AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene64720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64720.t1 MTR_5g021220 96.019 427 17 0 1 427 65 491 0.0 831
MS.gene64720.t1 MTR_8g076510 73.536 427 99 3 1 427 68 480 0.0 635
MS.gene64720.t1 MTR_8g016180 52.681 429 178 6 1 424 66 474 7.03e-156 449
MS.gene64720.t1 MTR_8g016180 51.261 357 154 4 1 355 66 404 7.99e-124 365
MS.gene64720.t1 MTR_5g082520 38.824 425 240 5 1 423 57 463 8.16e-109 329
MS.gene64720.t1 MTR_3g070380 37.705 427 244 6 1 423 58 466 3.20e-103 315
MS.gene64720.t1 MTR_5g020020 35.664 429 255 7 1 423 65 478 1.44e-96 298
MS.gene64720.t1 MTR_8g077810 37.269 432 247 8 1 423 62 478 3.54e-96 298
MS.gene64720.t1 MTR_7g033040 32.944 428 263 7 1 424 62 469 2.01e-77 248
MS.gene64720.t1 MTR_5g020020 36.103 349 202 7 81 423 71 404 2.84e-76 243
MS.gene64720.t1 MTR_5g010750 31.579 399 258 2 1 399 60 443 1.81e-75 243
MS.gene64720.t1 MTR_3g007320 32.783 424 262 7 1 421 57 460 1.14e-74 241
MS.gene64720.t1 MTR_7g016040 32.624 423 265 6 1 422 57 460 1.67e-74 240
MS.gene64720.t1 MTR_5g010750 31.486 397 257 2 1 397 60 441 1.92e-74 239
MS.gene64720.t1 MTR_6g015910 32.783 424 262 7 1 421 57 460 1.41e-73 238
MS.gene64720.t1 MTR_8g072260 34.043 423 242 10 8 422 69 462 5.38e-70 229
MS.gene64720.t1 MTR_6g069000 29.798 396 252 5 8 397 76 451 5.96e-70 228
MS.gene64720.t1 MTR_6g069000 29.798 396 252 5 8 397 86 461 6.98e-70 228
MS.gene64720.t1 MTR_8g072260 33.907 407 234 9 8 408 69 446 3.30e-66 218
MS.gene64720.t1 MTR_6g034940 30.930 430 276 10 1 425 68 481 2.03e-65 217
MS.gene64720.t1 MTR_4g086130 31.579 418 262 6 8 421 67 464 6.57e-64 213
MS.gene64720.t1 MTR_5g025610 31.043 422 260 8 8 424 67 462 6.64e-61 205
MS.gene64720.t1 MTR_4g086040 31.742 419 261 7 8 421 70 468 2.29e-59 201
MS.gene64720.t1 MTR_8g089800 32.741 394 248 6 8 397 79 459 4.20e-59 201
MS.gene64720.t1 MTR_1g019410 31.915 423 257 10 8 422 67 466 5.83e-59 200
MS.gene64720.t1 MTR_1g037580 30.095 422 272 7 4 422 72 473 7.20e-58 197
MS.gene64720.t1 MTR_5g092150 29.426 401 267 7 1 399 58 444 1.25e-57 196
MS.gene64720.t1 MTR_5g025610 31.061 396 244 7 8 400 67 436 2.19e-57 195
MS.gene64720.t1 MTR_2g031920 31.472 394 247 6 10 397 81 457 1.14e-56 194
MS.gene64720.t1 MTR_3g467130 31.651 436 265 11 1 424 62 476 9.36e-56 191
MS.gene64720.t1 MTR_2g031930 30.886 395 255 6 6 397 75 454 5.87e-55 189
MS.gene64720.t1 MTR_2g031930 29.953 424 267 7 6 426 79 475 1.18e-54 189
MS.gene64720.t1 MTR_0045s0060 30.025 403 254 11 11 409 1 379 2.62e-54 186
MS.gene64720.t1 MTR_3g112120 29.274 427 275 9 4 422 74 481 2.67e-53 185
MS.gene64720.t1 MTR_0045s0060 29.639 415 261 12 1 408 70 460 2.82e-53 185
MS.gene64720.t1 MTR_8g100135 27.315 432 293 7 1 427 64 479 5.30e-51 179
MS.gene64720.t1 MTR_0045s0070 28.916 415 262 12 1 408 72 460 7.32e-51 178
MS.gene64720.t1 MTR_8g072260 32.682 358 209 8 8 359 69 400 1.03e-50 177
MS.gene64720.t1 MTR_5g091760 26.914 431 280 13 4 424 71 476 1.18e-50 178
MS.gene64720.t1 MTR_3g467140 29.138 429 285 7 1 424 62 476 3.30e-50 177
MS.gene64720.t1 MTR_0045s0070 29.104 402 254 11 1 397 72 447 1.53e-49 174
MS.gene64720.t1 MTR_5g014250 27.804 428 287 8 6 426 79 491 9.11e-48 171
MS.gene64720.t1 MTR_7g016040 30.312 320 205 4 1 320 57 358 2.47e-46 164
MS.gene64720.t1 MTR_8g076940 28.536 403 262 8 4 402 79 459 2.05e-45 164
MS.gene64720.t1 MTR_4g005230 28.535 396 251 10 10 397 83 454 4.93e-45 163
MS.gene64720.t1 MTR_8g012970 28.354 395 265 8 4 397 79 456 3.90e-44 160
MS.gene64720.t1 MTR_5g025610 29.462 353 223 6 8 357 67 396 1.61e-43 157
MS.gene64720.t1 MTR_5g014240 28.967 397 262 9 6 397 78 459 8.30e-40 149
MS.gene64720.t1 MTR_0045s0080 27.933 358 228 7 1 354 70 401 9.07e-39 144
MS.gene64720.t1 MTR_1g032950 27.665 394 247 7 10 397 83 444 2.17e-38 145
MS.gene64720.t1 MTR_3g467140 29.755 326 211 6 103 424 32 343 2.19e-37 139
MS.gene64720.t1 MTR_8g076940 27.809 356 234 7 4 355 79 415 8.70e-34 131
MS.gene64720.t1 MTR_8g089190 23.210 405 270 10 11 399 37 416 2.37e-32 127
MS.gene64720.t1 MTR_8g100135 23.423 333 238 5 1 330 64 382 4.15e-26 109
MS.gene64720.t1 MTR_5g007460 30.417 240 149 6 168 404 223 447 4.38e-24 104
MS.gene64720.t1 MTR_8g076940 26.235 324 216 7 4 323 79 383 4.33e-23 100
MS.gene64720.t1 MTR_8g076940 26.480 321 213 7 4 320 79 380 4.59e-23 100
MS.gene64720.t1 MTR_5g021390 24.337 415 281 15 8 399 75 479 1.04e-22 100
MS.gene64720.t1 MTR_5g007550 30.165 242 145 7 168 404 246 468 1.24e-22 100
MS.gene64720.t1 MTR_5g007450 30.000 240 144 7 168 402 246 466 3.82e-22 99.0
MS.gene64720.t1 MTR_4g095050 26.950 282 178 9 130 399 198 463 1.65e-21 97.1
MS.gene64720.t1 MTR_1g103670 29.644 253 164 6 154 402 224 466 8.34e-21 94.7
MS.gene64720.t1 MTR_2g073480 27.491 291 184 8 139 425 135 402 1.77e-20 93.2
MS.gene64720.t1 MTR_2g073440 27.491 291 184 8 139 425 202 469 3.68e-20 92.8
MS.gene64720.t1 MTR_1g031700 26.736 288 179 8 154 425 224 495 3.72e-19 90.1
MS.gene64720.t1 MTR_0171s0010 26.022 269 182 5 164 425 247 505 5.34e-19 89.4
MS.gene64720.t1 MTR_2g073420 27.273 242 158 5 167 405 254 480 6.39e-19 89.4
MS.gene64720.t1 MTR_8g046240 28.826 281 163 10 161 425 245 504 1.22e-18 88.6
MS.gene64720.t1 MTR_4g071710 22.727 418 291 11 8 399 68 479 1.29e-18 88.2
MS.gene64720.t1 MTR_1g037370 28.431 204 133 4 199 399 267 460 5.21e-18 86.3
MS.gene64720.t1 MTR_1g103680 28.070 285 170 9 155 425 233 496 5.63e-18 86.3
MS.gene64720.t1 MTR_7g075580 27.731 238 154 7 167 400 246 469 6.69e-18 86.3
MS.gene64720.t1 MTR_1g055325 26.667 270 171 8 162 425 259 507 1.53e-17 85.1
MS.gene64720.t1 MTR_4g026200 26.415 265 172 7 167 420 237 489 3.04e-17 84.0
MS.gene64720.t1 MTR_5g056720 25.843 267 163 8 168 427 187 425 4.27e-17 83.2
MS.gene64720.t1 MTR_0171s0020 26.778 239 158 7 167 399 247 474 4.82e-17 83.6
MS.gene64720.t1 MTR_5g072980 27.907 215 141 5 199 406 272 479 5.93e-17 83.2
MS.gene64720.t1 MTR_5g072930 27.907 215 141 5 199 406 272 479 5.93e-17 83.2
MS.gene64720.t1 MTR_4g078110 33.333 177 107 5 231 402 276 446 8.59e-17 82.8
MS.gene64720.t1 MTR_4g062500 27.542 236 154 5 171 399 253 478 8.86e-17 82.8
MS.gene64720.t1 MTR_5g073020 25.830 271 188 6 134 399 206 468 1.15e-16 82.4
MS.gene64720.t1 MTR_1g022040 24.814 403 278 12 7 399 87 474 1.75e-16 81.6
MS.gene64720.t1 MTR_7g103450 27.368 285 184 8 154 427 240 512 1.83e-16 81.6
MS.gene64720.t1 MTR_0181s0030 26.042 288 187 8 148 425 226 497 2.53e-16 81.3
MS.gene64720.t1 MTR_1g492820 22.877 424 286 12 5 401 76 485 2.90e-16 81.3
MS.gene64720.t1 MTR_7g075600 23.810 462 300 17 1 427 58 502 3.01e-16 80.9
MS.gene64720.t1 MTR_1g091023 28.740 254 151 8 157 404 237 466 3.44e-16 80.9
MS.gene64720.t1 MTR_7g075540 25.188 266 171 7 169 423 248 496 4.77e-16 80.5
MS.gene64720.t1 MTR_4g026030 25.468 267 172 8 167 420 85 337 5.73e-16 79.3
MS.gene64720.t1 MTR_8g046210 27.208 283 165 9 161 425 245 504 5.85e-16 80.1
MS.gene64720.t1 MTR_8g098565 25.926 351 226 11 98 424 165 505 6.25e-16 80.1
MS.gene64720.t1 MTR_8g020940 24.615 325 217 9 92 399 157 470 7.51e-16 79.7
MS.gene64720.t1 MTR_1g091003 27.626 257 157 8 176 426 251 484 9.59e-16 79.3
MS.gene64720.t1 MTR_5g045250 24.107 448 267 19 19 425 102 517 1.29e-15 79.3
MS.gene64720.t1 MTR_7g028020 27.165 254 162 7 168 407 234 478 1.33e-15 79.0
MS.gene64720.t1 MTR_2g010300 28.507 221 123 7 218 424 289 488 1.42e-15 79.0
MS.gene64720.t1 MTR_1g091010 28.346 254 152 8 157 404 236 465 1.52e-15 79.0
MS.gene64720.t1 MTR_2g010250 28.205 273 176 8 167 424 237 504 2.04e-15 78.6
MS.gene64720.t1 MTR_7g027960 27.165 254 162 7 168 407 234 478 2.39e-15 78.2
MS.gene64720.t1 MTR_7g012330 26.199 271 181 7 135 399 208 465 2.41e-15 78.2
MS.gene64720.t1 MTR_4g102280 22.697 445 302 15 8 424 75 505 2.99e-15 78.2
MS.gene64720.t1 MTR_8g089190 20.896 335 225 9 11 329 37 347 3.16e-15 77.0
MS.gene64720.t1 MTR_7g075610 27.404 208 137 6 197 399 271 469 4.99e-15 77.4
MS.gene64720.t1 MTR_1g097240 26.119 268 178 6 168 426 239 495 5.33e-15 77.0
MS.gene64720.t1 MTR_8g468780 25.097 259 173 7 148 399 160 404 5.61e-15 77.0
MS.gene64720.t1 MTR_1g107295 25.101 247 169 5 161 399 242 480 7.66e-15 76.6
MS.gene64720.t1 MTR_2g010290 28.692 237 139 7 178 399 280 501 8.53e-15 76.6
MS.gene64720.t1 MTR_1g032980 25.182 274 185 6 6 273 50 309 9.37e-15 75.9
MS.gene64720.t1 MTR_0451s0010 27.711 249 156 9 161 399 54 288 9.93e-15 75.1
MS.gene64720.t1 MTR_8g469300 23.616 271 186 6 164 425 244 502 1.04e-14 76.3
MS.gene64720.t1 MTR_4g102310 25.237 317 182 12 117 424 229 499 1.17e-14 76.3
MS.gene64720.t1 MTR_2g010330 27.347 245 155 7 195 424 270 506 1.21e-14 76.3
MS.gene64720.t1 MTR_2g010380 26.990 289 185 8 154 424 228 508 1.24e-14 76.3
MS.gene64720.t1 MTR_3g076560 26.891 238 155 6 200 426 286 515 1.27e-14 76.3
MS.gene64720.t1 MTR_4g035330 30.811 185 120 4 224 407 278 455 1.59e-14 75.9
MS.gene64720.t1 MTR_1g107300 29.091 165 108 3 239 399 9 168 2.42e-14 72.4
MS.gene64720.t1 MTR_3g020780 26.667 240 158 5 176 404 250 482 2.42e-14 75.1
MS.gene64720.t1 MTR_7g056103 24.280 243 164 4 167 400 244 475 3.23e-14 74.7
MS.gene64720.t1 MTR_3g057910 21.981 414 288 12 8 399 69 469 3.55e-14 74.7
MS.gene64720.t1 MTR_5g018980 26.778 239 155 7 164 393 243 470 4.63e-14 74.3
MS.gene64720.t1 MTR_1g015860 27.386 241 154 7 175 397 258 495 5.48e-14 74.3
MS.gene64720.t1 MTR_4g104660 24.904 261 175 9 176 426 264 513 8.20e-14 73.6
MS.gene64720.t1 MTR_3g104560 25.185 270 154 6 153 404 136 375 1.27e-13 72.4
MS.gene64720.t1 MTR_5g094560 23.904 251 178 6 154 399 224 466 1.41e-13 72.8
MS.gene64720.t1 MTR_4g062510 27.419 186 125 3 220 399 301 482 1.42e-13 72.8
MS.gene64720.t1 MTR_8g020950 22.599 354 246 8 92 424 159 505 1.50e-13 72.8
MS.gene64720.t1 MTR_7g075390 25.210 238 160 7 167 399 246 470 1.73e-13 72.4
MS.gene64720.t1 MTR_4g025980 19.715 421 303 9 1 399 55 462 1.93e-13 72.4
MS.gene64720.t1 MTR_1g116890 25.279 269 178 7 167 425 250 505 1.97e-13 72.4
MS.gene64720.t1 MTR_1g097220 23.922 255 174 6 159 404 259 502 2.11e-13 72.4
MS.gene64720.t1 MTR_8g076290 24.335 263 175 6 149 399 221 471 2.18e-13 72.4
MS.gene64720.t1 MTR_3g104560 25.475 263 148 6 153 397 271 503 2.19e-13 72.4
MS.gene64720.t1 MTR_3g436540 24.180 244 171 6 163 399 239 475 2.22e-13 72.4
MS.gene64720.t1 MTR_2g010320 27.941 204 137 5 202 399 273 472 3.14e-13 71.6
MS.gene64720.t1 MTR_4g088160 26.230 183 122 4 224 397 292 470 3.25e-13 71.6
MS.gene64720.t1 MTR_2g437880 25.692 253 169 8 177 422 250 490 3.36e-13 71.6
MS.gene64720.t1 MTR_4g018800 30.114 176 110 5 225 391 316 487 3.46e-13 71.6
MS.gene64720.t1 MTR_4g088170 24.583 240 157 8 172 397 243 472 3.78e-13 71.6
MS.gene64720.t1 MTR_7g092620 27.604 192 123 4 216 399 289 472 4.04e-13 71.2
MS.gene64720.t1 MTR_8g080520 25.874 286 182 8 125 400 231 496 4.26e-13 71.2
MS.gene64720.t1 MTR_2g019640 23.488 430 281 15 12 412 77 487 5.92e-13 70.9
MS.gene64720.t1 MTR_1g023730 24.545 220 152 5 185 399 267 477 6.07e-13 70.9
MS.gene64720.t1 MTR_5g023680 24.779 226 159 6 178 399 220 438 8.77e-13 70.1
MS.gene64720.t1 MTR_6g042610 27.982 218 136 8 187 391 272 481 9.33e-13 70.5
MS.gene64720.t1 MTR_5g014230 46.667 60 30 1 338 397 1 58 9.44e-13 64.7
MS.gene64720.t1 MTR_3g057860 24.699 332 224 10 82 399 149 468 1.08e-12 70.1
MS.gene64720.t1 MTR_4g088195 23.529 238 160 8 172 397 243 470 1.08e-12 70.1
MS.gene64720.t1 MTR_1g090987 34.400 125 78 3 283 404 31 154 1.23e-12 66.2
MS.gene64720.t1 MTR_5g095260 23.284 408 284 12 8 399 73 467 1.51e-12 69.7
MS.gene64720.t1 MTR_8g008530 22.113 407 283 14 3 390 90 481 2.43e-12 68.9
MS.gene64720.t1 MTR_0171s0030 26.027 219 144 5 169 382 164 369 2.63e-12 68.6
MS.gene64720.t1 MTR_3g057900 23.487 413 278 14 8 399 68 463 3.40e-12 68.6
MS.gene64720.t1 MTR_4g026050 24.444 270 181 8 167 420 227 489 4.16e-12 68.2
MS.gene64720.t1 MTR_5g095290 23.607 305 215 7 102 399 173 466 4.43e-12 68.2
MS.gene64720.t1 MTR_7g012860 24.542 273 187 8 134 399 206 466 5.24e-12 67.8
MS.gene64720.t1 MTR_0287s0060 24.542 273 187 8 134 399 206 466 5.24e-12 67.8
MS.gene64720.t1 MTR_6g042540 28.652 178 111 6 225 391 308 480 6.83e-12 67.8
MS.gene64720.t1 MTR_2g065360 21.717 396 265 13 20 397 68 436 6.87e-12 67.4
MS.gene64720.t1 MTR_3g057800 25.103 243 158 6 167 399 237 465 7.95e-12 67.4
MS.gene64720.t1 MTR_3g057980 24.812 266 176 8 144 399 211 462 9.03e-12 67.0
MS.gene64720.t1 MTR_0059s0170 24.370 238 168 6 167 399 238 468 1.32e-11 66.6
MS.gene64720.t1 MTR_1g023720 25.229 218 153 4 185 399 267 477 1.63e-11 66.2
MS.gene64720.t1 MTR_1g031710 27.397 219 130 7 194 402 75 274 3.58e-11 64.3
MS.gene64720.t1 MTR_6g008640 26.337 243 154 9 161 391 256 485 3.63e-11 65.5
MS.gene64720.t1 MTR_5g094540 23.864 264 186 7 142 399 212 466 3.83e-11 65.1
MS.gene64720.t1 MTR_4g088425 24.481 241 159 8 163 391 237 466 4.06e-11 65.1
MS.gene64720.t1 MTR_7g079440 19.660 412 300 10 8 399 218 618 4.16e-11 65.5
MS.gene64720.t1 MTR_8g091680 25.571 219 153 4 184 399 206 417 4.48e-11 64.7
MS.gene64720.t1 MTR_1g023700 21.933 269 193 6 167 425 250 511 4.51e-11 65.1
MS.gene64720.t1 MTR_5g018500 26.012 173 112 6 244 407 3 168 5.35e-11 62.0
MS.gene64720.t1 MTR_4g025940 28.926 121 79 3 284 399 22 140 5.66e-11 61.6
MS.gene64720.t1 MTR_6g008630 27.619 210 136 6 226 424 227 431 8.11e-11 63.9
MS.gene64720.t1 MTR_6g008620 26.786 224 141 8 178 391 277 487 8.21e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64720.t1 AT4G36380 64.871 427 136 4 1 425 98 512 0.0 571
MS.gene64720.t1 AT3G13730 51.174 426 193 5 1 425 80 491 2.61e-153 443
MS.gene64720.t1 AT3G13730 50.503 398 182 5 1 397 80 463 8.52e-141 410
MS.gene64720.t1 AT4G36380 62.928 321 106 3 1 320 98 406 1.05e-138 404
MS.gene64720.t1 AT5G05690 40.984 427 228 7 1 423 60 466 7.34e-110 332
MS.gene64720.t1 AT3G50660 35.955 445 265 6 1 425 68 512 1.14e-91 286
MS.gene64720.t1 AT5G05690 40.599 367 194 7 61 423 1 347 1.75e-90 278
MS.gene64720.t1 AT5G05690 38.611 360 199 5 1 358 60 399 1.38e-82 259
MS.gene64720.t1 AT4G19230 35.529 425 241 10 1 420 61 457 1.39e-79 254
MS.gene64720.t1 AT1G73340 30.303 429 269 7 1 422 72 477 5.42e-76 245
MS.gene64720.t1 AT5G45340 32.936 419 252 7 8 423 68 460 1.24e-74 241
MS.gene64720.t1 AT4G19230 35.075 402 230 9 1 399 61 434 1.38e-74 241
MS.gene64720.t1 AT3G50660 35.246 366 228 4 1 357 68 433 1.19e-72 235
MS.gene64720.t1 AT5G38970 32.401 429 263 10 1 424 58 464 3.75e-72 234
MS.gene64720.t1 AT5G14400 33.256 430 242 10 1 424 25 415 7.17e-72 232
MS.gene64720.t1 AT5G45340 32.995 394 237 6 8 400 68 435 2.42e-71 231
MS.gene64720.t1 AT1G12740 31.250 400 258 4 1 399 60 443 5.00e-71 231
MS.gene64720.t1 AT1G12740 31.552 393 252 4 8 399 73 449 9.67e-71 231
MS.gene64720.t1 AT3G19270 33.333 399 245 5 8 405 66 444 5.50e-69 226
MS.gene64720.t1 AT3G19270 33.503 394 241 5 8 400 66 439 1.47e-68 224
MS.gene64720.t1 AT1G12740 30.788 406 258 5 1 399 60 449 1.97e-68 225
MS.gene64720.t1 AT2G29090 32.243 428 262 9 4 425 77 482 5.87e-68 224
MS.gene64720.t1 AT2G29090 32.243 428 262 9 4 425 77 482 5.87e-68 224
MS.gene64720.t1 AT5G14400 33.580 405 225 9 1 400 25 390 1.08e-67 220
MS.gene64720.t1 AT5G38970 32.178 404 247 10 26 424 2 383 5.43e-66 216
MS.gene64720.t1 AT5G38970 32.178 404 247 10 26 424 2 383 5.43e-66 216
MS.gene64720.t1 AT3G30180 30.374 428 273 8 1 424 58 464 4.64e-65 216
MS.gene64720.t1 AT1G55940 32.143 420 264 9 9 422 83 487 1.55e-64 215
MS.gene64720.t1 AT1G55940 32.152 395 250 7 9 398 83 464 4.07e-62 208
MS.gene64720.t1 AT2G29090 32.108 408 247 10 25 425 3 387 2.20e-61 204
MS.gene64720.t1 AT5G14400 32.412 398 224 10 33 424 3 361 1.54e-60 201
MS.gene64720.t1 AT3G44970 31.050 438 258 8 1 422 64 473 2.75e-60 204
MS.gene64720.t1 AT1G19630 30.189 424 272 9 4 422 68 472 1.06e-58 199
MS.gene64720.t1 AT1G19630 29.825 399 259 7 4 400 68 447 9.44e-57 193
MS.gene64720.t1 AT5G48000 30.233 430 272 9 1 422 64 473 1.57e-56 194
MS.gene64720.t1 AT5G48000 30.233 430 272 9 1 422 64 473 1.57e-56 194
MS.gene64720.t1 AT5G48000 30.233 430 272 9 1 422 64 473 1.57e-56 194
MS.gene64720.t1 AT5G48000 30.233 430 272 9 1 422 64 473 1.57e-56 194
MS.gene64720.t1 AT5G48000 30.233 430 272 9 1 422 64 473 1.57e-56 194
MS.gene64720.t1 AT5G48000 30.233 430 272 9 1 422 64 473 1.57e-56 194
MS.gene64720.t1 AT5G48000 29.861 432 271 7 1 422 105 514 5.05e-56 193
MS.gene64720.t1 AT4G15300 30.127 395 251 9 8 399 61 433 2.73e-54 187
MS.gene64720.t1 AT4G15300 30.127 395 251 9 8 399 71 443 4.07e-54 187
MS.gene64720.t1 AT1G05160 29.684 411 271 7 8 413 81 478 7.34e-54 187
MS.gene64720.t1 AT1G05160 29.684 411 271 7 8 413 81 478 7.34e-54 187
MS.gene64720.t1 AT1G78490 29.371 429 277 10 1 422 64 473 4.03e-53 184
MS.gene64720.t1 AT5G38970 30.168 358 225 8 1 354 58 394 1.00e-51 179
MS.gene64720.t1 AT2G32440 29.517 393 259 7 8 397 80 457 3.96e-50 177
MS.gene64720.t1 AT2G32440 29.517 393 259 7 8 397 80 457 3.96e-50 177
MS.gene64720.t1 AT4G15300 28.954 411 253 10 6 399 67 455 6.39e-50 176
MS.gene64720.t1 AT5G14400 32.923 325 194 7 1 320 25 330 3.37e-48 167
MS.gene64720.t1 AT5G36110 27.660 423 273 8 11 424 77 475 1.36e-47 170
MS.gene64720.t1 AT4G15393 28.643 398 252 12 8 399 71 442 1.54e-46 167
MS.gene64720.t1 AT4G15396 28.535 396 257 10 8 399 71 444 1.65e-46 167
MS.gene64720.t1 AT3G30290 29.829 409 254 13 12 410 5 390 1.69e-46 165
MS.gene64720.t1 AT1G65670 27.806 392 249 9 8 393 71 434 8.63e-46 165
MS.gene64720.t1 AT4G15396 28.462 390 254 9 8 393 71 439 1.20e-45 164
MS.gene64720.t1 AT2G42850 27.465 426 275 13 8 424 82 482 1.24e-45 164
MS.gene64720.t1 AT1G19630 28.814 354 234 6 4 355 68 405 1.66e-45 163
MS.gene64720.t1 AT1G12740 29.283 321 210 4 1 320 60 364 7.46e-45 160
MS.gene64720.t1 AT4G15396 27.525 396 240 11 8 399 71 423 1.10e-38 145
MS.gene64720.t1 AT4G15310 25.373 402 276 8 1 399 66 446 7.66e-37 140
MS.gene64720.t1 AT1G78490 27.147 361 238 9 1 355 64 405 1.52e-36 138
MS.gene64720.t1 AT4G15393 26.989 352 229 9 8 355 71 398 5.63e-35 134
MS.gene64720.t1 AT4G15396 27.195 353 233 8 8 357 71 402 1.19e-34 133
MS.gene64720.t1 AT2G42850 26.543 324 219 8 8 329 82 388 4.87e-27 112
MS.gene64720.t1 AT5G36130 35.507 138 84 2 290 424 3 138 1.36e-24 99.0
MS.gene64720.t1 AT5G36110 24.923 325 216 6 11 329 77 379 2.72e-24 103
MS.gene64720.t1 AT1G33730 29.046 241 159 4 162 399 106 337 4.09e-24 103
MS.gene64720.t1 AT1G33730 29.046 241 159 4 162 399 106 337 4.09e-24 103
MS.gene64720.t1 AT4G15393 24.716 352 204 10 8 355 71 365 1.10e-23 102
MS.gene64720.t1 AT2G29090 26.866 268 173 7 4 267 77 325 1.23e-22 98.6
MS.gene64720.t1 AT2G45580 25.306 245 169 6 158 399 87 320 6.49e-20 90.9
MS.gene64720.t1 AT4G37430 28.936 235 152 6 167 399 240 461 1.30e-19 91.3
MS.gene64720.t1 AT2G45560 27.119 236 156 5 167 399 251 473 1.60e-19 91.3
MS.gene64720.t1 AT2G45580 25.306 245 169 6 158 399 241 474 1.62e-19 91.3
MS.gene64720.t1 AT2G45550 22.276 413 294 8 7 399 68 473 2.82e-19 90.5
MS.gene64720.t1 AT4G37410 26.236 263 172 8 167 422 237 484 3.99e-19 89.7
MS.gene64720.t1 AT1G33720 27.513 189 130 3 214 399 157 341 7.67e-19 88.2
MS.gene64720.t1 AT1G33720 27.513 189 130 3 214 399 157 341 7.67e-19 88.2
MS.gene64720.t1 AT1G33720 27.513 189 130 3 214 399 157 341 7.67e-19 88.2
MS.gene64720.t1 AT2G45570 28.340 247 154 9 161 399 243 474 1.11e-18 88.6
MS.gene64720.t1 AT4G37400 24.716 352 234 10 85 420 146 482 1.48e-18 88.2
MS.gene64720.t1 AT1G33720 25.207 242 166 5 161 399 244 473 2.07e-18 87.8
MS.gene64720.t1 AT4G37370 26.172 256 170 7 168 420 240 479 8.17e-18 85.9
MS.gene64720.t1 AT1G33720 29.240 171 114 3 232 399 200 366 2.04e-17 84.0
MS.gene64720.t1 AT4G37340 24.924 329 217 10 84 399 146 457 2.61e-17 84.3
MS.gene64720.t1 AT1G50520 25.284 352 209 13 105 426 182 509 6.88e-17 83.2
MS.gene64720.t1 AT4G36220 28.455 246 163 4 163 399 240 481 7.64e-17 83.2
MS.gene64720.t1 AT5G67310 23.058 412 284 14 10 404 76 471 9.52e-17 82.8
MS.gene64720.t1 AT4G15360 24.922 321 210 8 103 406 175 481 1.28e-16 82.4
MS.gene64720.t1 AT3G28740 29.730 259 149 10 171 421 252 485 1.97e-16 81.6
MS.gene64720.t1 AT5G04330 25.000 272 187 6 167 426 237 503 3.32e-16 80.9
MS.gene64720.t1 AT3G26210 24.900 249 180 4 154 399 222 466 3.37e-16 80.9
MS.gene64720.t1 AT3G44970 24.074 324 203 7 1 309 64 359 4.24e-16 79.7
MS.gene64720.t1 AT4G37360 24.906 265 170 8 165 420 237 481 6.83e-16 80.1
MS.gene64720.t1 AT3G61040 27.805 205 135 5 199 399 267 462 7.94e-16 79.7
MS.gene64720.t1 AT5G25140 27.962 211 142 5 193 399 255 459 1.08e-15 79.3
MS.gene64720.t1 AT5G44620 23.897 272 180 9 164 425 255 509 1.23e-15 79.3
MS.gene64720.t1 AT5G25120 26.582 237 157 7 167 399 236 459 2.54e-15 78.2
MS.gene64720.t1 AT4G13770 27.320 194 135 4 210 399 274 465 2.98e-15 78.2
MS.gene64720.t1 AT4G31950 26.616 263 166 11 146 391 218 470 3.75e-15 77.8
MS.gene64720.t1 AT1G66540 25.103 243 150 7 166 399 66 285 5.39e-15 76.3
MS.gene64720.t1 AT3G26180 24.681 235 164 6 200 425 135 365 6.62e-15 76.3
MS.gene64720.t1 AT1G66540 25.103 243 150 7 166 399 125 344 7.41e-15 76.3
MS.gene64720.t1 AT1G13110 24.542 273 192 6 136 401 206 471 7.62e-15 76.6
MS.gene64720.t1 AT1G64950 25.957 235 160 6 169 399 252 476 8.52e-15 76.6
MS.gene64720.t1 AT2G26170 27.344 256 152 7 153 397 173 405 9.17e-15 76.3
MS.gene64720.t1 AT2G26170 27.309 249 161 7 153 397 256 488 1.22e-14 76.3
MS.gene64720.t1 AT4G37310 23.140 242 175 5 160 399 237 469 1.47e-14 75.9
MS.gene64720.t1 AT3G26180 24.681 235 164 6 200 425 269 499 1.96e-14 75.5
MS.gene64720.t1 AT4G37320 25.287 261 174 7 167 422 239 483 2.76e-14 75.1
MS.gene64720.t1 AT5G09970 23.981 417 272 16 17 405 111 510 3.00e-14 75.1
MS.gene64720.t1 AT5G25130 30.151 199 124 5 237 425 298 491 3.52e-14 74.7
MS.gene64720.t1 AT3G26230 25.751 233 163 6 200 425 266 495 4.42e-14 74.3
MS.gene64720.t1 AT5G57220 24.615 260 176 8 167 422 235 478 4.72e-14 74.3
MS.gene64720.t1 AT2G12190 26.582 237 158 7 169 399 252 478 6.29e-14 73.9
MS.gene64720.t1 AT2G42250 28.333 180 115 3 230 399 304 479 7.03e-14 73.9
MS.gene64720.t1 AT3G26170 24.255 235 165 6 200 425 269 499 7.24e-14 73.9
MS.gene64720.t1 AT3G32047 23.569 297 186 8 116 406 220 481 7.84e-14 73.6
MS.gene64720.t1 AT3G20940 22.396 384 271 9 63 426 132 508 9.52e-14 73.6
MS.gene64720.t1 AT4G12330 25.000 268 178 7 164 425 258 508 1.27e-13 73.2
MS.gene64720.t1 AT3G20950 22.554 368 232 12 63 399 136 481 3.25e-13 71.6
MS.gene64720.t1 AT1G64940 24.681 235 163 6 169 399 253 477 3.48e-13 71.6
MS.gene64720.t1 AT2G23220 25.000 296 177 8 109 399 217 472 4.05e-13 71.6
MS.gene64720.t1 AT5G47990 23.292 322 213 12 104 406 178 484 6.16e-13 70.9
MS.gene64720.t1 AT1G13710 25.191 262 170 9 172 425 267 510 6.57e-13 70.9
MS.gene64720.t1 AT5G35715 24.793 242 160 7 164 399 177 402 1.09e-12 70.1
MS.gene64720.t1 AT1G13100 24.891 229 159 5 184 405 248 470 1.15e-12 70.1
MS.gene64720.t1 AT4G12300 23.571 280 195 8 153 425 239 506 1.29e-12 70.1
MS.gene64720.t1 AT5G36140 21.933 269 183 5 2 264 64 311 1.34e-12 68.9
MS.gene64720.t1 AT1G13080 22.727 242 169 5 196 425 146 381 1.43e-12 69.3
MS.gene64720.t1 AT5G10610 30.729 192 125 4 237 424 300 487 1.46e-12 69.7
MS.gene64720.t1 AT1G64930 25.862 174 120 4 232 399 307 477 2.20e-12 69.3
MS.gene64720.t1 AT5G25180 27.962 211 142 5 193 399 255 459 2.38e-12 68.9
MS.gene64720.t1 AT5G10600 28.169 213 135 6 224 427 298 501 2.63e-12 68.9
MS.gene64720.t1 AT1G13080 22.727 242 169 5 196 425 264 499 2.77e-12 68.9
MS.gene64720.t1 AT4G37330 23.636 330 213 10 83 399 151 454 7.69e-12 67.4
MS.gene64720.t1 AT2G46960 21.973 446 312 15 2 425 86 517 1.60e-11 66.6
MS.gene64720.t1 AT2G23190 26.582 237 152 7 167 399 283 501 1.60e-11 66.6
MS.gene64720.t1 AT3G26125 22.381 420 280 15 45 424 118 531 2.03e-11 66.2
MS.gene64720.t1 AT3G20960 23.358 274 183 7 166 425 142 402 2.27e-11 65.9
MS.gene64720.t1 AT3G20960 23.358 274 183 7 166 425 245 505 2.43e-11 65.9
MS.gene64720.t1 AT3G26220 26.383 235 159 7 200 425 269 498 3.12e-11 65.5
MS.gene64720.t1 AT4G15330 24.399 291 177 9 132 406 187 450 4.40e-11 65.1
MS.gene64720.t1 AT4G15330 24.742 291 176 9 132 406 215 478 5.01e-11 65.1
MS.gene64720.t1 AT3G20140 22.642 265 182 7 141 399 226 473 6.56e-11 64.7
MS.gene64720.t1 AT3G56630 23.295 352 227 12 99 423 161 496 7.35e-11 64.3

Find 115 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGATTACATTTCCTATTT+TGG 0.104510 5.2:-12403290 MS.gene64720:intron
ATTAATTCTCTAATTGATTT+TGG 0.133983 5.2:+12403617 None:intergenic
GTTCTATGCTTGCAGAAAAT+TGG 0.194013 5.2:-12400761 MS.gene64720:intron
TTTAGTTTGTGGGACCTTTA+AGG 0.198069 5.2:+12403144 None:intergenic
CTCCATGGATCAAACTTATA+AGG 0.221346 5.2:+12400870 None:intergenic
AAAATCAATTAGAGAATTAA+TGG 0.246586 5.2:-12403615 MS.gene64720:CDS
AGAACCACCTTGTTCACTTC+TGG 0.255131 5.2:+12403674 None:intergenic
TGTGTTTAAGACAAACATTT+TGG 0.256802 5.2:-12403723 MS.gene64720:CDS
GCCATAACACCCCAATCTTT+TGG 0.264678 5.2:+12400936 None:intergenic
GTTATGGGTTGCACTCTAAT+TGG 0.269288 5.2:+12400475 None:intergenic
AACAATTGCTTTACCCCGTT+TGG 0.287823 5.2:-12400725 MS.gene64720:CDS
GTCAAAGATGTAGAAATTAA+AGG 0.294322 5.2:-12401069 MS.gene64720:intron
AACACTATACAAATCCTTAA+AGG 0.295030 5.2:-12403158 MS.gene64720:intron
CGCTGGTCCTGGTGAAGATT+TGG 0.299731 5.2:-12403251 MS.gene64720:CDS
TCATAAACTCGATGATGTTT+TGG 0.311295 5.2:+12402395 None:intergenic
TCCAAAAGATTGGGGTGTTA+TGG 0.312326 5.2:-12400937 MS.gene64720:CDS
AGAATGGCAAATATAGTTAA+TGG 0.320179 5.2:-12401108 MS.gene64720:CDS
CTAATCCAATCAAGCGGTTA+TGG 0.320560 5.2:+12400459 None:intergenic
ATCAAAACTTTAACCAAAAT+AGG 0.329280 5.2:+12403277 None:intergenic
CAAATATAGTTAATGGCATT+TGG 0.330060 5.2:-12401101 MS.gene64720:CDS
GTCCTGGGTTAGAACTTTCC+AGG 0.336224 5.2:-12400685 MS.gene64720:CDS
TGCTTACCCATCAAGTTTCC+AGG 0.342322 5.2:-12403184 MS.gene64720:CDS
GGTACTTAATTCCAAAAGAT+TGG 0.356113 5.2:-12400947 MS.gene64720:CDS
AAGTGAACTTACCATAAGTT+TGG 0.362544 5.2:+12402297 None:intergenic
GGCTAATCATTTCCACCATC+AGG 0.366977 5.2:+12402416 None:intergenic
GTACTTAATTCCAAAAGATT+GGG 0.369779 5.2:-12400946 MS.gene64720:CDS
TGTGCATGGTCCCGTTCAAT+TGG 0.379552 5.2:+12403576 None:intergenic
TCCATGGATCAAACTTATAA+GGG 0.382563 5.2:+12400871 None:intergenic
GTCTATGTCCACTCCCAAAC+GGG 0.383770 5.2:+12400711 None:intergenic
TCTTGCTCTATCCAAACTTA+TGG 0.389079 5.2:-12402308 MS.gene64720:intron
ACAATTGCTTTACCCCGTTT+GGG 0.392525 5.2:-12400724 MS.gene64720:CDS
GTAGGAAGGGTCTCTTCCCC+TGG 0.393850 5.2:+12402370 None:intergenic
GATTTGTATAGTGTTGTTCC+TGG 0.395515 5.2:+12403166 None:intergenic
TTATGGGTTGCACTCTAATT+GGG 0.398425 5.2:+12400476 None:intergenic
GGAGAGAATGAAGCTAATAA+TGG 0.399962 5.2:-12402542 MS.gene64720:CDS
TCAAACAATGCTTAGCATCT+TGG 0.408205 5.2:-12403472 MS.gene64720:CDS
GTGATTTGAGATTTAAATTG+TGG 0.415031 5.2:+12403515 None:intergenic
TCGGTCCATGTATAACCATC+TGG 0.422147 5.2:+12401290 None:intergenic
GAACCACCTTGTTCACTTCT+GGG 0.428388 5.2:+12403675 None:intergenic
GGATGCACTCCTAAGGGATA+AGG 0.428688 5.2:-12402470 MS.gene64720:CDS
CCAAGGTCATGGCCGTAGGA+AGG 0.430704 5.2:+12402356 None:intergenic
TAATCCAATCAAGCGGTTAT+GGG 0.432977 5.2:+12400460 None:intergenic
GAAAATAGAGAGCTCTAGCC+TGG 0.437388 5.2:+12400667 None:intergenic
TGCTTTACCCCGTTTGGGAG+TGG 0.447369 5.2:-12400719 MS.gene64720:CDS
CCTTCCTACGGCCATGACCT+TGG 0.458295 5.2:-12402356 MS.gene64720:CDS
ACCATCTTGTTACTACATAT+AGG 0.461712 5.2:-12400640 MS.gene64720:intron
TGTTGTTCCTGGAAACTTGA+TGG 0.463267 5.2:+12403177 None:intergenic
AAATCAATTAGAGAATTAAT+GGG 0.474603 5.2:-12403614 MS.gene64720:CDS
ACTCTATACTCCAATTGAAC+GGG 0.481498 5.2:-12403586 MS.gene64720:CDS
GGGAATCAGTGAGGAATTTG+AGG 0.481890 5.2:+12402332 None:intergenic
TTCTTCTTCATCTTAACAGT+TGG 0.485685 5.2:+12400502 None:intergenic
ATGTCGTGGATGCACTCCTA+AGG 0.487050 5.2:-12402477 MS.gene64720:CDS
CAAGGTCATGGCCGTAGGAA+GGG 0.504349 5.2:+12402357 None:intergenic
AGTCTATGTCCACTCCCAAA+CGG 0.509207 5.2:+12400710 None:intergenic
ACAACTCACCCTTATCCCTT+AGG 0.509490 5.2:+12402461 None:intergenic
ATCTCTTACCTCTGTTCACA+TGG 0.511037 5.2:-12400913 MS.gene64720:CDS
GAATTTGAGGGCCAAGGTCA+TGG 0.514355 5.2:+12402345 None:intergenic
CATCAGTGAAACTCTTAGAA+TGG 0.514991 5.2:-12401124 MS.gene64720:CDS
GATGCACTCCTAAGGGATAA+GGG 0.516189 5.2:-12402469 MS.gene64720:CDS
ATCATCGAGTTTATGATCCC+AGG 0.518034 5.2:-12402388 MS.gene64720:CDS
ACCCTTATAAGTTTGATCCA+TGG 0.521614 5.2:-12400872 MS.gene64720:CDS
TGATTTGAGATTTAAATTGT+GGG 0.525173 5.2:+12403516 None:intergenic
GGAAAGGATGATGAAGATGG+TGG 0.538073 5.2:-12402578 MS.gene64720:CDS
ATGCAGCTGGGTAGCTGAGA+GGG 0.538109 5.2:-12400542 MS.gene64720:intron
TAAGTTTGATCCATGGAGAT+GGG 0.540584 5.2:-12400865 MS.gene64720:CDS
CACTCTATACTCCAATTGAA+CGG 0.541658 5.2:-12403587 MS.gene64720:CDS
TGAATGCAGTTTCTTGTGCA+TGG 0.547315 5.2:+12403562 None:intergenic
CAGAAGACTAATTTCCCAGA+TGG 0.550227 5.2:-12401305 MS.gene64720:CDS
AGTGGACATAGACTGTGTCC+TGG 0.550707 5.2:-12400701 MS.gene64720:CDS
AGGTGGTTCTACTGAATCAA+AGG 0.553644 5.2:-12403661 MS.gene64720:CDS
GAATTTGAAGTATTCATCAA+AGG 0.554504 5.2:-12403214 MS.gene64720:CDS
ATTTCCCAGATGGTTATACA+TGG 0.556929 5.2:-12401295 MS.gene64720:CDS
ATAAGTTTGATCCATGGAGA+TGG 0.559071 5.2:-12400866 MS.gene64720:CDS
GAAAGGATGATGAAGATGGT+GGG 0.563859 5.2:-12402577 MS.gene64720:CDS
GTGGACATAGACTGTGTCCT+GGG 0.564579 5.2:-12400700 MS.gene64720:CDS
ATATAGTTAATGGCATTTGG+AGG 0.565284 5.2:-12401098 MS.gene64720:CDS
CGGTCCATGTATAACCATCT+GGG 0.565516 5.2:+12401291 None:intergenic
AAAGGATGATGAAGATGGTG+GGG 0.567025 5.2:-12402576 MS.gene64720:CDS
TCATCGAGTTTATGATCCCA+GGG 0.567445 5.2:-12402387 MS.gene64720:CDS
TAGGAAGGGTCTCTTCCCCT+GGG 0.574408 5.2:+12402371 None:intergenic
GATGGTGGGGAGGATAGTTG+AGG 0.577517 5.2:-12402563 MS.gene64720:CDS
GGATGATGAAGATGGTGGGG+AGG 0.579887 5.2:-12402573 MS.gene64720:CDS
ACCTATATGTAGTAACAAGA+TGG 0.581460 5.2:+12400639 None:intergenic
CTCAAGTTCAAACCTGATGG+TGG 0.582484 5.2:-12402428 MS.gene64720:CDS
AAGCTCAAGTTCAAACCTGA+TGG 0.583552 5.2:-12402431 MS.gene64720:CDS
AGGGGAAGAGACCCTTCCTA+CGG 0.586360 5.2:-12402368 MS.gene64720:CDS
GGAATCAGTGAGGAATTTGA+GGG 0.587232 5.2:+12402333 None:intergenic
AGTGAGGAATTTGAGGGCCA+AGG 0.587445 5.2:+12402339 None:intergenic
TAAGGAAAGGATGATGAAGA+TGG 0.588053 5.2:-12402581 MS.gene64720:CDS
ATGTAGTAACAAGATGGTGA+AGG 0.588266 5.2:+12400645 None:intergenic
TAATGCAGAAGATGATGAGA+AGG 0.589946 5.2:-12402515 MS.gene64720:CDS
GTTGTTCCTGGAAACTTGAT+GGG 0.590416 5.2:+12403178 None:intergenic
TGAATTACCTCCCATCTCCA+TGG 0.604615 5.2:+12400855 None:intergenic
GATTTGAGATTTAAATTGTG+GGG 0.605113 5.2:+12403517 None:intergenic
TGTCGTGGATGCACTCCTAA+GGG 0.606095 5.2:-12402476 MS.gene64720:CDS
GCAGAAGATGATGAGAAGGT+TGG 0.607362 5.2:-12402511 MS.gene64720:CDS
AGGGCCAAGGTCATGGCCGT+AGG 0.609633 5.2:+12402352 None:intergenic
AACAAGTCCAAATCTTCACC+AGG 0.611685 5.2:+12403244 None:intergenic
TACTTAATTCCAAAAGATTG+GGG 0.612885 5.2:-12400945 MS.gene64720:CDS
GGGGTAAAGCAATTGTTACT+AGG 0.613415 5.2:+12400731 None:intergenic
ATAAGTTTGGATAGAGCAAG+AGG 0.619829 5.2:+12402310 None:intergenic
AACAGACCCAGAAGTGAACA+AGG 0.624669 5.2:-12403681 MS.gene64720:CDS
TAAGTTTGGATAGAGCAAGA+GGG 0.638529 5.2:+12402311 None:intergenic
AAGTTTGGATAGAGCAAGAG+GGG 0.641935 5.2:+12402312 None:intergenic
AAATGGCAGTGACATGTAGT+CGG 0.644150 5.2:+12401271 None:intergenic
ATATTGTGCAGGCTAAGGAA+AGG 0.644628 5.2:-12402594 MS.gene64720:intron
TGGTGTAGTGAATGATGTCG+TGG 0.651062 5.2:-12402491 MS.gene64720:CDS
GAGCAAGAGGGGAATCAGTG+AGG 0.657704 5.2:+12402323 None:intergenic
AATGCAGCTGGGTAGCTGAG+AGG 0.659354 5.2:-12400543 MS.gene64720:intron
AGCCTGGAAAGTTCTAACCC+AGG 0.669021 5.2:+12400683 None:intergenic
GATGGTCTAATCCAATCAAG+CGG 0.685990 5.2:+12400453 None:intergenic
GTTTGATCCATGGAGATGGG+AGG 0.686608 5.2:-12400862 MS.gene64720:intron
TCTATGTCCACTCCCAAACG+GGG 0.708133 5.2:+12400712 None:intergenic
CATCGAGTTTATGATCCCAG+GGG 0.761884 5.2:-12402386 MS.gene64720:CDS
AGACCCAGAAGTGAACAAGG+TGG 0.808955 5.2:-12403678 MS.gene64720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTATTATAATTTATA+AGG + chr5.2:12400496-12400515 None:intergenic 0.0%
!! ATATCAAAGTTAAAAATTTA+TGG + chr5.2:12401544-12401563 None:intergenic 10.0%
!! ATTATGAACAAAAAAATTAT+AGG + chr5.2:12404933-12404952 None:intergenic 10.0%
!! CAATAATGATAAAAATAATT+AGG + chr5.2:12400527-12400546 None:intergenic 10.0%
!! TATTTATAAAATATAGCTAT+GGG + chr5.2:12401138-12401157 None:intergenic 10.0%
!! TTACATAATCTAATATAATA+AGG - chr5.2:12403660-12403679 MS.gene64720:CDS 10.0%
!! TTATTTATAAAATATAGCTA+TGG + chr5.2:12401139-12401158 None:intergenic 10.0%
!!! AATTATATATATTTAGTTTG+TGG + chr5.2:12402399-12402418 None:intergenic 10.0%
!!! AATTATTTTAGTAGTTTAAA+TGG - chr5.2:12401436-12401455 MS.gene64720:intron 10.0%
!!! ATTATATATATTTAGTTTGT+GGG + chr5.2:12402398-12402417 None:intergenic 10.0%
!!! TCATATATGAAATTTTTATT+TGG + chr5.2:12404154-12404173 None:intergenic 10.0%
!! AAAATCAATTAGAGAATTAA+TGG - chr5.2:12401914-12401933 MS.gene64720:intron 15.0%
!! AAATCAATTAGAGAATTAAT+GGG - chr5.2:12401915-12401934 MS.gene64720:intron 15.0%
!! ATATATAAGAAAGTTAACAT+TGG + chr5.2:12404301-12404320 None:intergenic 15.0%
!! TATCATGTAAAATATCAAAA+TGG + chr5.2:12403501-12403520 None:intergenic 15.0%
!! TCATATAAGAAATGAATATT+TGG + chr5.2:12403434-12403453 None:intergenic 15.0%
!!! ATCTCACTTATTAAATTTTT+TGG - chr5.2:12400845-12400864 MS.gene64720:intron 15.0%
!!! ATTAATTCTCTAATTGATTT+TGG + chr5.2:12401915-12401934 None:intergenic 15.0%
!!! TCTGATTCATTTATTTTATT+AGG - chr5.2:12404178-12404197 MS.gene64720:intron 15.0%
!!! TTAGTCTTTTTTTATTATTC+AGG - chr5.2:12401517-12401536 MS.gene64720:intron 15.0%
!!! TTGAATATATATTGTTTTGT+TGG + chr5.2:12402084-12402103 None:intergenic 15.0%
!!! TTTCTTTTTACTAATTGAAA+GGG + chr5.2:12401741-12401760 None:intergenic 15.0%
!! ATAAAATATAGTTGAGTAGA+TGG - chr5.2:12402526-12402545 MS.gene64720:CDS 20.0%
!! ATAATAAACGTTTATGTAAG+TGG + chr5.2:12403874-12403893 None:intergenic 20.0%
!! ATATAAACATGACTAGATAT+AGG + chr5.2:12404709-12404728 None:intergenic 20.0%
!! ATCAAAACTTTAACCAAAAT+AGG + chr5.2:12402255-12402274 None:intergenic 20.0%
!! ATCTTAGAAAAATAAAAGCA+TGG + chr5.2:12401316-12401335 None:intergenic 20.0%
!! GGGTTAAAATATTAAAATTG+AGG + chr5.2:12401289-12401308 None:intergenic 20.0%
!! TACTGTGTAAATAGTTATTA+TGG + chr5.2:12400756-12400775 None:intergenic 20.0%
!! TATTCAAGATGAAGTAAAAA+AGG - chr5.2:12402097-12402116 MS.gene64720:intron 20.0%
!! TCAAAAGAGAAAAGATAATT+AGG + chr5.2:12402195-12402214 None:intergenic 20.0%
!!! AATTAAGACTAAAGTTTTTG+TGG + chr5.2:12400728-12400747 None:intergenic 20.0%
!!! ACATTTTCATCTTTTTTTTG+TGG - chr5.2:12402436-12402455 MS.gene64720:CDS 20.0%
!!! CAAAATTTTCTGTTATTCAA+AGG + chr5.2:12403814-12403833 None:intergenic 20.0%
!!! CTGTAATCACATTTTTTATA+GGG + chr5.2:12404340-12404359 None:intergenic 20.0%
!!! GAATATTTGGACTTTTAAAA+AGG + chr5.2:12403421-12403440 None:intergenic 20.0%
!!! GATTCATTTATTTTATTAGG+AGG - chr5.2:12404181-12404200 MS.gene64720:intron 20.0%
!!! GTTTCTTTTTACTAATTGAA+AGG + chr5.2:12401742-12401761 None:intergenic 20.0%
!!! TCTTAGAAAAATAAAAGCAT+GGG + chr5.2:12401315-12401334 None:intergenic 20.0%
!!! TGATTTGAGATTTAAATTGT+GGG + chr5.2:12402016-12402035 None:intergenic 20.0%
!!! TTTTAACTGAGAGATTAAAT+CGG - chr5.2:12401582-12401601 MS.gene64720:intron 20.0%
! AACACTATACAAATCCTTAA+AGG - chr5.2:12402371-12402390 MS.gene64720:CDS 25.0%
! AACTAGTCAAAAAACATTCA+AGG - chr5.2:12403343-12403362 MS.gene64720:intron 25.0%
! AAGATTCACATTTCACTATT+TGG + chr5.2:12400700-12400719 None:intergenic 25.0%
! AATAGTGAAATGTGAATCTT+TGG - chr5.2:12400700-12400719 MS.gene64720:CDS 25.0%
! AGAATGGCAAATATAGTTAA+TGG - chr5.2:12404421-12404440 MS.gene64720:intron 25.0%
! ATAAGTAACATGCTAGATTT+GGG - chr5.2:12402732-12402751 MS.gene64720:intron 25.0%
! CAAATATAGTTAATGGCATT+TGG - chr5.2:12404428-12404447 MS.gene64720:intron 25.0%
! CACTAGATTCAAAATGAAAT+TGG + chr5.2:12401085-12401104 None:intergenic 25.0%
! CTTTAATCATATAGATCTCA+TGG + chr5.2:12401415-12401434 None:intergenic 25.0%
! GTACTTAATTCCAAAAGATT+GGG - chr5.2:12404583-12404602 MS.gene64720:intron 25.0%
! GTATATGTAAATGCAGTTAT+GGG - chr5.2:12401781-12401800 MS.gene64720:intron 25.0%
! TACTTAATTCCAAAAGATTG+GGG - chr5.2:12404584-12404603 MS.gene64720:intron 25.0%
! TGTATATGTAAATGCAGTTA+TGG - chr5.2:12401780-12401799 MS.gene64720:intron 25.0%
! TTCACAAGATAAGTTATCTT+TGG - chr5.2:12404494-12404513 MS.gene64720:intron 25.0%
! TTGTTCAATTCGAAAATTTG+AGG + chr5.2:12401486-12401505 None:intergenic 25.0%
! TTTCAATGAAAGATGATTGT+CGG - chr5.2:12400899-12400918 MS.gene64720:CDS 25.0%
!! AATCATTCTTGTGTCATTAA+GGG - chr5.2:12403277-12403296 MS.gene64720:CDS 25.0%
!! CTTAGAAAAATAAAAGCATG+GGG + chr5.2:12401314-12401333 None:intergenic 25.0%
!! CTTATCATAGGTTTCTTTTT+AGG + chr5.2:12402717-12402736 None:intergenic 25.0%
!! GAATTTGAAGTATTCATCAA+AGG - chr5.2:12402315-12402334 MS.gene64720:CDS 25.0%
!! GATTTGAGATTTAAATTGTG+GGG + chr5.2:12402015-12402034 None:intergenic 25.0%
!! GTGATTTGAGATTTAAATTG+TGG + chr5.2:12402017-12402036 None:intergenic 25.0%
!! TAATCATTCTTGTGTCATTA+AGG - chr5.2:12403276-12403295 MS.gene64720:CDS 25.0%
!! TAGTAACTTTTTATCTGCAT+TGG + chr5.2:12401225-12401244 None:intergenic 25.0%
!! TTGTTATTAGATGTGAAAGT+AGG + chr5.2:12402815-12402834 None:intergenic 25.0%
!! TTTCTCTTTTGAACTTTTTG+TGG - chr5.2:12402203-12402222 MS.gene64720:intron 25.0%
!!! AAACTCACATTTTGAGTAAA+TGG + chr5.2:12404278-12404297 None:intergenic 25.0%
!!! ATTAGACCTTACTTTTTGAA+TGG + chr5.2:12403696-12403715 None:intergenic 25.0%
!!! CTTTGAAGTTATTAATCTTG+TGG - chr5.2:12404115-12404134 MS.gene64720:intron 25.0%
!!! GCTGTAATCACATTTTTTAT+AGG + chr5.2:12404341-12404360 None:intergenic 25.0%
!!! GTGTTTAAGACAAACATTTT+GGG - chr5.2:12401807-12401826 MS.gene64720:intron 25.0%
!!! TAATTGATTTTGGATAAGCA+GGG + chr5.2:12401905-12401924 None:intergenic 25.0%
!!! TGTGTTTAAGACAAACATTT+TGG - chr5.2:12401806-12401825 MS.gene64720:intron 25.0%
!!! TTTTTTATCTAGTCCTACTT+AGG - chr5.2:12402764-12402783 MS.gene64720:intron 25.0%
!!! TTTTTTTGCATATGAATGCA+GGG - chr5.2:12404561-12404580 MS.gene64720:intron 25.0%
AAAGTAAGGTCTAATTCAAC+TGG - chr5.2:12403701-12403720 MS.gene64720:CDS 30.0%
AAGTGAACTTACCATAAGTT+TGG + chr5.2:12403235-12403254 None:intergenic 30.0%
ACCATCTTGTTACTACATAT+AGG - chr5.2:12404889-12404908 MS.gene64720:intron 30.0%
ACCTATATGTAGTAACAAGA+TGG + chr5.2:12404893-12404912 None:intergenic 30.0%
ATATAGTTAATGGCATTTGG+AGG - chr5.2:12404431-12404450 MS.gene64720:intron 30.0%
ATATCATAAGTTCTCCCAAA+CGG - chr5.2:12404006-12404025 MS.gene64720:intron 30.0%
ATTAAAATTGAGGATGTGTG+TGG + chr5.2:12401279-12401298 None:intergenic 30.0%
ATTAAGGGTGGATATACATT+GGG - chr5.2:12403292-12403311 MS.gene64720:intron 30.0%
ATTCAGCCATTCAAAAAGTA+AGG - chr5.2:12403687-12403706 MS.gene64720:CDS 30.0%
CCAAAATAGGAAATGTAATC+TGG + chr5.2:12402242-12402261 None:intergenic 30.0%
GATAAGTAACATGCTAGATT+TGG - chr5.2:12402731-12402750 MS.gene64720:intron 30.0%
GCGTATTTCATGTAACATAT+AGG - chr5.2:12400936-12400955 MS.gene64720:CDS 30.0%
GGTACTTAATTCCAAAAGAT+TGG - chr5.2:12404582-12404601 MS.gene64720:intron 30.0%
TATGTGTGAATATATTGTGC+AGG - chr5.2:12402924-12402943 MS.gene64720:intron 30.0%
TCCATGGATCAAACTTATAA+GGG + chr5.2:12404661-12404680 None:intergenic 30.0%
TCTAATTCAACTGGCAATAT+CGG - chr5.2:12403710-12403729 MS.gene64720:CDS 30.0%
TCTTCCATTTCCTTTCTAAA+AGG - chr5.2:12404381-12404400 MS.gene64720:intron 30.0%
TGGTTACAAATATGTGCTAA+CGG - chr5.2:12401036-12401055 MS.gene64720:intron 30.0%
TTAAGACCTTGCTTATAACA+AGG + chr5.2:12402841-12402860 None:intergenic 30.0%
TTCTTCTTCATCTTAACAGT+TGG + chr5.2:12405030-12405049 None:intergenic 30.0%
TTTCAATGCTCGAAAATGTA+AGG + chr5.2:12401673-12401692 None:intergenic 30.0%
! ATTTTATTAGGAGGAGAACT+TGG - chr5.2:12404190-12404209 MS.gene64720:intron 30.0%
! CCAGATTACATTTCCTATTT+TGG - chr5.2:12402239-12402258 MS.gene64720:intron 30.0%
! TCATAAACTCGATGATGTTT+TGG + chr5.2:12403137-12403156 None:intergenic 30.0%
! TCTAGCATGTTACTTATCAT+AGG + chr5.2:12402729-12402748 None:intergenic 30.0%
! TTAAATCGGTTGATATTCTC+TGG - chr5.2:12401596-12401615 MS.gene64720:intron 30.0%
! TTTTTGGATCCTACTCTATA+GGG - chr5.2:12400861-12400880 MS.gene64720:intron 30.0%
!! ATAGGTTTCTTTTTAGGCTT+CGG + chr5.2:12402711-12402730 None:intergenic 30.0%
!! ATGACCTTTTAGAAAGGAAA+TGG + chr5.2:12404388-12404407 None:intergenic 30.0%
!! CTAATTGATTTTGGATAAGC+AGG + chr5.2:12401906-12401925 None:intergenic 30.0%
!! TCGTGATTTTAACATGTGAT+TGG - chr5.2:12404956-12404975 MS.gene64720:intron 30.0%
!!! CTTTTTTTGCATATGAATGC+AGG - chr5.2:12404560-12404579 MS.gene64720:intron 30.0%
!!! TTTTTTGGATCCTACTCTAT+AGG - chr5.2:12400860-12400879 MS.gene64720:intron 30.0%
AATGCTCGAAAATGTAAGGT+CGG + chr5.2:12401669-12401688 None:intergenic 35.0%
ACCCTTATAAGTTTGATCCA+TGG - chr5.2:12404657-12404676 MS.gene64720:intron 35.0%
ACTCTATACTCCAATTGAAC+GGG - chr5.2:12401943-12401962 MS.gene64720:intron 35.0%
ATAAGTTTGATCCATGGAGA+TGG - chr5.2:12404663-12404682 MS.gene64720:intron 35.0%
ATAAGTTTGGATAGAGCAAG+AGG + chr5.2:12403222-12403241 None:intergenic 35.0%
ATAGATCTCTCATGTGACAT+TGG + chr5.2:12401349-12401368 None:intergenic 35.0%
ATGTAGTAACAAGATGGTGA+AGG + chr5.2:12404887-12404906 None:intergenic 35.0%
ATTTCCCAGATGGTTATACA+TGG - chr5.2:12404234-12404253 MS.gene64720:intron 35.0%
CACTCTATACTCCAATTGAA+CGG - chr5.2:12401942-12401961 MS.gene64720:intron 35.0%
CATCAGTGAAACTCTTAGAA+TGG - chr5.2:12404405-12404424 MS.gene64720:intron 35.0%
CATCCATGTTTGTGATAGAA+GGG + chr5.2:12400576-12400595 None:intergenic 35.0%
CATTAAGGGTGGATATACAT+TGG - chr5.2:12403291-12403310 MS.gene64720:intron 35.0%
CATTGCTTAGCAGAGTAATA+TGG + chr5.2:12404091-12404110 None:intergenic 35.0%
CCTCGTTGAGAAATTATGAA+AGG + chr5.2:12400658-12400677 None:intergenic 35.0%
CCTTTCATAATTTCTCAACG+AGG - chr5.2:12400655-12400674 MS.gene64720:CDS 35.0%
CTAATTCAACTGGCAATATC+GGG - chr5.2:12403711-12403730 MS.gene64720:CDS 35.0%
CTCCATGGATCAAACTTATA+AGG + chr5.2:12404662-12404681 None:intergenic 35.0%
GGAGAGAATGAAGCTAATAA+TGG - chr5.2:12402987-12403006 MS.gene64720:intron 35.0%
GTTCTATGCTTGCAGAAAAT+TGG - chr5.2:12404768-12404787 MS.gene64720:intron 35.0%
TAAGGAAAGGATGATGAAGA+TGG - chr5.2:12402948-12402967 MS.gene64720:intron 35.0%
TAAGTTTGATCCATGGAGAT+GGG - chr5.2:12404664-12404683 MS.gene64720:intron 35.0%
TAAGTTTGGATAGAGCAAGA+GGG + chr5.2:12403221-12403240 None:intergenic 35.0%
TAATGCAGAAGATGATGAGA+AGG - chr5.2:12403014-12403033 MS.gene64720:intron 35.0%
TAGCAGAGTAATATGGACTT+GGG + chr5.2:12404084-12404103 None:intergenic 35.0%
TCAAACAATGCTTAGCATCT+TGG - chr5.2:12402057-12402076 MS.gene64720:intron 35.0%
TCATCCATGTTTGTGATAGA+AGG + chr5.2:12400577-12400596 None:intergenic 35.0%
TCTTGCTCTATCCAAACTTA+TGG - chr5.2:12403221-12403240 MS.gene64720:CDS 35.0%
TGAATATATTGTGCAGGCTA+AGG - chr5.2:12402930-12402949 MS.gene64720:intron 35.0%
TTAGCAGAGTAATATGGACT+TGG + chr5.2:12404085-12404104 None:intergenic 35.0%
! AAAAATAAAAGCATGGGGCA+GGG + chr5.2:12401309-12401328 None:intergenic 35.0%
! AGTTTTTGCAAGACCTAAGT+AGG + chr5.2:12402780-12402799 None:intergenic 35.0%
! GATTTGTATAGTGTTGTTCC+TGG + chr5.2:12402366-12402385 None:intergenic 35.0%
! TTATGGGTTGCACTCTAATT+GGG + chr5.2:12405056-12405075 None:intergenic 35.0%
!! TCACTGATGACCTTTTAGAA+AGG + chr5.2:12404394-12404413 None:intergenic 35.0%
!! TTTAGTTTGTGGGACCTTTA+AGG + chr5.2:12402388-12402407 None:intergenic 35.0%
AAAGGATGATGAAGATGGTG+GGG - chr5.2:12402953-12402972 MS.gene64720:intron 40.0%
AAATGGCAGTGACATGTAGT+CGG + chr5.2:12404261-12404280 None:intergenic 40.0%
AACAAGTCCAAATCTTCACC+AGG + chr5.2:12402288-12402307 None:intergenic 40.0%
AACAATTGCTTTACCCCGTT+TGG - chr5.2:12404804-12404823 MS.gene64720:intron 40.0%
AAGCTCAAGTTCAAACCTGA+TGG - chr5.2:12403098-12403117 MS.gene64720:intron 40.0%
AAGTTTGGATAGAGCAAGAG+GGG + chr5.2:12403220-12403239 None:intergenic 40.0%
ACAATTGCTTTACCCCGTTT+GGG - chr5.2:12404805-12404824 MS.gene64720:intron 40.0%
ACATAGTCACCCTATAGAGT+AGG + chr5.2:12400873-12400892 None:intergenic 40.0%
AGCAGAGTAATATGGACTTG+GGG + chr5.2:12404083-12404102 None:intergenic 40.0%
ATATTGTGCAGGCTAAGGAA+AGG - chr5.2:12402935-12402954 MS.gene64720:intron 40.0%
ATCATCGAGTTTATGATCCC+AGG - chr5.2:12403141-12403160 MS.gene64720:intron 40.0%
ATCTCTTACCTCTGTTCACA+TGG - chr5.2:12404616-12404635 MS.gene64720:intron 40.0%
ATGCTCGAAAATGTAAGGTC+GGG + chr5.2:12401668-12401687 None:intergenic 40.0%
CAAACTGCAATGAAACAGGA+AGG + chr5.2:12401170-12401189 None:intergenic 40.0%
CAGAAGACTAATTTCCCAGA+TGG - chr5.2:12404224-12404243 MS.gene64720:intron 40.0%
CAGTTTGCACATCTTCTCAA+TGG - chr5.2:12401183-12401202 MS.gene64720:intron 40.0%
CGGCGTGAATGCATAAAATT+TGG - chr5.2:12401056-12401075 MS.gene64720:intron 40.0%
CTGAAACGATCTCGATTCAA+TGG - chr5.2:12401016-12401035 MS.gene64720:intron 40.0%
GAAAGGATGATGAAGATGGT+GGG - chr5.2:12402952-12402971 MS.gene64720:intron 40.0%
GATCCCTTCTATCACAAACA+TGG - chr5.2:12400570-12400589 MS.gene64720:intron 40.0%
GGAATCAGTGAGGAATTTGA+GGG + chr5.2:12403199-12403218 None:intergenic 40.0%
GGGGTAAAGCAATTGTTACT+AGG + chr5.2:12404801-12404820 None:intergenic 40.0%
GTAAAACTGACACACACGAA+GGG + chr5.2:12403771-12403790 None:intergenic 40.0%
GTTGTTCCTGGAAACTTGAT+GGG + chr5.2:12402354-12402373 None:intergenic 40.0%
TAATTTCTCAACGAGGCCAA+TGG - chr5.2:12400662-12400681 MS.gene64720:CDS 40.0%
TCATCGAGTTTATGATCCCA+GGG - chr5.2:12403142-12403161 MS.gene64720:intron 40.0%
TGAATCTAGTGATCGCAAAG+TGG - chr5.2:12401094-12401113 MS.gene64720:CDS 40.0%
TGAATGCAGTTTCTTGTGCA+TGG + chr5.2:12401970-12401989 None:intergenic 40.0%
TGTAAAACTGACACACACGA+AGG + chr5.2:12403772-12403791 None:intergenic 40.0%
TGTGCAAACTGCAATGAAAC+AGG + chr5.2:12401174-12401193 None:intergenic 40.0%
TGTTGTTCCTGGAAACTTGA+TGG + chr5.2:12402355-12402374 None:intergenic 40.0%
! AGGTGGTTCTACTGAATCAA+AGG - chr5.2:12401868-12401887 MS.gene64720:intron 40.0%
! CAACGTCCTTGTTATAAGCA+AGG - chr5.2:12402832-12402851 MS.gene64720:intron 40.0%
! CATTCTTGTGTCATTAAGGG+TGG - chr5.2:12403280-12403299 MS.gene64720:CDS 40.0%
! GAAAAATAAAAGCATGGGGC+AGG + chr5.2:12401310-12401329 None:intergenic 40.0%
! GTTATGGGTTGCACTCTAAT+TGG + chr5.2:12405057-12405076 None:intergenic 40.0%
! TCCAAAAGATTGGGGTGTTA+TGG - chr5.2:12404592-12404611 MS.gene64720:intron 40.0%
!! GATATACATTGGGTTGAGCT+AGG - chr5.2:12403302-12403321 MS.gene64720:intron 40.0%
!! GTTAAAGTTTTGATGAGCGC+TGG - chr5.2:12402261-12402280 MS.gene64720:intron 40.0%
!! TTTTGAGTCCATGTGAACAG+AGG + chr5.2:12404627-12404646 None:intergenic 40.0%
AACAGACCCAGAAGTGAACA+AGG - chr5.2:12401848-12401867 MS.gene64720:intron 45.0%
ACAACTCACCCTTATCCCTT+AGG + chr5.2:12403071-12403090 None:intergenic 45.0%
ACAAGTCCTTGTAGACCGTT+TGG + chr5.2:12404024-12404043 None:intergenic 45.0%
AGAACCACCTTGTTCACTTC+TGG + chr5.2:12401858-12401877 None:intergenic 45.0%
AGTCTATGTCCACTCCCAAA+CGG + chr5.2:12404822-12404841 None:intergenic 45.0%
CAAGTCCTTGTAGACCGTTT+GGG + chr5.2:12404023-12404042 None:intergenic 45.0%
CACATCTTCTCAATGGAGTG+TGG - chr5.2:12401190-12401209 MS.gene64720:intron 45.0%
CATCGAGTTTATGATCCCAG+GGG - chr5.2:12403143-12403162 MS.gene64720:intron 45.0%
CGGTCCATGTATAACCATCT+GGG + chr5.2:12404241-12404260 None:intergenic 45.0%
CTCAAGTTCAAACCTGATGG+TGG - chr5.2:12403101-12403120 MS.gene64720:intron 45.0%
GAACCACCTTGTTCACTTCT+GGG + chr5.2:12401857-12401876 None:intergenic 45.0%
GATGCACTCCTAAGGGATAA+GGG - chr5.2:12403060-12403079 MS.gene64720:intron 45.0%
GCAGAAGATGATGAGAAGGT+TGG - chr5.2:12403018-12403037 MS.gene64720:intron 45.0%
GGAAAGGATGATGAAGATGG+TGG - chr5.2:12402951-12402970 MS.gene64720:intron 45.0%
GGCTAATCATTTCCACCATC+AGG + chr5.2:12403116-12403135 None:intergenic 45.0%
GGGAATCAGTGAGGAATTTG+AGG + chr5.2:12403200-12403219 None:intergenic 45.0%
TCGGTCCATGTATAACCATC+TGG + chr5.2:12404242-12404261 None:intergenic 45.0%
TGAATTACCTCCCATCTCCA+TGG + chr5.2:12404677-12404696 None:intergenic 45.0%
TGCTTACCCATCAAGTTTCC+AGG - chr5.2:12402345-12402364 MS.gene64720:CDS 45.0%
TGGTGTAGTGAATGATGTCG+TGG - chr5.2:12403038-12403057 MS.gene64720:intron 45.0%
TTGGTTTCCACAATGCAGCT+GGG - chr5.2:12404975-12404994 MS.gene64720:intron 45.0%
! ATTGGTTTCCACAATGCAGC+TGG - chr5.2:12404974-12404993 MS.gene64720:intron 45.0%
! GAAAATAGAGAGCTCTAGCC+TGG + chr5.2:12404865-12404884 None:intergenic 45.0%
! GCCATAACACCCCAATCTTT+TGG + chr5.2:12404596-12404615 None:intergenic 45.0%
! GCTCGATATTTCTGCAGCAA+TGG - chr5.2:12403833-12403852 MS.gene64720:intron 45.0%
!! TAATTTATTATTTCATAAAT+TGG - chr5.2:12401629-12401648 MS.gene64720:intron 5.0%
AGACCCAGAAGTGAACAAGG+TGG - chr5.2:12401851-12401870 MS.gene64720:intron 50.0%
AGTGAGGAATTTGAGGGCCA+AGG + chr5.2:12403193-12403212 None:intergenic 50.0%
AGTGGACATAGACTGTGTCC+TGG - chr5.2:12404828-12404847 MS.gene64720:intron 50.0%
ATGTCGTGGATGCACTCCTA+AGG - chr5.2:12403052-12403071 MS.gene64720:intron 50.0%
GAATTTGAGGGCCAAGGTCA+TGG + chr5.2:12403187-12403206 None:intergenic 50.0%
GATCGCAAAGTGGCTGGAAA+GGG - chr5.2:12401104-12401123 MS.gene64720:CDS 50.0%
GCTAGAGTAGACTGTGTGGA+AGG - chr5.2:12401374-12401393 MS.gene64720:intron 50.0%
GGATGCACTCCTAAGGGATA+AGG - chr5.2:12403059-12403078 MS.gene64720:intron 50.0%
GTCTATGTCCACTCCCAAAC+GGG + chr5.2:12404821-12404840 None:intergenic 50.0%
GTGGACATAGACTGTGTCCT+GGG - chr5.2:12404829-12404848 MS.gene64720:intron 50.0%
GTTCTCCCAAACGGTCTACA+AGG - chr5.2:12404015-12404034 MS.gene64720:intron 50.0%
GTTTGATCCATGGAGATGGG+AGG - chr5.2:12404667-12404686 MS.gene64720:intron 50.0%
TCCACACAGTCTACTCTAGC+TGG + chr5.2:12401374-12401393 None:intergenic 50.0%
TCCAGCTAGAGTAGACTGTG+TGG - chr5.2:12401370-12401389 MS.gene64720:intron 50.0%
TCTAGTGATCGCAAAGTGGC+TGG - chr5.2:12401098-12401117 MS.gene64720:CDS 50.0%
TCTATGTCCACTCCCAAACG+GGG + chr5.2:12404820-12404839 None:intergenic 50.0%
TGATCGCAAAGTGGCTGGAA+AGG - chr5.2:12401103-12401122 MS.gene64720:CDS 50.0%
TGTCGTGGATGCACTCCTAA+GGG - chr5.2:12403053-12403072 MS.gene64720:intron 50.0%
TGTGCATGGTCCCGTTCAAT+TGG + chr5.2:12401956-12401975 None:intergenic 50.0%
TTGGTGAGCATGCATGCCAT+TGG + chr5.2:12400681-12400700 None:intergenic 50.0%
! AGCCTGGAAAGTTCTAACCC+AGG + chr5.2:12404849-12404868 None:intergenic 50.0%
! GTCCTGGGTTAGAACTTTCC+AGG - chr5.2:12404844-12404863 MS.gene64720:intron 50.0%
AATGCAGCTGGGTAGCTGAG+AGG - chr5.2:12404986-12405005 MS.gene64720:intron 55.0%
AGGGGAAGAGACCCTTCCTA+CGG - chr5.2:12403161-12403180 MS.gene64720:CDS 55.0%
ATGCAGCTGGGTAGCTGAGA+GGG - chr5.2:12404987-12405006 MS.gene64720:intron 55.0%
CAAGGTCATGGCCGTAGGAA+GGG + chr5.2:12403175-12403194 None:intergenic 55.0%
CGCTGGTCCTGGTGAAGATT+TGG - chr5.2:12402278-12402297 MS.gene64720:intron 55.0%
GAGCAAGAGGGGAATCAGTG+AGG + chr5.2:12403209-12403228 None:intergenic 55.0%
TAGGAAGGGTCTCTTCCCCT+GGG + chr5.2:12403161-12403180 None:intergenic 55.0%
TCAGCTACCCAGCTGCATTG+TGG + chr5.2:12404985-12405004 None:intergenic 55.0%
TGCTTTACCCCGTTTGGGAG+TGG - chr5.2:12404810-12404829 MS.gene64720:intron 55.0%
!! GATGGTGGGGAGGATAGTTG+AGG - chr5.2:12402966-12402985 MS.gene64720:intron 55.0%
!! GGATGATGAAGATGGTGGGG+AGG - chr5.2:12402956-12402975 MS.gene64720:intron 55.0%
!!! GTTTTGATGAGCGCTGGTCC+TGG - chr5.2:12402267-12402286 MS.gene64720:intron 55.0%
CCAAGGTCATGGCCGTAGGA+AGG + chr5.2:12403176-12403195 None:intergenic 60.0%
CCTTCCTACGGCCATGACCT+TGG - chr5.2:12403173-12403192 MS.gene64720:CDS 60.0%
GTAGGAAGGGTCTCTTCCCC+TGG + chr5.2:12403162-12403181 None:intergenic 60.0%
AGGGCCAAGGTCATGGCCGT+AGG + chr5.2:12403180-12403199 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 12400468 12405083 12400468 ID=MS.gene64720
chr5.2 mRNA 12400468 12405083 12400468 ID=MS.gene64720.t1;Parent=MS.gene64720
chr5.2 exon 12405064 12405083 12405064 ID=MS.gene64720.t1.exon1;Parent=MS.gene64720.t1
chr5.2 CDS 12405064 12405083 12405064 ID=cds.MS.gene64720.t1;Parent=MS.gene64720.t1
chr5.2 exon 12403433 12403754 12403433 ID=MS.gene64720.t1.exon2;Parent=MS.gene64720.t1
chr5.2 CDS 12403433 12403754 12403433 ID=cds.MS.gene64720.t1;Parent=MS.gene64720.t1
chr5.2 exon 12403159 12403308 12403159 ID=MS.gene64720.t1.exon3;Parent=MS.gene64720.t1
chr5.2 CDS 12403159 12403308 12403159 ID=cds.MS.gene64720.t1;Parent=MS.gene64720.t1
chr5.2 exon 12402309 12402605 12402309 ID=MS.gene64720.t1.exon4;Parent=MS.gene64720.t1
chr5.2 CDS 12402309 12402605 12402309 ID=cds.MS.gene64720.t1;Parent=MS.gene64720.t1
chr5.2 exon 12401262 12401351 12401262 ID=MS.gene64720.t1.exon5;Parent=MS.gene64720.t1
chr5.2 CDS 12401262 12401351 12401262 ID=cds.MS.gene64720.t1;Parent=MS.gene64720.t1
chr5.2 exon 12401070 12401148 12401070 ID=MS.gene64720.t1.exon6;Parent=MS.gene64720.t1
chr5.2 CDS 12401070 12401148 12401070 ID=cds.MS.gene64720.t1;Parent=MS.gene64720.t1
chr5.2 exon 12400863 12400969 12400863 ID=MS.gene64720.t1.exon7;Parent=MS.gene64720.t1
chr5.2 CDS 12400863 12400969 12400863 ID=cds.MS.gene64720.t1;Parent=MS.gene64720.t1
chr5.2 exon 12400641 12400768 12400641 ID=MS.gene64720.t1.exon8;Parent=MS.gene64720.t1
chr5.2 CDS 12400641 12400768 12400641 ID=cds.MS.gene64720.t1;Parent=MS.gene64720.t1
chr5.2 exon 12400468 12400558 12400468 ID=MS.gene64720.t1.exon9;Parent=MS.gene64720.t1
chr5.2 CDS 12400468 12400558 12400468 ID=cds.MS.gene64720.t1;Parent=MS.gene64720.t1
Gene Sequence

>MS.gene64720

ATGGAAAAACGCAAGTCTATGTAAGCCTTATAAATTATAATAATTTATTTAATTATCCTAATTATTTTTATCATTATTGTTAATTGCTATATTATTTTATTTGATCCCTTCTATCACAAACATGGATGATATGATTTTGATTTATGATTCTTAATTGTAGTATTTTGCTTTTTGCATATTCTCATATCCTTTCATAATTTCTCAACGAGGCCAATGGCATGCATGCTCACCAAATAGTGAAATGTGAATCTTTGGAACCACAAAAACTTTAGTCTTAATTAAGAACCATAATAACTATTTACACAGTAGAACTTATATAAATTTTAATCGCTTACGCATTTATATATTTTTATACAAGTTTTTATGATATAATTTTGATCTCACTTATTAAATTTTTTGGATCCTACTCTATAGGGTGACTATGTTTAAACTTTCAATGAAAGATGATTGTCGGCAGTCAAAATTTTTGCGTATTTCATGTAACATATAGGTCTAGATGTCAAGTATACGATTTTTCTTTTAAAAGATATTAAAATTTGTATTATAATCTGAAACGATCTCGATTCAATGGTTACAAATATGTGCTAACGGCGTGAATGCATAAAATTTGGAATCCAATTTCATTTTGAATCTAGTGATCGCAAAGTGGCTGGAAAGGGTACTTCTACCCATAGCTATATTTTATAAATAATCAGCTAGCCTTCCTGTTTCATTGCAGTTTGCACATCTTCTCAATGGAGTGTGGCTAATTAAACCAATGCAGATAAAAAGTTACTATAAACTATACTCTCATATTTTTAATCTCATACCACACACATCCTCAATTTTAATATTTTAACCCTGCCCCATGCTTTTATTTTTCTAAGATTAAGATTTTGCCAATGTCACATGAGAGATCTATTTCCAGCTAGAGTAGACTGTGTGGAAGGAAATAATAATAGTATCCATGAGATCTATATGATTAAAGCAATTATTTTAGTAGTTTAAATGGTAGAAGTAGATGAGTAATTTAGTACCTCAAATTTTCGAATTGAACAATGTTAATCAATTTAGTCTTTTTTTATTATTCAGGACCATAAATTTTTAACTTTGATATATGTTTATTAAAGAGATATTTTAACTGAGAGATTAAATCGGTTGATATTCTCTGGTTTAAAATATTAATTTATTATTTCATAAATTGGAAAGACTAAATCGCCCGACCTTACATTTTCGAGCATTGAAATGTTGATAAACTCGACTACATATTCATATATAATTAATTAATAATCCCTTTCAATTAGTAAAAAGAAACGTGTTTTTATTTACATTTTGTATATGTAAATGCAGTTATGGGAATGTGTTTAAGACAAACATTTTGGGAAGCAATGTGATAATTTCAACAGACCCAGAAGTGAACAAGGTGGTTCTACTGAATCAAAGGAACATTTTTGTCCCTGCTTATCCAAAATCAATTAGAGAATTAATGGGAGAACACTCTATACTCCAATTGAACGGGACCATGCACAAGAAACTGCATTCACTCATTGCAGTGTTTCTTAAGTCCCCACAATTTAAATCTCAAATCACTAGAGATATTGAACACTCTGTCAAACAATGCTTAGCATCTTGGACCAACAAAACAATATATATTCAAGATGAAGTAAAAAAGGTCTCTCTTTTTTTTATTTAATAATGTTATTTTCTTTCACTATTTTTTTTTTATTTGAATACATTTATTTTCTCCTAATTATCTTTTCTCTTTTGAACTTTTTGTGGATGTGCATATATACCAGATTACATTTCCTATTTTGGTTAAAGTTTTGATGAGCGCTGGTCCTGGTGAAGATTTGGACTTGTTGAAAAGAGAATTTGAAGTATTCATCAAAGGCTTGATTTGCTTACCCATCAAGTTTCCAGGAACAACACTATACAAATCCTTAAAGGTCCCACAAACTAAATATATATAATTAATCTGATTTGTGTTAAACATTTTCATCTTTTTTTTGTGGAAAACATTTTCATTAATTCAAGTATATTAGCTTACATTATATTTTTGACATATTTAAATGTATTGTTATAAAATATAGTTGAGTAGATGGTCATATAAAGTCATAGTCTCTAAATATGATGTTAAATCACAAAATATAATTAATTTCATTGACATATTAACTCGTTATTCTATTTAAACATGTCGAATTACTTATTTGAATATATTAATATAAAATAGACTTTTAATTAAGCTTGCAAGTCAGAAAGAACCGAAGCCTAAAAAGAAACCTATGATAAGTAACATGCTAGATTTGGGTCTTGAATTTTTTTTATCTAGTCCTACTTAGGTCTTGCAAAAACTAGCTTGATTCAACCTACTTTCACATCTAATAACAACGTCCTTGTTATAAGCAAGGTCTTAATTATTAACAATAATATGAAGTTGAAATTAATTAGTTAGTTTGTGATTAAAGTGCGTAACTAATTATGTGTGAATATATTGTGCAGGCTAAGGAAAGGATGATGAAGATGGTGGGGAGGATAGTTGAGGAGAGAATGAAGCTAATAATGGATAATAATGCAGAAGATGATGAGAAGGTTGGTGTAGTGAATGATGTCGTGGATGCACTCCTAAGGGATAAGGGTGAGTTGTCTCAATCAAGCTCAAGTTCAAACCTGATGGTGGAAATGATTAGCCAAAACATCATCGAGTTTATGATCCCAGGGGAAGAGACCCTTCCTACGGCCATGACCTTGGCCCTCAAATTCCTCACTGATTCCCCTCTTGCTCTATCCAAACTTATGGTAAGTTCACTTAATTATGTTATGTACTATTTCTAATCATTCTTGTGTCATTAAGGGTGGATATACATTGGGTTGAGCTAGGTTTTGTAAGTTTAAGTATAACTAGTCAAAAAACATTCAAGGCATAAATCTAACTTCTTATGTGTCATAAGCTTATTGTTAGACTTAAGCGTGACCTTTTTAAAAGTCCAAATATTCATTTCTTATATGACGCATATTTAAATAGACTAATGAATGTATTAATGAGATCATGCACCATTTTGATATTTTACATGATATTTCATAGAATCTAACTTTATATGATATCATATTTTAATTTTATTTTAAATAATACATTTAAATATGCAAAATAAATAAATAAATGTAGTCTAATATGCTTAAATTATTGAACATATCAAATTTATAATTTAAAATAAATTACATAATCTAATATAATAAGGTCTAATTCAGCCATTCAAAAAGTAAGGTCTAATTCAACTGGCAATATCGGGATTTGTGTTTACTCAATTTCGAACATAAGATTCTCCCTTCGTGTGTGTCAGTTTTACATTAAAAAAAAAGTTTGTTTCCTTTGAATAACAGAAAATTTTGCTCGATATTTCTGCAGCAATGGTGCAATGTCATATCTCCACTTACATAAACGTTTATTATAATAAGCGCTTATTTATAAGCTATTTCTATACAAAAGAAAGAATAAAGTTAAATTATTTTCATATGTTGTCTCAGAGAGTTTATGAAAATGAGCTAAAGACAACTCTTGAACATATCATAAGTTCTCCCAAACGGTCTACAAGGACTTGTGTCAGTAAGAAGCTTAAATAAATCAATTCAAACATTCCCCAAGTCCATATTACTCTGCTAAGCAATGAAAACTTTGAAGTTATTAATCTTGTGGACTAAATACTCAACCAAATAAAAATTTCATATATGATTTATCTGATTCATTTATTTTATTAGGAGGAGAACTTGGAATTGAAGAAGCAGAAGACTAATTTCCCAGATGGTTATACATGGACCGACTACATGTCACTGCCATTTACTCAAAATGTGAGTTTCCAATGTTAACTTTCTTATATATACAATATCAGTTTTTACCCTATAAAAAATGTGATTACAGCATTATTAGTTCATTGATTTCTCTTCCATTTCCTTTCTAAAAGGTCATCAGTGAAACTCTTAGAATGGCAAATATAGTTAATGGCATTTGGAGGAAAGCAGTCAAAGATGTAGAAATTAAAGGTAGTGTAGTTATTCACAAGATAAGTTATCTTTGGCATAAATGCATACAAATAAAAAAAAAATACTAATGCAGTTTAACTTTTTTTGCATATGAATGCAGGGTACTTAATTCCAAAAGATTGGGGTGTTATGGCATCTCTTACCTCTGTTCACATGGACTCAAAAATCTATGAAAACCCTTATAAGTTTGATCCATGGAGATGGGAGGTAATTCAGCTTCTAAACCTATATCTAGTCATGTTTATATAAAGATCATATAATTACATGAAGCAATTATATATACAATGTTCTATGCTTGCAGAAAATTGGAGTTGTGCCTAGTAACAATTGCTTTACCCCGTTTGGGAGTGGACATAGACTGTGTCCTGGGTTAGAACTTTCCAGGCTAGAGCTCTCTATTTTCCTTCACCATCTTGTTACTACATATAGGTAATATTATAATATCTAACCTATAATTTTTTTGTTCATAATGTTTCGTGATTTTAACATGTGATTGGTTTCCACAATGCAGCTGGGTAGCTGAGAGGGATGAAATAATATACTTTCCAACTGTTAAGATGAAGAAGAAGCTCCCAATTAGAGTGCAACCCATAACCGCTTGA
Protein sequence

>MS.gene64720.t1

MEKRKSIYGNVFKTNILGSNVIISTDPEVNKVVLLNQRNIFVPAYPKSIRELMGEHSILQLNGTMHKKLHSLIAVFLKSPQFKSQITRDIEHSVKQCLASWTNKTIYIQDEVKKITFPILVKVLMSAGPGEDLDLLKREFEVFIKGLICLPIKFPGTTLYKSLKAKERMMKMVGRIVEERMKLIMDNNAEDDEKVGVVNDVVDALLRDKGELSQSSSSSNLMVEMISQNIIEFMIPGEETLPTAMTLALKFLTDSPLALSKLMEENLELKKQKTNFPDGYTWTDYMSLPFTQNVISETLRMANIVNGIWRKAVKDVEIKGYLIPKDWGVMASLTSVHMDSKIYENPYKFDPWRWEKIGVVPSNNCFTPFGSGHRLCPGLELSRLELSIFLHHLVTTYSWVAERDEIIYFPTVKMKKKLPIRVQPITA