Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64058.t1 | KEH40236.1 | 90.1 | 324 | 26 | 3 | 51 | 369 | 129 | 451 | 1.90E-149 | 538.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64058.t1 | G7I7U5 | 90.1 | 324 | 26 | 3 | 51 | 369 | 129 | 451 | 1.3e-149 | 538.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051903 | MS.gene64058 | -0.807143 | 5.84E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene64058 | -0.805602 | 1.23E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene64058 | 0.801829 | 7.48E-49 | -1.69E-46 |
| MS.gene058182 | MS.gene64058 | -0.814133 | 1.80E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64058.t1 | MTR_1g025920 | 89.096 | 376 | 32 | 4 | 2 | 369 | 77 | 451 | 0.0 | 607 |
| MS.gene64058.t1 | MTR_1g025920 | 89.096 | 376 | 32 | 4 | 2 | 369 | 77 | 451 | 0.0 | 605 |
| MS.gene64058.t1 | MTR_3g114450 | 44.509 | 346 | 140 | 12 | 52 | 369 | 88 | 409 | 2.52e-70 | 226 |
| MS.gene64058.t1 | MTR_3g114450 | 45.245 | 347 | 136 | 14 | 52 | 369 | 88 | 409 | 3.19e-70 | 227 |
| MS.gene64058.t1 | MTR_3g114340 | 43.478 | 345 | 137 | 12 | 56 | 369 | 22 | 339 | 1.82e-66 | 216 |
| MS.gene64058.t1 | MTR_3g114450 | 40.635 | 315 | 135 | 12 | 52 | 338 | 88 | 378 | 3.72e-48 | 167 |
| MS.gene64058.t1 | MTR_5g022790 | 35.598 | 368 | 190 | 16 | 30 | 369 | 51 | 399 | 2.25e-39 | 148 |
| MS.gene64058.t1 | MTR_8g075120 | 37.430 | 358 | 164 | 16 | 42 | 369 | 51 | 378 | 8.15e-34 | 130 |
| MS.gene64058.t1 | MTR_5g022790 | 42.781 | 187 | 87 | 8 | 198 | 369 | 83 | 264 | 4.97e-29 | 116 |
| MS.gene64058.t1 | MTR_5g022790 | 42.781 | 187 | 87 | 8 | 198 | 369 | 83 | 264 | 2.45e-28 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64058.t1 | AT4G35890 | 30.851 | 376 | 203 | 17 | 12 | 369 | 76 | 412 | 2.51e-22 | 97.8 |
| MS.gene64058.t1 | AT4G35890 | 30.319 | 376 | 205 | 16 | 12 | 369 | 76 | 412 | 2.91e-22 | 98.6 |
| MS.gene64058.t1 | AT5G66100 | 28.895 | 353 | 186 | 12 | 42 | 369 | 66 | 378 | 2.38e-15 | 77.4 |
Find 0 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTTTTTTCATTTG+AGG | - | 10385:1924-1943 | MS.gene64058:CDS | 10.0% |
| !!! | AAAATCATTTTCAGAAAATT+AGG | + | 10385:1660-1679 | MS.gene64058:intergenic | 15.0% |
| !!! | AAATCATTTTCAGAAAATTA+GGG | + | 10385:1659-1678 | MS.gene64058:intergenic | 15.0% |
| !! | ACCTAAAATAATAATCAATC+TGG | + | 10385:3275-3294 | MS.gene64058:intergenic | 20.0% |
| !!! | ACCAGATTGATTATTATTTT+AGG | - | 10385:3271-3290 | MS.gene64058:CDS | 20.0% |
| !!! | ATTTTATATCAACTTTAGTG+TGG | - | 10385:2449-2468 | MS.gene64058:intron | 20.0% |
| ! | ACTATAACTATTCTGATGAT+AGG | + | 10385:2875-2894 | MS.gene64058:intergenic | 25.0% |
| ! | ATGATTGAACATTATAAACG+TGG | - | 10385:2090-2109 | MS.gene64058:CDS | 25.0% |
| ! | TTAATGAATTGGATCGAATA+TGG | - | 10385:1714-1733 | MS.gene64058:intron | 25.0% |
| ! | TTGGATTTATATCCAGTATT+AGG | - | 10385:2391-2410 | MS.gene64058:intron | 25.0% |
| ! | TTGTACTAAATAGCTTATTG+TGG | - | 10385:2262-2281 | MS.gene64058:intron | 25.0% |
| !! | AATGTTGTTTGTGTTGAATT+CGG | - | 10385:2022-2041 | MS.gene64058:CDS | 25.0% |
| !! | CTTTCTAGAGATTAATGAAT+TGG | - | 10385:1703-1722 | MS.gene64058:intron | 25.0% |
| !! | TTTAATTACTAGTTTCGACA+TGG | + | 10385:1790-1809 | MS.gene64058:intergenic | 25.0% |
| !!! | CAAAACTCTATTTCTGTTTT+TGG | - | 10385:2372-2391 | MS.gene64058:intron | 25.0% |
| !!! | TAACACAAAATCTAGTTCTA+TGG | - | 10385:2561-2580 | MS.gene64058:intron | 25.0% |
| !!! | TCTGAAAATGATTTTTTTCC+AGG | - | 10385:1665-1684 | MS.gene64058:intron | 25.0% |
| !!! | TGAGTTTTTAAAGTCCAATA+TGG | - | 10385:3400-3419 | MS.gene64058:CDS | 25.0% |
| ACAACAATTATATTCCTTCC+TGG | + | 10385:1995-2014 | MS.gene64058:intergenic | 30.0% | |
| AGCTTATTGTGGAAAAATAG+TGG | - | 10385:2273-2292 | MS.gene64058:intron | 30.0% | |
| AGGTATAAAGTGATTGTAAG+AGG | - | 10385:1944-1963 | MS.gene64058:CDS | 30.0% | |
| ATCAACTTTAGTGTGGTAAA+TGG | - | 10385:2456-2475 | MS.gene64058:intron | 30.0% | |
| ATCAGAATAGTTATAGTAGC+AGG | - | 10385:2878-2897 | MS.gene64058:intron | 30.0% | |
| TATACTGAGAATCCTGTATA+TGG | - | 10385:2045-2064 | MS.gene64058:CDS | 30.0% | |
| TATTAGGCTATTGTCAAACA+GGG | - | 10385:2407-2426 | MS.gene64058:intron | 30.0% | |
| TGACAAAATGACAGAAAATG+AGG | + | 10385:3122-3141 | MS.gene64058:intergenic | 30.0% | |
| ! | AACAAGCTTTAACCTACAAA+GGG | + | 10385:1874-1893 | MS.gene64058:intergenic | 30.0% |
| !! | AAGTTTGCTATCAAGGTAAT+TGG | + | 10385:3443-3462 | MS.gene64058:intergenic | 30.0% |
| !! | ACCTTTCTATTGTTTTGTAG+GGG | - | 10385:2500-2519 | MS.gene64058:intron | 30.0% |
| !! | GACCTTTCTATTGTTTTGTA+GGG | - | 10385:2499-2518 | MS.gene64058:intron | 30.0% |
| !! | TGACCTTTCTATTGTTTTGT+AGG | - | 10385:2498-2517 | MS.gene64058:intron | 30.0% |
| AAAGTCCAATATGGATGAAG+AGG | - | 10385:3409-3428 | MS.gene64058:CDS | 35.0% | |
| AAGTAAACAGAGAACATACC+TGG | + | 10385:1686-1705 | MS.gene64058:intergenic | 35.0% | |
| AAGTCCAATATGGATGAAGA+GGG | - | 10385:3410-3429 | MS.gene64058:CDS | 35.0% | |
| AATCTGGTTGACTATCACAT+TGG | + | 10385:3259-3278 | MS.gene64058:intergenic | 35.0% | |
| ATAGAACAAAACCTGAGAAG+TGG | + | 10385:1630-1649 | MS.gene64058:intergenic | 35.0% | |
| ATCATCACCGGAACAATAAT+TGG | - | 10385:2779-2798 | MS.gene64058:intron | 35.0% | |
| ATCTTCGATGAAGACAATTC+AGG | + | 10385:1572-1591 | MS.gene64058:intergenic | 35.0% | |
| CAAGTAATGTTGCTAAACAG+TGG | + | 10385:2335-2354 | MS.gene64058:intergenic | 35.0% | |
| CTCTATATGCTACCATATAC+AGG | + | 10385:2060-2079 | MS.gene64058:intergenic | 35.0% | |
| CTGTATATGGTAGCATATAG+AGG | - | 10385:2058-2077 | MS.gene64058:CDS | 35.0% | |
| CTTGCATCCAATTATTGTTC+CGG | + | 10385:2789-2808 | MS.gene64058:intergenic | 35.0% | |
| GTATTAGGCTATTGTCAAAC+AGG | - | 10385:2406-2425 | MS.gene64058:intron | 35.0% | |
| GTTTGACAATAGCCTAATAC+TGG | + | 10385:2406-2425 | MS.gene64058:intergenic | 35.0% | |
| ! | ACAAGCTTTAACCTACAAAG+GGG | + | 10385:1873-1892 | MS.gene64058:intergenic | 35.0% |
| ! | CAACAAGCTTTAACCTACAA+AGG | + | 10385:1875-1894 | MS.gene64058:intergenic | 35.0% |
| ! | CAATTTACCAGGAATTTTGG+CGG | + | 10385:1546-1565 | MS.gene64058:intergenic | 35.0% |
| ! | TGAGGAGTGTGTGAAATTAT+AGG | + | 10385:2526-2545 | MS.gene64058:intergenic | 35.0% |
| ! | TGGCAATTTACCAGGAATTT+TGG | + | 10385:1549-1568 | MS.gene64058:intergenic | 35.0% |
| !! | AGAGTTTTGTCATCATCACT+AGG | + | 10385:2361-2380 | MS.gene64058:intergenic | 35.0% |
| !! | GAGTTTTGTCATCATCACTA+GGG | + | 10385:2360-2379 | MS.gene64058:intergenic | 35.0% |
| AAAAATGCAGCAGTACTAGG+TGG | + | 10385:2994-3013 | MS.gene64057:intergenic | 40.0% | |
| AACAAAACCTGAGAAGTGGA+AGG | + | 10385:1626-1645 | MS.gene64058:intergenic | 40.0% | |
| AATTCAGGTGGCAATTTACC+AGG | + | 10385:1557-1576 | MS.gene64058:intergenic | 40.0% | |
| ACAAAGAAGATTCTGCAGCA+GGG | + | 10385:3236-3255 | MS.gene64058:intergenic | 40.0% | |
| ACTAACCTGGATAAGCAACA+GGG | + | 10385:3048-3067 | MS.gene64058:intergenic | 40.0% | |
| AGTACAATAGCTTCAGATGG+TGG | - | 10385:1410-1429 | MS.gene64058:intron | 40.0% | |
| ATAAGAGACGCATACTAACC+TGG | + | 10385:3061-3080 | MS.gene64058:intergenic | 40.0% | |
| CAATATGGATGAAGAGGGTT+GGG | - | 10385:3415-3434 | MS.gene64058:CDS | 40.0% | |
| CTCATAGGTCTTGGTCTATT+GGG | + | 10385:2601-2620 | MS.gene64058:intergenic | 40.0% | |
| GATCCACGATTAACAACACT+GGG | + | 10385:2182-2201 | MS.gene64058:intergenic | 40.0% | |
| GCATAGGTGGCAGTAATATT+GGG | - | 10385:2623-2642 | MS.gene64058:intron | 40.0% | |
| GCCCCTACAAAACAATAGAA+AGG | + | 10385:2504-2523 | MS.gene64058:intergenic | 40.0% | |
| GTTGAAATTGGTCCTGTCAT+GGG | - | 10385:1491-1510 | MS.gene64058:CDS | 40.0% | |
| TACTAACCTGGATAAGCAAC+AGG | + | 10385:3049-3068 | MS.gene64058:intergenic | 40.0% | |
| TCAAATTCCGCTATGCCATA+GGG | - | 10385:2301-2320 | MS.gene64058:intron | 40.0% | |
| TCGAGTACAATAGCTTCAGA+TGG | - | 10385:1407-1426 | MS.gene64058:intron | 40.0% | |
| TGATCCACGATTAACAACAC+TGG | + | 10385:2183-2202 | MS.gene64058:intergenic | 40.0% | |
| TGGAACAAACAACCCTTGAA+CGG | - | 10385:1461-1480 | MS.gene64058:intron | 40.0% | |
| TGTTGAAATTGGTCCTGTCA+TGG | - | 10385:1490-1509 | MS.gene64058:CDS | 40.0% | |
| TTACTAGTACCTTGTCTCTG+AGG | + | 10385:2544-2563 | MS.gene64058:intergenic | 40.0% | |
| TTCAAATTCCGCTATGCCAT+AGG | - | 10385:2300-2319 | MS.gene64058:intron | 40.0% | |
| TTCGATGAAGACAATTCAGG+TGG | + | 10385:1569-1588 | MS.gene64058:intergenic | 40.0% | |
| ! | ACCTAGTACTGCTGCATTTT+TGG | - | 10385:2993-3012 | MS.gene64058:intron | 40.0% |
| ! | ATGCAAGACCATTTTGTAGG+GGG | - | 10385:2802-2821 | MS.gene64058:intron | 40.0% |
| ! | CCTAGTACTGCTGCATTTTT+GGG | - | 10385:2994-3013 | MS.gene64058:intron | 40.0% |
| ! | GATGCAAGACCATTTTGTAG+GGG | - | 10385:2801-2820 | MS.gene64058:intron | 40.0% |
| ! | GGATGCAAGACCATTTTGTA+GGG | - | 10385:2800-2819 | MS.gene64058:intron | 40.0% |
| ! | TGGATGCAAGACCATTTTGT+AGG | - | 10385:2799-2818 | MS.gene64058:intron | 40.0% |
| !! | GCTTTTGGAGAATCATCAGA+CGG | + | 10385:1317-1336 | MS.gene64058:intergenic | 40.0% |
| AAACAGGGTATGTCTTTGCG+AGG | - | 10385:2422-2441 | MS.gene64058:intron | 45.0% | |
| AAAGACTGGCATACCCCTAA+AGG | + | 10385:3184-3203 | MS.gene64058:intergenic | 45.0% | |
| AACGGCGTCGTTGTTGAAAT+TGG | - | 10385:1479-1498 | MS.gene64058:CDS | 45.0% | |
| AAGACTGGCATACCCCTAAA+GGG | + | 10385:3183-3202 | MS.gene64058:intergenic | 45.0% | |
| AAGGGTTGTTTGTTCCATGC+AGG | + | 10385:1458-1477 | MS.gene64058:intergenic | 45.0% | |
| ACTATAGCCCTATGGCATAG+CGG | + | 10385:2311-2330 | MS.gene64058:intergenic | 45.0% | |
| AGCAGTTAGCTACCCGAATA+TGG | - | 10385:2726-2745 | MS.gene64058:intron | 45.0% | |
| AGCTGATATACAGGATAGGG+AGG | + | 10385:2700-2719 | MS.gene64058:intergenic | 45.0% | |
| AGGGAGCTGATATACAGGAT+AGG | + | 10385:2704-2723 | MS.gene64058:intergenic | 45.0% | |
| AGTGGTATCTTCTTCTCCGA+AGG | - | 10385:1340-1359 | MS.gene64058:CDS | 45.0% | |
| ATACCCCTAAAGGGATCCAA+CGG | + | 10385:3174-3193 | MS.gene64058:intergenic | 45.0% | |
| ATATTCGGGTAGCTAACTGC+TGG | + | 10385:2727-2746 | MS.gene64058:intergenic | 45.0% | |
| CCAACCCTCTTCATCCATAT+TGG | + | 10385:3417-3436 | MS.gene64058:intergenic | 45.0% | |
| CCAATAGACCAAGACCTATG+AGG | - | 10385:2599-2618 | MS.gene64058:intron | 45.0% | |
| CCAATATGGATGAAGAGGGT+TGG | - | 10385:3414-3433 | MS.gene64058:CDS | 45.0% | |
| CCCAAAAATGCAGCAGTACT+AGG | + | 10385:2997-3016 | MS.gene64058:intergenic | 45.0% | |
| CCTCATAGGTCTTGGTCTAT+TGG | + | 10385:2602-2621 | MS.gene64058:intergenic | 45.0% | |
| CGCATAGGTGGCAGTAATAT+TGG | - | 10385:2622-2641 | MS.gene64058:intron | 45.0% | |
| CGGAGAAGAAGATACCACTA+CGG | + | 10385:1339-1358 | MS.gene64058:intergenic | 45.0% | |
| CTAACCTGGATAAGCAACAG+GGG | + | 10385:3047-3066 | MS.gene64058:intergenic | 45.0% | |
| CTTCTCCAAGAGATCATCAC+CGG | - | 10385:2767-2786 | MS.gene64058:intron | 45.0% | |
| GACAAAGAAGATTCTGCAGC+AGG | + | 10385:3237-3256 | MS.gene64058:intergenic | 45.0% | |
| GACTTAGCAACACAACAGAG+AGG | + | 10385:1973-1992 | MS.gene64058:intergenic | 45.0% | |
| GATCTCTTGGAGAAGAGTCA+GGG | + | 10385:2762-2781 | MS.gene64058:intergenic | 45.0% | |
| GGGAGCTGATATACAGGATA+GGG | + | 10385:2703-2722 | MS.gene64058:intergenic | 45.0% | |
| GTACTCGAATTCTTCTCCAC+CGG | + | 10385:1395-1414 | MS.gene64058:intergenic | 45.0% | |
| TCTGAATCCGCCAAAATTCC+TGG | - | 10385:1536-1555 | MS.gene64058:CDS | 45.0% | |
| TGATCTCTTGGAGAAGAGTC+AGG | + | 10385:2763-2782 | MS.gene64058:intergenic | 45.0% | |
| TGATTCTCCAAAAGCCGTAG+TGG | - | 10385:1322-1341 | MS.gene64058:CDS | 45.0% | |
| TTACTTTCCAACAGTGCCGT+TGG | - | 10385:3155-3174 | MS.gene64058:CDS | 45.0% | |
| TTGTTCCGGTGATGATCTCT+TGG | + | 10385:2775-2794 | MS.gene64058:intergenic | 45.0% | |
| TTTGGAGAATCATCAGACGG+CGG | + | 10385:1314-1333 | MS.gene64058:intergenic | 45.0% | |
| ! | GAACCCAGTGTTGTTAATCG+TGG | - | 10385:2176-2195 | MS.gene64058:CDS | 45.0% |
| ! | GAAGATACCACTACGGCTTT+TGG | + | 10385:1332-1351 | MS.gene64058:intergenic | 45.0% |
| ! | TCTGTTGTGTTGCTAAGTCC+AGG | - | 10385:1974-1993 | MS.gene64058:CDS | 45.0% |
| ! | TTGTGTTGCTAAGTCCAGGA+AGG | - | 10385:1978-1997 | MS.gene64058:CDS | 45.0% |
| !! | GTGGTTCTAAGAAACCTGCA+TGG | - | 10385:1441-1460 | MS.gene64058:intron | 45.0% |
| !! | TCGAGGGAAGTTTGCTATCA+AGG | + | 10385:3450-3469 | MS.gene64058:intergenic | 45.0% |
| !! | TGTTACTGACTCCCCTTTGT+AGG | - | 10385:1859-1878 | MS.gene64058:CDS | 45.0% |
| !! | TTTTGGGTCCCTCAAACCAT+TGG | - | 10385:3010-3029 | MS.gene64058:intron | 45.0% |
| AATGCAGCAGTACTAGGTGG+TGG | + | 10385:2991-3010 | MS.gene64058:intergenic | 50.0% | |
| ACAGTGGCACTATAGCCCTA+TGG | + | 10385:2319-2338 | MS.gene64058:intergenic | 50.0% | |
| AGTGGTATCTTCTCCGCTTC+CGG | - | 10385:1367-1386 | MS.gene64058:CDS | 50.0% | |
| ATGCAGCAGTACTAGGTGGT+GGG | + | 10385:2990-3009 | MS.gene64058:intergenic | 50.0% | |
| GAAGATACCACTACCGCCTT+CGG | + | 10385:1359-1378 | MS.gene64058:intergenic | 50.0% | |
| GAGAGGAACCCCCTACAAAA+TGG | + | 10385:2813-2832 | MS.gene64058:intergenic | 50.0% | |
| GCACTCTAGCTGCTCTATGA+CGG | - | 10385:2235-2254 | MS.gene64058:intron | 50.0% | |
| GGAAGGGTCCAATGGTTTGA+GGG | + | 10385:3021-3040 | MS.gene64058:intergenic | 50.0% | |
| GGATGCTTGGCACCATATTC+GGG | + | 10385:2741-2760 | MS.gene64058:intergenic | 50.0% | |
| GGGAAGAATGTTGCAGGAGA+AGG | + | 10385:3216-3235 | MS.gene64058:intergenic | 50.0% | |
| GGGATGCTTGGCACCATATT+CGG | + | 10385:2742-2761 | MS.gene64058:intergenic | 50.0% | |
| GGGTGCCTCAATATTCCTCT+GGG | + | 10385:2970-2989 | MS.gene64058:intergenic | 50.0% | |
| GGTATCTTCTTCTCCGAAGG+CGG | - | 10385:1343-1362 | MS.gene64058:CDS | 50.0% | |
| TATACAGGATAGGGAGGCAG+TGG | + | 10385:2694-2713 | MS.gene64058:intergenic | 50.0% | |
| TCAACAACGACGCCGTTCAA+GGG | + | 10385:1476-1495 | MS.gene64058:intergenic | 50.0% | |
| TCACACACTCCTCAGAGACA+AGG | - | 10385:2532-2551 | MS.gene64058:intron | 50.0% | |
| TGATAGGAACCATCTCCTCG+TGG | + | 10385:2859-2878 | MS.gene64058:intergenic | 50.0% | |
| TGCCTCAATATTCCTCTGGG+AGG | + | 10385:2967-2986 | MS.gene64058:intergenic | 50.0% | |
| TGCCTCCCAGAGGAATATTG+AGG | - | 10385:2962-2981 | MS.gene64058:intron | 50.0% | |
| TGGATCACCTTCCACTTCTC+AGG | - | 10385:1616-1635 | MS.gene64058:intron | 50.0% | |
| TGGGTGCCTCAATATTCCTC+TGG | + | 10385:2971-2990 | MS.gene64058:intergenic | 50.0% | |
| TTCAACAACGACGCCGTTCA+AGG | + | 10385:1477-1496 | MS.gene64058:intergenic | 50.0% | |
| ! | AGTGCCGTTGGATCCCTTTA+GGG | - | 10385:3167-3186 | MS.gene64058:CDS | 50.0% |
| ! | ATGTTGCAGGAGAAGGCATG+TGG | + | 10385:3209-3228 | MS.gene64058:intergenic | 50.0% |
| ! | TGTTGCAGGAGAAGGCATGT+GGG | + | 10385:3208-3227 | MS.gene64058:intergenic | 50.0% |
| ! | TTGGATAAGCTGCTCTGAGC+AGG | + | 10385:2655-2674 | MS.gene64058:intergenic | 50.0% |
| !! | TTGGCGGATTCAGACAAAGC+AGG | + | 10385:1530-1549 | MS.gene64058:intergenic | 50.0% |
| AAGGGATCCAACGGCACTGT+TGG | + | 10385:3165-3184 | MS.gene64058:intergenic | 55.0% | |
| AATCATCAGACGGCGGAGGT+TGG | + | 10385:1307-1326 | MS.gene64058:intergenic | 55.0% | |
| AGACCTATGAGGCGCATAGG+TGG | - | 10385:2610-2629 | MS.gene64058:intron | 55.0% | |
| AGCAGGCGTGATCATGATCG+TGG | - | 10385:2895-2914 | MS.gene64058:intron | 55.0% | |
| AGGAACCATCTCCTCGTGGA+TGG | + | 10385:2855-2874 | MS.gene64058:intergenic | 55.0% | |
| ATAAGCAACAGGGGCTGGGA+AGG | + | 10385:3038-3057 | MS.gene64058:intergenic | 55.0% | |
| CACGATTCAGCACCCATGAC+AGG | + | 10385:1506-1525 | MS.gene64058:intergenic | 55.0% | |
| CCAAGACCTATGAGGCGCAT+AGG | - | 10385:2607-2626 | MS.gene64058:intron | 55.0% | |
| CCTATGCGCCTCATAGGTCT+TGG | + | 10385:2610-2629 | MS.gene64058:intergenic | 55.0% | |
| CCTCTCGCAGGGGTCATTTA+GGG | - | 10385:2827-2846 | MS.gene64058:intron | 55.0% | |
| CTGGATAAGCAACAGGGGCT+GGG | + | 10385:3042-3061 | MS.gene64058:intergenic | 55.0% | |
| GAATTCTTCTCCACCGGAGC+CGG | + | 10385:1389-1408 | MS.gene64058:intergenic | 55.0% | |
| GCAGCAGGGAAGAATGTTGC+AGG | + | 10385:3222-3241 | MS.gene64058:intergenic | 55.0% | |
| GCTGGAGGGAGCTGATATAC+AGG | + | 10385:2709-2728 | MS.gene64058:intergenic | 55.0% | |
| GGAACCATCTCCTCGTGGAT+GGG | + | 10385:2854-2873 | MS.gene64058:intergenic | 55.0% | |
| GGAGAAGAGTCAGGGATGCT+TGG | + | 10385:2754-2773 | MS.gene64058:intergenic | 55.0% | |
| GGGAAGGGTCCAATGGTTTG+AGG | + | 10385:3022-3041 | MS.gene64058:intergenic | 55.0% | |
| GGTGGCAGTAATATTGGGCC+TGG | - | 10385:2628-2647 | MS.gene64058:intron | 55.0% | |
| TAAGCAACAGGGGCTGGGAA+GGG | + | 10385:3037-3056 | MS.gene64058:intergenic | 55.0% | |
| TCCTCTCGCAGGGGTCATTT+AGG | - | 10385:2826-2845 | MS.gene64058:intron | 55.0% | |
| TCGGGTAGCTAACTGCTGGA+GGG | + | 10385:2723-2742 | MS.gene64058:intergenic | 55.0% | |
| TTCGGGTAGCTAACTGCTGG+AGG | + | 10385:2724-2743 | MS.gene64058:intergenic | 55.0% | |
| TTCTTCTCCGAAGGCGGTAG+TGG | - | 10385:1349-1368 | MS.gene64058:CDS | 55.0% | |
| ! | CAGTGCCGTTGGATCCCTTT+AGG | - | 10385:3166-3185 | MS.gene64058:CDS | 55.0% |
| ! | CATTTAGGGTCCCATCCACG+AGG | - | 10385:2841-2860 | MS.gene64058:intron | 55.0% |
| ! | GAAGGCATGTGGGGAAAGAC+TGG | + | 10385:3198-3217 | MS.gene64058:intergenic | 55.0% |
| ! | GCTTCAGATGGTGGCAATGC+AGG | - | 10385:1419-1438 | MS.gene64058:intron | 55.0% |
| ! | GTGCCGTTGGATCCCTTTAG+GGG | - | 10385:3168-3187 | MS.gene64058:CDS | 55.0% |
| ! | GTTGCAGGAGAAGGCATGTG+GGG | + | 10385:3207-3226 | MS.gene64058:intergenic | 55.0% |
| ! | TCAGATGGTGGCAATGCAGG+TGG | - | 10385:1422-1441 | MS.gene64058:intron | 55.0% |
| !! | ATTCCTCTGGGAGGCATCCT+TGG | + | 10385:2958-2977 | MS.gene64058:intergenic | 55.0% |
| !! | CTGTCATGGGTGCTGAATCG+TGG | - | 10385:1504-1523 | MS.gene64058:CDS | 55.0% |
| !! | TCTGGGAGGCATCCTTGGTT+GGG | + | 10385:2953-2972 | MS.gene64058:intergenic | 55.0% |
| ACAGGATAGGGAGGCAGTGG+TGG | + | 10385:2691-2710 | MS.gene64058:intergenic | 60.0% | |
| ATCTTCTCCGCTTCCGGCTC+CGG | - | 10385:1373-1392 | MS.gene64058:intron | 60.0% | |
| ATGCTCACGCACCCCAACCA+AGG | - | 10385:2938-2957 | MS.gene64058:intron | 60.0% | |
| CAACCAAGGATGCCTCCCAG+AGG | - | 10385:2952-2971 | MS.gene64058:intron | 60.0% | |
| CCATCAGCAGCAGCAGCAAC+AGG | + | 10385:1599-1618 | MS.gene64058:intergenic | 60.0% | |
| CCCTAAATGACCCCTGCGAG+AGG | + | 10385:2830-2849 | MS.gene64058:intergenic | 60.0% | |
| CCTGGATAAGCAACAGGGGC+TGG | + | 10385:3043-3062 | MS.gene64058:intergenic | 60.0% | |
| CCTGTTGCTGCTGCTGCTGA+TGG | - | 10385:1596-1615 | MS.gene64058:CDS | 60.0% | |
| CTGCCACCTATGCGCCTCAT+AGG | + | 10385:2616-2635 | MS.gene64058:intergenic | 60.0% | |
| GGAGAATCATCAGACGGCGG+AGG | + | 10385:1311-1330 | MS.gene64058:intergenic | 60.0% | |
| TGGTGGAGGAGTAGGAGGGT+TGG | + | 10385:2674-2693 | MS.gene64058:intergenic | 60.0% | |
| TGTAGGGGGTTCCTCTCGCA+GGG | - | 10385:2816-2835 | MS.gene64058:intron | 60.0% | |
| TTGTAGGGGGTTCCTCTCGC+AGG | - | 10385:2815-2834 | MS.gene64058:intron | 60.0% | |
| ! | AAGCTGCTCTGAGCAGGACC+AGG | + | 10385:2649-2668 | MS.gene64058:intergenic | 60.0% |
| ! | ATCAGACGGCGGAGGTTGGT+CGG | + | 10385:1303-1322 | MS.gene64058:intergenic | 60.0% |
| ! | CCAGCCCCTGTTGCTTATCC+AGG | - | 10385:3040-3059 | MS.gene64058:intron | 60.0% |
| ! | GCAGTGGTGGAGGAGTAGGA+GGG | + | 10385:2678-2697 | MS.gene64058:intergenic | 60.0% |
| !! | CTCTGGGAGGCATCCTTGGT+TGG | + | 10385:2954-2973 | MS.gene64058:intergenic | 60.0% |
| !! | CTGGGAGGCATCCTTGGTTG+GGG | + | 10385:2952-2971 | MS.gene64058:intergenic | 60.0% |
| AGGGGCTGGGAAGGGTCCAA+TGG | + | 10385:3029-3048 | MS.gene64058:intergenic | 65.0% | |
| GGATAGGGAGGCAGTGGTGG+AGG | + | 10385:2688-2707 | MS.gene64058:intergenic | 65.0% | |
| GGGTCCCATCCACGAGGAGA+TGG | - | 10385:2847-2866 | MS.gene64058:intron | 65.0% | |
| GTAGGGGGTTCCTCTCGCAG+GGG | - | 10385:2817-2836 | MS.gene64058:intron | 65.0% | |
| TTCTCCACCGGAGCCGGAAG+CGG | + | 10385:1383-1402 | MS.gene64058:intergenic | 65.0% | |
| ! | GGAGGCAGTGGTGGAGGAGT+AGG | + | 10385:2682-2701 | MS.gene64058:intergenic | 65.0% |
| ! | GGCAGTGGTGGAGGAGTAGG+AGG | + | 10385:2679-2698 | MS.gene64058:intergenic | 65.0% |
| TTCTCCGCTTCCGGCTCCGG+TGG | - | 10385:1376-1395 | MS.gene64058:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10385 | gene | 1296 | 3469 | 1296 | ID=MS.gene64058 |
| 10385 | mRNA | 1296 | 3469 | 1296 | ID=MS.gene64058.t1;Parent=MS.gene64058 |
| 10385 | exon | 3128 | 3469 | 3128 | ID=MS.gene64058.t1.exon1;Parent=MS.gene64058.t1 |
| 10385 | CDS | 3128 | 3469 | 3128 | ID=cds.MS.gene64058.t1;Parent=MS.gene64058.t1 |
| 10385 | exon | 1717 | 2245 | 1717 | ID=MS.gene64058.t1.exon2;Parent=MS.gene64058.t1 |
| 10385 | CDS | 1717 | 2245 | 1717 | ID=cds.MS.gene64058.t1;Parent=MS.gene64058.t1 |
| 10385 | exon | 1473 | 1617 | 1473 | ID=MS.gene64058.t1.exon3;Parent=MS.gene64058.t1 |
| 10385 | CDS | 1473 | 1617 | 1473 | ID=cds.MS.gene64058.t1;Parent=MS.gene64058.t1 |
| 10385 | exon | 1296 | 1386 | 1296 | ID=MS.gene64058.t1.exon4;Parent=MS.gene64058.t1 |
| 10385 | CDS | 1296 | 1386 | 1296 | ID=cds.MS.gene64058.t1;Parent=MS.gene64058.t1 |
| Gene Sequence |
| Protein sequence |
