Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64556.t1 | RHN46077.1 | 93.6 | 950 | 49 | 4 | 1 | 938 | 1 | 950 | 0.00E+00 | 1502.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64556.t1 | Q9XSC3 | 28.2 | 504 | 306 | 17 | 258 | 734 | 354 | 828 | 3.9e-35 | 151.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64556.t1 | A0A396H573 | 93.6 | 950 | 49 | 4 | 1 | 938 | 1 | 950 | 0.0e+00 | 1502.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene64556 | MS.gene052582 | PPI |
MS.gene64556 | MS.gene32229 | PPI |
MS.gene64556 | MS.gene052584 | PPI |
MS.gene64556 | MS.gene28682 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64556.t1 | MTR_7g060420 | 96.296 | 945 | 22 | 4 | 4 | 935 | 1 | 945 | 0.0 | 1885 |
MS.gene64556.t1 | MTR_2g079740 | 40.000 | 885 | 386 | 20 | 85 | 927 | 77 | 858 | 2.34e-175 | 531 |
MS.gene64556.t1 | MTR_8g100005 | 34.564 | 677 | 334 | 15 | 261 | 927 | 137 | 714 | 3.16e-109 | 353 |
MS.gene64556.t1 | MTR_3g491920 | 40.036 | 562 | 263 | 16 | 372 | 924 | 203 | 699 | 2.82e-105 | 343 |
MS.gene64556.t1 | MTR_1g007740 | 47.043 | 372 | 187 | 5 | 385 | 756 | 234 | 595 | 1.47e-99 | 330 |
MS.gene64556.t1 | MTR_8g092890 | 39.323 | 384 | 183 | 4 | 376 | 759 | 196 | 529 | 7.84e-84 | 283 |
MS.gene64556.t1 | MTR_3g095780 | 41.489 | 376 | 194 | 6 | 385 | 759 | 169 | 519 | 1.79e-78 | 268 |
MS.gene64556.t1 | MTR_8g100005 | 37.666 | 377 | 197 | 7 | 261 | 629 | 137 | 483 | 5.46e-70 | 241 |
MS.gene64556.t1 | MTR_4g119620 | 31.556 | 225 | 137 | 10 | 502 | 720 | 64 | 277 | 1.42e-22 | 100 |
MS.gene64556.t1 | MTR_1g072140 | 28.936 | 235 | 150 | 9 | 516 | 742 | 67 | 292 | 2.31e-22 | 99.4 |
MS.gene64556.t1 | MTR_7g086360 | 24.561 | 228 | 153 | 6 | 509 | 726 | 89 | 307 | 9.41e-12 | 68.2 |
MS.gene64556.t1 | MTR_6g004040 | 26.027 | 219 | 136 | 10 | 513 | 721 | 54 | 256 | 2.24e-11 | 68.2 |
MS.gene64556.t1 | MTR_8g037340 | 22.400 | 250 | 171 | 7 | 503 | 732 | 208 | 454 | 4.57e-11 | 67.0 |
MS.gene64556.t1 | MTR_2g012630 | 25.581 | 215 | 142 | 8 | 513 | 721 | 53 | 255 | 6.14e-11 | 67.0 |
MS.gene64556.t1 | MTR_2g012630 | 25.581 | 215 | 142 | 8 | 513 | 721 | 53 | 255 | 8.49e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64556.t1 | AT5G02430 | 52.096 | 954 | 375 | 22 | 4 | 934 | 11 | 905 | 0.0 | 836 |
MS.gene64556.t1 | AT2G37670 | 51.314 | 951 | 389 | 24 | 4 | 934 | 7 | 903 | 0.0 | 827 |
MS.gene64556.t1 | AT2G37670 | 51.314 | 951 | 389 | 24 | 4 | 934 | 8 | 904 | 0.0 | 827 |
MS.gene64556.t1 | AT5G54200 | 45.283 | 689 | 289 | 15 | 262 | 927 | 202 | 825 | 2.31e-166 | 507 |
MS.gene64556.t1 | AT3G15470 | 39.874 | 795 | 377 | 18 | 18 | 759 | 11 | 757 | 2.50e-161 | 496 |
MS.gene64556.t1 | AT5G24320 | 46.982 | 381 | 184 | 8 | 385 | 756 | 226 | 597 | 1.26e-97 | 322 |
MS.gene64556.t1 | AT5G24320 | 46.094 | 384 | 187 | 7 | 385 | 756 | 226 | 601 | 1.62e-95 | 317 |
MS.gene64556.t1 | AT5G53500 | 44.947 | 376 | 189 | 6 | 385 | 756 | 196 | 557 | 2.45e-94 | 312 |
MS.gene64556.t1 | AT5G53500 | 44.947 | 376 | 189 | 6 | 385 | 756 | 196 | 557 | 2.45e-94 | 312 |
MS.gene64556.t1 | AT1G64610 | 38.534 | 423 | 233 | 8 | 340 | 756 | 158 | 559 | 1.05e-84 | 286 |
MS.gene64556.t1 | AT1G64610 | 38.534 | 423 | 233 | 8 | 340 | 756 | 158 | 559 | 1.05e-84 | 286 |
MS.gene64556.t1 | AT5G42010 | 39.796 | 392 | 219 | 7 | 374 | 756 | 221 | 604 | 8.01e-84 | 285 |
MS.gene64556.t1 | AT1G48870 | 37.534 | 373 | 188 | 6 | 385 | 756 | 173 | 501 | 5.00e-74 | 255 |
MS.gene64556.t1 | AT1G48870 | 37.534 | 373 | 188 | 6 | 385 | 756 | 173 | 501 | 5.00e-74 | 255 |
MS.gene64556.t1 | AT1G48870 | 37.534 | 373 | 188 | 6 | 385 | 756 | 173 | 501 | 5.00e-74 | 255 |
MS.gene64556.t1 | AT5G42010 | 39.106 | 358 | 205 | 6 | 374 | 725 | 221 | 571 | 1.59e-73 | 253 |
MS.gene64556.t1 | AT3G49660 | 28.512 | 242 | 156 | 10 | 509 | 742 | 62 | 294 | 1.62e-21 | 97.1 |
MS.gene64556.t1 | AT3G49660 | 23.837 | 344 | 194 | 12 | 404 | 724 | 18 | 316 | 4.84e-17 | 83.6 |
MS.gene64556.t1 | AT4G02730 | 28.972 | 214 | 136 | 10 | 514 | 720 | 81 | 285 | 1.12e-19 | 92.0 |
MS.gene64556.t1 | AT2G16405 | 22.747 | 233 | 161 | 5 | 516 | 732 | 214 | 443 | 9.06e-14 | 75.5 |
MS.gene64556.t1 | AT2G43770 | 24.123 | 228 | 154 | 6 | 509 | 726 | 87 | 305 | 1.33e-12 | 70.9 |
Find 211 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTATATATCAAGAAGTTTA+AGG | 0.136542 | 7.3:+44556105 | MS.gene64556:CDS |
ATAAGATGTTATCAGAATTT+TGG | 0.139915 | 7.3:+44559352 | MS.gene64556:CDS |
TCCTTCTTTGATTTCTTCTA+TGG | 0.164192 | 7.3:+44556484 | MS.gene64556:CDS |
AGAATTATTGTGAGGGATTC+TGG | 0.170072 | 7.3:+44555795 | MS.gene64556:CDS |
AATCTCAAGGGAAGAATAAA+TGG | 0.177473 | 7.3:+44556240 | MS.gene64556:CDS |
AGGATAAAGTGATACATATT+TGG | 0.205472 | 7.3:+44556399 | MS.gene64556:CDS |
GAAGTTGTTCATAAATTTAA+AGG | 0.205982 | 7.3:+44558379 | MS.gene64556:CDS |
AAGCACATGAAGGGTGTATT+TGG | 0.224621 | 7.3:+44556330 | MS.gene64556:CDS |
CTACTTCACTTTCTGTTACT+TGG | 0.234994 | 7.3:-44559108 | None:intergenic |
GTTAAGAAGAAAGGGAAATT+TGG | 0.245352 | 7.3:+44556539 | MS.gene64556:CDS |
TCAGGCACATGAACATATTC+AGG | 0.255447 | 7.3:-44556590 | None:intergenic |
TGGACAAGACAGTGAGATTA+TGG | 0.256008 | 7.3:+44557149 | MS.gene64556:CDS |
ACGAAGATTGCTTGGAAGTA+TGG | 0.263016 | 7.3:+44555407 | MS.gene64556:CDS |
TCATTATTGAAGAATATTAA+AGG | 0.267607 | 7.3:+44556149 | MS.gene64556:CDS |
GCTATTTCTAGGACGAATTC+AGG | 0.278348 | 7.3:+44559145 | MS.gene64556:CDS |
TTGGACTATTAAGTTTAGTT+TGG | 0.289235 | 7.3:+44556349 | MS.gene64556:CDS |
TTGCTCCAAACTATGATATA+TGG | 0.301140 | 7.3:+44555352 | MS.gene64556:CDS |
TGGTCATTTGGATGAAGTTT+TGG | 0.306311 | 7.3:+44556655 | MS.gene64556:CDS |
GCTTGCCTACCCATCCTTCT+TGG | 0.306322 | 7.3:-44559379 | None:intergenic |
GAAATCAAAGAAGGATGAAT+AGG | 0.308858 | 7.3:-44556476 | None:intergenic |
GTAATAGTAACAGCTGGATT+TGG | 0.314205 | 7.3:+44559322 | MS.gene64556:CDS |
ACATGATTATTGCCTTTCTT+TGG | 0.315544 | 7.3:-44558959 | None:intergenic |
GGAAAACGCTGACCATGAAT+TGG | 0.321027 | 7.3:+44555130 | MS.gene64556:CDS |
GGATCGCCTTTGATCATAAA+TGG | 0.322775 | 7.3:-44558878 | None:intergenic |
TGATATATGGATGGCTGCTC+CGG | 0.333028 | 7.3:+44555365 | MS.gene64556:CDS |
AAAATGCATACTTGACCATC+TGG | 0.339697 | 7.3:-44557477 | None:intergenic |
CCCGTAGCCGGTGGAAGTTC+CGG | 0.341751 | 7.3:-44555327 | None:intergenic |
ACTTTCTGTTACTTGGTTGT+TGG | 0.347430 | 7.3:-44559101 | None:intergenic |
TCCGGCTTCCGGTGTTTGGC+GGG | 0.352073 | 7.3:-44555309 | None:intergenic |
TTCTTTGCACATAATGATTA+CGG | 0.353829 | 7.3:+44557199 | MS.gene64556:CDS |
GATTGATGAACCGGAACTTC+TGG | 0.357383 | 7.3:-44558902 | None:intergenic |
GATGAAGATTATTTCATTAG+TGG | 0.357624 | 7.3:+44557357 | MS.gene64556:CDS |
AAATGTTGATACTCATAGTA+TGG | 0.357670 | 7.3:+44556517 | MS.gene64556:CDS |
GCCATCCATATATCATAGTT+TGG | 0.364849 | 7.3:-44555357 | None:intergenic |
CGGTTAAGCGATTTAGAAAC+AGG | 0.364889 | 7.3:+44555960 | MS.gene64556:CDS |
TTATTACTTCAGCTGATTCC+AGG | 0.368472 | 7.3:+44558335 | MS.gene64556:CDS |
AGCGATGCAGGGTCATGTTC+TGG | 0.369629 | 7.3:-44559004 | None:intergenic |
GGCGGTGGAGAGACGGTTAT+AGG | 0.376991 | 7.3:-44555196 | None:intergenic |
TAATTCATCTTCATCTTCTT+CGG | 0.378666 | 7.3:+44555548 | MS.gene64556:CDS |
GCTACTACTTTCATCTTCAA+TGG | 0.379972 | 7.3:+44557129 | MS.gene64556:intron |
AAGATCATGGAGCTATTTCT+AGG | 0.384789 | 7.3:+44559134 | MS.gene64556:CDS |
CCGGTGTTTGGCGGGGTGAA+AGG | 0.384810 | 7.3:-44555301 | None:intergenic |
AAGTTCCGGCTTCCGGTGTT+TGG | 0.387583 | 7.3:-44555313 | None:intergenic |
AAGGGGAATTGTCGTACTTA+TGG | 0.388748 | 7.3:+44557970 | MS.gene64556:CDS |
CTTATTATAAATCTTCCATT+TGG | 0.389080 | 7.3:-44558716 | None:intergenic |
TTTGTCTTGGTCTAGATCTC+AGG | 0.394252 | 7.3:+44556679 | MS.gene64556:CDS |
CCGGTGGAAGTTCCGGCTTC+CGG | 0.396460 | 7.3:-44555320 | None:intergenic |
TCGCTTTCGCAAAGTGAATC+AGG | 0.397834 | 7.3:+44559022 | MS.gene64556:CDS |
TCTAGGACGAATTCAGGGTT+TGG | 0.399571 | 7.3:+44559151 | MS.gene64556:CDS |
AGGCGATCCACCAGAAGTTC+CGG | 0.401661 | 7.3:+44558892 | MS.gene64556:CDS |
CTTCAGATCGCGATCGAACT+AGG | 0.402925 | 7.3:-44555641 | None:intergenic |
GATTCTGCATCGATTAGATA+TGG | 0.404406 | 7.3:+44559190 | MS.gene64556:CDS |
GGATAAAGTGATACATATTT+GGG | 0.410711 | 7.3:+44556400 | MS.gene64556:CDS |
CCGCAGAGGCGAAGGATAAC+CGG | 0.411170 | 7.3:-44555272 | None:intergenic |
TGACCATGAAAAGAACAATA+AGG | 0.413335 | 7.3:-44556638 | None:intergenic |
TCACTTTGCGAAAGCGATGC+AGG | 0.415404 | 7.3:-44559016 | None:intergenic |
ACAAGAACTAATACTGATAT+AGG | 0.416494 | 7.3:+44555735 | MS.gene64556:CDS |
GAAGAAGAAGCTAAGTCATC+GGG | 0.418398 | 7.3:-44555222 | None:intergenic |
GACTAAATGATGCTGCCATT+TGG | 0.421252 | 7.3:-44558694 | None:intergenic |
ATAATGAGACGACGTAATTA+CGG | 0.425551 | 7.3:+44556044 | MS.gene64556:CDS |
CATAGTATGGTTAAGAAGAA+AGG | 0.428148 | 7.3:+44556530 | MS.gene64556:CDS |
TCATCCTTCAGCATGGGGTT+TGG | 0.428920 | 7.3:+44559300 | MS.gene64556:CDS |
GCAAATACTACAACTTCATC+TGG | 0.431620 | 7.3:+44555576 | MS.gene64556:CDS |
GCCGAGGCCGTCCCAATTCA+TGG | 0.432530 | 7.3:-44555142 | None:intergenic |
ATGAAATAATCTTCATCCAT+AGG | 0.432667 | 7.3:-44557351 | None:intergenic |
TGTCGTACTTATGGCATAGA+AGG | 0.435214 | 7.3:+44557979 | MS.gene64556:CDS |
GCCGGAACTTCCACCGGCTA+CGG | 0.436999 | 7.3:+44555326 | MS.gene64556:CDS |
AAGATTCACAAGTATATGTA+TGG | 0.437698 | 7.3:+44558747 | MS.gene64556:CDS |
TTCCGGCTTCCGGTGTTTGG+CGG | 0.441501 | 7.3:-44555310 | None:intergenic |
AGCACTTCTGCTGGATTACA+TGG | 0.443198 | 7.3:-44558313 | None:intergenic |
GCAGCATCATTTAGTCCAAA+TGG | 0.443239 | 7.3:+44558701 | MS.gene64556:CDS |
CTGCTCGTCTTGTTGTGGAT+TGG | 0.443534 | 7.3:+44557415 | MS.gene64556:CDS |
TCTAATTATTCAGCATATGA+TGG | 0.444158 | 7.3:+44559265 | MS.gene64556:CDS |
GAGTTTATTGTAAAGGAATA+CGG | 0.444924 | 7.3:+44555918 | MS.gene64556:CDS |
TTAAGAAAGGAGGAAATCAT+AGG | 0.446013 | 7.3:+44555690 | MS.gene64556:CDS |
AGCAGTTCATCCTTCAGCAT+GGG | 0.447077 | 7.3:+44559294 | MS.gene64556:CDS |
GTAACATCCAGCTCAGGGCT+TGG | 0.447452 | 7.3:+44555858 | MS.gene64556:CDS |
GAAAACGCTGACCATGAATT+GGG | 0.451517 | 7.3:+44555131 | MS.gene64556:CDS |
TGGAAAAGAGTTTATTGTAA+AGG | 0.452135 | 7.3:+44555911 | MS.gene64556:CDS |
AGGGAAGAATAAATGGGTTA+AGG | 0.452354 | 7.3:+44556247 | MS.gene64556:CDS |
CTAACAGAATTTGACCAAAC+AGG | 0.452778 | 7.3:-44555522 | None:intergenic |
TACGGAAGAAATGATGGTTA+TGG | 0.455454 | 7.3:+44556062 | MS.gene64556:CDS |
CTTCTTTCCGTGATGGATCC+CGG | 0.457488 | 7.3:-44555384 | None:intergenic |
GAACGCTCCAAGCCCTGAGC+TGG | 0.458374 | 7.3:-44555865 | None:intergenic |
TCGCAAAGTGAATCAGGAAT+AGG | 0.459454 | 7.3:+44559028 | MS.gene64556:CDS |
GGGAAATTTGGAAGTAAAAG+AGG | 0.459753 | 7.3:+44556551 | MS.gene64556:CDS |
TTGGACTGATATTCATGAAA+TGG | 0.463204 | 7.3:+44557434 | MS.gene64556:CDS |
GTGAAAACGGAACGTGGAAT+CGG | 0.468424 | 7.3:+44555940 | MS.gene64556:CDS |
AGAATCAAGAAACTCCTGTT+TGG | 0.469940 | 7.3:+44555508 | MS.gene64556:CDS |
GTTCTCTACAAAATTAAGAA+AGG | 0.469975 | 7.3:+44555677 | MS.gene64556:CDS |
TCTTCGTCTTCTTTCCGTGA+TGG | 0.470299 | 7.3:-44555391 | None:intergenic |
CATCTCTGCTCGTCTTGTTG+TGG | 0.470885 | 7.3:+44557410 | MS.gene64556:CDS |
ACTATTAAGTTTAGTTTGGA+TGG | 0.471136 | 7.3:+44556353 | MS.gene64556:CDS |
ATGAGTATGAGAGCTGAGGA+AGG | 0.472582 | 7.3:+44556443 | MS.gene64556:CDS |
CGAAGATTGCTTGGAAGTAT+GGG | 0.473635 | 7.3:+44555408 | MS.gene64556:CDS |
ATTGCTTGGAAGTATGGGAT+TGG | 0.474366 | 7.3:+44555413 | MS.gene64556:CDS |
TTGTTGTAGGGTGTTCTAGT+TGG | 0.475302 | 7.3:+44557940 | MS.gene64556:intron |
GGAGGAGACCGCAGAGGCGA+AGG | 0.478587 | 7.3:-44555280 | None:intergenic |
TAGTGGTTCCCTTGATGCTA+AGG | 0.479972 | 7.3:+44557374 | MS.gene64556:CDS |
TGTTCTAGTTGGAACACAAA+AGG | 0.483674 | 7.3:+44557951 | MS.gene64556:CDS |
ACCATGAATTGGGACGGCCT+CGG | 0.484435 | 7.3:+44555141 | MS.gene64556:CDS |
CGGCGTTCCATGGTGGCCAT+CGG | 0.484584 | 7.3:-44555108 | None:intergenic |
GTAAAGGAATACGGTGAAAA+CGG | 0.484620 | 7.3:+44555927 | MS.gene64556:CDS |
GAGCATAGAAATTCAAGTAC+AGG | 0.484895 | 7.3:+44558779 | MS.gene64556:CDS |
GGTGTAGCAAGTGGAATTGT+TGG | 0.485256 | 7.3:+44556170 | MS.gene64556:CDS |
TTAAGTTTAGTTTGGATGGA+AGG | 0.487032 | 7.3:+44556357 | MS.gene64556:CDS |
GAAGAATTTGAAAACACCAT+TGG | 0.488960 | 7.3:+44555999 | MS.gene64556:CDS |
CCCCGCCAAACACCGGAAGC+CGG | 0.489179 | 7.3:+44555308 | MS.gene64556:CDS |
ACCATCCACAATTCTTATCC+TGG | 0.489230 | 7.3:-44558353 | None:intergenic |
ATTCTGGAGACTCCTCTGTC+AGG | 0.490042 | 7.3:+44555811 | MS.gene64556:CDS |
TCTAATGCAGCTACTCCATC+AGG | 0.491325 | 7.3:+44559229 | MS.gene64556:CDS |
ATAGTATGGTTAAGAAGAAA+GGG | 0.491779 | 7.3:+44556531 | MS.gene64556:CDS |
CGTAATTACGGAAGAAATGA+TGG | 0.491794 | 7.3:+44556056 | MS.gene64556:CDS |
CTGTGTTCAATTCAACCCTA+TGG | 0.494212 | 7.3:+44557335 | MS.gene64556:CDS |
GAAGTAATAAGCACTTCTGC+TGG | 0.496342 | 7.3:-44558322 | None:intergenic |
GGACAAGACAGTGAGATTAT+GGG | 0.496894 | 7.3:+44557150 | MS.gene64556:CDS |
TGGGTTAAGGTTAGACAAAG+TGG | 0.496957 | 7.3:+44556260 | MS.gene64556:CDS |
CTTCCACCTCTTCCAAAGAA+AGG | 0.498201 | 7.3:+44558947 | MS.gene64556:CDS |
GAAAGAAGACGAAGATTGCT+TGG | 0.499213 | 7.3:+44555399 | MS.gene64556:CDS |
TGAAATAATCTTCATCCATA+GGG | 0.507376 | 7.3:-44557350 | None:intergenic |
CCGATGGTAACATCCAGCTC+AGG | 0.507671 | 7.3:+44555852 | MS.gene64556:CDS |
CTACTCCATCAGGTTCATCT+TGG | 0.509621 | 7.3:+44559239 | MS.gene64556:CDS |
GACAGTGAGATTATGGGACT+TGG | 0.511728 | 7.3:+44557156 | MS.gene64556:CDS |
TAAGTCATCGGGGACGGCGG+TGG | 0.512697 | 7.3:-44555211 | None:intergenic |
GTTCTAGTTGGAACACAAAA+GGG | 0.519746 | 7.3:+44557952 | MS.gene64556:CDS |
GCTACTGAAACATCTTTACA+TGG | 0.520245 | 7.3:-44558845 | None:intergenic |
CAGCAGTTCATCCTTCAGCA+TGG | 0.521390 | 7.3:+44559293 | MS.gene64556:CDS |
ATCTCAAGGGAAGAATAAAT+GGG | 0.522941 | 7.3:+44556241 | MS.gene64556:CDS |
CTAGTTCGATCGCGATCTGA+AGG | 0.524269 | 7.3:+44555642 | MS.gene64556:CDS |
TTTGGAAGTAAAAGAGGAGG+AGG | 0.525531 | 7.3:+44556557 | MS.gene64556:CDS |
CGGGGACGGCGGTGGAGAGA+CGG | 0.525834 | 7.3:-44555203 | None:intergenic |
ACATTCTGACCTTAGCATCA+AGG | 0.526077 | 7.3:-44557383 | None:intergenic |
GCAGTTCATCCTTCAGCATG+GGG | 0.526143 | 7.3:+44559295 | MS.gene64556:CDS |
CCTGCCGCCGATGGCCACCA+TGG | 0.526567 | 7.3:+44555101 | None:intergenic |
CCTTGGCCATTTATGATCAA+AGG | 0.527169 | 7.3:+44558872 | MS.gene64556:CDS |
TTATTGCCTTTCTTTGGAAG+AGG | 0.527300 | 7.3:-44558953 | None:intergenic |
GTTGATCAAAATAAATCTCA+AGG | 0.527745 | 7.3:+44556227 | MS.gene64556:CDS |
TCCATAGAAGAAATCAAAGA+AGG | 0.529619 | 7.3:-44556485 | None:intergenic |
TTTGGAGCAATGCCCGTAGC+CGG | 0.531947 | 7.3:-44555339 | None:intergenic |
CCGGAACTTCCACCGGCTAC+GGG | 0.532886 | 7.3:+44555327 | MS.gene64556:CDS |
TGAGTATGAGAGCTGAGGAA+GGG | 0.533053 | 7.3:+44556444 | MS.gene64556:CDS |
TTGCCTTTCTTTGGAAGAGG+TGG | 0.533308 | 7.3:-44558950 | None:intergenic |
AGTGAAGTAGAAGAAGATCA+TGG | 0.534535 | 7.3:+44559121 | MS.gene64556:CDS |
GGCAATAATCATGTAACAGA+AGG | 0.535145 | 7.3:+44558968 | MS.gene64556:CDS |
TTGGAAGTAAAAGAGGAGGA+GGG | 0.537354 | 7.3:+44556558 | MS.gene64556:CDS |
CTATTTCTAGGACGAATTCA+GGG | 0.539394 | 7.3:+44559146 | MS.gene64556:CDS |
GATATATGGATGGCTGCTCC+GGG | 0.540279 | 7.3:+44555366 | MS.gene64556:CDS |
TCGAAATGCAAACAGCCAAA+TGG | 0.540382 | 7.3:+44558679 | MS.gene64556:CDS |
GGGTTAAGGTTAGACAAAGT+GGG | 0.543193 | 7.3:+44556261 | MS.gene64556:CDS |
CAAGAGTTTCAAGCACATGA+AGG | 0.543726 | 7.3:+44556320 | MS.gene64556:CDS |
GCGTGCCGAGCACATGTGCT+CGG | 0.545392 | 7.3:-44555762 | None:intergenic |
GCATGCCGAGCACATGTGCT+CGG | 0.545437 | 7.3:+44555757 | MS.gene64556:CDS |
ATAGTAACAGCTGGATTTGG+AGG | 0.545632 | 7.3:+44559325 | MS.gene64556:CDS |
CCGGAAGCCGGAACTTCCAC+CGG | 0.549094 | 7.3:+44555320 | MS.gene64556:CDS |
TTAAGGTTAAGTAAAAGAAG+AGG | 0.550202 | 7.3:+44556122 | MS.gene64556:CDS |
GGTTTGGTAATAGTAACAGC+TGG | 0.553789 | 7.3:+44559316 | MS.gene64556:CDS |
AAATGCATACTTGACCATCT+GGG | 0.554455 | 7.3:-44557476 | None:intergenic |
CATTCTGACCTTAGCATCAA+GGG | 0.555472 | 7.3:-44557382 | None:intergenic |
CCGGCTTCCGGTGTTTGGCG+GGG | 0.556696 | 7.3:-44555308 | None:intergenic |
AATATTAAAGGTGTAGCAAG+TGG | 0.559018 | 7.3:+44556161 | MS.gene64556:CDS |
GGTTATGAGTATGAGAGCTG+AGG | 0.559301 | 7.3:+44556439 | MS.gene64556:CDS |
TATAAATAGAATTATTGTGA+GGG | 0.561588 | 7.3:+44555788 | MS.gene64556:CDS |
TGGAAGTAAAAGAGGAGGAG+GGG | 0.562516 | 7.3:+44556559 | MS.gene64556:CDS |
CCTTTCACCCCGCCAAACAC+CGG | 0.564577 | 7.3:+44555301 | MS.gene64556:CDS |
ATGATGATTATGAAGATAGC+CGG | 0.565409 | 7.3:+44555253 | MS.gene64556:CDS |
GTGTTTGGCGGGGTGAAAGG+AGG | 0.565622 | 7.3:-44555298 | None:intergenic |
GTTACCATCGGTGACGCCGA+TGG | 0.566124 | 7.3:-44555840 | None:intergenic |
TTTGGATTGCCAAGAAGGAT+GGG | 0.566696 | 7.3:+44559370 | MS.gene64556:CDS |
TGATGAACCGGAACTTCTGG+TGG | 0.570235 | 7.3:-44558899 | None:intergenic |
CTCTGTCAGGCATTTACCAT+CGG | 0.574228 | 7.3:+44555824 | MS.gene64556:CDS |
CACTTTGCGAAAGCGATGCA+GGG | 0.576227 | 7.3:-44559015 | None:intergenic |
TATAAACTGATTATGTCCAA+TGG | 0.576426 | 7.3:-44556015 | None:intergenic |
GGCTGCTCCGGGATCCATCA+CGG | 0.584179 | 7.3:+44555377 | MS.gene64556:CDS |
AGAAGAAGAAGCTAAGTCAT+CGG | 0.585270 | 7.3:-44555223 | None:intergenic |
TTGGGAAGTTCAAGAATGTG+AGG | 0.586749 | 7.3:+44556418 | MS.gene64556:CDS |
AATACGGTGAAAACGGAACG+TGG | 0.587580 | 7.3:+44555934 | MS.gene64556:CDS |
TTTACCATCGGCGTCACCGA+TGG | 0.592998 | 7.3:+44555836 | MS.gene64556:CDS |
CGAACTAGGACATATGAAGC+AGG | 0.598619 | 7.3:-44555627 | None:intergenic |
AGAAGCTAAGTCATCGGGGA+CGG | 0.598860 | 7.3:-44555217 | None:intergenic |
AGCTAAGTCATCGGGGACGG+CGG | 0.600920 | 7.3:-44555214 | None:intergenic |
AAGAGTTTCAAGCACATGAA+GGG | 0.602685 | 7.3:+44556321 | MS.gene64556:CDS |
ATGTTTCAGTAGCAATACCT+TGG | 0.603701 | 7.3:+44558855 | MS.gene64556:CDS |
CTCTACAAAATTAAGAAAGG+AGG | 0.604496 | 7.3:+44555680 | MS.gene64556:CDS |
GGAGCAATGCCCGTAGCCGG+TGG | 0.605418 | 7.3:-44555336 | None:intergenic |
GATTGCCAAGAAGGATGGGT+AGG | 0.605519 | 7.3:+44559374 | MS.gene64556:CDS |
AACAGGTAAACAGTTAACAA+TGG | 0.610956 | 7.3:+44555977 | MS.gene64556:CDS |
GAAGACCAAGATGAACCTGA+TGG | 0.612878 | 7.3:-44559244 | None:intergenic |
CGATGGTAACATCCAGCTCA+GGG | 0.615361 | 7.3:+44555853 | MS.gene64556:CDS |
AATGCATACTTGACCATCTG+GGG | 0.615540 | 7.3:-44557475 | None:intergenic |
GCTGTTTCTTACACCCCAGA+TGG | 0.618138 | 7.3:+44557462 | MS.gene64556:CDS |
CCTTTGATCATAAATGGCCA+AGG | 0.619143 | 7.3:-44558872 | None:intergenic |
ACGCTGACCATGAATTGGGA+CGG | 0.619248 | 7.3:+44555135 | MS.gene64556:CDS |
CGATGGCCACCATGGAACGC+CGG | 0.619741 | 7.3:+44555109 | None:intergenic |
TGATTCCAGGATAAGAATTG+TGG | 0.621189 | 7.3:+44558348 | MS.gene64556:CDS |
CATAGGGTTGAATTGAACAC+AGG | 0.624619 | 7.3:-44557334 | None:intergenic |
ATTACCAAACCCCATGCTGA+AGG | 0.626935 | 7.3:-44559304 | None:intergenic |
TCCAAACTATGATATATGGA+TGG | 0.626995 | 7.3:+44555356 | MS.gene64556:CDS |
TTGATCAAAATAAATCTCAA+GGG | 0.629899 | 7.3:+44556228 | MS.gene64556:CDS |
CCTGAGCTGGATGTTACCAT+CGG | 0.632138 | 7.3:-44555852 | None:intergenic |
AAATTTGGAAGTAAAAGAGG+AGG | 0.636162 | 7.3:+44556554 | MS.gene64556:CDS |
AGTCGTCCTCGTCGTCGCCG+AGG | 0.641675 | 7.3:-44555158 | None:intergenic |
CCGGTTATCCTTCGCCTCTG+CGG | 0.648746 | 7.3:+44555272 | MS.gene64556:CDS |
ATATAAATAGAATTATTGTG+AGG | 0.648824 | 7.3:+44555787 | MS.gene64556:CDS |
TGCTGAAGGATGAACTGCTG+AGG | 0.649358 | 7.3:-44559290 | None:intergenic |
TTCTAGTTGGAACACAAAAG+GGG | 0.650453 | 7.3:+44557953 | MS.gene64556:CDS |
TCCAGGATAAGAATTGTGGA+TGG | 0.656965 | 7.3:+44558352 | MS.gene64556:CDS |
GGACGGCCTCGGCGACGACG+AGG | 0.661405 | 7.3:+44555152 | MS.gene64556:CDS |
CGATGGTAAATGCCTGACAG+AGG | 0.669570 | 7.3:-44555823 | None:intergenic |
TTGATGCTAAGGTCAGAATG+TGG | 0.670338 | 7.3:+44557385 | MS.gene64556:CDS |
GTGAAAGGAGGAGACCGCAG+AGG | 0.675268 | 7.3:-44555286 | None:intergenic |
AAGAAGAAGCTAAGTCATCG+GGG | 0.744762 | 7.3:-44555221 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTAAAATATAAAGTAG+AGG | - | chr7.3:44557507-44557526 | None:intergenic | 10.0% |
!!! | ATATTTTGTTAGAAAATTTA+TGG | - | chr7.3:44557724-44557743 | None:intergenic | 10.0% |
!!! | TATTTTGTTAGAAAATTTAT+GGG | - | chr7.3:44557723-44557742 | None:intergenic | 10.0% |
!! | AATTATCAACTTTCTTAATT+AGG | + | chr7.3:44557523-44557542 | MS.gene64556:intron | 15.0% |
!! | ATATAAATAGAATTATTGTG+AGG | + | chr7.3:44555787-44555806 | MS.gene64556:CDS | 15.0% |
!! | ATGTAATATTGATACATTAT+AGG | + | chr7.3:44557760-44557779 | MS.gene64556:intron | 15.0% |
!! | TAACTAAACAAATTAGAATT+TGG | - | chr7.3:44557834-44557853 | None:intergenic | 15.0% |
!! | TATAAATAGAATTATTGTGA+GGG | + | chr7.3:44555788-44555807 | MS.gene64556:CDS | 15.0% |
!! | TATTATTAAGCAAGTATAAA+GGG | - | chr7.3:44558421-44558440 | None:intergenic | 15.0% |
!! | TCATTATTGAAGAATATTAA+AGG | + | chr7.3:44556149-44556168 | MS.gene64556:CDS | 15.0% |
!! | CAAAGTTTAATGATTTATGT+TGG | + | chr7.3:44557908-44557927 | MS.gene64556:intron | 20.0% |
!! | CTTATATATCAAGAAGTTTA+AGG | + | chr7.3:44556105-44556124 | MS.gene64556:CDS | 20.0% |
!! | CTTATTATAAATCTTCCATT+TGG | - | chr7.3:44558719-44558738 | None:intergenic | 20.0% |
!! | GAAGTTGTTCATAAATTTAA+AGG | + | chr7.3:44558379-44558398 | MS.gene64556:CDS | 20.0% |
!! | GTATTATTAAGCAAGTATAA+AGG | - | chr7.3:44558422-44558441 | None:intergenic | 20.0% |
!! | TTAATCAAAAATCTAGATAC+TGG | + | chr7.3:44555891-44555910 | MS.gene64556:CDS | 20.0% |
!! | TTCTAACAAAATATACACTT+GGG | + | chr7.3:44557730-44557749 | MS.gene64556:intron | 20.0% |
!! | TTGACTAATAAAAAACACAT+TGG | - | chr7.3:44557695-44557714 | None:intergenic | 20.0% |
!! | TTGATCAAAATAAATCTCAA+GGG | + | chr7.3:44556228-44556247 | MS.gene64556:CDS | 20.0% |
!! | TTTCTAACAAAATATACACT+TGG | + | chr7.3:44557729-44557748 | MS.gene64556:intron | 20.0% |
!!! | AAATATATTTTTGCATGCTT+TGG | - | chr7.3:44557618-44557637 | None:intergenic | 20.0% |
!!! | ATAAGATGTTATCAGAATTT+TGG | + | chr7.3:44559352-44559371 | MS.gene64556:CDS | 20.0% |
!!! | CTTTTGTTTTGATAATAACA+AGG | + | chr7.3:44556729-44556748 | MS.gene64556:intron | 20.0% |
!!! | GAAAAAGTAAAAACATTTTC+AGG | - | chr7.3:44556611-44556630 | None:intergenic | 20.0% |
!!! | GAATTTTACTTAATTGGATA+TGG | + | chr7.3:44557305-44557324 | MS.gene64556:intron | 20.0% |
!!! | GGAAATGAATTTTACTTAAT+TGG | + | chr7.3:44557299-44557318 | MS.gene64556:intron | 20.0% |
!!! | GTTTGAGTTAATTTATAATC+TGG | - | chr7.3:44558139-44558158 | None:intergenic | 20.0% |
!!! | TTCTTTTTGGTATATCTTAT+TGG | + | chr7.3:44557264-44557283 | MS.gene64556:intron | 20.0% |
!!! | TTTTGTTATTTAAATGTGTG+AGG | + | chr7.3:44557554-44557573 | MS.gene64556:intron | 20.0% |
! | AAATGTTGATACTCATAGTA+TGG | + | chr7.3:44556517-44556536 | MS.gene64556:CDS | 25.0% |
! | AAGATTCACAAGTATATGTA+TGG | + | chr7.3:44558747-44558766 | MS.gene64556:CDS | 25.0% |
! | AATTGAATACAATGACATGT+AGG | - | chr7.3:44558590-44558609 | None:intergenic | 25.0% |
! | ACAAGAACTAATACTGATAT+AGG | + | chr7.3:44555735-44555754 | MS.gene64556:CDS | 25.0% |
! | AGGATAAAGTGATACATATT+TGG | + | chr7.3:44556399-44556418 | MS.gene64556:CDS | 25.0% |
! | ATAGTATGGTTAAGAAGAAA+GGG | + | chr7.3:44556531-44556550 | MS.gene64556:CDS | 25.0% |
! | ATGAAATAATCTTCATCCAT+AGG | - | chr7.3:44557354-44557373 | None:intergenic | 25.0% |
! | GAGTTTATTGTAAAGGAATA+CGG | + | chr7.3:44555918-44555937 | MS.gene64556:CDS | 25.0% |
! | GATGAAGATTATTTCATTAG+TGG | + | chr7.3:44557357-44557376 | MS.gene64556:CDS | 25.0% |
! | GGATAAAGTGATACATATTT+GGG | + | chr7.3:44556400-44556419 | MS.gene64556:CDS | 25.0% |
! | GGTATTTCATTATGAAAATG+TGG | + | chr7.3:44556992-44557011 | MS.gene64556:intron | 25.0% |
! | GTTCTCTACAAAATTAAGAA+AGG | + | chr7.3:44555677-44555696 | MS.gene64556:CDS | 25.0% |
! | GTTGATCAAAATAAATCTCA+AGG | + | chr7.3:44556227-44556246 | MS.gene64556:CDS | 25.0% |
! | TAATTCATCTTCATCTTCTT+CGG | + | chr7.3:44555548-44555567 | MS.gene64556:CDS | 25.0% |
! | TACAATTCTATCAGAATTGT+CGG | - | chr7.3:44558549-44558568 | None:intergenic | 25.0% |
! | TAGGAAAAATTTCAAAGCAA+AGG | + | chr7.3:44555709-44555728 | MS.gene64556:CDS | 25.0% |
! | TATAAACTGATTATGTCCAA+TGG | - | chr7.3:44556018-44556037 | None:intergenic | 25.0% |
! | TCTAACAAAATATACACTTG+GGG | + | chr7.3:44557731-44557750 | MS.gene64556:intron | 25.0% |
! | TCTAATTATTCAGCATATGA+TGG | + | chr7.3:44559265-44559284 | MS.gene64556:CDS | 25.0% |
! | TCTTGACATAAAGCAATATT+GGG | - | chr7.3:44558257-44558276 | None:intergenic | 25.0% |
! | TGAAATAATCTTCATCCATA+GGG | - | chr7.3:44557353-44557372 | None:intergenic | 25.0% |
! | TGGAAAAGAGTTTATTGTAA+AGG | + | chr7.3:44555911-44555930 | MS.gene64556:CDS | 25.0% |
! | TTAAGGTTAAGTAAAAGAAG+AGG | + | chr7.3:44556122-44556141 | MS.gene64556:CDS | 25.0% |
! | TTCTTGACATAAAGCAATAT+TGG | - | chr7.3:44558258-44558277 | None:intergenic | 25.0% |
! | TTCTTTGCACATAATGATTA+CGG | + | chr7.3:44557199-44557218 | MS.gene64556:CDS | 25.0% |
! | TTGGACTATTAAGTTTAGTT+TGG | + | chr7.3:44556349-44556368 | MS.gene64556:CDS | 25.0% |
!! | AAACCTTATTGTTCTTTTCA+TGG | + | chr7.3:44556635-44556654 | MS.gene64556:CDS | 25.0% |
!! | AATGATCTGATTTTTGTTGA+GGG | - | chr7.3:44555605-44555624 | None:intergenic | 25.0% |
!!! | ACTATTAAGTTTAGTTTGGA+TGG | + | chr7.3:44556353-44556372 | MS.gene64556:CDS | 25.0% |
!!! | CTTTACTTCAAAGTTTTGTA+TGG | + | chr7.3:44556851-44556870 | MS.gene64556:intron | 25.0% |
!!! | GTGAACTAAGTTTTAACTTA+TGG | + | chr7.3:44556793-44556812 | MS.gene64556:intron | 25.0% |
!!! | TATTTTTTTGTTAGCCGATT+TGG | + | chr7.3:44557633-44557652 | MS.gene64556:intron | 25.0% |
!!! | TTATTTTGATCAACAACTTG+TGG | - | chr7.3:44556221-44556240 | None:intergenic | 25.0% |
AAATCACAACCTCAACAATT+AGG | - | chr7.3:44556769-44556788 | None:intergenic | 30.0% | |
AAATTTGGAAGTAAAAGAGG+AGG | + | chr7.3:44556554-44556573 | MS.gene64556:CDS | 30.0% | |
AACAGGTAAACAGTTAACAA+TGG | + | chr7.3:44555977-44555996 | MS.gene64556:CDS | 30.0% | |
AATCTCAAGGGAAGAATAAA+TGG | + | chr7.3:44556240-44556259 | MS.gene64556:CDS | 30.0% | |
ACATGATTATTGCCTTTCTT+TGG | - | chr7.3:44558962-44558981 | None:intergenic | 30.0% | |
ATAATGAGACGACGTAATTA+CGG | + | chr7.3:44556044-44556063 | MS.gene64556:CDS | 30.0% | |
ATCTCAAGGGAAGAATAAAT+GGG | + | chr7.3:44556241-44556260 | MS.gene64556:CDS | 30.0% | |
ATGATGATTATGAAGATAGC+CGG | + | chr7.3:44555253-44555272 | MS.gene64556:CDS | 30.0% | |
CATAGTATGGTTAAGAAGAA+AGG | + | chr7.3:44556530-44556549 | MS.gene64556:CDS | 30.0% | |
CTCTACAAAATTAAGAAAGG+AGG | + | chr7.3:44555680-44555699 | MS.gene64556:CDS | 30.0% | |
GAAAAGACAACATTGCAAAA+TGG | - | chr7.3:44557247-44557266 | None:intergenic | 30.0% | |
GAAATCAAAGAAGGATGAAT+AGG | - | chr7.3:44556479-44556498 | None:intergenic | 30.0% | |
GAAGAATTTGAAAACACCAT+TGG | + | chr7.3:44555999-44556018 | MS.gene64556:CDS | 30.0% | |
GAATTTGGCAAACAATCATT+TGG | - | chr7.3:44557819-44557838 | None:intergenic | 30.0% | |
GATTACATTCCTAATTGTTG+AGG | + | chr7.3:44556757-44556776 | MS.gene64556:intron | 30.0% | |
GTTAAGAAGAAAGGGAAATT+TGG | + | chr7.3:44556539-44556558 | MS.gene64556:CDS | 30.0% | |
TCCAAACTATGATATATGGA+TGG | + | chr7.3:44555356-44555375 | MS.gene64556:CDS | 30.0% | |
TCCATAGAAGAAATCAAAGA+AGG | - | chr7.3:44556488-44556507 | None:intergenic | 30.0% | |
TCTCAGCTAAAAAAAGTTAC+TGG | + | chr7.3:44558190-44558209 | MS.gene64556:CDS | 30.0% | |
TCTTATTGGAGATATCTTGT+TGG | + | chr7.3:44557278-44557297 | MS.gene64556:intron | 30.0% | |
TGACCATGAAAAGAACAATA+AGG | - | chr7.3:44556641-44556660 | None:intergenic | 30.0% | |
TGGTTAGCATATAGAAATGA+TGG | - | chr7.3:44558119-44558138 | None:intergenic | 30.0% | |
TGGTTTCTTAAATATGTGAG+AGG | - | chr7.3:44557799-44557818 | None:intergenic | 30.0% | |
TTAACTTATGGTCAAACATG+TGG | + | chr7.3:44556805-44556824 | MS.gene64556:intron | 30.0% | |
TTAAGAAAGGAGGAAATCAT+AGG | + | chr7.3:44555690-44555709 | MS.gene64556:CDS | 30.0% | |
TTGCTCCAAACTATGATATA+TGG | + | chr7.3:44555352-44555371 | MS.gene64556:CDS | 30.0% | |
TTGGACTGATATTCATGAAA+TGG | + | chr7.3:44557434-44557453 | MS.gene64556:CDS | 30.0% | |
! | AATATTAAAGGTGTAGCAAG+TGG | + | chr7.3:44556161-44556180 | MS.gene64556:CDS | 30.0% |
! | ATGATCTGATTTTTGTTGAG+GGG | - | chr7.3:44555604-44555623 | None:intergenic | 30.0% |
! | GAATGATCTGATTTTTGTTG+AGG | - | chr7.3:44555606-44555625 | None:intergenic | 30.0% |
! | GCAATGTTGTCTTTTCTTTT+TGG | + | chr7.3:44557251-44557270 | MS.gene64556:intron | 30.0% |
! | TCCTTCTTTGATTTCTTCTA+TGG | + | chr7.3:44556484-44556503 | MS.gene64556:CDS | 30.0% |
! | TTCTTTTTGGATTGATGAAC+CGG | - | chr7.3:44558914-44558933 | None:intergenic | 30.0% |
! | TTGTTCTTTTCATGGTCATT+TGG | + | chr7.3:44556643-44556662 | MS.gene64556:CDS | 30.0% |
!! | AAAAAAAGTTACTGGCTTTC+AGG | + | chr7.3:44558198-44558217 | MS.gene64556:CDS | 30.0% |
!! | TTAAGTTTAGTTTGGATGGA+AGG | + | chr7.3:44556357-44556376 | MS.gene64556:CDS | 30.0% |
!! | TTCAAAGTTTTGTATGGTGT+GGG | + | chr7.3:44556857-44556876 | MS.gene64556:intron | 30.0% |
!!! | ATGAAGTTTTGGATTTGTCT+TGG | + | chr7.3:44556666-44556685 | MS.gene64556:CDS | 30.0% |
!!! | TGGTTTTGTTCATTGTTGTA+GGG | + | chr7.3:44557928-44557947 | MS.gene64556:intron | 30.0% |
!!! | TTGGTTTTGTTCATTGTTGT+AGG | + | chr7.3:44557927-44557946 | MS.gene64556:intron | 30.0% |
AAAATGCATACTTGACCATC+TGG | - | chr7.3:44557480-44557499 | None:intergenic | 35.0% | |
AAATGCATACTTGACCATCT+GGG | - | chr7.3:44557479-44557498 | None:intergenic | 35.0% | |
AAGAGTTTCAAGCACATGAA+GGG | + | chr7.3:44556321-44556340 | MS.gene64556:CDS | 35.0% | |
AGAAGAAGAAGCTAAGTCAT+CGG | - | chr7.3:44555226-44555245 | None:intergenic | 35.0% | |
AGAATCAAGAAACTCCTGTT+TGG | + | chr7.3:44555508-44555527 | MS.gene64556:CDS | 35.0% | |
AGAATTATTGTGAGGGATTC+TGG | + | chr7.3:44555795-44555814 | MS.gene64556:CDS | 35.0% | |
AGTGAAGTAGAAGAAGATCA+TGG | + | chr7.3:44559121-44559140 | MS.gene64556:CDS | 35.0% | |
ATGTTTCAGTAGCAATACCT+TGG | + | chr7.3:44558855-44558874 | MS.gene64556:CDS | 35.0% | |
CGTAATTACGGAAGAAATGA+TGG | + | chr7.3:44556056-44556075 | MS.gene64556:CDS | 35.0% | |
CTAACAGAATTTGACCAAAC+AGG | - | chr7.3:44555525-44555544 | None:intergenic | 35.0% | |
GAGCATAGAAATTCAAGTAC+AGG | + | chr7.3:44558779-44558798 | MS.gene64556:CDS | 35.0% | |
GATGGTTATGGTAAAAAGCT+AGG | + | chr7.3:44556074-44556093 | MS.gene64556:CDS | 35.0% | |
GCAAATACTACAACTTCATC+TGG | + | chr7.3:44555576-44555595 | MS.gene64556:CDS | 35.0% | |
GCCATCCATATATCATAGTT+TGG | - | chr7.3:44555360-44555379 | None:intergenic | 35.0% | |
GCTACTACTTTCATCTTCAA+TGG | + | chr7.3:44557129-44557148 | MS.gene64556:intron | 35.0% | |
GCTACTGAAACATCTTTACA+TGG | - | chr7.3:44558848-44558867 | None:intergenic | 35.0% | |
GGCAATAATCATGTAACAGA+AGG | + | chr7.3:44558968-44558987 | MS.gene64556:CDS | 35.0% | |
GGGAAATTTGGAAGTAAAAG+AGG | + | chr7.3:44556551-44556570 | MS.gene64556:CDS | 35.0% | |
GTAAAGGAATACGGTGAAAA+CGG | + | chr7.3:44555927-44555946 | MS.gene64556:CDS | 35.0% | |
GTAATAGTAACAGCTGGATT+TGG | + | chr7.3:44559322-44559341 | MS.gene64556:CDS | 35.0% | |
GTCAGTTAAATGTATGTGTC+CGG | + | chr7.3:44558643-44558662 | MS.gene64556:intron | 35.0% | |
TACGGAAGAAATGATGGTTA+TGG | + | chr7.3:44556062-44556081 | MS.gene64556:CDS | 35.0% | |
TGACATAAAGCAATATTGGG+TGG | - | chr7.3:44558254-44558273 | None:intergenic | 35.0% | |
TGATTCCAGGATAAGAATTG+TGG | + | chr7.3:44558348-44558367 | MS.gene64556:CDS | 35.0% | |
! | AGAATTTTGGATTGCCAAGA+AGG | + | chr7.3:44559365-44559384 | MS.gene64556:CDS | 35.0% |
! | GTTCTAGTTGGAACACAAAA+GGG | + | chr7.3:44557952-44557971 | MS.gene64556:CDS | 35.0% |
! | TAGTTTGGATGGAAGGTTTT+TGG | + | chr7.3:44556364-44556383 | MS.gene64556:CDS | 35.0% |
! | TGGTCATTTGGATGAAGTTT+TGG | + | chr7.3:44556655-44556674 | MS.gene64556:CDS | 35.0% |
! | TGTTCTAGTTGGAACACAAA+AGG | + | chr7.3:44557951-44557970 | MS.gene64556:CDS | 35.0% |
! | TTATTACTTCAGCTGATTCC+AGG | + | chr7.3:44558335-44558354 | MS.gene64556:CDS | 35.0% |
! | TTATTGCCTTTCTTTGGAAG+AGG | - | chr7.3:44558956-44558975 | None:intergenic | 35.0% |
! | TTCTAGTTGGAACACAAAAG+GGG | + | chr7.3:44557953-44557972 | MS.gene64556:CDS | 35.0% |
!! | AAGATCATGGAGCTATTTCT+AGG | + | chr7.3:44559134-44559153 | MS.gene64556:CDS | 35.0% |
!! | AGGGAAGAATAAATGGGTTA+AGG | + | chr7.3:44556247-44556266 | MS.gene64556:CDS | 35.0% |
!! | ATCATCAGTATTGACGTGTA+TGG | + | chr7.3:44556940-44556959 | MS.gene64556:intron | 35.0% |
!! | CTATTTCTAGGACGAATTCA+GGG | + | chr7.3:44559146-44559165 | MS.gene64556:CDS | 35.0% |
!! | CTTCAAAGTTTTGTATGGTG+TGG | + | chr7.3:44556856-44556875 | MS.gene64556:intron | 35.0% |
!! | GATTCTGCATCGATTAGATA+TGG | + | chr7.3:44559190-44559209 | MS.gene64556:CDS | 35.0% |
!!! | CATTCGTTTCGAGTTCTTTT+TGG | - | chr7.3:44558927-44558946 | None:intergenic | 35.0% |
!!! | GTTCTCGAATTTTTTCGTGA+TGG | - | chr7.3:44555487-44555506 | None:intergenic | 35.0% |
!!! | TTGTTGGTTTTCTTTGGAAG+AGG | - | chr7.3:44559088-44559107 | None:intergenic | 35.0% |
AAGAAGAAGCTAAGTCATCG+GGG | - | chr7.3:44555224-44555243 | None:intergenic | 40.0% | |
AAGGGGAATTGTCGTACTTA+TGG | + | chr7.3:44557970-44557989 | MS.gene64556:CDS | 40.0% | |
AATGCATACTTGACCATCTG+GGG | - | chr7.3:44557478-44557497 | None:intergenic | 40.0% | |
ACATTCTGACCTTAGCATCA+AGG | - | chr7.3:44557386-44557405 | None:intergenic | 40.0% | |
ACCATCCACAATTCTTATCC+TGG | - | chr7.3:44558356-44558375 | None:intergenic | 40.0% | |
ACGAAGATTGCTTGGAAGTA+TGG | + | chr7.3:44555407-44555426 | MS.gene64556:CDS | 40.0% | |
ATAGTAACAGCTGGATTTGG+AGG | + | chr7.3:44559325-44559344 | MS.gene64556:CDS | 40.0% | |
ATGGTGTCTAGTGTTTGTGT+CGG | + | chr7.3:44556971-44556990 | MS.gene64556:intron | 40.0% | |
CAAGAGTTTCAAGCACATGA+AGG | + | chr7.3:44556320-44556339 | MS.gene64556:CDS | 40.0% | |
CATAGGGTTGAATTGAACAC+AGG | - | chr7.3:44557337-44557356 | None:intergenic | 40.0% | |
CATTCTGACCTTAGCATCAA+GGG | - | chr7.3:44557385-44557404 | None:intergenic | 40.0% | |
CCTTGGCCATTTATGATCAA+AGG | + | chr7.3:44558872-44558891 | MS.gene64556:CDS | 40.0% | |
CCTTTGATCATAAATGGCCA+AGG | - | chr7.3:44558875-44558894 | None:intergenic | 40.0% | |
CGGTTAAGCGATTTAGAAAC+AGG | + | chr7.3:44555960-44555979 | MS.gene64556:CDS | 40.0% | |
CTGTGTTCAATTCAACCCTA+TGG | + | chr7.3:44557335-44557354 | MS.gene64556:CDS | 40.0% | |
CTGTTTGCATTTCGAAATCC+TGG | - | chr7.3:44558674-44558693 | None:intergenic | 40.0% | |
GAAAACGCTGACCATGAATT+GGG | + | chr7.3:44555131-44555150 | MS.gene64556:CDS | 40.0% | |
GAAAGAAGACGAAGATTGCT+TGG | + | chr7.3:44555399-44555418 | MS.gene64556:CDS | 40.0% | |
GAAGAAGAAGCTAAGTCATC+GGG | - | chr7.3:44555225-44555244 | None:intergenic | 40.0% | |
GAAGTAATAAGCACTTCTGC+TGG | - | chr7.3:44558325-44558344 | None:intergenic | 40.0% | |
GACTAAATGATGCTGCCATT+TGG | - | chr7.3:44558697-44558716 | None:intergenic | 40.0% | |
GCAGCATCATTTAGTCCAAA+TGG | + | chr7.3:44558701-44558720 | MS.gene64556:CDS | 40.0% | |
GGACAAGACAGTGAGATTAT+GGG | + | chr7.3:44557150-44557169 | MS.gene64556:CDS | 40.0% | |
GGATCGCCTTTGATCATAAA+TGG | - | chr7.3:44558881-44558900 | None:intergenic | 40.0% | |
GGGTTAAGGTTAGACAAAGT+GGG | + | chr7.3:44556261-44556280 | MS.gene64556:CDS | 40.0% | |
TCAGGCACATGAACATATTC+AGG | - | chr7.3:44556593-44556612 | None:intergenic | 40.0% | |
TCCAGGATAAGAATTGTGGA+TGG | + | chr7.3:44558352-44558371 | MS.gene64556:CDS | 40.0% | |
TCGAAATGCAAACAGCCAAA+TGG | + | chr7.3:44558679-44558698 | MS.gene64556:CDS | 40.0% | |
TCGCAAAGTGAATCAGGAAT+AGG | + | chr7.3:44559028-44559047 | MS.gene64556:CDS | 40.0% | |
TGGACAAGACAGTGAGATTA+TGG | + | chr7.3:44557149-44557168 | MS.gene64556:CDS | 40.0% | |
TGGGTTAAGGTTAGACAAAG+TGG | + | chr7.3:44556260-44556279 | MS.gene64556:CDS | 40.0% | |
TGTCGTACTTATGGCATAGA+AGG | + | chr7.3:44557979-44557998 | MS.gene64556:CDS | 40.0% | |
TTGATGCTAAGGTCAGAATG+TGG | + | chr7.3:44557385-44557404 | MS.gene64556:CDS | 40.0% | |
TTGGAAGTAAAAGAGGAGGA+GGG | + | chr7.3:44556558-44556577 | MS.gene64556:CDS | 40.0% | |
TTGGGAAGTTCAAGAATGTG+AGG | + | chr7.3:44556418-44556437 | MS.gene64556:CDS | 40.0% | |
TTTCGAAATCCTGGTTTCAC+CGG | - | chr7.3:44558665-44558684 | None:intergenic | 40.0% | |
TTTGGAAGTAAAAGAGGAGG+AGG | + | chr7.3:44556557-44556576 | MS.gene64556:CDS | 40.0% | |
TTTGGATTGCCAAGAAGGAT+GGG | + | chr7.3:44559370-44559389 | MS.gene64556:CDS | 40.0% | |
TTTGTCTTGGTCTAGATCTC+AGG | + | chr7.3:44556679-44556698 | MS.gene64556:CDS | 40.0% | |
! | AAGCACATGAAGGGTGTATT+TGG | + | chr7.3:44556330-44556349 | MS.gene64556:CDS | 40.0% |
! | AATTCATGGTCAGCGTTTTC+CGG | - | chr7.3:44555131-44555150 | None:intergenic | 40.0% |
! | ATTGCTTGGAAGTATGGGAT+TGG | + | chr7.3:44555413-44555432 | MS.gene64556:CDS | 40.0% |
! | CGAAGATTGCTTGGAAGTAT+GGG | + | chr7.3:44555408-44555427 | MS.gene64556:CDS | 40.0% |
! | GGTTTGGTAATAGTAACAGC+TGG | + | chr7.3:44559316-44559335 | MS.gene64556:CDS | 40.0% |
! | GTTTGGCGATTCGTTTTCTT+CGG | + | chr7.3:44559168-44559187 | MS.gene64556:CDS | 40.0% |
! | TTGTTGTAGGGTGTTCTAGT+TGG | + | chr7.3:44557940-44557959 | MS.gene64556:intron | 40.0% |
! | TTTTGGATTGCCAAGAAGGA+TGG | + | chr7.3:44559369-44559388 | MS.gene64556:CDS | 40.0% |
!! | GCTATTTCTAGGACGAATTC+AGG | + | chr7.3:44559145-44559164 | MS.gene64556:CDS | 40.0% |
!! | TTGGTTTTCTTTGGAAGAGG+TGG | - | chr7.3:44559085-44559104 | None:intergenic | 40.0% |
AATACGGTGAAAACGGAACG+TGG | + | chr7.3:44555934-44555953 | MS.gene64556:CDS | 45.0% | |
AGCACTTCTGCTGGATTACA+TGG | - | chr7.3:44558316-44558335 | None:intergenic | 45.0% | |
AGCAGTTCATCCTTCAGCAT+GGG | + | chr7.3:44559294-44559313 | MS.gene64556:CDS | 45.0% | |
ATCACATCCGTGGACCAAAT+CGG | - | chr7.3:44557650-44557669 | None:intergenic | 45.0% | |
ATGAGTATGAGAGCTGAGGA+AGG | + | chr7.3:44556443-44556462 | MS.gene64556:CDS | 45.0% | |
ATTACCAAACCCCATGCTGA+AGG | - | chr7.3:44559307-44559326 | None:intergenic | 45.0% | |
CGAACTAGGACATATGAAGC+AGG | - | chr7.3:44555630-44555649 | None:intergenic | 45.0% | |
CTACTCCATCAGGTTCATCT+TGG | + | chr7.3:44559239-44559258 | MS.gene64556:CDS | 45.0% | |
CTCTGTCAGGCATTTACCAT+CGG | + | chr7.3:44555824-44555843 | MS.gene64556:CDS | 45.0% | |
CTTCCACCTCTTCCAAAGAA+AGG | + | chr7.3:44558947-44558966 | MS.gene64556:CDS | 45.0% | |
CTTGGTCTAGATCTCAGGTA+TGG | + | chr7.3:44556684-44556703 | MS.gene64556:intron | 45.0% | |
GAAGACCAAGATGAACCTGA+TGG | - | chr7.3:44559247-44559266 | None:intergenic | 45.0% | |
GACAGTGAGATTATGGGACT+TGG | + | chr7.3:44557156-44557175 | MS.gene64556:CDS | 45.0% | |
GATTGATGAACCGGAACTTC+TGG | - | chr7.3:44558905-44558924 | None:intergenic | 45.0% | |
GGAAAACGCTGACCATGAAT+TGG | + | chr7.3:44555130-44555149 | MS.gene64556:CDS | 45.0% | |
GGTGTAGCAAGTGGAATTGT+TGG | + | chr7.3:44556170-44556189 | MS.gene64556:CDS | 45.0% | |
GGTTATGAGTATGAGAGCTG+AGG | + | chr7.3:44556439-44556458 | MS.gene64556:CDS | 45.0% | |
GTGAAAACGGAACGTGGAAT+CGG | + | chr7.3:44555940-44555959 | MS.gene64556:CDS | 45.0% | |
TAGTGGTTCCCTTGATGCTA+AGG | + | chr7.3:44557374-44557393 | MS.gene64556:CDS | 45.0% | |
TCGCTTTCGCAAAGTGAATC+AGG | + | chr7.3:44559022-44559041 | MS.gene64556:CDS | 45.0% | |
TCTAATGCAGCTACTCCATC+AGG | + | chr7.3:44559229-44559248 | MS.gene64556:CDS | 45.0% | |
TCTCCCTAAAATCACATCCG+TGG | - | chr7.3:44557660-44557679 | None:intergenic | 45.0% | |
TCTTCGTCTTCTTTCCGTGA+TGG | - | chr7.3:44555394-44555413 | None:intergenic | 45.0% | |
TGAGTATGAGAGCTGAGGAA+GGG | + | chr7.3:44556444-44556463 | MS.gene64556:CDS | 45.0% | |
TGATATATGGATGGCTGCTC+CGG | + | chr7.3:44555365-44555384 | MS.gene64556:CDS | 45.0% | |
TGGAAGTAAAAGAGGAGGAG+GGG | + | chr7.3:44556559-44556578 | MS.gene64556:CDS | 45.0% | |
! | GGTAGGCAAGCTCATCTTTT+TGG | + | chr7.3:44559391-44559410 | MS.gene64556:CDS | 45.0% |
! | GGTCCACGGATGTGATTTTA+GGG | + | chr7.3:44557654-44557673 | MS.gene64556:intron | 45.0% |
! | TCTAGGACGAATTCAGGGTT+TGG | + | chr7.3:44559151-44559170 | MS.gene64556:CDS | 45.0% |
! | TGGTCCACGGATGTGATTTT+AGG | + | chr7.3:44557653-44557672 | MS.gene64556:intron | 45.0% |
! | TTGCCTTTCTTTGGAAGAGG+TGG | - | chr7.3:44558953-44558972 | None:intergenic | 45.0% |
!! | GACGTGTATGGTGTCATCTA+TGG | + | chr7.3:44556952-44556971 | MS.gene64556:intron | 45.0% |
!! | TTGTTAGCCGATTTGGTCCA+CGG | + | chr7.3:44557640-44557659 | MS.gene64556:intron | 45.0% |
!!! | CGAATTTTTTCGTGATGGCG+CGG | - | chr7.3:44555482-44555501 | None:intergenic | 45.0% |
ACGCTGACCATGAATTGGGA+CGG | + | chr7.3:44555135-44555154 | MS.gene64556:CDS | 50.0% | |
AGAAGCTAAGTCATCGGGGA+CGG | - | chr7.3:44555220-44555239 | None:intergenic | 50.0% | |
CACTTTGCGAAAGCGATGCA+GGG | - | chr7.3:44559018-44559037 | None:intergenic | 50.0% | |
CAGCAGTTCATCCTTCAGCA+TGG | + | chr7.3:44559293-44559312 | MS.gene64556:CDS | 50.0% | |
CCTGAGCTGGATGTTACCAT+CGG | - | chr7.3:44555855-44555874 | None:intergenic | 50.0% | |
CGATGGTAAATGCCTGACAG+AGG | - | chr7.3:44555826-44555845 | None:intergenic | 50.0% | |
CGATGGTAACATCCAGCTCA+GGG | + | chr7.3:44555853-44555872 | MS.gene64556:CDS | 50.0% | |
CTAGTTCGATCGCGATCTGA+AGG | + | chr7.3:44555642-44555661 | MS.gene64556:CDS | 50.0% | |
CTTCAGATCGCGATCGAACT+AGG | - | chr7.3:44555644-44555663 | None:intergenic | 50.0% | |
GATATATGGATGGCTGCTCC+GGG | + | chr7.3:44555366-44555385 | MS.gene64556:CDS | 50.0% | |
GATTGCCAAGAAGGATGGGT+AGG | + | chr7.3:44559374-44559393 | MS.gene64556:CDS | 50.0% | |
GCAGTTCATCCTTCAGCATG+GGG | + | chr7.3:44559295-44559314 | MS.gene64556:CDS | 50.0% | |
TCACTTTGCGAAAGCGATGC+AGG | - | chr7.3:44559019-44559038 | None:intergenic | 50.0% | |
TCATCCTTCAGCATGGGGTT+TGG | + | chr7.3:44559300-44559319 | MS.gene64556:CDS | 50.0% | |
TGATGAACCGGAACTTCTGG+TGG | - | chr7.3:44558902-44558921 | None:intergenic | 50.0% | |
TGCTGAAGGATGAACTGCTG+AGG | - | chr7.3:44559293-44559312 | None:intergenic | 50.0% | |
TGTATGTGTCCGGTGAAACC+AGG | + | chr7.3:44558653-44558672 | MS.gene64556:intron | 50.0% | |
! | ATTCTGGAGACTCCTCTGTC+AGG | + | chr7.3:44555811-44555830 | MS.gene64556:CDS | 50.0% |
! | CATCTCTGCTCGTCTTGTTG+TGG | + | chr7.3:44557410-44557429 | MS.gene64556:CDS | 50.0% |
! | CTGCTCGTCTTGTTGTGGAT+TGG | + | chr7.3:44557415-44557434 | MS.gene64556:CDS | 50.0% |
!! | CTTCTTTCCGTGATGGATCC+CGG | - | chr7.3:44555387-44555406 | None:intergenic | 50.0% |
!! | GCTGTTTCTTACACCCCAGA+TGG | + | chr7.3:44557462-44557481 | MS.gene64556:CDS | 50.0% |
!!! | GGAAGGTTTTTGGCTACTGC+TGG | + | chr7.3:44556374-44556393 | MS.gene64556:CDS | 50.0% |
!!! | GTTTTTGGCTACTGCTGGTG+AGG | + | chr7.3:44556379-44556398 | MS.gene64556:CDS | 50.0% |
AAGTTCCGGCTTCCGGTGTT+TGG | - | chr7.3:44555316-44555335 | None:intergenic | 55.0% | |
ACCATGAATTGGGACGGCCT+CGG | + | chr7.3:44555141-44555160 | MS.gene64556:CDS | 55.0% | |
AGCGATGCAGGGTCATGTTC+TGG | - | chr7.3:44559007-44559026 | None:intergenic | 55.0% | |
AGGCGATCCACCAGAAGTTC+CGG | + | chr7.3:44558892-44558911 | MS.gene64556:CDS | 55.0% | |
CCGATGGTAACATCCAGCTC+AGG | + | chr7.3:44555852-44555871 | MS.gene64556:CDS | 55.0% | |
GCTTGCCTACCCATCCTTCT+TGG | - | chr7.3:44559382-44559401 | None:intergenic | 55.0% | |
GTAACATCCAGCTCAGGGCT+TGG | + | chr7.3:44555858-44555877 | MS.gene64556:CDS | 55.0% | |
TTTACCATCGGCGTCACCGA+TGG | + | chr7.3:44555836-44555855 | MS.gene64556:CDS | 55.0% | |
! | TTTGGAGCAATGCCCGTAGC+CGG | - | chr7.3:44555342-44555361 | None:intergenic | 55.0% |
AGCTAAGTCATCGGGGACGG+CGG | - | chr7.3:44555217-44555236 | None:intergenic | 60.0% | |
CCGCAGAGGCGAAGGATAAC+CGG | - | chr7.3:44555275-44555294 | None:intergenic | 60.0% | |
CCGGTTATCCTTCGCCTCTG+CGG | + | chr7.3:44555272-44555291 | MS.gene64556:CDS | 60.0% | |
CCTTTCACCCCGCCAAACAC+CGG | + | chr7.3:44555301-44555320 | MS.gene64556:CDS | 60.0% | |
GCATGCCGAGCACATGTGCT+CGG | + | chr7.3:44555757-44555776 | MS.gene64556:CDS | 60.0% | |
GGCGGTGGAGAGACGGTTAT+AGG | - | chr7.3:44555199-44555218 | None:intergenic | 60.0% | |
GTGAAAGGAGGAGACCGCAG+AGG | - | chr7.3:44555289-44555308 | None:intergenic | 60.0% | |
GTGTTTGGCGGGGTGAAAGG+AGG | - | chr7.3:44555301-44555320 | None:intergenic | 60.0% | |
GTTACCATCGGTGACGCCGA+TGG | - | chr7.3:44555843-44555862 | None:intergenic | 60.0% | |
TTCCGGCTTCCGGTGTTTGG+CGG | - | chr7.3:44555313-44555332 | None:intergenic | 60.0% | |
! | CAGCGTTTTCCGGCGTTCCA+TGG | - | chr7.3:44555121-44555140 | None:intergenic | 60.0% |
! | CGTTTTCCGGCGTTCCATGG+TGG | - | chr7.3:44555118-44555137 | None:intergenic | 60.0% |
CCCGTAGCCGGTGGAAGTTC+CGG | - | chr7.3:44555330-44555349 | None:intergenic | 65.0% | |
CCGGAAGCCGGAACTTCCAC+CGG | + | chr7.3:44555320-44555339 | MS.gene64556:CDS | 65.0% | |
CCGGTGGAAGTTCCGGCTTC+CGG | - | chr7.3:44555323-44555342 | None:intergenic | 65.0% | |
CCGGTGTTTGGCGGGGTGAA+AGG | - | chr7.3:44555304-44555323 | None:intergenic | 65.0% | |
GAACGCTCCAAGCCCTGAGC+TGG | - | chr7.3:44555868-44555887 | None:intergenic | 65.0% | |
GCCGAGGCCGTCCCAATTCA+TGG | - | chr7.3:44555145-44555164 | None:intergenic | 65.0% | |
GCGTGCCGAGCACATGTGCT+CGG | - | chr7.3:44555765-44555784 | None:intergenic | 65.0% | |
GGCTGCTCCGGGATCCATCA+CGG | + | chr7.3:44555377-44555396 | MS.gene64556:CDS | 65.0% | |
TAAGTCATCGGGGACGGCGG+TGG | - | chr7.3:44555214-44555233 | None:intergenic | 65.0% | |
TCCGGCTTCCGGTGTTTGGC+GGG | - | chr7.3:44555312-44555331 | None:intergenic | 65.0% | |
! | CCGGAACTTCCACCGGCTAC+GGG | + | chr7.3:44555327-44555346 | MS.gene64556:CDS | 65.0% |
! | GCCGGAACTTCCACCGGCTA+CGG | + | chr7.3:44555326-44555345 | MS.gene64556:CDS | 65.0% |
AGTCGTCCTCGTCGTCGCCG+AGG | - | chr7.3:44555161-44555180 | None:intergenic | 70.0% | |
CCCCGCCAAACACCGGAAGC+CGG | + | chr7.3:44555308-44555327 | MS.gene64556:CDS | 70.0% | |
CCGGCTTCCGGTGTTTGGCG+GGG | - | chr7.3:44555311-44555330 | None:intergenic | 70.0% | |
GGAGCAATGCCCGTAGCCGG+TGG | - | chr7.3:44555339-44555358 | None:intergenic | 70.0% | |
GGAGGAGACCGCAGAGGCGA+AGG | - | chr7.3:44555283-44555302 | None:intergenic | 70.0% | |
CGGGGACGGCGGTGGAGAGA+CGG | - | chr7.3:44555206-44555225 | None:intergenic | 75.0% | |
! | GGACGGCCTCGGCGACGACG+AGG | + | chr7.3:44555152-44555171 | MS.gene64556:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 44555111 | 44559426 | 44555111 | ID=MS.gene64556 |
chr7.3 | mRNA | 44555111 | 44559426 | 44555111 | ID=MS.gene64556.t1;Parent=MS.gene64556 |
chr7.3 | exon | 44555111 | 44556700 | 44555111 | ID=MS.gene64556.t1.exon1;Parent=MS.gene64556.t1 |
chr7.3 | CDS | 44555111 | 44556700 | 44555111 | ID=cds.MS.gene64556.t1;Parent=MS.gene64556.t1 |
chr7.3 | exon | 44557130 | 44557220 | 44557130 | ID=MS.gene64556.t1.exon2;Parent=MS.gene64556.t1 |
chr7.3 | CDS | 44557130 | 44557220 | 44557130 | ID=cds.MS.gene64556.t1;Parent=MS.gene64556.t1 |
chr7.3 | exon | 44557331 | 44557488 | 44557331 | ID=MS.gene64556.t1.exon3;Parent=MS.gene64556.t1 |
chr7.3 | CDS | 44557331 | 44557488 | 44557331 | ID=cds.MS.gene64556.t1;Parent=MS.gene64556.t1 |
chr7.3 | exon | 44557949 | 44558000 | 44557949 | ID=MS.gene64556.t1.exon4;Parent=MS.gene64556.t1 |
chr7.3 | CDS | 44557949 | 44558000 | 44557949 | ID=cds.MS.gene64556.t1;Parent=MS.gene64556.t1 |
chr7.3 | exon | 44558140 | 44558219 | 44558140 | ID=MS.gene64556.t1.exon5;Parent=MS.gene64556.t1 |
chr7.3 | CDS | 44558140 | 44558219 | 44558140 | ID=cds.MS.gene64556.t1;Parent=MS.gene64556.t1 |
chr7.3 | exon | 44558307 | 44558400 | 44558307 | ID=MS.gene64556.t1.exon6;Parent=MS.gene64556.t1 |
chr7.3 | CDS | 44558307 | 44558400 | 44558307 | ID=cds.MS.gene64556.t1;Parent=MS.gene64556.t1 |
chr7.3 | exon | 44558675 | 44559426 | 44558675 | ID=MS.gene64556.t1.exon7;Parent=MS.gene64556.t1 |
chr7.3 | CDS | 44558675 | 44559426 | 44558675 | ID=cds.MS.gene64556.t1;Parent=MS.gene64556.t1 |
Gene Sequence |
Protein sequence |