTTCC+TGG - chr8.1:40482417-40482436 None:intergenic 35.0%
AAACTAGACAGCCACTATCA+AGG + chr8.1:40481157-40481176 MS.gene63269:CDS 40.0%
AACCAAAGTCCAATTGCATC+AGG - chr8.1:40481288-40481307 None:intergenic 40.0%
AACCATACCATATTGGACAG+TGG - chr8.1:40483931-40483950 None:intergenic 40.0%
AAGGCAGTGAAAAACTTGGA+TGG + chr8.1:40479637-40479656 MS.gene63269:CDS 40.0%
AATAGCGGTGAACATGAATG+GGG + chr8.1:40484925-40484944 MS.gene63269:CDS 40.0%
AATATAGTCACTGTGGTTGG+AGG - chr8.1:40484865-40484884 None:intergenic 40.0%
ACGAACTGTACACCATTAGA+TGG + chr8.1:40484824-40484843 MS.gene63269:CDS 40.0%
ACTACTCATAAGTACTTGCG+AGG + chr8.1:40484270-40484289 MS.gene63269:intron 40.0%
ACTATGTGTGATAGAAGCCA+CGG + chr8.1:40481526-40481545 MS.gene63269:intron 40.0%
AGGAAAGTAGCAATACCTTC+AGG + chr8.1:40481177-40481196 MS.gene63269:CDS 40.0%
ATACTTCTTGGTCACAATGG+AGG + chr8.1:40482453-40482472 MS.gene63269:CDS 40.0%
ATAGAATGATGGTTGTGGCA+AGG + chr8.1:40481214-40481233 MS.gene63269:CDS 40.0%
ATGAGAGGCAATGCACTAAA+AGG - chr8.1:40484013-40484032 None:intergenic 40.0%
ATGTAACCACATAACACGTC+AGG - chr8.1:40482908-40482927 None:intergenic 40.0%
ATTCAAGGGCCTGTTTATGT+TGG + chr8.1:40483117-40483136 MS.gene63269:CDS 40.0%
ATTGTAATGCAGGTTTGAGC+CGG + chr8.1:40481753-40481772 MS.gene63269:intron 40.0%
CAACCTGATCCAACATAAAC+AGG - chr8.1:40483129-40483148 None:intergenic 40.0%
CACCACATATCTCACAATCT+TGG - chr8.1:40479663-40479682 None:intergenic 40.0%
CAGCTGAATTTGCGCAAAAA+TGG + chr8.1:40481965-40481984 MS.gene63269:CDS 40.0%
CAGGATGAAAATGAAGAGGA+TGG + chr8.1:40483231-40483250 MS.gene63269:CDS 40.0%
CTAGAAATGTAGACGAGAGA+TGG - chr8.1:40482501-40482520 None:intergenic 40.0%
CTATTAGGGCCTACATAGAT+TGG + chr8.1:40480874-40480893 MS.gene63269:intron 40.0%
CTGGCAACAGTTTAAGCAAA+TGG - chr8.1:40482940-40482959 None:intergenic 40.0%
GACCAAATGACAACAAGAGT+TGG - chr8.1:40485042-40485061 None:intergenic 40.0%
GAGATATGTGGTGATTCTGT+AGG + chr8.1:40479670-40479689 MS.gene63269:CDS 40.0%
GCAATTGTACAAGGCCTAAT+GGG + chr8.1:40484730-40484749 MS.gene63269:CDS 40.0%
GCAGCCATTGCAATTAGATA+AGG + chr8.1:40483368-40483387 MS.gene63269:CDS 40.0%
GCATTACAATTAAGTCCAGC+TGG - chr8.1:40481743-40481762 None:intergenic 40.0%
GCCACAACCATCATTCTATA+AGG - chr8.1:40481213-40481232 None:intergenic 40.0%
GCTACAACTCATGACATGAA+TGG - chr8.1:40483499-40483518 None:intergenic 40.0%
GCTGGACTTAATTGTAATGC+AGG + chr8.1:40481743-40481762 MS.gene63269:intron 40.0%
GTATGAAAGATGAGACACCA+TGG + chr8.1:40482391-40482410 MS.gene63269:CDS 40.0%
GTCAATTCTTACCCAAACCA+AGG - chr8.1:40485088-40485107 None:intergenic 40.0%
GTCTATTCAGCTTCGTGTAT+CGG + chr8.1:40482653-40482672 MS.gene63269:intron 40.0%
GTCTTCCCATTAGTCCTTTA+AGG - chr8.1:40485008-40485027 None:intergenic 40.0%
TAAAGATGCATACTCGTGGT+TGG + chr8.1:40483783-40483802 MS.gene63269:CDS 40.0%
TAAGCACTTGTGGGACTATT+TGG + chr8.1:40480918-40480937 MS.gene63269:intron 40.0%
TAAGTACTTGCGAGGTTGTT+TGG + chr8.1:40484278-40484297 MS.gene63269:intron 40.0%
TACCAAGGAATCTTCCCATT+AGG - chr8.1:40484747-40484766 None:intergenic 40.0%
TACCTGATGCAATTGGACTT+TGG + chr8.1:40481283-40481302 MS.gene63269:CDS 40.0%
TCAAGAAGTCCTGCTTAAAG+AGG + chr8.1:40483473-40483492 MS.gene63269:CDS 40.0%
TCACAACTATTGTTTCGGAG+GGG + chr8.1:40481663-40481682 MS.gene63269:intron 40.0%
TCTATGAGAGTTCCATCAGA+AGG + chr8.1:40482363-40482382 MS.gene63269:CDS 40.0%
TGAGAGGCAATGCACTAAAA+GGG - chr8.1:40484012-40484031 None:intergenic 40.0%
TGCAATTGTACAAGGCCTAA+TGG + chr8.1:40484729-40484748 MS.gene63269:CDS 40.0%
TTCATACTCCAACCTTCTGA+TGG - chr8.1:40482378-40482397 None:intergenic 40.0%
TTGTATCTTGTATGGCACTG+AGG - chr8.1:40479799-40479818 None:intergenic 40.0%
! AAATCTGGCTTGCATTGTCA+TGG + chr8.1:40481325-40481344 MS.gene63269:CDS 40.0%
! CACCAACTCTTGTTGTCATT+TGG + chr8.1:40485037-40485056 MS.gene63269:CDS 40.0%
! CATACATACATGGCCTTTTC+TGG - chr8.1:40480610-40480629 None:intergenic 40.0%
! CCCATTAGTCCTTTAAGGAA+AGG - chr8.1:40485003-40485022 None:intergenic 40.0%
! CGGCGTTCTTTTACATATGT+CGG - chr8.1:40482081-40482100 None:intergenic 40.0%
! CTAAGAGTGGTCTTTTTGCA+GGG + chr8.1:40479106-40479125 MS.gene63269:CDS 40.0%
! TCCAAGTTTTTCACTGCCTT+AGG - chr8.1:40479637-40479656 None:intergenic 40.0%
! TGTATCTTGTATGGCACTGA+GGG - chr8.1:40479798-40479817 None:intergenic 40.0%
! TTTGTAGCTTGTGAAGAGTG+TGG + chr8.1:40479715-40479734 MS.gene63269:CDS 40.0%
! TTTTTCCGCAGATCAACTTG+AGG + chr8.1:40483082-40483101 MS.gene63269:intron 40.0%
!! AAATGGCTTTGATCCTCCTA+AGG + chr8.1:40483170-40483189 MS.gene63269:CDS 40.0%
!! AACTGGCTCGTATAACTAAC+TGG + chr8.1:40481628-40481647 MS.gene63269:intron 40.0%
!! AGGACTTCTTGAGTTGAAGA+AGG - chr8.1:40483465-40483484 None:intergenic 40.0%
!! ATGAATGGGGAGCATTGATT+GGG + chr8.1:40484938-40484957 MS.gene63269:CDS 40.0%
!! GTATTTGCTGTAACAAGAGG+TGG - chr8.1:40481844-40481863 None:intergenic 40.0%
!! TGTCATTTGGTCTGTGCTTT+TGG + chr8.1:40485050-40485069 MS.gene63269:CDS 40.0%
!!! CACTTTTTCCATCAACAGGT+TGG + chr8.1:40483719-40483738 MS.gene63269:intron 40.0%
AAAAGAACGCCGTGCTATGA+AGG + chr8.1:40482089-40482108 MS.gene63269:CDS 45.0%
AAAAGGAAGTCCAAGAGTGG+AGG + chr8.1:40480088-40480107 MS.gene63269:intron 45.0%
AAAGGAAGTCCAAGAGTGGA+GGG + chr8.1:40480089-40480108 MS.gene63269:intron 45.0%
AAATACTTCTCAGGTGCTCG+CGG - chr8.1:40482021-40482040 None:intergenic 45.0%
AACAACCGCAGATCCAATCA+AGG + chr8.1:40481816-40481835 MS.gene63269:CDS 45.0%
AAGTGCTTCAAAGGTGAGCA+TGG - chr8.1:40481938-40481957 None:intergenic 45.0%
ACAAGAGGTGGTTCCTTGAT+TGG - chr8.1:40481832-40481851 None:intergenic 45.0%
ACAGCTTATGGCACGTCTAT+AGG + chr8.1:40480955-40480974 MS.gene63269:intron 45.0%
AGCTCATACCAACCTGTTGA+TGG - chr8.1:40483730-40483749 None:intergenic 45.0%
AGGTGTCTGGATGGAATTCA+AGG + chr8.1:40483102-40483121 MS.gene63269:CDS 45.0%
AGTCCAATTGCATCAGGTAC+TGG - chr8.1:40481282-40481301 None:intergenic 45.0%
CAAGTTCTTAGATGGGCAGT+AGG + chr8.1:40483881-40483900 MS.gene63269:CDS 45.0%
CACAATGGAGGAGACAATGA+AGG + chr8.1:40482465-40482484 MS.gene63269:CDS 45.0%
CATACCATATTGGACAGTGG+CGG - chr8.1:40483928-40483947 None:intergenic 45.0%
CATCCAGTACCTGATGCAAT+TGG + chr8.1:40481276-40481295 MS.gene63269:CDS 45.0%
CATGAATGGCCTCTTTAAGC+AGG - chr8.1:40483485-40483504 None:intergenic 45.0%
CGATCGATGGGAAACCATTT+GGG - chr8.1:40481366-40481385 None:intergenic 45.0%
CTACTGCCCATCTAAGAACT+TGG - chr8.1:40483883-40483902 None:intergenic 45.0%
CTTGTGGGACTATTTGGAAG+AGG + chr8.1:40480924-40480943 MS.gene63269:intron 45.0%
GCCTAAGGCAGTGAAAAACT+TGG + chr8.1:40479633-40479652 MS.gene63269:intron 45.0%
GGATTTGAACTCGACTCCTA+AGG + chr8.1:40481684-40481703 MS.gene63269:intron 45.0%
GGCCAAGATTGTGAGATATG+TGG + chr8.1:40479658-40479677 MS.gene63269:CDS 45.0%
GGCCATGCTATGAGTATGAA+AGG + chr8.1:40479752-40479771 MS.gene63269:CDS 45.0%
GGTGAGAATAAATGCGCTTG+TGG + chr8.1:40482335-40482354 MS.gene63269:CDS 45.0%
GGTGTCTGGATGGAATTCAA+GGG + chr8.1:40483103-40483122 MS.gene63269:CDS 45.0%
TAACCACATAACACGTCAGG+TGG - chr8.1:40482905-40482924 None:intergenic 45.0%
TAAGGACTGAGTCTTCCTGA+AGG - chr8.1:40481195-40481214 None:intergenic 45.0%
TCTGTTGATCGAAACTGACG+CGG + chr8.1:40480579-40480598 MS.gene63269:CDS 45.0%
TCTTCACTGACAGAAGATGG+TGG + chr8.1:40483432-40483451 MS.gene63269:CDS 45.0%
TGAGAGTTCCATCAGAAGGT+TGG + chr8.1:40482367-40482386 MS.gene63269:CDS 45.0%
TGAGTTGTAGCTACGAAGAC+CGG + chr8.1:40483508-40483527 MS.gene63269:CDS 45.0%
TGCAAAAGGAAGTCCAAGAG+TGG + chr8.1:40480085-40480104 MS.gene63269:intron 45.0%
TGGTATCATGGCATGATGCA+TGG + chr8.1:40484216-40484235 MS.gene63269:intron 45.0%
TGGTTCCTTGATTGGATCTG+CGG - chr8.1:40481824-40481843 None:intergenic 45.0%
TGTTTGTGTCCGTGCTTCAT+AGG + chr8.1:40482998-40483017 MS.gene63269:intron 45.0%
TTAAACTCGCCATCATCGTC+TGG - chr8.1:40484805-40484824 None:intergenic 45.0%
! AGCATTGAACTGATACCAGC+TGG + chr8.1:40481725-40481744 MS.gene63269:intron 45.0%
! ATCAACTTGAGGTGTCTGGA+TGG + chr8.1:40483093-40483112 MS.gene63269:CDS 45.0%
! CAGTCCAAGTTGAGCACAAA+AGG - chr8.1:40482696-40482715 None:intergenic 45.0%
! CCCCTAAAAGGAGCTCTTTT+CGG - chr8.1:40483827-40483846 None:intergenic 45.0%
! CCGAAAAGAGCTCCTTTTAG+GGG + chr8.1:40483824-40483843 MS.gene63269:CDS 45.0%
! GCCGAAAAGAGCTCCTTTTA+GGG + chr8.1:40483823-40483842 MS.gene63269:CDS 45.0%
! GCTAAGAGTGGTCTTTTTGC+AGG + chr8.1:40479105-40479124 MS.gene63269:CDS 45.0%
! GGTAGGAACTTTTGCAAGTC+TGG + chr8.1:40484576-40484595 MS.gene63269:intron 45.0%
! TGCCGAAAAGAGCTCCTTTT+AGG + chr8.1:40483822-40483841 MS.gene63269:CDS 45.0%
! TGCTCCTTTTGTGCTCAACT+TGG + chr8.1:40482689-40482708 MS.gene63269:CDS 45.0%
!! AGACACCTCAAGTTGATCTG+CGG - chr8.1:40483090-40483109 None:intergenic 45.0%
!! ATGGAGTGGAGTTAGTCTTG+AGG + chr8.1:40484651-40484670 MS.gene63269:CDS 45.0%
!! CAACAGGTTGGTATGAGCTA+TGG + chr8.1:40483731-40483750 MS.gene63269:intron 45.0%
!! CATGAATGGGGAGCATTGAT+TGG + chr8.1:40484937-40484956 MS.gene63269:CDS 45.0%
!! GAAGAGGATGGGAGCATTAT+AGG + chr8.1:40483243-40483262 MS.gene63269:CDS 45.0%
!! GAGTTAGTCTTGAGGAATGG+TGG + chr8.1:40484659-40484678 MS.gene63269:CDS 45.0%
!! GTGGAGTTAGTCTTGAGGAA+TGG + chr8.1:40484656-40484675 MS.gene63269:CDS 45.0%
!! TTTGTGTTGTTTCCTGGCCA+TGG - chr8.1:40482411-40482430 None:intergenic 45.0%
!!! ATTATTTTTTATATAGTTTT+TGG - chr8.1:40479853-40479872 None:intergenic 5.0%
AAAGATGAGACACCATGGCC+AGG + chr8.1:40482396-40482415 MS.gene63269:CDS 50.0%
AAGGTATGTCTCGCGATCGA+TGG - chr8.1:40481379-40481398 None:intergenic 50.0%
ACAGATGAGTGGAAGCAGCA+AGG + chr8.1:40480553-40480572 MS.gene63269:CDS 50.0%
AGCTTCAGGACCTGACTGAA+AGG - chr8.1:40481407-40481426 None:intergenic 50.0%
AGGTATGTCTCGCGATCGAT+GGG - chr8.1:40481378-40481397 None:intergenic 50.0%
ATTGGGGCTGTTCCCCTAAA+AGG - chr8.1:40483839-40483858 None:intergenic 50.0%
CATAGCATGGCCTGCAAACA+GGG - chr8.1:40479744-40479763 None:intergenic 50.0%
CGCCACTGTCCAATATGGTA+TGG + chr8.1:40483926-40483945 MS.gene63269:CDS 50.0%
CTGTAGGGCGTACAGTAGAA+GGG + chr8.1:40479686-40479705 MS.gene63269:CDS 50.0%
GCATACTCGTGGTTGGAGAT+CGG + chr8.1:40483790-40483809 MS.gene63269:CDS 50.0%
GCGATCGATGGGAAACCATT+TGG - chr8.1:40481367-40481386 None:intergenic 50.0%
GGCCTAATGGGAAGATTCCT+TGG + chr8.1:40484742-40484761 MS.gene63269:CDS 50.0%
GGGCCTGATGTTAAGCAATG+TGG + chr8.1:40485129-40485148 MS.gene63269:CDS 50.0%
GGGCCTGTTTATGTTGGATC+AGG + chr8.1:40483123-40483142 MS.gene63269:CDS 50.0%
TCATAGCATGGCCTGCAAAC+AGG - chr8.1:40479745-40479764 None:intergenic 50.0%
TCTGTAGGGCGTACAGTAGA+AGG + chr8.1:40479685-40479704 MS.gene63269:CDS 50.0%
TCTTCATCTCCCTCCACTCT+TGG - chr8.1:40480101-40480120 None:intergenic 50.0%
TGACGCGGTTGATCCAGAAA+AGG + chr8.1:40480594-40480613 MS.gene63269:CDS 50.0%
TGTAGGGCGTACAGTAGAAG+GGG + chr8.1:40479687-40479706 MS.gene63269:CDS 50.0%
TTAAGGCCGCCTATGAAGCA+CGG - chr8.1:40483010-40483029 None:intergenic 50.0%
TTCAGGACCTGACTGAAAGG+CGG - chr8.1:40481404-40481423 None:intergenic 50.0%
TTGCCACCTGACGTGTTATG+TGG + chr8.1:40482899-40482918 MS.gene63269:intron 50.0%
TTGTGTCCGTGCTTCATAGG+CGG + chr8.1:40483001-40483020 MS.gene63269:intron 50.0%
! GCAGATCAACTTGAGGTGTC+TGG + chr8.1:40483089-40483108 MS.gene63269:intron 50.0%
! TACCAAGGCGTTCATTGCAC+CGG - chr8.1:40482559-40482578 None:intergenic 50.0%
ACCTGACTGAAAGGCGGTCA+AGG - chr8.1:40481398-40481417 None:intergenic 55.0%
ACCTTGACCGCCTTTCAGTC+AGG + chr8.1:40481394-40481413 MS.gene63269:CDS 55.0%
AGTGTGGCTTCCCTGTTTGC+AGG + chr8.1:40479731-40479750 MS.gene63269:CDS 55.0%
CTACGAAGACCGGACACTGT+GGG + chr8.1:40483518-40483537 MS.gene63269:CDS 55.0%
GGAGACTCAAGCTGCTCCAA+AGG + chr8.1:40483960-40483979 MS.gene63269:CDS 55.0%
TACGAAGACCGGACACTGTG+GGG + chr8.1:40483519-40483538 MS.gene63269:CDS 55.0%
TCAGCCGCCACTGTCCAATA+TGG + chr8.1:40483921-40483940 MS.gene63269:CDS 55.0%
TCAGTGAGCAAGCAGACAGC+CGG - chr8.1:40484052-40484071 None:intergenic 55.0%
TGTCAGTGTCGTGTCGTGTC+TGG + chr8.1:40479959-40479978 MS.gene63269:intron 55.0%
TTGGACAGTGGCGGCTGAAT+AGG - chr8.1:40483919-40483938 None:intergenic 55.0%
!! GAGCGTTTTGACGCCTTAGG+AGG - chr8.1:40483186-40483205 None:intergenic 55.0%
!! TCGAAGGCACCAGACGATGA+TGG + chr8.1:40484793-40484812 MS.gene63269:CDS 55.0%
!!! CGAGAGCGTTTTGACGCCTT+AGG - chr8.1:40483189-40483208 None:intergenic 55.0%
AGCCGGTGCAATGAACGCCT+TGG + chr8.1:40482554-40482573 MS.gene63269:CDS 60.0%
CCTCGTATCCCCACAGTGTC+CGG - chr8.1:40483530-40483549 None:intergenic 60.0%
GCTACGAAGACCGGACACTG+TGG + chr8.1:40483517-40483536 MS.gene63269:CDS 60.0%
CCGGACACTGTGGGGATACG+AGG + chr8.1:40483527-40483546 MS.gene63269:CDS 65.0%
CTTCTCAGGTGCTCGCGGCT+CGG - chr8.1:40482016-40482035 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 40479099 40485164 40479099 ID=MS.gene63269
chr8.1 mRNA 40479099 40485164 40479099 ID=MS.gene63269.t1;Parent=MS.gene63269
chr8.1 exon 40479099 40479173 40479099 ID=MS.gene63269.t1.exon1;Parent=MS.gene63269.t1
chr8.1 CDS 40479099 40479173 40479099 ID=cds.MS.gene63269.t1;Parent=MS.gene63269.t1
chr8.1 exon 40479634 40479829 40479634 ID=MS.gene63269.t1.exon2;Parent=MS.gene63269.t1
chr8.1 CDS 40479634 40479829 40479634 ID=cds.MS.gene63269.t1;Parent=MS.gene63269.t1
chr8.1 exon 40480093 40480269 40480093 ID=MS.gene63269.t1.exon3;Parent=MS.gene63269.t1
chr8.1 CDS 40480093 40480269 40480093 ID=cds.MS.gene63269.t1;Parent=MS.gene63269.t1
chr8.1 exon 40480524 40480620 40480524 ID=MS.gene63269.t1.exon4;Parent=MS.gene63269.t1
chr8.1 CDS 40480524 40480620 40480524 ID=cds.MS.gene63269.t1;Parent=MS.gene63269.t1
chr8.1 exon 40481149 40481415 40481149 ID=MS.gene63269.t1.exon5;Parent=MS.gene63269.t1
chr8.1 CDS 40481149 40481415 40481149 ID=cds.MS.gene63269.t1;Parent=MS.gene63269.t1
chr8.1 exon 40481765 40482110 40481765 ID=MS.gene63269.t1.exon6;Parent=MS.gene63269.t1
chr8.1 CDS 40481765 40482110 40481765 ID=cds.MS.gene63269.t1;Parent=MS.gene63269.t1
chr8.1 exon 40482315 40482575 40482315 ID=MS.gene63269.t1.exon7;Parent=MS.gene63269.t1
chr8.1 CDS 40482315 40482575 40482315 ID=cds.MS.gene63269.t1;Parent=MS.gene63269.t1
chr8.1 exon 40482663 40482875 40482663 ID=MS.gene63269.t1.exon8;Parent=MS.gene63269.t1
chr8.1 CDS 40482663 40482875 40482663 ID=cds.MS.gene63269.t1;Parent=MS.gene63269.t1
chr8.1 exon 40483093 40483264 40483093 ID=MS.gene63269.t1.exon9;Parent=MS.gene63269.t1
chr8.1 CDS 40483093 40483264 40483093 ID=cds.MS.gene63269.t1;Parent=MS.gene63269.t1
chr8.1 exon 40483349 40483548 40483349 ID=MS.gene63269.t1.exon10;Parent=MS.gene63269.t1
chr8.1 CDS 40483349 40483548 40483349 ID=cds.MS.gene63269.t1;Parent=MS.gene63269.t1
chr8.1 exon 40483737 40484090 40483737 ID=MS.gene63269.t1.exon11;Parent=MS.gene63269.t1
chr8.1 CDS 40483737 40484090 40483737 ID=cds.MS.gene63269.t1;Parent=MS.gene63269.t1
chr8.1 exon 40484577 40485164 40484577 ID=MS.gene63269.t1.exon12;Parent=MS.gene63269.t1
chr8.1 CDS 40484577 40485164 40484577 ID=cds.MS.gene63269.t1;Parent=MS.gene63269.t1
Gene Sequence

>MS.gene63269

ATGGAAGCTAAGAGTGGTCTTTTTGCAGGGTCTCTTAACAGCAATGAACTTGTGGTCATCCAAAAACAAAATGAGGTAAACCATACATATATTAATTTAGACCACAAGTTAATTATACCTACATCCTTTTTTATAAGCCCTTTGTTATTTTTATATGTAGCATATTAGGGAAAAAATATATAATATATTTAATGTGTTCATTTTGTTTATAAAATGTTCATTATATTTCGTGTATGGATGTTACTAATATACATTTTTGTGTATAAATATATCTTTTTTTGAAGGAGTGTATAAATATATCTTGTGTACGTTTCATCTCTCTAAACAAAAAACTAGTAATATTAATAAGAAATGTATTTTAAATAAATAATAATAAATATATCTAGTTATATTTAAAGAAACTTTTTTTTTTCTAAACATATAGTTTATTATTAAATAAACTATACTTTTAGATAAATGTATTGTAATTTTCAATATTATTTTTATTATTTTTTGGAATAACACGTACAAGCGTAATTAATTTTTGTTTATGCAGCCTAAGGCAGTGAAAAACTTGGATGGCCAAGATTGTGAGATATGTGGTGATTCTGTAGGGCGTACAGTAGAAGGGGACTTATTTGTAGCTTGTGAAGAGTGTGGCTTCCCTGTTTGCAGGCCATGCTATGAGTATGAAAGGAAAGAAGGGTCTCAAAATTGCCCTCAGTGCCATACAAGATACAAGCGTATCAAAGGTATTTCAAAATTAATCAATCCAAAAACTATATAAAAAATAATAAACGAAAACTATATAAAAAAATAATAAACGTAACACTGATACAATAATAACACATGTGGTTACGTTCAATCACATTTAGTTTCAATGTCAGTGTCGTGTCGTGTCTGGTATGTATGTCTTTGTTTATGAGCTTCATGCATAGCATAGTATACAACTATACATAGATTTCTCTAATGATATAACTTTCTTTTTTTATTGTTATTTCTTCTCATGCAAAAGGAAGTCCAAGAGTGGAGGGAGATGAAGATGAAGAAGATGTGGATGATATTGAACAAGAATTTAAAATGGAAGAGGAAAAGTACAAGCTTATGCATGAAGATAATATGAATAGCATTGATGATGATGATGCAAAATATAGGGAGCAACCCTTATATTCTCACAGTATTGGAGAAAATTGTATGTTTTGTTATCCTATAAATTTAATTAAGCTGAACTATATGATTAAGTAATTAATTAACTCAATGAGCTTCAACTTTTTTCCCTCTTAATTTGCAATTTGAAATTATCCATCTATTTTATGAGGAAGCAGTAGCCCTAATTTTCTTCTTGACAATAAGTAAAGAGAAAAAAACATATTAAGCATATATAAAATAAAAACAGGTGCTTGTTTATTATAAATATAACTATCATGTTTGATCTTCATGAAGCAGATGGTGCAAAATTAGATAACAAGGATAAAACAGATGAGTGGAAGCAGCAAGGAAATCTGTTGATCGAAACTGACGCGGTTGATCCAGAAAAGGCCATGTATGTATGTCATACATCATGAAATTAGGAAACTTGTGATCTAACTCTCTTAACAACGATATATGCCGGTGTCTTTTACTCTAGAAAACTATCATAAACACTTGTTTGAGCTTATCTAGTGCATAAACACTTGTAAGATTGTCCGAGACAACTTATGAAACATCTTATAGCTAATATGAAAATATTTAGACTTTATTTTTGCTAAAGAAATATACATGTGTCGTTTGCACATGAAAATCATCATATACTAATACTATTAGGGCCTACATAGATTGGCTTTGAATTTATCTAATGACATAAGCACTTGTGGGACTATTTGGAAGAGGTTATAAAAACAGCTTATGGCACGTCTATAGGCTACTTTCAGATTATTAATATAAGCTCTTCAGGGTAGATTAAGATAACAACTTATAGCGTATATGAAAACAGACTGCCTTTATTTTATCATTTTGTTAAAGAAATAACTTGTGCTTATGTTTTAAGCACTTAATTAAGTTGTTTATGTGTAACATATATTGATGCATGCAGGAAAGATGAAACTAGACAGCCACTATCAAGGAAAGTAGCAATACCTTCAGGAAGACTCAGTCCTTATAGAATGATGGTTGTGGCAAGGCTCATCCTTCTATTACTCTTCTTTGAGTACAGAATCTCTCATCCAGTACCTGATGCAATTGGACTTTGGTTCATATCAGTATCATGTGAAATCTGGCTTGCATTGTCATGGATACTTGATCAGATTCCCAAATGGTTTCCCATCGATCGCGAGACATACCTTGACCGCCTTTCAGTCAGGTCCTGAAGCTTATTTTACTCTCATATAGTTGATATCATTCTACTACTTTTACTCTGAATGACAATTTTATAACTGTCTCTATTACTATTCGTGATAAAATGCCTCTATTACTATGTGTGATAGAAGCCACGGATAAGCGAAAAGTAAATGAAAGTTATATTGATCATGAAATTATGAATTACATCAAGGAGTACATAAGGCTTGTATAGTCAACTGGCTCGTATAACTAACTGGTTTAACTAACTTTCACAACTATTGTTTCGGAGGGGATTTGAACTCGACTCCTAAGGTTACGATGTCAAACTTTTAGCATTGAACTGATACCAGCTGGACTTAATTGTAATGCAGGTTTGAGCCGGAAAACAAGCCTAATATGCTTTCTCCAATAGATATCTTTATAACAACCGCAGATCCAATCAAGGAACCACCTCTTGTTACAGCAAATACTGTTCTTTCAATTTTGGCACTAGATTATCCTGCAAACAAAATTTCATGTTACGTTTCTGATGACGGCGCTTCCATGCTCACCTTTGAAGCACTTCAAGAAACAGCTGAATTTGCGCAAAAATGGGTACCTTTCTGTAAACAATTCTCTACCGAGCCGCGAGCACCTGAGAAGTATTTCTCTGAGAAGATAGACTTTCTTAAGGATAAGCTTCAACCGACATATGTAAAAGAACGCCGTGCTATGAAGGTTAGTATCATAGCATGCACTAAATTACAGAAATGTTATTTGAACATCAATTTGGGACAACAACGTTTTCATTAACAACCATTTAAAAAGTTGTCAAATTCTGTTGTTCCAAATTGATTTCAAATAACTGTTTAGTTTTATTAGAGTATACAATATACAACAGAATACTACAGCAGCTTCATTGTCCCCTTACTTTTCTAACAGAGAGAATATGAAGAGTTTAAGGTGAGAATAAATGCGCTTGTGGCTAAATCTATGAGAGTTCCATCAGAAGGTTGGAGTATGAAAGATGAGACACCATGGCCAGGAAACAACACAAAAGATCATCCAAGTATGATACAAATACTTCTTGGTCACAATGGAGGAGACAATGAAGGAAATGAACTTCCATCTCTCGTCTACATTTCTAGAGAGAAAAGACCTGCATTTCAACATCACACAAAAGCCGGTGCAATGAACGCCTTGGTAATTTACATTTCAATTTCAACATTGCATTGATTGACTTTTCTGATCAAAATTCATCAAACTAATATTTTTAATCTGTCTATTCAGCTTCGTGTATCGGCAGTATTGAGCAATGCTCCTTTTGTGCTCAACTTGGACTGCAATCATTATGTGAATTACAGCAAAGTTGTGAGAGAAGCCATGTGTTTCTTTATGGACATTCAACTTGGGAATAGTATTGCTTTTGTTCAGTTTCCACTGAGATTTGATAGTCTTGATAGGAACGATCGTTATGCCAACAAAAACACTATTTTATTTGATGTAAGTTCCACAGTTTAAATCATTTGCCACCTGACGTGTTATGTGGTTACATTCAGTCTTTCCATTTGCTTAAACTGTTGCCAGTTTTTAGATTTCAGTGTCATTATTGTGTATGGTGTTTGTGTTTGTGTCCGTGCTTCATAGGCGGCCTTAATTGTATTTGTGTGAATGGAATTTGACAATGACATGTTACCCTTTCTATTTTGTTTTTCCGCAGATCAACTTGAGGTGTCTGGATGGAATTCAAGGGCCTGTTTATGTTGGATCAGGTTGTATATTCAGAAGGAAAGCTTTAAATGGCTTTGATCCTCCTAAGGCGTCAAAACGCTCTCGAGTTGTACAAGTTCACTCAAAACAGGATGAAAATGAAGAGGATGGGAGCATTATAGGTGACAATAATTTCACTTGAAAAACAAATAAAATGAAATTATTTTCTCTTTTCATGTATATAACAATTACTTTTCTTTTAATAGAAGCAACTGATGAAGACAAGCAGCCATTGCAATTAGATAAGGATACTGAAAATAAATTTGGAAAGTCTACACTCTTCATGAATTCTTCACTGACAGAAGATGGTGGTGTAGATCCTTCTTCAACTCAAGAAGTCCTGCTTAAAGAGGCCATTCATGTCATGAGTTGTAGCTACGAAGACCGGACACTGTGGGGATACGAGGTATATTATAGAACAAAAGTAATATTTTAACACACAAGTTTGATAACAAATTTCAACAACACTTTGAATGGTTAAGCAACTTCAAACACAAGTTCAATACAATTTTTACGTGTCTTAAGACCTTTTAGGTGTATATTTAAACTGTCAAACCATATAAATTGTTATGAATACACTTTTTCCATCAACAGGTTGGTATGAGCTATGGATCTATAGCATCAGATATTCTAACAAGTTTAAAGATGCATACTCGTGGTTGGAGATCGGTATACTGCATGCCGAAAAGAGCTCCTTTTAGGGGAACAGCCCCAATCAATCTTACAGAAAGACTTAACCAAGTTCTTAGATGGGCAGTAGGATCACTTGAGATCCTATTCAGCCGCCACTGTCCAATATGGTATGGTTTTAAAGAAGGGAGACTCAAGCTGCTCCAAAGGATTGCCTATATTAACAGCACTGTCTACCCTTTTAGTGCATTGCCTCTCATAATATATTGTATCGTTCCGGCTGTCTGCTTGCTCACTGATAAATTCATCACACCATCGGTAATCAATTTCCTTCTATTTTATACATTGTCACTGCAAATAAATAAAAATTATACATGCATGATGGATTCAATAAGGTCGACGTAGATATTTGTTGAGATATTTTGAAAGTTAATATAACAAAGTGGTATCATGGCATGATGCATGGTAGAAAAGTTTTACATAGTCACAACGTTCATACTACTCATAAGTACTTGCGAGGTTGTTTGGAAAAGCTTATGAAAATAATTTATTACACTTACATAAGTTATTTTCAGCTTATAAACTATATGAAAACAGCTTATAGTTTATGAAAACAGTTTATAACTTTATGAACCCAATTTGATTATATTTTATCCCTTGTTATAGAAATAGCTTATGCATTAACACATAAATGACAAGTGCTTATGCTATAAGTTTAATTAAGTTTAACCAAATAGTCCCTTAATCTCTTATTGTTAACTAATGAAGCCATTATTCATTGTGTTTACAAATAATATTGTTCAGGTAGGAACTTTTGCAAGTCTGGTATTCATTTCTCTATTCATCTCAATCTTCGCCTCTTCTATTCTTGAATTGAGATGGAGTGGAGTTAGTCTTGAGGAATGGTGGAGAAATCAACAATTTTGGGTCATTGGAAGTATATCAGCACATCTCTTTGCAATTGTACAAGGCCTAATGGGAAGATTCCTTGGTAGATTTAATGCACATTTCAACATTGTATCGAAGGCACCAGACGATGATGGCGAGTTTAACGAACTGTACACCATTAGATGGACAGTACTACTAATACCTCCAACCACAGTGACTATATTCAACATTATTGGTATTGTTGCTGGTTTCACAGATGCTATAAATAGCGGTGAACATGAATGGGGAGCATTGATTGGGAAATTGTTCTTTTCTTCATGGGTTATTGCTCATCTTTATCCTTTCCTTAAAGGACTAATGGGAAGACAGAATAGAACACCAACTCTTGTTGTCATTTGGTCTGTGCTTTTGGCTTCTATCTTTTCCTTGGTTTGGGTAAGAATTGACCCTTTTGTGTTGAAAACTAAGGGGCCTGATGTTAAGCAATGTGGAATTAGTTGTTGA
Protein sequence

>MS.gene63269.t1

MEAKSGLFAGSLNSNELVVIQKQNEPKAVKNLDGQDCEICGDSVGRTVEGDLFVACEECGFPVCRPCYEYERKEGSQNCPQCHTRYKRIKGSPRVEGDEDEEDVDDIEQEFKMEEEKYKLMHEDNMNSIDDDDAKYREQPLYSHSIGENYGAKLDNKDKTDEWKQQGNLLIETDAVDPEKAMKDETRQPLSRKVAIPSGRLSPYRMMVVARLILLLLFFEYRISHPVPDAIGLWFISVSCEIWLALSWILDQIPKWFPIDRETYLDRLSVRFEPENKPNMLSPIDIFITTADPIKEPPLVTANTVLSILALDYPANKISCYVSDDGASMLTFEALQETAEFAQKWVPFCKQFSTEPRAPEKYFSEKIDFLKDKLQPTYVKERRAMKREYEEFKVRINALVAKSMRVPSEGWSMKDETPWPGNNTKDHPSMIQILLGHNGGDNEGNELPSLVYISREKRPAFQHHTKAGAMNALLRVSAVLSNAPFVLNLDCNHYVNYSKVVREAMCFFMDIQLGNSIAFVQFPLRFDSLDRNDRYANKNTILFDINLRCLDGIQGPVYVGSGCIFRRKALNGFDPPKASKRSRVVQVHSKQDENEEDGSIIEATDEDKQPLQLDKDTENKFGKSTLFMNSSLTEDGGVDPSSTQEVLLKEAIHVMSCSYEDRTLWGYEVGMSYGSIASDILTSLKMHTRGWRSVYCMPKRAPFRGTAPINLTERLNQVLRWAVGSLEILFSRHCPIWYGFKEGRLKLLQRIAYINSTVYPFSALPLIIYCIVPAVCLLTDKFITPSVGTFASLVFISLFISIFASSILELRWSGVSLEEWWRNQQFWVIGSISAHLFAIVQGLMGRFLGRFNAHFNIVSKAPDDDGEFNELYTIRWTVLLIPPTTVTIFNIIGIVAGFTDAINSGEHEWGALIGKLFFSSWVIAHLYPFLKGLMGRQNRTPTLVVIWSVLLASIFSLVWVRIDPFVLKTKGPDVKQCGISC