AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene64152

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64152.t1 MTR_1g069110 50.000 468 179 7 5 451 7 440 1.23e-156 452
MS.gene64152.t1 MTR_7g099560 66.393 244 23 4 208 450 1 186 7.00e-101 301
MS.gene64152.t1 MTR_7g099570 59.474 190 76 1 258 446 400 589 2.46e-76 250
MS.gene64152.t1 MTR_7g099570 50.781 256 115 5 8 254 1 254 2.70e-66 223
MS.gene64152.t1 MTR_7g099580 41.088 331 135 9 8 328 4 284 1.95e-69 224
MS.gene64152.t1 MTR_7g099550 83.193 119 14 1 57 175 127 239 1.12e-62 203
MS.gene64152.t1 MTR_7g087540 38.043 184 91 4 270 449 16 180 1.06e-33 125
MS.gene64152.t1 MTR_8g069880 25.532 470 281 17 11 450 5 435 3.23e-33 130
MS.gene64152.t1 MTR_8g073260 28.080 349 224 8 7 342 2 336 2.60e-31 125
MS.gene64152.t1 MTR_8g467780 26.316 456 269 15 30 454 28 447 1.27e-30 123
MS.gene64152.t1 MTR_8g068990 28.212 358 210 12 32 371 31 359 1.34e-30 123
MS.gene64152.t1 MTR_7g099600 60.920 87 34 0 350 436 1 87 2.97e-30 112
MS.gene64152.t1 MTR_8g066670 24.890 454 281 14 9 446 1080 1489 4.47e-30 124
MS.gene64152.t1 MTR_1g115575 25.949 474 277 16 15 453 134 568 2.83e-29 120
MS.gene64152.t1 MTR_8g019290 37.805 164 96 1 281 444 8 165 1.21e-28 111
MS.gene64152.t1 MTR_8g019260 37.654 162 99 2 281 440 7 168 1.35e-28 111
MS.gene64152.t1 MTR_8g019110 37.654 162 99 2 281 440 7 168 1.35e-28 111
MS.gene64152.t1 MTR_8g072510 27.298 359 223 11 32 371 29 368 2.13e-28 117
MS.gene64152.t1 MTR_7g021090 26.415 371 227 12 23 371 16 362 6.60e-28 115
MS.gene64152.t1 MTR_7g087560 38.983 177 71 6 274 448 21 162 8.31e-28 108
MS.gene64152.t1 MTR_3g016210 29.375 320 193 8 32 330 29 336 1.77e-27 114
MS.gene64152.t1 MTR_0514s0010 32.569 218 119 5 256 445 10 227 2.66e-26 107
MS.gene64152.t1 MTR_0470s0020 32.110 218 120 5 256 445 8 225 2.83e-26 107
MS.gene64152.t1 MTR_8g019050 32.110 218 120 5 256 445 8 225 2.83e-26 107
MS.gene64152.t1 MTR_7g451420 29.846 325 192 11 11 318 7 312 4.48e-26 108
MS.gene64152.t1 MTR_8g039620 26.913 379 245 11 11 370 9 374 4.83e-26 110
MS.gene64152.t1 MTR_0470s0010 35.294 170 96 5 281 440 10 175 1.19e-25 103
MS.gene64152.t1 MTR_8g019020 35.294 170 96 5 281 440 10 175 1.19e-25 103
MS.gene64152.t1 MTR_7g117620 25.700 393 224 10 45 401 116 476 1.22e-24 107
MS.gene64152.t1 MTR_1g059930 29.293 297 186 8 32 317 31 314 1.96e-24 105
MS.gene64152.t1 MTR_8g040930 25.464 377 235 13 56 412 2 352 2.02e-24 104
MS.gene64152.t1 MTR_8g041240 25.464 377 235 13 56 412 2 352 2.02e-24 104
MS.gene64152.t1 MTR_2g101320 32.057 209 137 4 44 251 137 341 3.40e-24 106
MS.gene64152.t1 MTR_8g019450 29.832 238 133 6 251 455 3 239 4.16e-24 101
MS.gene64152.t1 MTR_8g018980 30.472 233 129 6 256 455 8 240 4.74e-24 100
MS.gene64152.t1 MTR_8g019380 30.374 214 124 6 256 445 8 220 4.77e-23 98.6
MS.gene64152.t1 MTR_8g019280 40.426 141 78 1 304 444 1 135 6.19e-23 95.1
MS.gene64152.t1 MTR_7g055630 35.185 162 97 4 286 440 14 174 6.59e-23 95.9
MS.gene64152.t1 MTR_3g105650 23.020 404 262 11 23 413 12 379 7.91e-23 100
MS.gene64152.t1 MTR_2g096190 25.862 290 185 6 45 314 101 380 9.67e-23 101
MS.gene64152.t1 MTR_2g101310 32.057 209 137 4 44 251 137 341 6.84e-22 99.0
MS.gene64152.t1 MTR_2g101310 23.185 427 231 12 45 409 172 563 5.91e-13 71.2
MS.gene64152.t1 MTR_4g062100 23.724 392 238 10 45 401 105 470 6.91e-22 98.6
MS.gene64152.t1 MTR_8g062410 25.126 398 250 11 32 412 29 395 7.58e-22 98.2
MS.gene64152.t1 MTR_2g101310 32.057 209 137 4 44 251 137 341 2.11e-21 97.1
MS.gene64152.t1 MTR_7g100390 23.272 434 277 13 1 401 38 448 1.88e-20 94.4
MS.gene64152.t1 MTR_7g100430 27.500 320 205 10 15 315 126 437 1.68e-19 91.7
MS.gene64152.t1 MTR_8g019060 29.224 219 140 3 240 445 35 251 5.37e-19 89.4
MS.gene64152.t1 MTR_8g019060 33.333 186 108 8 274 448 266 446 1.02e-15 79.3
MS.gene64152.t1 MTR_1g032100 24.603 378 239 10 16 371 60 413 6.12e-17 83.6
MS.gene64152.t1 MTR_8g019440 34.969 163 97 3 291 445 2 163 1.38e-16 78.2
MS.gene64152.t1 MTR_8g105260 23.380 432 254 13 48 444 101 490 8.18e-16 80.1
MS.gene64152.t1 MTR_2g033050 29.224 219 142 7 16 226 169 382 2.43e-15 78.2
MS.gene64152.t1 MTR_5g085500 29.630 162 111 2 75 233 1 162 2.52e-13 72.0
MS.gene64152.t1 MTR_5g085480 23.393 389 229 11 16 357 54 420 1.40e-12 70.1
MS.gene64152.t1 MTR_3g085830 28.505 214 135 7 49 248 186 395 1.44e-12 70.1
MS.gene64152.t1 MTR_5g085480 23.393 389 229 11 16 357 214 580 2.01e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64152.t1 AT4G10720 27.907 430 270 12 32 451 24 423 7.38e-42 154
MS.gene64152.t1 AT5G51160 31.755 359 214 13 74 412 42 389 2.30e-39 147
MS.gene64152.t1 AT4G10720 26.977 430 241 11 32 451 24 390 7.75e-36 137
MS.gene64152.t1 AT1G14500 26.420 405 252 9 24 414 16 388 2.55e-35 136
MS.gene64152.t1 AT1G14480 27.373 453 275 14 16 450 5 421 6.26e-33 129
MS.gene64152.t1 AT5G15500 27.742 465 269 20 14 452 4 427 1.39e-30 123
MS.gene64152.t1 AT3G13950 40.341 176 93 4 278 446 21 191 3.42e-30 116
MS.gene64152.t1 AT4G13266 35.938 192 113 6 260 446 8 194 1.72e-28 112
MS.gene64152.t1 AT5G54620 25.376 465 270 16 14 453 3 415 4.70e-28 115
MS.gene64152.t1 AT1G14480 25.901 444 250 13 16 450 5 378 2.57e-26 110
MS.gene64152.t1 AT5G54700 25.407 307 175 9 110 411 28 285 1.54e-25 107
MS.gene64152.t1 AT1G34050 24.931 361 243 9 57 409 162 502 1.73e-24 106
MS.gene64152.t1 AT2G31820 26.097 433 248 13 7 401 186 584 3.43e-24 106
MS.gene64152.t1 AT3G12360 26.340 429 253 15 15 408 132 532 7.96e-24 104
MS.gene64152.t1 AT3G12360 26.340 429 253 15 15 408 120 520 8.11e-24 104
MS.gene64152.t1 AT5G54710 26.087 368 231 11 64 409 227 575 8.32e-24 105
MS.gene64152.t1 AT5G54710 26.158 367 230 11 65 409 183 530 9.43e-24 104
MS.gene64152.t1 AT5G54700 23.497 366 189 11 45 405 37 316 2.36e-23 102
MS.gene64152.t1 AT5G54610 24.682 393 247 13 24 401 16 374 1.10e-22 100
MS.gene64152.t1 AT5G60070 25.497 302 184 6 45 319 108 395 1.69e-22 100
MS.gene64152.t1 AT3G09550 25.060 415 253 14 16 401 147 532 5.47e-21 96.3
MS.gene64152.t1 AT3G09550 25.060 415 253 14 16 401 147 532 5.47e-21 96.3
MS.gene64152.t1 AT3G09550 25.060 415 253 14 16 401 154 539 5.60e-21 96.3
MS.gene64152.t1 AT1G05640 25.747 435 262 17 1 401 142 549 7.19e-21 95.9
MS.gene64152.t1 AT5G50140 28.745 247 151 7 44 274 26 263 5.94e-20 92.8
MS.gene64152.t1 AT4G03440 23.786 412 269 9 11 404 271 655 6.47e-19 90.1
MS.gene64152.t1 AT4G03440 23.786 412 269 9 11 404 264 648 7.35e-19 90.1
MS.gene64152.t1 AT4G03440 23.786 412 269 9 11 404 264 648 7.35e-19 90.1
MS.gene64152.t1 AT2G01680 25.439 342 215 11 48 371 97 416 8.12e-19 89.4
MS.gene64152.t1 AT2G24600 24.074 432 249 16 47 451 173 552 1.18e-18 89.0
MS.gene64152.t1 AT2G24600 28.788 198 123 5 47 236 39 226 3.78e-11 65.9
MS.gene64152.t1 AT2G24600 24.074 432 249 16 47 451 173 552 1.18e-18 89.0
MS.gene64152.t1 AT2G24600 28.788 198 123 5 47 236 39 226 3.78e-11 65.9
MS.gene64152.t1 AT4G03500 24.939 409 248 12 11 401 191 558 1.54e-17 85.9
MS.gene64152.t1 AT4G03500 24.939 409 248 12 11 401 191 558 1.54e-17 85.9
MS.gene64152.t1 AT4G03500 24.939 409 248 12 11 401 214 581 1.66e-17 85.5
MS.gene64152.t1 AT5G02620 23.500 400 247 11 35 401 86 459 1.83e-17 85.1
MS.gene64152.t1 AT5G02620 23.500 400 247 11 35 401 86 459 1.83e-17 85.1
MS.gene64152.t1 AT5G02620 23.500 400 247 11 35 401 86 459 1.83e-17 85.1
MS.gene64152.t1 AT5G02620 23.515 421 244 13 35 401 86 482 1.23e-15 79.7
MS.gene64152.t1 AT5G02620 27.835 194 131 5 45 235 56 243 6.60e-15 77.4
MS.gene64152.t1 AT5G02620 23.515 421 244 13 35 401 86 482 1.23e-15 79.7
MS.gene64152.t1 AT5G02620 27.835 194 131 5 45 235 56 243 6.60e-15 77.4
MS.gene64152.t1 AT4G03480 25.758 330 219 7 11 327 311 627 1.91e-15 79.3
MS.gene64152.t1 AT4G03480 25.758 330 219 7 11 327 314 630 2.02e-15 79.3
MS.gene64152.t1 AT4G05040 27.798 277 164 9 63 330 291 540 5.43e-15 77.8
MS.gene64152.t1 AT4G05040 27.798 277 164 9 63 330 291 540 5.43e-15 77.8
MS.gene64152.t1 AT4G05040 27.798 277 164 9 63 330 291 540 5.43e-15 77.8
MS.gene64152.t1 AT4G05040 27.798 277 164 9 63 330 291 540 5.43e-15 77.8
MS.gene64152.t1 AT4G05040 27.798 277 164 9 63 330 291 540 5.43e-15 77.8
MS.gene64152.t1 AT4G05040 27.798 277 164 9 63 330 291 540 5.43e-15 77.8
MS.gene64152.t1 AT4G05040 27.798 277 164 9 63 330 291 540 5.43e-15 77.8
MS.gene64152.t1 AT1G07710 28.177 181 124 3 45 224 101 276 6.61e-15 77.4
MS.gene64152.t1 AT1G07710 28.177 181 124 3 45 224 101 276 6.61e-15 77.4
MS.gene64152.t1 AT4G03460 25.000 276 181 6 45 315 200 454 1.33e-13 73.6
MS.gene64152.t1 AT4G03450 25.203 369 235 12 13 371 188 525 1.60e-13 73.2
MS.gene64152.t1 AT4G03450 24.932 369 236 11 13 371 188 525 1.62e-13 73.2
MS.gene64152.t1 AT4G03460 25.000 276 181 6 45 315 232 486 1.98e-13 72.8
MS.gene64152.t1 AT1G03670 23.860 285 195 7 45 324 215 482 3.82e-13 72.0
MS.gene64152.t1 AT4G03470 22.826 368 226 12 63 417 288 610 6.36e-13 71.2
MS.gene64152.t1 AT4G03490 24.444 315 210 9 8 315 174 467 6.42e-13 71.2
MS.gene64152.t1 AT4G03490 24.444 315 210 9 8 315 164 457 7.37e-13 71.2
MS.gene64152.t1 AT4G03490 24.444 315 210 9 8 315 174 467 1.84e-12 70.1
MS.gene64152.t1 AT5G15500 26.389 360 201 19 116 452 3 321 1.19e-11 66.2
MS.gene64152.t1 AT2G24600 24.679 312 173 12 47 331 173 449 3.54e-11 65.9
MS.gene64152.t1 AT2G24600 28.788 198 123 5 47 236 39 226 5.17e-11 65.1
MS.gene64152.t1 AT2G24600 24.679 312 173 12 47 331 173 449 3.54e-11 65.9
MS.gene64152.t1 AT2G24600 28.788 198 123 5 47 236 39 226 5.17e-11 65.1
MS.gene64152.t1 AT3G04140 24.904 261 171 9 10 247 150 408 4.25e-11 65.5
MS.gene64152.t1 AT1G10340 27.803 223 135 5 13 225 1 207 9.72e-11 64.3

Find 90 sgRNAs with CRISPR-Local

Find 201 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGGAATCAAACAAATATT+TGG 0.135936 7.4:+10785142 None:intergenic
ACATACAACATCAAGGTAAT+TGG 0.243516 7.4:-10782440 MS.gene64152:CDS
TGGCTTTCCACTTAAGAATA+AGG 0.252332 7.4:-10782160 MS.gene64152:CDS
ATATTTATTATGATGCTTAT+AGG 0.255392 7.4:-10782044 MS.gene64152:CDS
ACCGTATCATCCTCAAAATT+TGG 0.256367 7.4:+10785433 None:intergenic
GTTTGCTGCTGTTCTCATTT+GGG 0.259376 7.4:+10782659 None:intergenic
TGTTTGCTGCTGTTCTCATT+TGG 0.268583 7.4:+10782658 None:intergenic
CTGCTTCAATTAAAATGTAT+TGG 0.303779 7.4:+10782559 None:intergenic
CTCTATGAAGCAATAATAAA+TGG 0.310501 7.4:-10785403 MS.gene64152:CDS
TATTATGATGCTTATAGGTT+AGG 0.311967 7.4:-10782039 MS.gene64152:CDS
CCATGTTCATTTCAAAAGAT+TGG 0.329379 7.4:-10785040 MS.gene64152:CDS
AAACTTTCATTCTCTCCATT+TGG 0.344078 7.4:-10785337 MS.gene64152:CDS
TTTAGAAATAAGCTTATGTT+TGG 0.344450 7.4:+10781917 None:intergenic
TAAACCCACCAGGTGGAGTT+TGG 0.353890 7.4:-10782347 MS.gene64152:CDS
TTACACATAGCCTCTTTGTT+TGG 0.359073 7.4:-10785304 MS.gene64152:CDS
TTGCTTTGATTCAAATTGTA+AGG 0.364537 7.4:-10781975 MS.gene64152:CDS
GCATACACTTGCACTACTTA+TGG 0.367151 7.4:-10782303 MS.gene64152:CDS
AAATGTCATGGTTGCAATTA+CGG 0.373717 7.4:+10782380 None:intergenic
TGACAAACTTCCTATACATT+TGG 0.387355 7.4:-10785113 MS.gene64152:CDS
CTTACTTATATGTGGGCCAT+TGG 0.389989 7.4:-10782084 MS.gene64152:CDS
CCTATACATTTGGCCGTGTC+AGG 0.392164 7.4:-10785103 MS.gene64152:CDS
ATTATGATGCTTATAGGTTA+GGG 0.396447 7.4:-10782038 MS.gene64152:CDS
ATTATAACCTTATTCTTAAG+TGG 0.396616 7.4:+10782153 None:intergenic
TTTCAAAAGATTGGTGATGA+TGG 0.401576 7.4:-10785031 MS.gene64152:CDS
TTATGTTGCTTACTTATATG+TGG 0.403932 7.4:-10782092 MS.gene64152:CDS
AGGGTAACACGATTCTTCAT+TGG 0.409958 7.4:-10784904 MS.gene64152:CDS
AGAGAATGAAAGTTTGCTTA+AGG 0.410698 7.4:+10785345 None:intergenic
GAAAGTTTGCTTAAGGTAAG+AGG 0.412128 7.4:+10785352 None:intergenic
CCTGACACGGCCAAATGTAT+AGG 0.414312 7.4:+10785103 None:intergenic
CTTCATTTGGCTTCAGCTGA+AGG 0.425245 7.4:-10785202 MS.gene64152:CDS
AGGTCGTTACCCTCTTCATT+TGG 0.431625 7.4:-10785215 MS.gene64152:CDS
TAACAAGGGTCTCACACCTT+TGG 0.432666 7.4:-10782628 MS.gene64152:CDS
ACTTATGGTATTTGCAAAGC+TGG 0.447230 7.4:-10782288 MS.gene64152:CDS
GGATTGCACTATGCATTTCA+AGG 0.449153 7.4:+10784967 None:intergenic
GGGTAACACGATTCTTCATT+GGG 0.460011 7.4:-10784903 MS.gene64152:CDS
AGGAAGTTTGTCATCATTGT+CGG 0.460716 7.4:+10785123 None:intergenic
TCCACTTCACTAGCTAAACT+TGG 0.461505 7.4:+10785244 None:intergenic
AGGTTAGGGTTTCTATTAAG+TGG 0.462978 7.4:-10782024 MS.gene64152:CDS
TATGTTGCTTACTTATATGT+GGG 0.474110 7.4:-10782091 MS.gene64152:CDS
GTTGTGTTGATTCTTGTTTG+TGG 0.477030 7.4:-10782180 MS.gene64152:CDS
AGTTAACCTCAAGCAAATTC+AGG 0.477234 7.4:-10784879 MS.gene64152:intron
AACACAAAGTGAAGCAAAGA+AGG 0.480222 7.4:+10782200 None:intergenic
CTGCAGTTGTTGGATATGAT+TGG 0.483697 7.4:-10782263 MS.gene64152:CDS
GTTTCTATTAAGTGGTGCGT+GGG 0.484447 7.4:-10782016 MS.gene64152:CDS
GGAAGTTTGTCATCATTGTC+GGG 0.484685 7.4:+10785124 None:intergenic
TTATATGTGGGCCATTGGAT+TGG 0.486598 7.4:-10782079 MS.gene64152:CDS
TGTAATGGTGTTTCACCAAA+TGG 0.488071 7.4:+10785322 None:intergenic
TCAACTCCTCAACAACCTCC+AGG 0.493021 7.4:+10785074 None:intergenic
TTTGCTGCTGTTCTCATTTG+GGG 0.499629 7.4:+10782660 None:intergenic
GGCCGTGTCAGGAGGACACC+TGG 0.505191 7.4:-10785092 MS.gene64152:CDS
GCCATTGGATTGGTTACACC+TGG 0.507017 7.4:-10782069 MS.gene64152:CDS
CTTGCCAAACTCCACCTGGT+GGG 0.512301 7.4:+10782343 None:intergenic
TTCAAAAGATTGGTGATGAT+GGG 0.513346 7.4:-10785030 MS.gene64152:CDS
AAAGCTGGAACTGCAGTTGT+TGG 0.521999 7.4:-10782273 MS.gene64152:CDS
GCTAGTGAAGTGGACTCAAA+AGG 0.523675 7.4:-10785235 MS.gene64152:CDS
AACAAAGAGGCTATGTGTAA+TGG 0.532105 7.4:+10785307 None:intergenic
TCTTGCCAAACTCCACCTGG+TGG 0.548039 7.4:+10782342 None:intergenic
TGCATTTCAAGGCCTCAAGA+TGG 0.554573 7.4:+10784978 None:intergenic
CAATCAGCATTAAACCCACC+AGG 0.558098 7.4:-10782357 MS.gene64152:CDS
TCAAAATACATACAACATCA+AGG 0.559123 7.4:-10782447 MS.gene64152:CDS
TCCAAGTTTAGCTAGTGAAG+TGG 0.563812 7.4:-10785245 MS.gene64152:CDS
AGGACACCTGGAGGTTGTTG+AGG 0.565708 7.4:-10785080 MS.gene64152:CDS
CAGCTCTTGTGCTCCACTCA+CGG 0.566918 7.4:+10784946 None:intergenic
TAATGCTGATTGAAATGTCA+TGG 0.571001 7.4:+10782368 None:intergenic
GGTTTCTATTAAGTGGTGCG+TGG 0.575929 7.4:-10782017 MS.gene64152:CDS
TGAATACCTGAATTTGCTTG+AGG 0.576176 7.4:+10784873 None:intergenic
TGGCAAGAAAATACACATAG+TGG 0.580636 7.4:-10782327 MS.gene64152:CDS
CTCCAGGTGTCCTCCTGACA+CGG 0.593297 7.4:+10785090 None:intergenic
CAGCTGAAGCCAAATGAAGA+GGG 0.598579 7.4:+10785206 None:intergenic
AGCAAACACTTTGAATAACA+AGG 0.607273 7.4:-10782643 MS.gene64152:CDS
CTCTAAATATCCAAACAAAG+AGG 0.608525 7.4:+10785294 None:intergenic
TGCATAGTGCAATCCGTGAG+TGG 0.615748 7.4:-10784959 MS.gene64152:CDS
ACCAGGTGTAACCAATCCAA+TGG 0.618579 7.4:+10782068 None:intergenic
ATACATTTGGCCGTGTCAGG+AGG 0.620224 7.4:-10785100 MS.gene64152:CDS
TCAGCTGAAGCCAAATGAAG+AGG 0.621530 7.4:+10785205 None:intergenic
AACTATTGCAATGACCATTG+CGG 0.626441 7.4:-10782121 MS.gene64152:CDS
GCATCATAATAAATATGACC+AGG 0.638930 7.4:+10782051 None:intergenic
TTAAGAATAAGGTTATAATG+TGG 0.640084 7.4:-10782149 MS.gene64152:CDS
CAACATAAAAGTAACCGCAA+TGG 0.641263 7.4:+10782107 None:intergenic
CGGTTGTTCAATATATCCAA+AGG 0.643892 7.4:+10782612 None:intergenic
TTTCTATTAAGTGGTGCGTG+GGG 0.654362 7.4:-10782015 MS.gene64152:CDS
GCTGTTGCATGTTCAAGACA+AGG 0.657457 7.4:-10784927 MS.gene64152:CDS
GCAAACACTTTGAATAACAA+GGG 0.663159 7.4:-10782642 MS.gene64152:CDS
TGTTAGATATAACCATCTTG+AGG 0.666442 7.4:-10784990 MS.gene64152:CDS
TTGCATGTTCAAGACAAGGA+GGG 0.685723 7.4:-10784923 MS.gene64152:CDS
GTTGCATGTTCAAGACAAGG+AGG 0.687239 7.4:-10784924 MS.gene64152:CDS
CGTGTCAGGAGGACACCTGG+AGG 0.692858 7.4:-10785089 MS.gene64152:CDS
CTATGAAATCTGCTTGAGAG+CGG 0.704328 7.4:+10782592 None:intergenic
TCAGCATTAAACCCACCAGG+TGG 0.719416 7.4:-10782354 MS.gene64152:CDS
AATTGGATAGAAGAGACACG+TGG 0.809348 7.4:-10782423 MS.gene64152:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAATTAATTATTTTTTTA+GGG - chr7.4:10783659-10783678 MS.gene64152:intron 0.0%
!! AAAATGTATAATAAAATGTA+AGG + chr7.4:10782564-10782583 None:intergenic 10.0%
!! ATAGAAAGAAAAAAAAAATA+TGG + chr7.4:10783495-10783514 None:intergenic 10.0%
!!! TATTGACTTTATTTTTTTTA+TGG - chr7.4:10783909-10783928 MS.gene64152:intron 10.0%
!!! TGTTCTTTATTTATTTATTT+TGG - chr7.4:10783442-10783461 MS.gene64152:intron 10.0%
!! AAAGAAAAAAAAAATATGGT+AGG + chr7.4:10783491-10783510 None:intergenic 15.0%
!! AAGAAGATATTAAATGAATA+AGG - chr7.4:10784381-10784400 MS.gene64152:intron 15.0%
!! ACAAAAGAAATATTAAAAGT+AGG - chr7.4:10783008-10783027 MS.gene64152:intron 15.0%
!! ATAGAATTTATAGAAAAGTT+GGG - chr7.4:10783064-10783083 MS.gene64152:intron 15.0%
!! ATATTTATTATGATGCTTAT+AGG - chr7.4:10785334-10785353 MS.gene64152:CDS 15.0%
!! CAAAAGAAATATTAAAAGTA+GGG - chr7.4:10783009-10783028 MS.gene64152:intron 15.0%
!! TATAGAATTTATAGAAAAGT+TGG - chr7.4:10783063-10783082 MS.gene64152:intron 15.0%
!! TTTAATGCAACATTAATTAT+TGG + chr7.4:10784182-10784201 None:intergenic 15.0%
!!! AAAACATTTATTTGATTTCT+TGG + chr7.4:10784059-10784078 None:intergenic 15.0%
!!! GTAACATTTATTTATTGTTT+TGG - chr7.4:10784442-10784461 MS.gene64152:intron 15.0%
!! AAAGAGAAGATTAATTCAAA+AGG - chr7.4:10782738-10782757 MS.gene64152:intron 20.0%
!! AATAGTAACCAATAAAAATG+TGG + chr7.4:10782537-10782556 None:intergenic 20.0%
!! AATCCAATACATTGAAAAAT+TGG - chr7.4:10784896-10784915 MS.gene64152:CDS 20.0%
!! ACCTAAACCAAAAATTTATA+GGG - chr7.4:10783367-10783386 MS.gene64152:intron 20.0%
!! ATACACGTAATATAAACTAA+AGG - chr7.4:10783959-10783978 MS.gene64152:intron 20.0%
!! ATATCTATTCCACAAATATT+TGG + chr7.4:10782863-10782882 None:intergenic 20.0%
!! ATCCAATACATTGAAAAATT+GGG - chr7.4:10784897-10784916 MS.gene64152:CDS 20.0%
!! ATTAATGTTGCATTAAAACT+TGG - chr7.4:10784185-10784204 MS.gene64152:intron 20.0%
!! ATTATAACCTTATTCTTAAG+TGG + chr7.4:10785228-10785247 None:intergenic 20.0%
!! GATATTAAACAGTTTCAAAA+AGG - chr7.4:10782878-10782897 MS.gene64152:intron 20.0%
!! TAAATAACTAAGGGTAATAA+TGG + chr7.4:10784339-10784358 None:intergenic 20.0%
!! TAAGAGAAGTTAATTATATG+TGG + chr7.4:10783642-10783661 None:intergenic 20.0%
!! TACACGTAATATAAACTAAA+GGG - chr7.4:10783960-10783979 MS.gene64152:intron 20.0%
!! TACCTAAACCAAAAATTTAT+AGG - chr7.4:10783366-10783385 MS.gene64152:intron 20.0%
!! TAGAATTTATAGAAAAGTTG+GGG - chr7.4:10783065-10783084 MS.gene64152:intron 20.0%
!! TATCTACAATAAATAGATAG+AGG - chr7.4:10784143-10784162 MS.gene64152:intron 20.0%
!! TATGTGTAATTTCTTCAAAA+TGG + chr7.4:10784036-10784055 None:intergenic 20.0%
!! TCAAAATGTGACAATTAAAA+AGG - chr7.4:10784478-10784497 MS.gene64152:intron 20.0%
!! TTAAATGAATAAGGTCATTA+TGG - chr7.4:10784390-10784409 MS.gene64152:intron 20.0%
!! TTAAGAATAAGGTTATAATG+TGG - chr7.4:10785229-10785248 MS.gene64152:CDS 20.0%
!!! AAATTGTAAGGTTTGTTTTT+TGG - chr7.4:10785415-10785434 MS.gene64152:CDS 20.0%
!!! AATAACCCACATATTTTTTA+AGG - chr7.4:10782794-10782813 MS.gene64152:intron 20.0%
!!! AATACATTTTAATTGAAGCA+GGG - chr7.4:10784821-10784840 MS.gene64152:intron 20.0%
!!! ATCAAAATTATGATTTGTTG+TGG - chr7.4:10782901-10782920 MS.gene64152:intron 20.0%
!!! ATCAGCTTCTAATTTTAATA+AGG + chr7.4:10782671-10782690 None:intergenic 20.0%
!!! CAACAACTTTTCTATTAAAT+AGG - chr7.4:10783522-10783541 MS.gene64152:intron 20.0%
! AGAATTTATAGAAAAGTTGG+GGG - chr7.4:10783066-10783085 MS.gene64152:intron 25.0%
! ATACTGAGTTATACATCATT+TGG + chr7.4:10783556-10783575 None:intergenic 25.0%
! ATGTGACAATTAAAAAGGAA+CGG - chr7.4:10784483-10784502 MS.gene64152:intron 25.0%
! ATTATGATGCTTATAGGTTA+GGG - chr7.4:10785340-10785359 MS.gene64152:CDS 25.0%
! CTCTATGAAGCAATAATAAA+TGG - chr7.4:10781975-10781994 MS.gene64152:CDS 25.0%
! CTGCTTCAATTAAAATGTAT+TGG + chr7.4:10784822-10784841 None:intergenic 25.0%
! TAAACCAAAAATTTATAGGG+AGG - chr7.4:10783370-10783389 MS.gene64152:intron 25.0%
! TAAACCAAAGATTTATAGAG+AGG - chr7.4:10783297-10783316 MS.gene64152:intron 25.0%
! TAACCAATAAAAATGTGGTA+AGG + chr7.4:10782532-10782551 None:intergenic 25.0%
! TATTATGATGCTTATAGGTT+AGG - chr7.4:10785339-10785358 MS.gene64152:CDS 25.0%
! TCAAAATACATACAACATCA+AGG - chr7.4:10784931-10784950 MS.gene64152:CDS 25.0%
! TCTAAAAGTGACACTTATAA+AGG + chr7.4:10784252-10784271 None:intergenic 25.0%
! TCTCCACAATAAATAACTAA+GGG + chr7.4:10784348-10784367 None:intergenic 25.0%
! TGCTTCCTTAAAAAATATGT+GGG + chr7.4:10782802-10782821 None:intergenic 25.0%
! TTACCCTTAGTTATTTATTG+TGG - chr7.4:10784342-10784361 MS.gene64152:intron 25.0%
! TTGCTTCCTTAAAAAATATG+TGG + chr7.4:10782803-10782822 None:intergenic 25.0%
! TTGCTTTGATTCAAATTGTA+AGG - chr7.4:10785403-10785422 MS.gene64152:CDS 25.0%
! TTTGCTTAATTGTAACATAG+AGG - chr7.4:10782931-10782950 MS.gene64152:intron 25.0%
!! AAAATGGATAAGTATTGTGA+TGG - chr7.4:10784519-10784538 MS.gene64152:intron 25.0%
!! AGTATAAGTTTAGAATGTTG+AGG + chr7.4:10783710-10783729 None:intergenic 25.0%
!! GTATAAGTTTAGAATGTTGA+GGG + chr7.4:10783709-10783728 None:intergenic 25.0%
!! TATGTTGCTTACTTATATGT+GGG - chr7.4:10785287-10785306 MS.gene64152:CDS 25.0%
!! TCTCTATAAATCTTTGGTTT+AGG + chr7.4:10783298-10783317 None:intergenic 25.0%
!! TTATGTTGCTTACTTATATG+TGG - chr7.4:10785286-10785305 MS.gene64152:CDS 25.0%
!!! AAAATTATGATTTGTTGTGG+TGG - chr7.4:10782904-10782923 MS.gene64152:intron 25.0%
!!! AAGAGGATTTAGTTTTTGTA+AGG + chr7.4:10782012-10782031 None:intergenic 25.0%
!!! ATACATTTTAATTGAAGCAG+GGG - chr7.4:10784822-10784841 MS.gene64152:intron 25.0%
!!! ATTTTTGGTTTAGGTAGAAT+TGG + chr7.4:10783362-10783381 None:intergenic 25.0%
!!! CAATACATTTTAATTGAAGC+AGG - chr7.4:10784820-10784839 MS.gene64152:intron 25.0%
!!! TAAGGTTTGTTTTTTGGATA+AGG - chr7.4:10785421-10785440 MS.gene64152:CDS 25.0%
!!! TCCCTATAAATTTTTGGTTT+AGG + chr7.4:10783371-10783390 None:intergenic 25.0%
AAACTTTCATTCTCTCCATT+TGG - chr7.4:10782041-10782060 MS.gene64152:CDS 30.0%
AAATGTCATGGTTGCAATTA+CGG + chr7.4:10785001-10785020 None:intergenic 30.0%
AAGTGACACTTATAAAGGAA+CGG + chr7.4:10784247-10784266 None:intergenic 30.0%
AATCTTAAACAAGCAGACTT+AGG - chr7.4:10783192-10783211 MS.gene64152:intron 30.0%
AATTGTAACATAGAGGATTG+CGG - chr7.4:10782938-10782957 MS.gene64152:intron 30.0%
ACATACAACATCAAGGTAAT+TGG - chr7.4:10784938-10784957 MS.gene64152:CDS 30.0%
AGCAAACACTTTGAATAACA+AGG - chr7.4:10784735-10784754 MS.gene64152:intron 30.0%
ATCTTAAACAAGCAGACTTA+GGG - chr7.4:10783193-10783212 MS.gene64152:intron 30.0%
ATTAAAAAAGACGTACCTAG+TGG + chr7.4:10782974-10782993 None:intergenic 30.0%
CCATGTTCATTTCAAAAGAT+TGG - chr7.4:10782338-10782357 MS.gene64152:CDS 30.0%
CTCTAAATATCCAAACAAAG+AGG + chr7.4:10782087-10782106 None:intergenic 30.0%
CTCTCCACAATAAATAACTA+AGG + chr7.4:10784349-10784368 None:intergenic 30.0%
GCAAACACTTTGAATAACAA+GGG - chr7.4:10784736-10784755 MS.gene64152:intron 30.0%
GCATCATAATAAATATGACC+AGG + chr7.4:10785330-10785349 None:intergenic 30.0%
GTGACACTCAATAAAATGAA+AGG + chr7.4:10783766-10783785 None:intergenic 30.0%
TATTTGTAGTGACCTTAATG+TGG + chr7.4:10783134-10783153 None:intergenic 30.0%
TCGGGAATCAAACAAATATT+TGG + chr7.4:10782239-10782258 None:intergenic 30.0%
TGACAAACTTCCTATACATT+TGG - chr7.4:10782265-10782284 MS.gene64152:CDS 30.0%
TGACATTCATAATGAGATTC+AGG - chr7.4:10784585-10784604 MS.gene64152:intron 30.0%
TGTGACAATTAAAAAGGAAC+GGG - chr7.4:10784484-10784503 MS.gene64152:intron 30.0%
TGTTAGATATAACCATCTTG+AGG - chr7.4:10782388-10782407 MS.gene64152:CDS 30.0%
! AAGCGAAAGCAAGAATTTTA+TGG + chr7.4:10784698-10784717 None:intergenic 30.0%
! AGAGAATGAAAGTTTGCTTA+AGG + chr7.4:10782036-10782055 None:intergenic 30.0%
! AGAGTTATCTCCAAATTTTG+AGG - chr7.4:10781935-10781954 MS.gene64152:CDS 30.0%
! ATCTTTGGTTTAGGTAGAAT+TGG + chr7.4:10783289-10783308 None:intergenic 30.0%
! CAACCTTACCACATTTTTAT+TGG - chr7.4:10782526-10782545 MS.gene64152:CDS 30.0%
! TAATGCTGATTGAAATGTCA+TGG + chr7.4:10785013-10785032 None:intergenic 30.0%
! TACACCTCCCTATAAATTTT+TGG + chr7.4:10783377-10783396 None:intergenic 30.0%
!! CTCCCAATTTTTCAATGTAT+TGG + chr7.4:10784902-10784921 None:intergenic 30.0%
!! TCCAAATTTTGAGGATGATA+CGG - chr7.4:10781944-10781963 MS.gene64152:CDS 30.0%
!! TGATCCTGAATTGATTTGTT+GGG - chr7.4:10782833-10782852 MS.gene64152:intron 30.0%
!! TTCAAAAGATTGGTGATGAT+GGG - chr7.4:10782348-10782367 MS.gene64152:CDS 30.0%
!! TTTCAAAAGATTGGTGATGA+TGG - chr7.4:10782347-10782366 MS.gene64152:CDS 30.0%
!!! CCAATCTTTTGAAATGAACA+TGG + chr7.4:10782341-10782360 None:intergenic 30.0%
AACAAAGAGGCTATGTGTAA+TGG + chr7.4:10782074-10782093 None:intergenic 35.0%
AACACAAAGTGAAGCAAAGA+AGG + chr7.4:10785181-10785200 None:intergenic 35.0%
AACTATTGCAATGACCATTG+CGG - chr7.4:10785257-10785276 MS.gene64152:CDS 35.0%
ACCGTATCATCCTCAAAATT+TGG + chr7.4:10781948-10781967 None:intergenic 35.0%
ACTTATGGTATTTGCAAAGC+TGG - chr7.4:10785090-10785109 MS.gene64152:CDS 35.0%
AGGAAGTTTGTCATCATTGT+CGG + chr7.4:10782258-10782277 None:intergenic 35.0%
AGGTTAGGGTTTCTATTAAG+TGG - chr7.4:10785354-10785373 MS.gene64152:CDS 35.0%
AGTTAACCTCAAGCAAATTC+AGG - chr7.4:10782499-10782518 MS.gene64152:CDS 35.0%
CAACATAAAAGTAACCGCAA+TGG + chr7.4:10785274-10785293 None:intergenic 35.0%
CGGTTGTTCAATATATCCAA+AGG + chr7.4:10784769-10784788 None:intergenic 35.0%
GTGACAATTAAAAAGGAACG+GGG - chr7.4:10784485-10784504 MS.gene64152:intron 35.0%
TGCACCTCTCTATAAATCTT+TGG + chr7.4:10783304-10783323 None:intergenic 35.0%
TGGCAAGAAAATACACATAG+TGG - chr7.4:10785051-10785070 MS.gene64152:CDS 35.0%
TGGCTTTCCACTTAAGAATA+AGG - chr7.4:10785218-10785237 MS.gene64152:CDS 35.0%
TGTAATGGTGTTTCACCAAA+TGG + chr7.4:10782059-10782078 None:intergenic 35.0%
TTACACATAGCCTCTTTGTT+TGG - chr7.4:10782074-10782093 MS.gene64152:CDS 35.0%
! GAAAGTTTGCTTAAGGTAAG+AGG + chr7.4:10782029-10782048 None:intergenic 35.0%
! GAGGGTTGACATTAATTTGA+GGG + chr7.4:10783691-10783710 None:intergenic 35.0%
! TGAATACCTGAATTTGCTTG+AGG + chr7.4:10782508-10782527 None:intergenic 35.0%
! TGAGGGTTGACATTAATTTG+AGG + chr7.4:10783692-10783711 None:intergenic 35.0%
! TTAATGTGGATTATTGCCAG+CGG + chr7.4:10783120-10783139 None:intergenic 35.0%
!! ATCCTGAATTGATTTGTTGG+GGG - chr7.4:10782835-10782854 MS.gene64152:intron 35.0%
!! CTGATCCTGAATTGATTTGT+TGG - chr7.4:10782832-10782851 MS.gene64152:intron 35.0%
!! GATCCTGAATTGATTTGTTG+GGG - chr7.4:10782834-10782853 MS.gene64152:intron 35.0%
!! GTTGTGTTGATTCTTGTTTG+TGG - chr7.4:10785198-10785217 MS.gene64152:CDS 35.0%
!! TTTTAAGGAAGCAATAACCG+TGG - chr7.4:10782809-10782828 MS.gene64152:intron 35.0%
!!! GTAACATGACGACTCTTTTT+TGG - chr7.4:10783394-10783413 MS.gene64152:intron 35.0%
!!! GTGCATTTGTACGAGTTTTT+TGG + chr7.4:10784849-10784868 None:intergenic 35.0%
AATCAATTCAGGATCAGCCA+CGG + chr7.4:10782829-10782848 None:intergenic 40.0%
AATTGGATAGAAGAGACACG+TGG - chr7.4:10784955-10784974 MS.gene64152:CDS 40.0%
AGGGTAACACGATTCTTCAT+TGG - chr7.4:10782474-10782493 MS.gene64152:CDS 40.0%
CTATGAAATCTGCTTGAGAG+CGG + chr7.4:10784789-10784808 None:intergenic 40.0%
CTGCAGTTGTTGGATATGAT+TGG - chr7.4:10785115-10785134 MS.gene64152:CDS 40.0%
CTTACTTATATGTGGGCCAT+TGG - chr7.4:10785294-10785313 MS.gene64152:CDS 40.0%
GACACTTATAAAGGAACGGA+GGG + chr7.4:10784243-10784262 None:intergenic 40.0%
GCATACACTTGCACTACTTA+TGG - chr7.4:10785075-10785094 MS.gene64152:CDS 40.0%
GCTGGCAATAATCCACATTA+AGG - chr7.4:10783119-10783138 MS.gene64152:intron 40.0%
GGAAGTTTGTCATCATTGTC+GGG + chr7.4:10782257-10782276 None:intergenic 40.0%
GGATTGCACTATGCATTTCA+AGG + chr7.4:10782414-10782433 None:intergenic 40.0%
GGGTAACACGATTCTTCATT+GGG - chr7.4:10782475-10782494 MS.gene64152:CDS 40.0%
GTTTCTATTAAGTGGTGCGT+GGG - chr7.4:10785362-10785381 MS.gene64152:CDS 40.0%
TACCCCCAACAAATCAATTC+AGG + chr7.4:10782840-10782859 None:intergenic 40.0%
TCCAAGTTTAGCTAGTGAAG+TGG - chr7.4:10782133-10782152 MS.gene64152:CDS 40.0%
TCCACTTCACTAGCTAAACT+TGG + chr7.4:10782137-10782156 None:intergenic 40.0%
TGACACTTATAAAGGAACGG+AGG + chr7.4:10784244-10784263 None:intergenic 40.0%
TGCGGTTCTTAAATTCCACT+AGG - chr7.4:10782956-10782975 MS.gene64152:intron 40.0%
TTATATGTGGGCCATTGGAT+TGG - chr7.4:10785299-10785318 MS.gene64152:CDS 40.0%
TTGCATGTTCAAGACAAGGA+GGG - chr7.4:10782455-10782474 MS.gene64152:CDS 40.0%
TTTCTATTAAGTGGTGCGTG+GGG - chr7.4:10785363-10785382 MS.gene64152:CDS 40.0%
TTTGCTGCTGTTCTCATTTG+GGG + chr7.4:10784721-10784740 None:intergenic 40.0%
! CGGGGTAGTATTCTCTAAAA+TGG - chr7.4:10784503-10784522 MS.gene64152:intron 40.0%
! GACAAGTATCGTGAAACAGA+GGG + chr7.4:10784014-10784033 None:intergenic 40.0%
! GTTTGCTGCTGTTCTCATTT+GGG + chr7.4:10784722-10784741 None:intergenic 40.0%
! TGTTTGCTGCTGTTCTCATT+TGG + chr7.4:10784723-10784742 None:intergenic 40.0%
!! TTGGGGGTACCAAATATTTG+TGG - chr7.4:10782851-10782870 MS.gene64152:intron 40.0%
AAAGCTGGAACTGCAGTTGT+TGG - chr7.4:10785105-10785124 MS.gene64152:CDS 45.0%
ACCAGGTGTAACCAATCCAA+TGG + chr7.4:10785313-10785332 None:intergenic 45.0%
AGGTCGTTACCCTCTTCATT+TGG - chr7.4:10782163-10782182 MS.gene64152:CDS 45.0%
CAATCAGCATTAAACCCACC+AGG - chr7.4:10785021-10785040 MS.gene64152:CDS 45.0%
CAGCTGAAGCCAAATGAAGA+GGG + chr7.4:10782175-10782194 None:intergenic 45.0%
GCTGTTGCATGTTCAAGACA+AGG - chr7.4:10782451-10782470 MS.gene64152:CDS 45.0%
GGTTTCTATTAAGTGGTGCG+TGG - chr7.4:10785361-10785380 MS.gene64152:CDS 45.0%
GTTGCATGTTCAAGACAAGG+AGG - chr7.4:10782454-10782473 MS.gene64152:CDS 45.0%
TAACAAGGGTCTCACACCTT+TGG - chr7.4:10784750-10784769 MS.gene64152:intron 45.0%
TCAGCTGAAGCCAAATGAAG+AGG + chr7.4:10782176-10782195 None:intergenic 45.0%
TGCATTTCAAGGCCTCAAGA+TGG + chr7.4:10782403-10782422 None:intergenic 45.0%
! CTTCATTTGGCTTCAGCTGA+AGG - chr7.4:10782176-10782195 MS.gene64152:CDS 45.0%
! GCTAGTGAAGTGGACTCAAA+AGG - chr7.4:10782143-10782162 MS.gene64152:CDS 45.0%
! GGACAAGTATCGTGAAACAG+AGG + chr7.4:10784015-10784034 None:intergenic 45.0%
! TTTTCTTGCCAAACTCCACC+TGG + chr7.4:10785042-10785061 None:intergenic 45.0%
!! AAAAAATAAAATAAAATGAA+AGG + chr7.4:10783733-10783752 None:intergenic 5.0%
!! ATAATATATTATATTATTCA+TGG + chr7.4:10783037-10783056 None:intergenic 5.0%
!!! ATTTTATTTTATTTTTTTGA+AGG - chr7.4:10783736-10783755 MS.gene64152:intron 5.0%
!!! CTTAAATTAATTATTTTTTT+AGG - chr7.4:10783658-10783677 MS.gene64152:intron 5.0%
!!! TAAATTAATTATTTTTTTAG+GGG - chr7.4:10783660-10783679 MS.gene64152:intron 5.0%
ATACATTTGGCCGTGTCAGG+AGG - chr7.4:10782278-10782297 MS.gene64152:CDS 50.0%
CCTATACATTTGGCCGTGTC+AGG - chr7.4:10782275-10782294 MS.gene64152:CDS 50.0%
CCTGACACGGCCAAATGTAT+AGG + chr7.4:10782278-10782297 None:intergenic 50.0%
TAAACCCACCAGGTGGAGTT+TGG - chr7.4:10785031-10785050 MS.gene64152:CDS 50.0%
TCAACTCCTCAACAACCTCC+AGG + chr7.4:10782307-10782326 None:intergenic 50.0%
TCAGCATTAAACCCACCAGG+TGG - chr7.4:10785024-10785043 MS.gene64152:CDS 50.0%
TGCATAGTGCAATCCGTGAG+TGG - chr7.4:10782419-10782438 MS.gene64152:CDS 50.0%
! ATGTGGATTATTGCCAGCGG+CGG + chr7.4:10783117-10783136 None:intergenic 50.0%
! GGTCTGTGCACAGAGTGTTA+AGG + chr7.4:10784677-10784696 None:intergenic 50.0%
! TAGAAAAGTTGGGGGTGCAG+TGG - chr7.4:10783074-10783093 MS.gene64152:intron 50.0%
!! GCCATTGGATTGGTTACACC+TGG - chr7.4:10785309-10785328 MS.gene64152:CDS 50.0%
!! TTGGGGGTGCAGTGGTTTTA+TGG - chr7.4:10783082-10783101 MS.gene64152:intron 50.0%
AGGACACCTGGAGGTTGTTG+AGG - chr7.4:10782298-10782317 MS.gene64152:CDS 55.0%
CAGCTCTTGTGCTCCACTCA+CGG + chr7.4:10782435-10782454 None:intergenic 55.0%
CTTGCCAAACTCCACCTGGT+GGG + chr7.4:10785038-10785057 None:intergenic 55.0%
TCTTGCCAAACTCCACCTGG+TGG + chr7.4:10785039-10785058 None:intergenic 55.0%
ATGGATCTCAGATCCGCCGC+TGG - chr7.4:10783101-10783120 MS.gene64152:intron 60.0%
CTCCAGGTGTCCTCCTGACA+CGG + chr7.4:10782291-10782310 None:intergenic 60.0%
CGTGTCAGGAGGACACCTGG+AGG - chr7.4:10782289-10782308 MS.gene64152:CDS 65.0%
GGCCGTGTCAGGAGGACACC+TGG - chr7.4:10782286-10782305 MS.gene64152:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 10781930 10785470 10781930 ID=MS.gene64152
chr7.4 mRNA 10781930 10785470 10781930 ID=MS.gene64152.t1;Parent=MS.gene64152
chr7.4 exon 10784880 10785470 10784880 ID=MS.gene64152.t1.exon1;Parent=MS.gene64152.t1
chr7.4 CDS 10784880 10785470 10784880 ID=cds.MS.gene64152.t1;Parent=MS.gene64152.t1
chr7.4 exon 10781930 10782706 10781930 ID=MS.gene64152.t1.exon2;Parent=MS.gene64152.t1
chr7.4 CDS 10781930 10782706 10781930 ID=cds.MS.gene64152.t1;Parent=MS.gene64152.t1
Gene Sequence

>MS.gene64152

ATGGAAGAGTTATCTCCAAATTTTGAGGATGATACGGTAAGAGCACTCTATGAAGCAATAATAAATGGTAACATAAGTGCCTTACAAAAACTAAATCCTCTTACCTTAAGCAAACTTTCATTCTCTCCATTTGGTGAAACACCATTACACATAGCCTCTTTGTTTGGATATTTAGAGTTGTGTGTGATTTTTCTTGAAGTGAATCCAAGTTTAGCTAGTGAAGTGGACTCAAAAGGTCGTTACCCTCTTCATTTGGCTTCAGCTGAAGGACACATTCAAATAGTGAAAGCTTTATTGATGACAAATCCAAATATTTGTTTGATTCCCGACAATGATGACAAACTTCCTATACATTTGGCCGTGTCAGGAGGACACCTGGAGGTTGTTGAGGAGTTGAAAAATGCTAAGCCATGTTCATTTCAAAAGATTGGTGATGATGGGTCAATATTGCATTTGTGTGTTAGATATAACCATCTTGAGGCCTTGAAATGCATAGTGCAATCCGTGAGTGGAGCACAAGAGCTGTTGCATGTTCAAGACAAGGAGGGTAACACGATTCTTCATTGGGCAGTTAACCTCAAGCAAATTCAGGTATTCAACCTTACCACATTTTTATTGGTTACTATTCAGTCCTTACATTTTATTATACATTTTTAATTAAAAAAATGTCTTTTAGTAGTTTTAATTGAGCTTATTTAAGCTTTTAAAATCAATTACAATTAAAAAAAAAATGTTTCTCCTTATTAAAATTAGAAGCTGATTGTAGTAGCTTTTGAAAAAAAAATGATTTTGATGAAAGAAGTAAATGAAAGAGAAGATTAATTCAAAAGGTGATTGTGTCTAGACAAACACAAATTTATAAGTAATAACCCACATATTTTTTAAGGAAGCAATAACCGTGGCTGATCCTGAATTGATTTGTTGGGGGTACCAAATATTTGTGGAATAGATATTAAACAGTTTCAAAAAGGATCAAAATTATGATTTGTTGTGGTGGTTCATTTGCTTAATTGTAACATAGAGGATTGCGGTTCTTAAATTCCACTAGGTACGTCTTTTTTAATAAAATATTAAAAGTACAAAAGAAATATTAAAAGTAGGGAGCCATGAATAATATAATATATTATGTCTAATATAGAATTTATAGAAAAGTTGGGGGTGCAGTGGTTTTATGGATCTCAGATCCGCCGCTGGCAATAATCCACATTAAGGTCACTACAAATAATTTTATGATTATGTTATCTAATAATCATTGTTATTTTAATCTTAAACAAGCAGACTTAGGGAAGAGCTTGACTTTTCAATAACAAGTTTTTTCATTTACATTAATTGAAACTTTACTTATAAAATTTGAGTCCAATTCTACCTAAACCAAAGATTTATAGAGAGGTGCAACATGACGACTCTTTTTTGCTTATAAAATTTGAGTCCAATTCTACCTAAACCAAAAATTTATAGGGAGGTGTAACATGACGACTCTTTTTTGGAAGAGTAACATGAAGACTTTTGAGTTGTTCTTTATTTATTTATTTTGGTCAAGTGTGTAGTTCTATTCTTACCTACCATATTTTTTTTTTCTTTCTATTTTTACTCAACAACTTTTCTATTAAATAGGATGAATTTCCAAATGATGTATAACTCAGTATAAGTGATACTTATTGATAGTTCTATCTATTAGTTTGAAAATCAATAAAAAAAAAAATACGTAACCACATATAATTAACTTCTCTTAAATTAATTATTTTTTTAGGGGAACTTCCCTCAAATTAATGTCAACCCTCAACATTCTAAACTTATACTCCTTTCATTTTATTTTATTTTTTTGAAGGAACTCCTTTCATTTTATTGAGTGTCACATTTAATTATTTTACATAAATTAGAAAGAACTTACAAATAAAAGAAAGAGATTAATAATTTTATCATAATAATATTTTTAAGTATTTATGTATTAATCATTATTATAAACACAAAGTGAAATATATTGACTTTATTTTTTTTATGGATAGTGAAATATATTGATTTAAAAGTGATACACGTAATATAAACTAAAGGGCAGCTAAAAAAGCAAATAATGTTATACTCCCTCTGTTTCACGATACTTGTCCATTTTGAAGAAATTACACATACCAAGAAATCAAATAAATGTTTTATGAAATTCTTTGTGTTTTTCTATAATACTCTTATTCATTTATTATTTCATTCTATTATTTCTCTATCTACAATAAATAGATAGAGGTATTATTGATAAACCAATAATTAATGTTGCATTAAAACTTGGAATTGACAAGTAAAGTGAAAAAAAAAATTACTCCCTCCGTTCCTTTATAAGTGTCACTTTTAGAGAAAAATTTTATTTCAATTTAATTGTCACTTTCAAAGTTCAATGCAACATTAAATGTTGTTTTACCATTATTACCCTTAGTTATTTATTGTGGAGAGAGAAGTATATGAAAGAAGATATTAAATGAATAAGGTCATTATGGTAAAAGTATACATTATTGTATCAAAAGTAGTAACATTTATTTATTGTTTTGGTATGTGTAAAATATCAAAATGTGACAATTAAAAAGGAACGGGGTAGTATTCTCTAAAATGGATAAGTATTGTGATGGAGTATTGAAAATTGAAATTCATAACAATTTCTTTTTGTCAACGTGACATTCATAATGAGATTCAGGTATTACATTGTTTTCGTTTTTAAACTCTCAGTTTTCATTATTGAGTTTCTAAAAGTGATTGATTTTCCTTAACACTCTGTGCACAGACCATAAAATTCTTGCTTTCGCTTCCCCAAATGAGAACAGCAGCAAACACTTTGAATAACAAGGGTCTCACACCTTTGGATATATTGAACAACCGCTCTCAAGCAGATTTCATAGACATTGCAATCCAATACATTTTAATTGAAGCAGGGGTCCAAAAAACTCGTACAAATGCACATGCTAGTAGTACTAATGAAGCACATCAATCCAATACATTGAAAAATTGGGAGAATTTTTTGTCAAAATACATACAACATCAAGGTAATTGGATAGAAGAGACACGTGGCACATTAATGATTGTAGCAACCGTAATTGCAACCATGACATTTCAATCAGCATTAAACCCACCAGGTGGAGTTTGGCAAGAAAATACACATAGTGGTGCATACACTTGCACTACTTATGGTATTTGCAAAGCTGGAACTGCAGTTGTTGGATATGATTGGTCAGAAGATTATGTTAAATTCATGTCATTTAACACTGTCTCCTTCTTTGCTTCACTTTGTGTTGTGTTGATTCTTGTTTGTGGCTTTCCACTTAAGAATAAGGTTATAATGTGGATATTAACTATTGCAATGACCATTGCGGTTACTTTTATGTTGCTTACTTATATGTGGGCCATTGGATTGGTTACACCTGGTCATATTTATTATGATGCTTATAGGTTAGGGTTTCTATTAAGTGGTGCGTGGGGTGTTATACTTCTTGTTCTTGCTTTGATTCAAATTGTAAGGTTTGTTTTTTGGATAAGGAAGAAGAAGAAGCAGCTCCAAACATAA
Protein sequence

>MS.gene64152.t1

MEELSPNFEDDTVRALYEAIINGNISALQKLNPLTLSKLSFSPFGETPLHIASLFGYLELCVIFLEVNPSLASEVDSKGRYPLHLASAEGHIQIVKALLMTNPNICLIPDNDDKLPIHLAVSGGHLEVVEELKNAKPCSFQKIGDDGSILHLCVRYNHLEALKCIVQSVSGAQELLHVQDKEGNTILHWAVNLKQIQTIKFLLSLPQMRTAANTLNNKGLTPLDILNNRSQADFIDIAIQYILIEAGVQKTRTNAHASSTNEAHQSNTLKNWENFLSKYIQHQGNWIEETRGTLMIVATVIATMTFQSALNPPGGVWQENTHSGAYTCTTYGICKAGTAVVGYDWSEDYVKFMSFNTVSFFASLCVVLILVCGFPLKNKVIMWILTIAMTIAVTFMLLTYMWAIGLVTPGHIYYDAYRLGFLLSGAWGVILLVLALIQIVRFVFWIRKKKKQLQT