Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65132.t1 | XP_003622996.1 | 98 | 444 | 9 | 0 | 1 | 444 | 1 | 444 | 4.20E-257 | 896.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65132.t1 | Q9LJ42 | 76.4 | 436 | 98 | 2 | 11 | 444 | 8 | 440 | 4.7e-196 | 685.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65132.t1 | G7L2D3 | 98.0 | 444 | 9 | 0 | 1 | 444 | 1 | 444 | 3.1e-257 | 896.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05652 | MS.gene65132 | 0.809871 | 1.53E-50 | -1.69E-46 |
| MS.gene057669 | MS.gene65132 | 0.810404 | 1.17E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65132.t1 | MTR_7g059290 | 97.973 | 444 | 9 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| MS.gene65132.t1 | MTR_1g047370 | 75.561 | 446 | 102 | 3 | 6 | 444 | 5 | 450 | 0.0 | 685 |
| MS.gene65132.t1 | MTR_4g104320 | 71.728 | 382 | 107 | 1 | 64 | 444 | 26 | 407 | 0.0 | 580 |
| MS.gene65132.t1 | MTR_6g021950 | 65.803 | 386 | 132 | 0 | 59 | 444 | 19 | 404 | 0.0 | 563 |
| MS.gene65132.t1 | MTR_3g075320 | 70.466 | 386 | 114 | 0 | 59 | 444 | 21 | 406 | 0.0 | 556 |
| MS.gene65132.t1 | MTR_3g086310 | 69.171 | 386 | 116 | 2 | 59 | 444 | 21 | 403 | 0.0 | 531 |
| MS.gene65132.t1 | MTR_1g111590 | 62.069 | 377 | 140 | 1 | 62 | 435 | 30 | 406 | 1.50e-177 | 503 |
| MS.gene65132.t1 | MTR_3g086320 | 63.377 | 385 | 138 | 3 | 62 | 444 | 23 | 406 | 8.25e-177 | 501 |
| MS.gene65132.t1 | MTR_1g062930 | 60.471 | 382 | 144 | 1 | 66 | 440 | 34 | 415 | 6.22e-175 | 498 |
| MS.gene65132.t1 | MTR_7g102940 | 63.564 | 376 | 136 | 1 | 66 | 440 | 35 | 410 | 5.29e-174 | 496 |
| MS.gene65132.t1 | MTR_4g107870 | 55.440 | 386 | 163 | 4 | 66 | 444 | 51 | 434 | 5.70e-157 | 451 |
| MS.gene65132.t1 | MTR_5g038510 | 58.873 | 355 | 145 | 1 | 91 | 444 | 95 | 449 | 4.83e-148 | 429 |
| MS.gene65132.t1 | MTR_8g468980 | 55.801 | 362 | 152 | 2 | 91 | 444 | 94 | 455 | 3.15e-145 | 422 |
| MS.gene65132.t1 | MTR_2g023990 | 56.000 | 350 | 150 | 3 | 96 | 444 | 63 | 409 | 1.04e-142 | 414 |
| MS.gene65132.t1 | MTR_5g038490 | 50.224 | 446 | 211 | 3 | 10 | 444 | 4 | 449 | 1.62e-142 | 415 |
| MS.gene65132.t1 | MTR_4g132460 | 57.429 | 350 | 145 | 3 | 96 | 444 | 39 | 385 | 3.66e-142 | 412 |
| MS.gene65132.t1 | MTR_6g011420 | 56.780 | 354 | 152 | 1 | 92 | 444 | 100 | 453 | 1.71e-141 | 412 |
| MS.gene65132.t1 | MTR_3g075320 | 70.787 | 267 | 78 | 0 | 59 | 325 | 21 | 287 | 3.13e-139 | 400 |
| MS.gene65132.t1 | MTR_7g009390 | 48.690 | 458 | 197 | 6 | 9 | 444 | 10 | 451 | 4.39e-138 | 404 |
| MS.gene65132.t1 | MTR_8g078390 | 45.070 | 355 | 185 | 7 | 96 | 444 | 42 | 392 | 3.24e-100 | 305 |
| MS.gene65132.t1 | MTR_8g078310 | 44.507 | 355 | 187 | 7 | 96 | 444 | 42 | 392 | 3.82e-100 | 305 |
| MS.gene65132.t1 | MTR_3g030900 | 44.507 | 355 | 187 | 7 | 96 | 444 | 23 | 373 | 1.73e-99 | 302 |
| MS.gene65132.t1 | MTR_8g078280 | 43.662 | 355 | 190 | 7 | 96 | 444 | 42 | 392 | 2.44e-96 | 295 |
| MS.gene65132.t1 | MTR_8g078350 | 45.352 | 355 | 184 | 7 | 96 | 444 | 42 | 392 | 5.76e-94 | 289 |
| MS.gene65132.t1 | MTR_4g064420 | 43.553 | 349 | 174 | 7 | 96 | 440 | 42 | 371 | 8.59e-92 | 283 |
| MS.gene65132.t1 | MTR_5g019160 | 45.070 | 355 | 185 | 7 | 96 | 444 | 41 | 391 | 1.51e-89 | 277 |
| MS.gene65132.t1 | MTR_5g019060 | 43.662 | 355 | 190 | 7 | 96 | 444 | 41 | 391 | 1.37e-87 | 272 |
| MS.gene65132.t1 | MTR_5g035840 | 42.697 | 356 | 192 | 8 | 96 | 444 | 41 | 391 | 1.39e-86 | 270 |
| MS.gene65132.t1 | MTR_5g019170 | 45.376 | 346 | 179 | 7 | 96 | 435 | 41 | 382 | 2.88e-86 | 271 |
| MS.gene65132.t1 | MTR_5g019090 | 44.225 | 355 | 188 | 7 | 96 | 444 | 41 | 391 | 3.55e-86 | 269 |
| MS.gene65132.t1 | MTR_3g070740 | 61.538 | 208 | 67 | 3 | 238 | 444 | 131 | 326 | 1.75e-85 | 265 |
| MS.gene65132.t1 | MTR_1g069950 | 44.981 | 269 | 144 | 3 | 171 | 437 | 1 | 267 | 8.42e-75 | 235 |
| MS.gene65132.t1 | MTR_2g023980 | 48.638 | 257 | 98 | 7 | 171 | 425 | 1 | 225 | 9.05e-69 | 222 |
| MS.gene65132.t1 | MTR_6g077900 | 44.727 | 275 | 129 | 6 | 129 | 401 | 6 | 259 | 7.09e-62 | 202 |
| MS.gene65132.t1 | MTR_1g115550 | 36.806 | 288 | 156 | 7 | 113 | 399 | 13 | 275 | 2.10e-39 | 144 |
| MS.gene65132.t1 | MTR_1g067450 | 35.540 | 287 | 161 | 4 | 113 | 399 | 62 | 324 | 5.41e-37 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65132.t1 | AT4G13710 | 75.231 | 432 | 97 | 4 | 23 | 444 | 39 | 470 | 0.0 | 682 |
| MS.gene65132.t1 | AT4G13710 | 76.123 | 423 | 91 | 4 | 32 | 444 | 29 | 451 | 0.0 | 677 |
| MS.gene65132.t1 | AT3G24670 | 76.376 | 436 | 98 | 2 | 11 | 444 | 8 | 440 | 0.0 | 668 |
| MS.gene65132.t1 | AT3G07010 | 81.378 | 392 | 73 | 0 | 53 | 444 | 25 | 416 | 0.0 | 665 |
| MS.gene65132.t1 | AT1G04680 | 80.977 | 389 | 70 | 1 | 60 | 444 | 41 | 429 | 0.0 | 660 |
| MS.gene65132.t1 | AT4G13210 | 74.424 | 434 | 102 | 2 | 12 | 444 | 13 | 438 | 0.0 | 641 |
| MS.gene65132.t1 | AT5G48900 | 81.538 | 390 | 72 | 0 | 55 | 444 | 28 | 417 | 0.0 | 636 |
| MS.gene65132.t1 | AT3G07010 | 82.880 | 368 | 63 | 0 | 77 | 444 | 16 | 383 | 0.0 | 636 |
| MS.gene65132.t1 | AT4G13210 | 79.695 | 394 | 79 | 1 | 52 | 444 | 8 | 401 | 0.0 | 630 |
| MS.gene65132.t1 | AT3G24230 | 65.632 | 451 | 141 | 6 | 6 | 444 | 3 | 451 | 0.0 | 594 |
| MS.gene65132.t1 | AT1G67750 | 71.916 | 381 | 105 | 1 | 64 | 444 | 30 | 408 | 0.0 | 572 |
| MS.gene65132.t1 | AT5G63180 | 68.421 | 399 | 116 | 2 | 48 | 444 | 42 | 432 | 0.0 | 570 |
| MS.gene65132.t1 | AT4G24780 | 71.728 | 382 | 107 | 1 | 64 | 444 | 27 | 408 | 0.0 | 559 |
| MS.gene65132.t1 | AT4G24780 | 71.728 | 382 | 107 | 1 | 64 | 444 | 27 | 408 | 0.0 | 559 |
| MS.gene65132.t1 | AT3G27400 | 66.404 | 381 | 127 | 1 | 64 | 444 | 37 | 416 | 0.0 | 531 |
| MS.gene65132.t1 | AT3G27400 | 66.404 | 381 | 127 | 1 | 64 | 444 | 33 | 412 | 0.0 | 530 |
| MS.gene65132.t1 | AT3G53190 | 58.042 | 429 | 146 | 4 | 8 | 436 | 20 | 414 | 1.63e-172 | 493 |
| MS.gene65132.t1 | AT5G04310 | 57.561 | 410 | 158 | 2 | 42 | 435 | 25 | 434 | 3.03e-170 | 486 |
| MS.gene65132.t1 | AT5G04310 | 57.561 | 410 | 158 | 2 | 42 | 435 | 25 | 434 | 7.04e-169 | 484 |
| MS.gene65132.t1 | AT5G04310 | 57.561 | 410 | 158 | 2 | 42 | 435 | 25 | 434 | 7.04e-169 | 484 |
| MS.gene65132.t1 | AT3G54920 | 57.360 | 394 | 144 | 4 | 62 | 440 | 32 | 416 | 4.39e-163 | 469 |
| MS.gene65132.t1 | AT5G55720 | 55.875 | 383 | 157 | 5 | 63 | 444 | 21 | 392 | 2.21e-154 | 443 |
| MS.gene65132.t1 | AT1G11920 | 59.714 | 350 | 138 | 3 | 96 | 444 | 37 | 384 | 5.33e-154 | 442 |
| MS.gene65132.t1 | AT3G01270 | 53.301 | 409 | 181 | 3 | 46 | 444 | 67 | 475 | 3.41e-152 | 441 |
| MS.gene65132.t1 | AT1G14420 | 55.556 | 360 | 154 | 1 | 91 | 444 | 100 | 459 | 3.11e-149 | 432 |
| MS.gene65132.t1 | AT5G15110 | 57.465 | 355 | 149 | 2 | 92 | 444 | 118 | 472 | 1.39e-148 | 431 |
| MS.gene65132.t1 | AT4G22090 | 56.857 | 350 | 147 | 3 | 96 | 444 | 47 | 393 | 4.97e-147 | 424 |
| MS.gene65132.t1 | AT4G22080 | 56.857 | 350 | 147 | 3 | 96 | 444 | 47 | 393 | 1.10e-146 | 424 |
| MS.gene65132.t1 | AT2G02720 | 46.916 | 454 | 222 | 5 | 6 | 444 | 6 | 455 | 8.53e-142 | 413 |
| MS.gene65132.t1 | AT1G30350 | 53.009 | 349 | 148 | 3 | 96 | 444 | 36 | 368 | 9.37e-129 | 377 |
| MS.gene65132.t1 | AT5G09280 | 48.387 | 248 | 125 | 3 | 129 | 375 | 6 | 251 | 3.40e-78 | 245 |
| MS.gene65132.t1 | AT3G09540 | 38.408 | 289 | 150 | 7 | 113 | 399 | 61 | 323 | 2.32e-42 | 154 |
| MS.gene65132.t1 | AT3G55140 | 37.884 | 293 | 146 | 9 | 113 | 399 | 14 | 276 | 5.21e-42 | 152 |
| MS.gene65132.t1 | AT3G09540 | 38.062 | 289 | 147 | 8 | 113 | 399 | 61 | 319 | 9.49e-40 | 147 |
| MS.gene65132.t1 | AT3G55140 | 36.719 | 256 | 131 | 7 | 150 | 399 | 22 | 252 | 5.38e-35 | 132 |
| MS.gene65132.t1 | AT3G09540 | 36.992 | 246 | 129 | 5 | 113 | 357 | 61 | 281 | 7.59e-35 | 131 |
Find 143 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATTGCATACAACCATTT+TGG | 0.110425 | 7.1:-42340106 | MS.gene65132:CDS |
| CGTAGCTCCCCTTCCCATTT+TGG | 0.137331 | 7.1:-42340507 | MS.gene65132:CDS |
| TCTTTGGTTCCAGTCATATT+TGG | 0.228663 | 7.1:-42340449 | MS.gene65132:CDS |
| TCATGATCAATTCTTGCTTC+AGG | 0.237394 | 7.1:+42340670 | None:intergenic |
| TGGTCTTGTTGATGCTATTA+TGG | 0.249104 | 7.1:-42340394 | MS.gene65132:CDS |
| CCATTGTCCTCCATCCAAAA+TGG | 0.255429 | 7.1:+42340493 | None:intergenic |
| ATGATACAGGTTATGTTATT+AGG | 0.266694 | 7.1:-42340169 | MS.gene65132:intron |
| GGTGATGGCATTTCCATCTT+TGG | 0.269913 | 7.1:-42340465 | MS.gene65132:CDS |
| TATGCTAGAGCCTCAAGTTT+AGG | 0.285322 | 7.1:-42339403 | MS.gene65132:CDS |
| TGGATACAGGGTCCGGAGTA+TGG | 0.302482 | 7.1:-42339510 | MS.gene65132:CDS |
| GCTGATTGTGCCATTGGTTT+TGG | 0.316248 | 7.1:-42340846 | MS.gene65132:CDS |
| CACAATCAGCCAACCGCTTT+CGG | 0.318646 | 7.1:+42340859 | None:intergenic |
| CTAGTTACCTTGGCATCCTT+TGG | 0.320663 | 7.1:+42340071 | None:intergenic |
| TTCACGGGGTCGTCGTCCCT+TGG | 0.325090 | 7.1:+42340774 | None:intergenic |
| TGACGGAGAGTGCCAGGTCT+TGG | 0.329790 | 7.1:+42340750 | None:intergenic |
| TCGGCTTACAATCATGGATA+TGG | 0.339277 | 7.1:+42340547 | None:intergenic |
| ATGCTAGAGCCTCAAGTTTA+GGG | 0.340135 | 7.1:-42339402 | MS.gene65132:CDS |
| TTGTAAGAATGTTACCTCTT+TGG | 0.340895 | 7.1:+42339632 | None:intergenic |
| GGATAAGACCCTCCCCAAAA+TGG | 0.344066 | 7.1:+42340092 | None:intergenic |
| ACCAACTAAAGAAGATGATT+TGG | 0.350395 | 7.1:+42339378 | None:intergenic |
| GCCAATGTTCATATTGCCTT+TGG | 0.350632 | 7.1:-42340618 | MS.gene65132:CDS |
| ATTGGCACCACGACCATCTA+TGG | 0.380940 | 7.1:+42340635 | None:intergenic |
| GCCAAATCATCTTCTTTAGT+TGG | 0.384213 | 7.1:-42339379 | MS.gene65132:CDS |
| CATGATCAATTCTTGCTTCA+GGG | 0.386947 | 7.1:+42340671 | None:intergenic |
| AATGTTACCTCTTTGGCAAA+AGG | 0.387769 | 7.1:+42339639 | None:intergenic |
| GACGGAGAGTGCCAGGTCTT+GGG | 0.402712 | 7.1:+42340751 | None:intergenic |
| GGTCTTGTTGATGCTATTAT+GGG | 0.421679 | 7.1:-42340393 | MS.gene65132:CDS |
| TTGCCTTGGCTGTTAATTGT+GGG | 0.427394 | 7.1:+42339684 | None:intergenic |
| TCCCAGTCGGCTTACAATCA+TGG | 0.429765 | 7.1:+42340541 | None:intergenic |
| TCACGGGGTCGTCGTCCCTT+GGG | 0.434927 | 7.1:+42340775 | None:intergenic |
| GAGTATGGAAGGGTTGGAAT+TGG | 0.435726 | 7.1:-42339495 | MS.gene65132:CDS |
| AGTGCCAGGTCTTGGGTTCA+CGG | 0.439411 | 7.1:+42340758 | None:intergenic |
| AACAGTTTCAAGACCATAGA+TGG | 0.441561 | 7.1:-42340648 | MS.gene65132:CDS |
| CACTGGGTGATGTATGCTAT+TGG | 0.442502 | 7.1:-42339720 | MS.gene65132:CDS |
| GTTGCCTTGGCTGTTAATTG+TGG | 0.451055 | 7.1:+42339683 | None:intergenic |
| CTCAATTTACCTCGTTGTGG+TGG | 0.451940 | 7.1:+42340334 | None:intergenic |
| TATGGAAGGGTTGGAATTGG+AGG | 0.453341 | 7.1:-42339492 | MS.gene65132:CDS |
| GTGCCAGGTCTTGGGTTCAC+GGG | 0.453527 | 7.1:+42340759 | None:intergenic |
| CCTTCCATCACGACCACCTA+TGG | 0.459042 | 7.1:+42340815 | None:intergenic |
| GTGACAAAGAGGGTGGATAC+AGG | 0.460057 | 7.1:-42339523 | MS.gene65132:CDS |
| ATGTTACCTCTTTGGCAAAA+GGG | 0.462229 | 7.1:+42339640 | None:intergenic |
| ACGGCGTGACGGAGAGTGCC+AGG | 0.476026 | 7.1:+42340744 | None:intergenic |
| AATATGACTGGAACCAAAGA+TGG | 0.477110 | 7.1:+42340452 | None:intergenic |
| TTAGTTGGTACTTTAACTGC+AGG | 0.478938 | 7.1:-42339364 | MS.gene65132:CDS |
| GTGGTGGGTGAAGTAGTTAT+TGG | 0.479572 | 7.1:+42340350 | None:intergenic |
| GGTTGGAATTGGAGGTCTGA+GGG | 0.482075 | 7.1:-42339484 | MS.gene65132:CDS |
| CTGGTGTTATTAAATGTCGC+CGG | 0.482263 | 7.1:-42339339 | MS.gene65132:CDS |
| CGGTTGGCTGATTGTGCCAT+TGG | 0.488142 | 7.1:-42340852 | MS.gene65132:CDS |
| GCTGGCGCTGTGATAAGCTT+TGG | 0.490871 | 7.1:-42340890 | MS.gene65132:CDS |
| AAGAAGTGTTATAGCGAGAA+TGG | 0.490910 | 7.1:+42344417 | None:intergenic |
| ATCCATGATTGTAAGCCGAC+TGG | 0.492456 | 7.1:-42340543 | MS.gene65132:CDS |
| GCCGCAGCTCCTCTTCCTGA+TGG | 0.492712 | 7.1:+42339430 | None:intergenic |
| CAGCGCCAGCAGTCATCCAT+TGG | 0.493207 | 7.1:+42340903 | None:intergenic |
| CATTGTCCTCCATCCAAAAT+GGG | 0.494585 | 7.1:+42340494 | None:intergenic |
| TCCTGAGGAGATTGCTTCCA+TGG | 0.495371 | 7.1:-42343776 | MS.gene65132:CDS |
| TCTCTGTCTAATTGCGCTGA+TGG | 0.499109 | 7.1:-42340414 | MS.gene65132:CDS |
| TGGTGTTATTAAATGTCGCC+GGG | 0.500739 | 7.1:-42339338 | MS.gene65132:CDS |
| GTAGTTATTGGAAACGGTAA+TGG | 0.501809 | 7.1:+42340362 | None:intergenic |
| TACAGGGTCCGGAGTATGGA+AGG | 0.503644 | 7.1:-42339506 | MS.gene65132:CDS |
| GTGAAGCAACAATGGAGTTA+CGG | 0.503946 | 7.1:-42344462 | None:intergenic |
| CCCAAAATGGTTGTATGCAA+TGG | 0.513203 | 7.1:+42340105 | None:intergenic |
| GGGCAAGGTATCTGTTGCCT+TGG | 0.513269 | 7.1:+42339670 | None:intergenic |
| GAAATCCAATGGATGACTGC+TGG | 0.513725 | 7.1:-42340908 | MS.gene65132:CDS |
| GGTACTTTAACTGCAGGTGC+TGG | 0.514799 | 7.1:-42339358 | MS.gene65132:CDS |
| ATTGGAAACGGTAATGGCGG+TGG | 0.517945 | 7.1:+42340368 | None:intergenic |
| GTCACGCCGTCATTCAAGAT+AGG | 0.520035 | 7.1:-42340731 | MS.gene65132:CDS |
| CATGATGATAGTGTTGTGAA+TGG | 0.528531 | 7.1:-42344217 | MS.gene65132:intron |
| GTGGTCAATCCAAATATGAC+TGG | 0.530763 | 7.1:+42340440 | None:intergenic |
| CTTTGGCAAAAGGGTTCTGA+GGG | 0.532600 | 7.1:+42339649 | None:intergenic |
| AATAGTAATGCATGCTCCAA+AGG | 0.544329 | 7.1:+42340602 | None:intergenic |
| TCTTTGGCAAAAGGGTTCTG+AGG | 0.544752 | 7.1:+42339648 | None:intergenic |
| TCCATGATTGTAAGCCGACT+GGG | 0.546175 | 7.1:-42340542 | MS.gene65132:CDS |
| ACCATGGAAGCAATCTCCTC+AGG | 0.547358 | 7.1:+42343775 | None:intergenic |
| GAGCTTGAATAATTCATCAA+TGG | 0.547562 | 7.1:-42344173 | MS.gene65132:CDS |
| AACGCCATAGGTGGTCGTGA+TGG | 0.550155 | 7.1:-42340819 | MS.gene65132:CDS |
| AAGAGGGTGGATACAGGGTC+CGG | 0.551709 | 7.1:-42339517 | MS.gene65132:CDS |
| GTCGTTATGATCAATAGCAT+TGG | 0.551956 | 7.1:+42344384 | None:intergenic |
| TCAATTTACCTCGTTGTGGT+GGG | 0.552926 | 7.1:+42340335 | None:intergenic |
| TTGGGGAGGGTCTTATCCAA+AGG | 0.555778 | 7.1:-42340087 | MS.gene65132:CDS |
| TCCTCCATCCAAAATGGGAA+GGG | 0.556374 | 7.1:+42340499 | None:intergenic |
| GGTCCGGAGTATGGAAGGGT+TGG | 0.562652 | 7.1:-42339501 | MS.gene65132:CDS |
| GTCTTATCCAAAGGATGCCA+AGG | 0.567344 | 7.1:-42340078 | MS.gene65132:intron |
| CTATTGATCATAACGACTCA+AGG | 0.567769 | 7.1:-42344378 | MS.gene65132:intron |
| GGTGAAGTAGTTATTGGAAA+CGG | 0.568326 | 7.1:+42340356 | None:intergenic |
| GACCCCGTGAACCCAAGACC+TGG | 0.571184 | 7.1:-42340762 | MS.gene65132:CDS |
| GTCCTCCATCCAAAATGGGA+AGG | 0.575724 | 7.1:+42340498 | None:intergenic |
| GTACAGACGCCGAAAGCGGT+TGG | 0.577446 | 7.1:-42340868 | MS.gene65132:CDS |
| TGTATTAACACATGCCACCC+CGG | 0.580417 | 7.1:+42339320 | None:intergenic |
| TACGCAATCACACGGAGAGA+AGG | 0.580498 | 7.1:-42340959 | MS.gene65132:CDS |
| TGCCAGGTCTTGGGTTCACG+GGG | 0.582221 | 7.1:+42340760 | None:intergenic |
| TGACAAAGAGGGTGGATACA+GGG | 0.585715 | 7.1:-42339522 | MS.gene65132:CDS |
| GGGTTGGAATTGGAGGTCTG+AGG | 0.587913 | 7.1:-42339485 | MS.gene65132:CDS |
| CCATAGGTGGTCGTGATGGA+AGG | 0.589228 | 7.1:-42340815 | MS.gene65132:CDS |
| CCTCCATCCAAAATGGGAAG+GGG | 0.592528 | 7.1:+42340500 | None:intergenic |
| CAATGGCCTATCTTGAATGA+CGG | 0.593970 | 7.1:+42340725 | None:intergenic |
| TTTGGTCGAAACGCCATAGG+TGG | 0.595051 | 7.1:-42340828 | MS.gene65132:CDS |
| TAAACAATGACTATACACAC+TGG | 0.595352 | 7.1:-42339737 | MS.gene65132:CDS |
| ATAATTCATCAATGGCGGAA+AGG | 0.597934 | 7.1:-42344165 | MS.gene65132:intron |
| AGTCTCAATTTACCTCGTTG+TGG | 0.602217 | 7.1:+42340331 | None:intergenic |
| ATGTGGGACTGGAAATCCAA+TGG | 0.603052 | 7.1:-42340919 | MS.gene65132:CDS |
| CAAAAGGGTTCTGAGGGGCA+AGG | 0.604683 | 7.1:+42339655 | None:intergenic |
| TCCAAAGGCAATATGAACAT+TGG | 0.605546 | 7.1:+42340617 | None:intergenic |
| TGATTTGGCCCCTAAACTTG+AGG | 0.605907 | 7.1:+42339393 | None:intergenic |
| ATTCCAACCCTTCCATACTC+CGG | 0.611120 | 7.1:+42339498 | None:intergenic |
| ATCACCAATGTCATCATCCA+CGG | 0.611342 | 7.1:-42340573 | MS.gene65132:CDS |
| CTTGAATAATTCATCAATGG+CGG | 0.613119 | 7.1:-42344170 | MS.gene65132:CDS |
| TTCAAGACCATAGATGGTCG+TGG | 0.615460 | 7.1:-42340642 | MS.gene65132:CDS |
| GTTATTAAATGTCGCCGGGG+TGG | 0.616534 | 7.1:-42339334 | MS.gene65132:CDS |
| TATCTTGAATGACGGCGTGA+CGG | 0.616846 | 7.1:+42340733 | None:intergenic |
| AGGACAATGGCTGATGGTGA+TGG | 0.620179 | 7.1:-42340480 | MS.gene65132:CDS |
| TCATTCAAGATAGGCCATTG+TGG | 0.624115 | 7.1:-42340722 | MS.gene65132:CDS |
| TAAGCCGACTGGGAATGCTA+TGG | 0.626089 | 7.1:-42340532 | MS.gene65132:CDS |
| CGCAATTAGACAGAGAGTTG+TGG | 0.627312 | 7.1:+42340421 | None:intergenic |
| TCCATCAGGAAGAGGAGCTG+CGG | 0.628803 | 7.1:-42339431 | MS.gene65132:CDS |
| GGCGTTTCGACCAAAACCAA+TGG | 0.630973 | 7.1:+42340836 | None:intergenic |
| TGGGTGATGTATGCTATTGG+AGG | 0.631164 | 7.1:-42339717 | MS.gene65132:CDS |
| CAGGACTATACGCAATCACA+CGG | 0.632843 | 7.1:-42340967 | MS.gene65132:CDS |
| GGATGGAGGACAATGGCTGA+TGG | 0.643191 | 7.1:-42340486 | MS.gene65132:CDS |
| AAACAATGACTATACACACT+GGG | 0.644998 | 7.1:-42339736 | MS.gene65132:CDS |
| TTTGGTACAGACGCCGAAAG+CGG | 0.645650 | 7.1:-42340872 | MS.gene65132:CDS |
| TGCTAGAGCCTCAAGTTTAG+GGG | 0.654577 | 7.1:-42339401 | MS.gene65132:CDS |
| ACAGGGTCCGGAGTATGGAA+GGG | 0.658271 | 7.1:-42339505 | MS.gene65132:CDS |
| ACTACGTTGTGAATAACCCA+AGG | 0.658695 | 7.1:-42340791 | MS.gene65132:CDS |
| GAATTATTACGTATCAACCA+TGG | 0.659930 | 7.1:+42343759 | None:intergenic |
| CTCTTGAACACAATCCACAA+TGG | 0.663084 | 7.1:+42340708 | None:intergenic |
| TGGACAGGTGACAAAGAGGG+TGG | 0.664985 | 7.1:-42339530 | MS.gene65132:intron |
| GAACCCACAATTAACAGCCA+AGG | 0.665968 | 7.1:-42339687 | MS.gene65132:CDS |
| GAATATTGCAGATGTAGACA+CGG | 0.668694 | 7.1:-42339774 | MS.gene65132:intron |
| GTTATTGGAAACGGTAATGG+CGG | 0.672422 | 7.1:+42340365 | None:intergenic |
| AATATTGCAGATGTAGACAC+GGG | 0.684120 | 7.1:-42339773 | MS.gene65132:intron |
| ATGTGGACAGGTGACAAAGA+GGG | 0.696684 | 7.1:-42339533 | MS.gene65132:intron |
| CGAACCATAGCATTCCCAGT+CGG | 0.703490 | 7.1:+42340528 | None:intergenic |
| GCATGCAGTTGATAATCCTG+AGG | 0.704437 | 7.1:-42343791 | MS.gene65132:CDS |
| GACACCGTGGATGATGACAT+TGG | 0.710129 | 7.1:+42340569 | None:intergenic |
| GATGTGGACAGGTGACAAAG+AGG | 0.712511 | 7.1:-42339534 | MS.gene65132:intron |
| TATAGTCATTGTTTACCACG+TGG | 0.716427 | 7.1:+42339745 | None:intergenic |
| AATCATGGATATGGACACCG+TGG | 0.720630 | 7.1:+42340556 | None:intergenic |
| CTACGTTGTGAATAACCCAA+GGG | 0.727768 | 7.1:-42340790 | MS.gene65132:CDS |
| TTTGGCAAAAGGGTTCTGAG+GGG | 0.747633 | 7.1:+42339650 | None:intergenic |
| GGTGTTATTAAATGTCGCCG+GGG | 0.749848 | 7.1:-42339337 | MS.gene65132:CDS |
| GATTGTGTTCAAGAGAGACA+TGG | 0.751862 | 7.1:-42340700 | MS.gene65132:CDS |
| CTACTTCACCCACCACAACG+AGG | 0.767107 | 7.1:-42340343 | MS.gene65132:intron |
| TAGACACGGGTATTTCCACG+TGG | 0.797672 | 7.1:-42339760 | MS.gene65132:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATATTAAAAAATTAGAAA+AGG | + | chr7.1:42341678-42341697 | None:intergenic | 10.0% |
| !! | TTATAATTAATGACATTTAT+AGG | - | chr7.1:42340895-42340914 | MS.gene65132:CDS | 10.0% |
| !! | AATATATCAAGAAAATGTTA+TGG | + | chr7.1:42342250-42342269 | None:intergenic | 15.0% |
| !! | ATCTAAATCTATCAATAAAA+AGG | + | chr7.1:42341484-42341503 | None:intergenic | 15.0% |
| !! | TGATAAACTTTACTAAATAT+TGG | - | chr7.1:42344211-42344230 | MS.gene65132:intron | 15.0% |
| !! | TTTAGATAAAAAAATTGAGT+TGG | - | chr7.1:42340198-42340217 | MS.gene65132:intron | 15.0% |
| !!! | AACATTTTCTTGATATATTT+TGG | - | chr7.1:42342251-42342270 | MS.gene65132:intron | 15.0% |
| !!! | ACCATAATTTTCTTTATTTT+CGG | + | chr7.1:42340614-42340633 | None:intergenic | 15.0% |
| !!! | AGTATAACTTCTAAAATTAT+TGG | - | chr7.1:42342692-42342711 | MS.gene65132:intron | 15.0% |
| !!! | ATACTTGTTAAATTTTAAAC+AGG | - | chr7.1:42342789-42342808 | MS.gene65132:intron | 15.0% |
| !!! | TAACTTCTAAAATTTTTAGT+AGG | - | chr7.1:42342020-42342039 | MS.gene65132:intron | 15.0% |
| !!! | TATTTTGTAAGGATTAAAAT+CGG | - | chr7.1:42339695-42339714 | MS.gene65132:CDS | 15.0% |
| !!! | TTAGTACTAGTATTTATTTT+GGG | - | chr7.1:42343778-42343797 | MS.gene65132:CDS | 15.0% |
| !!! | TTATTTTTTTTCCTTTTTGA+AGG | - | chr7.1:42343744-42343763 | MS.gene65132:intron | 15.0% |
| !!! | TTTAGTACTAGTATTTATTT+TGG | - | chr7.1:42343777-42343796 | MS.gene65132:CDS | 15.0% |
| !! | AAATATTGGAAAATTTGATG+TGG | - | chr7.1:42344225-42344244 | MS.gene65132:intron | 20.0% |
| !! | ATAAATACTAGTACTAAAAC+TGG | + | chr7.1:42343775-42343794 | None:intergenic | 20.0% |
| !! | CAAAGAATATACATCAAATA+GGG | + | chr7.1:42341077-42341096 | None:intergenic | 20.0% |
| !! | GATTCACAACAAATTATAAA+TGG | + | chr7.1:42340559-42340578 | None:intergenic | 20.0% |
| !! | TAAAAAGGTAGTATTAGAAA+AGG | + | chr7.1:42343520-42343539 | None:intergenic | 20.0% |
| !! | TAATATATCATTCCAAAAAG+AGG | + | chr7.1:42340581-42340600 | None:intergenic | 20.0% |
| !! | TAGAGAAAATTGAAATATGA+TGG | - | chr7.1:42342430-42342449 | MS.gene65132:intron | 20.0% |
| !! | TCAAAGAATATACATCAAAT+AGG | + | chr7.1:42341078-42341097 | None:intergenic | 20.0% |
| !! | TCCGAAAATAAAGAAAATTA+TGG | - | chr7.1:42340610-42340629 | MS.gene65132:CDS | 20.0% |
| !! | TTTCAAAATAAATATCACCA+TGG | - | chr7.1:42340927-42340946 | MS.gene65132:CDS | 20.0% |
| !!! | ATAATTCTAAAAACATCATG+AGG | + | chr7.1:42341790-42341809 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTATTTTCGGAAA+TGG | + | chr7.1:42340608-42340627 | None:intergenic | 20.0% |
| !!! | CTTTTATCCTAATTTGAATT+TGG | - | chr7.1:42340120-42340139 | MS.gene65132:CDS | 20.0% |
| !!! | CTTTTTCATCAAAATTAATC+AGG | + | chr7.1:42340699-42340718 | None:intergenic | 20.0% |
| !!! | GATTTTTGTAGTATTTTGTA+AGG | - | chr7.1:42339684-42339703 | MS.gene65132:CDS | 20.0% |
| !!! | TGGTGATATTTATTTTGAAA+AGG | + | chr7.1:42340927-42340946 | None:intergenic | 20.0% |
| !!! | TGTAGTAAACAAGTTTTAAA+TGG | - | chr7.1:42340426-42340445 | MS.gene65132:CDS | 20.0% |
| !!! | TTTAAAATGACTCTAGTAAA+AGG | + | chr7.1:42341130-42341149 | None:intergenic | 20.0% |
| ! | AAAGAAAATTATGGTGAAAG+TGG | - | chr7.1:42340619-42340638 | MS.gene65132:CDS | 25.0% |
| ! | AATTGAGTTCAAAATGATAC+AGG | - | chr7.1:42343593-42343612 | MS.gene65132:intron | 25.0% |
| ! | ACAATTAGATGTGCTTAATA+TGG | - | chr7.1:42340485-42340504 | MS.gene65132:CDS | 25.0% |
| ! | ACTACAATAAATGCTAAGTT+AGG | + | chr7.1:42342411-42342430 | None:intergenic | 25.0% |
| ! | ACTCAATCTAAGCTTAATTA+TGG | - | chr7.1:42341710-42341729 | MS.gene65132:intron | 25.0% |
| ! | AGAAATAGACACAGAATTTA+TGG | + | chr7.1:42343958-42343977 | None:intergenic | 25.0% |
| ! | AGGTATAAAAAGACAAACAA+GGG | + | chr7.1:42341822-42341841 | None:intergenic | 25.0% |
| ! | AGTCTAATCAGAAATTTATG+TGG | + | chr7.1:42341846-42341865 | None:intergenic | 25.0% |
| ! | ATGAGAAGTCTACTAAAATT+GGG | - | chr7.1:42343836-42343855 | MS.gene65132:intron | 25.0% |
| ! | ATTATTAACTTCCTGAATCT+TGG | + | chr7.1:42342335-42342354 | None:intergenic | 25.0% |
| ! | ATTATTATTGATGTCTGATG+AGG | + | chr7.1:42342547-42342566 | None:intergenic | 25.0% |
| ! | CTACAATAAATGCTAAGTTA+GGG | + | chr7.1:42342410-42342429 | None:intergenic | 25.0% |
| ! | GAAATTTATTATGACCGAAA+TGG | + | chr7.1:42341331-42341350 | None:intergenic | 25.0% |
| ! | GTCTAATCAGAAATTTATGT+GGG | + | chr7.1:42341845-42341864 | None:intergenic | 25.0% |
| ! | TAAATATCACCATGGAAAAA+CGG | - | chr7.1:42340935-42340954 | MS.gene65132:CDS | 25.0% |
| ! | TAACGTTCCAAATTCAAATT+AGG | + | chr7.1:42340130-42340149 | None:intergenic | 25.0% |
| ! | TACAATAAATGCTAAGTTAG+GGG | + | chr7.1:42342409-42342428 | None:intergenic | 25.0% |
| ! | TCGTTTAGTGATGATTTAAA+CGG | - | chr7.1:42339902-42339921 | MS.gene65132:intron | 25.0% |
| ! | TGGTCATTTAATAAGTTCAT+GGG | + | chr7.1:42342315-42342334 | None:intergenic | 25.0% |
| ! | TTACTTAAGATAATGAAGGA+GGG | + | chr7.1:42343472-42343491 | None:intergenic | 25.0% |
| ! | TTATTAAATGACCAAGATTC+AGG | - | chr7.1:42342321-42342340 | MS.gene65132:intron | 25.0% |
| ! | TTATTATTGATGTCTGATGA+GGG | + | chr7.1:42342546-42342565 | None:intergenic | 25.0% |
| ! | TTCTTAGCTAATGAAATATG+TGG | - | chr7.1:42344174-42344193 | MS.gene65132:CDS | 25.0% |
| ! | TTGGTCATTTAATAAGTTCA+TGG | + | chr7.1:42342316-42342335 | None:intergenic | 25.0% |
| ! | TTGTAGTAAAACAGAATCAA+CGG | + | chr7.1:42339855-42339874 | None:intergenic | 25.0% |
| ! | TTTAGAAGTTATACTGCTAA+GGG | + | chr7.1:42342687-42342706 | None:intergenic | 25.0% |
| !! | GAAGAGTGATTTACTAATTT+TGG | + | chr7.1:42341934-42341953 | None:intergenic | 25.0% |
| !! | GTAAAAGCAATTTTCAGATA+AGG | + | chr7.1:42341375-42341394 | None:intergenic | 25.0% |
| !! | GTTGTTACTTAAGATAATGA+AGG | + | chr7.1:42343476-42343495 | None:intergenic | 25.0% |
| !! | TTTTCTGTTCAATTCAACAT+TGG | + | chr7.1:42342770-42342789 | None:intergenic | 25.0% |
| !!! | AATTTTGATGAAAAAGTGAG+TGG | - | chr7.1:42340703-42340722 | MS.gene65132:CDS | 25.0% |
| !!! | ATTTTGATGAAAAAGTGAGT+GGG | - | chr7.1:42340704-42340723 | MS.gene65132:CDS | 25.0% |
| !!! | GTAAACAAGTTTTAAATGGT+AGG | - | chr7.1:42340430-42340449 | MS.gene65132:CDS | 25.0% |
| !!! | TTTTAGAAGTTATACTGCTA+AGG | + | chr7.1:42342688-42342707 | None:intergenic | 25.0% |
| !!! | TTTTCTTGATATATTTTGGC+TGG | - | chr7.1:42342255-42342274 | MS.gene65132:intron | 25.0% |
| AAAAAGCTCCATTTAGCAAA+AGG | + | chr7.1:42344320-42344339 | None:intergenic | 30.0% | |
| AAACAATGACTATACACACT+GGG | - | chr7.1:42344039-42344058 | MS.gene65132:intron | 30.0% | |
| AAATACAAACTAAAGCCAAG+TGG | + | chr7.1:42340407-42340426 | None:intergenic | 30.0% | |
| AAATTACCCGTTTGTCTTAA+AGG | + | chr7.1:42342630-42342649 | None:intergenic | 30.0% | |
| AAGCTTAGATTGAGTAGAAA+GGG | + | chr7.1:42341705-42341724 | None:intergenic | 30.0% | |
| AATACAAACTAAAGCCAAGT+GGG | + | chr7.1:42340406-42340425 | None:intergenic | 30.0% | |
| ACCAACTAAAGAAGATGATT+TGG | + | chr7.1:42344400-42344419 | None:intergenic | 30.0% | |
| ACCACTATACAAGAAATGAA+AGG | + | chr7.1:42341539-42341558 | None:intergenic | 30.0% | |
| ACGATTTCTAACTTTCTTGA+CGG | + | chr7.1:42340963-42340982 | None:intergenic | 30.0% | |
| AGCTGGCAAATAAAATATTC+TGG | + | chr7.1:42341279-42341298 | None:intergenic | 30.0% | |
| ATAGAATGATACGGTGTATA+CGG | + | chr7.1:42342477-42342496 | None:intergenic | 30.0% | |
| ATCTAAGCTTAATTATGGCT+AGG | - | chr7.1:42341715-42341734 | MS.gene65132:intron | 30.0% | |
| CATAAATCTTACACGTTACA+GGG | - | chr7.1:42341888-42341907 | MS.gene65132:intron | 30.0% | |
| CATGAGAAGTCTACTAAAAT+TGG | - | chr7.1:42343835-42343854 | MS.gene65132:intron | 30.0% | |
| CATTTAATTGATCATGTGCA+TGG | - | chr7.1:42340275-42340294 | MS.gene65132:intron | 30.0% | |
| CCACTATACAAGAAATGAAA+GGG | + | chr7.1:42341538-42341557 | None:intergenic | 30.0% | |
| CTTGAATAATTCATCAATGG+CGG | - | chr7.1:42339605-42339624 | MS.gene65132:intron | 30.0% | |
| GAATTATTACGTATCAACCA+TGG | + | chr7.1:42340019-42340038 | None:intergenic | 30.0% | |
| GAGCTTGAATAATTCATCAA+TGG | - | chr7.1:42339602-42339621 | MS.gene65132:intron | 30.0% | |
| GAGGTATAAAAAGACAAACA+AGG | + | chr7.1:42341823-42341842 | None:intergenic | 30.0% | |
| GAGTTGCAGATGATATTTAT+TGG | - | chr7.1:42340165-42340184 | MS.gene65132:intron | 30.0% | |
| GGTCATTTAATAAGTTCATG+GGG | + | chr7.1:42342314-42342333 | None:intergenic | 30.0% | |
| GTCATTTAATAAGTTCATGG+GGG | + | chr7.1:42342313-42342332 | None:intergenic | 30.0% | |
| GTTACTTAAGATAATGAAGG+AGG | + | chr7.1:42343473-42343492 | None:intergenic | 30.0% | |
| TAAACAATGACTATACACAC+TGG | - | chr7.1:42344038-42344057 | MS.gene65132:intron | 30.0% | |
| TAAGCTTAGATTGAGTAGAA+AGG | + | chr7.1:42341706-42341725 | None:intergenic | 30.0% | |
| TAATCAGAAATTTATGTGGG+AGG | + | chr7.1:42341842-42341861 | None:intergenic | 30.0% | |
| TCTAAGCTTAATTATGGCTA+GGG | - | chr7.1:42341716-42341735 | MS.gene65132:intron | 30.0% | |
| TGCAGATAATTCTAATCCAA+CGG | + | chr7.1:42339751-42339770 | None:intergenic | 30.0% | |
| TTGTAAGAATGTTACCTCTT+TGG | + | chr7.1:42344146-42344165 | None:intergenic | 30.0% | |
| TTTATTATGACCGAAATGGT+CGG | + | chr7.1:42341327-42341346 | None:intergenic | 30.0% | |
| ! | AGTCATGAAGATTGGATTTT+AGG | + | chr7.1:42341425-42341444 | None:intergenic | 30.0% |
| ! | GTATTTTCTTCCTCTGTTTT+TGG | - | chr7.1:42340312-42340331 | MS.gene65132:intron | 30.0% |
| ! | TCAGTCAGATGCATAAATTT+TGG | + | chr7.1:42340856-42340875 | None:intergenic | 30.0% |
| ! | TCTATTTCTTGCACTAACAA+TGG | - | chr7.1:42343969-42343988 | MS.gene65132:intron | 30.0% |
| ! | TGCATTTTCAGCTTAAGTAA+TGG | - | chr7.1:42339949-42339968 | MS.gene65132:intron | 30.0% |
| !! | AAACTACAAAGGTATTCATG+TGG | + | chr7.1:42342188-42342207 | None:intergenic | 30.0% |
| !! | ATTCAGTCCTTTAAGACAAA+CGG | - | chr7.1:42342620-42342639 | MS.gene65132:intron | 30.0% |
| !! | TTTGTTGTGAATCCTCTTTT+TGG | - | chr7.1:42340566-42340585 | MS.gene65132:CDS | 30.0% |
| !!! | AGTTTGAGTTTTTTCTCATG+TGG | - | chr7.1:42342839-42342858 | MS.gene65132:intron | 30.0% |
| !!! | GTTTGAGTTTTTTCTCATGT+GGG | - | chr7.1:42342840-42342859 | MS.gene65132:intron | 30.0% |
| AAAAAAATGCTACTGCAGTG+TGG | + | chr7.1:42341022-42341041 | None:intergenic | 35.0% | |
| AAATCGTGTGAGTAATTGCA+TGG | - | chr7.1:42340976-42340995 | MS.gene65132:intron | 35.0% | |
| AACAGTTTCAAGACCATAGA+TGG | - | chr7.1:42343127-42343146 | MS.gene65132:intron | 35.0% | |
| AATAGTAATGCATGCTCCAA+AGG | + | chr7.1:42343176-42343195 | None:intergenic | 35.0% | |
| AATATGACTGGAACCAAAGA+TGG | + | chr7.1:42343326-42343345 | None:intergenic | 35.0% | |
| AATATTGCAGATGTAGACAC+GGG | - | chr7.1:42344002-42344021 | MS.gene65132:intron | 35.0% | |
| AATCGTGTGAGTAATTGCAT+GGG | - | chr7.1:42340977-42340996 | MS.gene65132:intron | 35.0% | |
| AATGTTACCTCTTTGGCAAA+AGG | + | chr7.1:42344139-42344158 | None:intergenic | 35.0% | |
| AATGTTACTGCTAGTTACCT+TGG | + | chr7.1:42343717-42343736 | None:intergenic | 35.0% | |
| ACTTCTCATGTCAAATAGAG+AGG | + | chr7.1:42343825-42343844 | None:intergenic | 35.0% | |
| AGGATACGGATAGAATGATA+CGG | + | chr7.1:42342486-42342505 | None:intergenic | 35.0% | |
| ATAAAGGAGTAGATAACCGT+TGG | - | chr7.1:42339732-42339751 | MS.gene65132:CDS | 35.0% | |
| ATCACTCTTCAGTAGTCAAA+AGG | - | chr7.1:42341944-42341963 | MS.gene65132:intron | 35.0% | |
| ATGACAACTAGACCTCTTTA+TGG | - | chr7.1:42343864-42343883 | MS.gene65132:intron | 35.0% | |
| ATGTTACCTCTTTGGCAAAA+GGG | + | chr7.1:42344138-42344157 | None:intergenic | 35.0% | |
| ATTAATCAGGCAGACACAAA+AGG | + | chr7.1:42340686-42340705 | None:intergenic | 35.0% | |
| CATGATCAATTCTTGCTTCA+GGG | + | chr7.1:42343107-42343126 | None:intergenic | 35.0% | |
| CCATAAATCTTACACGTTAC+AGG | - | chr7.1:42341887-42341906 | MS.gene65132:intron | 35.0% | |
| CCCTTTCATTTCTTGTATAG+TGG | - | chr7.1:42341535-42341554 | MS.gene65132:intron | 35.0% | |
| CCTGTAACGTGTAAGATTTA+TGG | + | chr7.1:42341890-42341909 | None:intergenic | 35.0% | |
| CTAAGCTTAATTATGGCTAG+GGG | - | chr7.1:42341717-42341736 | MS.gene65132:intron | 35.0% | |
| CTATTGATCATAACGACTCA+AGG | - | chr7.1:42339397-42339416 | MS.gene65132:CDS | 35.0% | |
| GAATATTGCAGATGTAGACA+CGG | - | chr7.1:42344001-42344020 | MS.gene65132:intron | 35.0% | |
| GCATGAATTCCTAATAGTCT+GGG | + | chr7.1:42342127-42342146 | None:intergenic | 35.0% | |
| GCCAAATCATCTTCTTTAGT+TGG | - | chr7.1:42344396-42344415 | MS.gene65132:CDS | 35.0% | |
| GGTGAAGTAGTTATTGGAAA+CGG | + | chr7.1:42343422-42343441 | None:intergenic | 35.0% | |
| GTAGTTATTGGAAACGGTAA+TGG | + | chr7.1:42343416-42343435 | None:intergenic | 35.0% | |
| GTCGTTATGATCAATAGCAT+TGG | + | chr7.1:42339394-42339413 | None:intergenic | 35.0% | |
| GTGATTGAAGTCATGAAGAT+TGG | + | chr7.1:42341433-42341452 | None:intergenic | 35.0% | |
| GTTCATAAACCCAGACTATT+AGG | - | chr7.1:42342115-42342134 | MS.gene65132:intron | 35.0% | |
| TACTGCAGTGTGGTAATAAA+TGG | + | chr7.1:42341012-42341031 | None:intergenic | 35.0% | |
| TACTTTCTCCTATGTTTCTC+TGG | - | chr7.1:42341600-42341619 | MS.gene65132:intron | 35.0% | |
| TATAGTCATTGTTTACCACG+TGG | + | chr7.1:42344033-42344052 | None:intergenic | 35.0% | |
| TCACTCTTCAGTAGTCAAAA+GGG | - | chr7.1:42341945-42341964 | MS.gene65132:intron | 35.0% | |
| TCATGATCAATTCTTGCTTC+AGG | + | chr7.1:42343108-42343127 | None:intergenic | 35.0% | |
| TCCAAAGGCAATATGAACAT+TGG | + | chr7.1:42343161-42343180 | None:intergenic | 35.0% | |
| TGCATGAATTCCTAATAGTC+TGG | + | chr7.1:42342128-42342147 | None:intergenic | 35.0% | |
| TGGGTCAACAATTAAGGATA+CGG | + | chr7.1:42342500-42342519 | None:intergenic | 35.0% | |
| TTCGTAAACCAGAGAAACAT+AGG | + | chr7.1:42341611-42341630 | None:intergenic | 35.0% | |
| TTCTCAAAAGCCAAAAACAG+AGG | + | chr7.1:42340325-42340344 | None:intergenic | 35.0% | |
| TTGGAAAATTTGATGTGGAC+AGG | - | chr7.1:42344230-42344249 | MS.gene65132:intron | 35.0% | |
| ! | AACACTCTTTAGAAGAACAG+AGG | + | chr7.1:42343921-42343940 | None:intergenic | 35.0% |
| ! | ACCATTGCATACAACCATTT+TGG | - | chr7.1:42343669-42343688 | MS.gene65132:intron | 35.0% |
| ! | ATAATTCATCAATGGCGGAA+AGG | - | chr7.1:42339610-42339629 | MS.gene65132:intron | 35.0% |
| ! | CATGATGATAGTGTTGTGAA+TGG | - | chr7.1:42339558-42339577 | MS.gene65132:intron | 35.0% |
| ! | CATTGCATACAACCATTTTG+GGG | - | chr7.1:42343671-42343690 | MS.gene65132:intron | 35.0% |
| ! | CCATTGCATACAACCATTTT+GGG | - | chr7.1:42343670-42343689 | MS.gene65132:intron | 35.0% |
| ! | GATTGATTCATTAAGCACCA+TGG | + | chr7.1:42341217-42341236 | None:intergenic | 35.0% |
| ! | GGGTTTATGAACTCTGTTTT+TGG | + | chr7.1:42342107-42342126 | None:intergenic | 35.0% |
| ! | TCTTTGGTTCCAGTCATATT+TGG | - | chr7.1:42343326-42343345 | MS.gene65132:intron | 35.0% |
| ! | TGTGTGTTACTGATTACCTT+GGG | - | chr7.1:42342056-42342075 | MS.gene65132:intron | 35.0% |
| ! | TTAGTTGGTACTTTAACTGC+AGG | - | chr7.1:42344411-42344430 | MS.gene65132:CDS | 35.0% |
| ! | TTGTGTGTTACTGATTACCT+TGG | - | chr7.1:42342055-42342074 | MS.gene65132:intron | 35.0% |
| !! | AAGAAGTGTTATAGCGAGAA+TGG | + | chr7.1:42339361-42339380 | None:intergenic | 35.0% |
| !! | GGTCTTGTTGATGCTATTAT+GGG | - | chr7.1:42343382-42343401 | MS.gene65132:intron | 35.0% |
| !! | TGGTCTTGTTGATGCTATTA+TGG | - | chr7.1:42343381-42343400 | MS.gene65132:intron | 35.0% |
| !! | TTCAGTCCTTTAAGACAAAC+GGG | - | chr7.1:42342621-42342640 | MS.gene65132:intron | 35.0% |
| !!! | ACTCTGTTTTTGGTTCTTTC+AGG | + | chr7.1:42342097-42342116 | None:intergenic | 35.0% |
| !!! | TGTTTTTGGCTTTTGAGAAG+AGG | - | chr7.1:42340326-42340345 | MS.gene65132:intron | 35.0% |
| ACAGGCTGTAGAAACTACAA+AGG | + | chr7.1:42342199-42342218 | None:intergenic | 40.0% | |
| ACATTAGCATGTGGTTAAGC+TGG | + | chr7.1:42341296-42341315 | None:intergenic | 40.0% | |
| ACTACGTTGTGAATAACCCA+AGG | - | chr7.1:42342984-42343003 | MS.gene65132:intron | 40.0% | |
| AGTCTCAATTTACCTCGTTG+TGG | + | chr7.1:42343447-42343466 | None:intergenic | 40.0% | |
| AGTTGGAATGGACCATAAAG+AGG | + | chr7.1:42343879-42343898 | None:intergenic | 40.0% | |
| ATCACAATGCAACCGCTAAT+GGG | + | chr7.1:42340512-42340531 | None:intergenic | 40.0% | |
| ATCACCAATGTCATCATCCA+CGG | - | chr7.1:42343202-42343221 | MS.gene65132:intron | 40.0% | |
| ATCGCCATGTTCTTTGCATA+TGG | - | chr7.1:42341234-42341253 | MS.gene65132:intron | 40.0% | |
| ATGCTAGAGCCTCAAGTTTA+GGG | - | chr7.1:42344373-42344392 | MS.gene65132:intron | 40.0% | |
| CAATGGCCTATCTTGAATGA+CGG | + | chr7.1:42343053-42343072 | None:intergenic | 40.0% | |
| CATTGTCCTCCATCCAAAAT+GGG | + | chr7.1:42343284-42343303 | None:intergenic | 40.0% | |
| CCAAGACATGTGTTTAACAG+GGG | + | chr7.1:42341562-42341581 | None:intergenic | 40.0% | |
| CCCAAAATGGTTGTATGCAA+TGG | + | chr7.1:42343673-42343692 | None:intergenic | 40.0% | |
| CTACGTTGTGAATAACCCAA+GGG | - | chr7.1:42342985-42343004 | MS.gene65132:intron | 40.0% | |
| CTCTTGAACACAATCCACAA+TGG | + | chr7.1:42343070-42343089 | None:intergenic | 40.0% | |
| CTGTTAAACACATGTCTTGG+CGG | - | chr7.1:42341562-42341581 | MS.gene65132:intron | 40.0% | |
| GATCCCATATGCAAAGAACA+TGG | + | chr7.1:42341241-42341260 | None:intergenic | 40.0% | |
| GATCTCAGAACATTAGCATG+TGG | + | chr7.1:42341305-42341324 | None:intergenic | 40.0% | |
| GATTCATTAAGCACCATGGA+AGG | + | chr7.1:42341213-42341232 | None:intergenic | 40.0% | |
| GATTGTGTTCAAGAGAGACA+TGG | - | chr7.1:42343075-42343094 | MS.gene65132:intron | 40.0% | |
| GCAAACAGTACTATTTGCGT+CGG | - | chr7.1:42339804-42339823 | MS.gene65132:intron | 40.0% | |
| GCAGTGTGGTAATAAATGGT+GGG | + | chr7.1:42341008-42341027 | None:intergenic | 40.0% | |
| GCCAAGACATGTGTTTAACA+GGG | + | chr7.1:42341563-42341582 | None:intergenic | 40.0% | |
| GCCAATGTTCATATTGCCTT+TGG | - | chr7.1:42343157-42343176 | MS.gene65132:intron | 40.0% | |
| GCTTAATATGGTCCCATTAG+CGG | - | chr7.1:42340497-42340516 | MS.gene65132:CDS | 40.0% | |
| GTAAGTGATCAAGAAACCCA+AGG | + | chr7.1:42342075-42342094 | None:intergenic | 40.0% | |
| GTCATGTGGGTCAACAATTA+AGG | + | chr7.1:42342506-42342525 | None:intergenic | 40.0% | |
| GTGGTCAATCCAAATATGAC+TGG | + | chr7.1:42343338-42343357 | None:intergenic | 40.0% | |
| TATGCTAGAGCCTCAAGTTT+AGG | - | chr7.1:42344372-42344391 | MS.gene65132:intron | 40.0% | |
| TCAATTTACCTCGTTGTGGT+GGG | + | chr7.1:42343443-42343462 | None:intergenic | 40.0% | |
| TCATTCAAGATAGGCCATTG+TGG | - | chr7.1:42343053-42343072 | MS.gene65132:intron | 40.0% | |
| TCGCCATGTTCTTTGCATAT+GGG | - | chr7.1:42341235-42341254 | MS.gene65132:intron | 40.0% | |
| TCGGCTTACAATCATGGATA+TGG | + | chr7.1:42343231-42343250 | None:intergenic | 40.0% | |
| TGCAGTGTGGTAATAAATGG+TGG | + | chr7.1:42341009-42341028 | None:intergenic | 40.0% | |
| TTGCCTTGGCTGTTAATTGT+GGG | + | chr7.1:42344094-42344113 | None:intergenic | 40.0% | |
| ! | GTTATTGGAAACGGTAATGG+CGG | + | chr7.1:42343413-42343432 | None:intergenic | 40.0% |
| ! | TTTTTCACTCCATCAGGAAG+AGG | - | chr7.1:42344336-42344355 | MS.gene65132:intron | 40.0% |
| !! | AGTTAGGGGAGATCTAGTTT+TGG | + | chr7.1:42342395-42342414 | None:intergenic | 40.0% |
| !! | CTGGTGTTATTAAATGTCGC+CGG | - | chr7.1:42344436-42344455 | MS.gene65132:CDS | 40.0% |
| !! | TGGTGTTATTAAATGTCGCC+GGG | - | chr7.1:42344437-42344456 | MS.gene65132:CDS | 40.0% |
| !!! | AGTTTTTTCTCATGTGGGAC+TGG | - | chr7.1:42342845-42342864 | MS.gene65132:intron | 40.0% |
| !!! | GTTAGGGGAGATCTAGTTTT+GGG | + | chr7.1:42342394-42342413 | None:intergenic | 40.0% |
| !!! | TTAGGGGAGATCTAGTTTTG+GGG | + | chr7.1:42342393-42342412 | None:intergenic | 40.0% |
| AACTGGACGCTCCTTCAAAA+AGG | + | chr7.1:42343758-42343777 | None:intergenic | 45.0% | |
| AATCATGGATATGGACACCG+TGG | + | chr7.1:42343222-42343241 | None:intergenic | 45.0% | |
| ACGGTGTATACGGAATAACG+AGG | + | chr7.1:42342467-42342486 | None:intergenic | 45.0% | |
| ATCCATGATTGTAAGCCGAC+TGG | - | chr7.1:42343232-42343251 | MS.gene65132:intron | 45.0% | |
| ATGTGGACAGGTGACAAAGA+GGG | - | chr7.1:42344242-42344261 | MS.gene65132:intron | 45.0% | |
| ATGTGGGACTGGAAATCCAA+TGG | - | chr7.1:42342856-42342875 | MS.gene65132:intron | 45.0% | |
| ATTCCAACCCTTCCATACTC+CGG | + | chr7.1:42344280-42344299 | None:intergenic | 45.0% | |
| CAAATAGAGAGGCTCAGCTT+AGG | + | chr7.1:42343814-42343833 | None:intergenic | 45.0% | |
| CAACTTCCTAGTGTCTCAGA+GGG | - | chr7.1:42343894-42343913 | MS.gene65132:intron | 45.0% | |
| CACTGGGTGATGTATGCTAT+TGG | - | chr7.1:42344055-42344074 | MS.gene65132:intron | 45.0% | |
| CAGGACTATACGCAATCACA+CGG | - | chr7.1:42342808-42342827 | MS.gene65132:intron | 45.0% | |
| CCATTGTCCTCCATCCAAAA+TGG | + | chr7.1:42343285-42343304 | None:intergenic | 45.0% | |
| CCCCTGTTAAACACATGTCT+TGG | - | chr7.1:42341559-42341578 | MS.gene65132:intron | 45.0% | |
| CGCAATTAGACAGAGAGTTG+TGG | + | chr7.1:42343357-42343376 | None:intergenic | 45.0% | |
| CGCCAAGACATGTGTTTAAC+AGG | + | chr7.1:42341564-42341583 | None:intergenic | 45.0% | |
| CGGTGTATACGGAATAACGA+GGG | + | chr7.1:42342466-42342485 | None:intergenic | 45.0% | |
| CTACAAGCACAATGCATCTC+TGG | - | chr7.1:42342219-42342238 | MS.gene65132:intron | 45.0% | |
| CTAGTTACCTTGGCATCCTT+TGG | + | chr7.1:42343707-42343726 | None:intergenic | 45.0% | |
| CTCAATTTACCTCGTTGTGG+TGG | + | chr7.1:42343444-42343463 | None:intergenic | 45.0% | |
| CTGCATGAGATAGCTCAGAA+TGG | - | chr7.1:42339766-42339785 | MS.gene65132:CDS | 45.0% | |
| GAAATCCAATGGATGACTGC+TGG | - | chr7.1:42342867-42342886 | MS.gene65132:intron | 45.0% | |
| GAACCCACAATTAACAGCCA+AGG | - | chr7.1:42344088-42344107 | MS.gene65132:intron | 45.0% | |
| GAGACACTAGGAAGTTGGAA+TGG | + | chr7.1:42343891-42343910 | None:intergenic | 45.0% | |
| GAGTATGGAAGGGTTGGAAT+TGG | - | chr7.1:42344280-42344299 | MS.gene65132:intron | 45.0% | |
| GATCACAATGCAACCGCTAA+TGG | + | chr7.1:42340513-42340532 | None:intergenic | 45.0% | |
| GATGCATTGTGCTTGTAGAC+AGG | + | chr7.1:42342217-42342236 | None:intergenic | 45.0% | |
| GGGACACATTTCAGCATTCA+GGG | - | chr7.1:42341737-42341756 | MS.gene65132:intron | 45.0% | |
| GTATACGGAATAACGAGGGT+TGG | + | chr7.1:42342462-42342481 | None:intergenic | 45.0% | |
| GTCTTATCCAAAGGATGCCA+AGG | - | chr7.1:42343697-42343716 | MS.gene65132:intron | 45.0% | |
| GTGTGAGTAATTGCATGGGT+AGG | - | chr7.1:42340981-42341000 | MS.gene65132:intron | 45.0% | |
| GTTGCCTTGGCTGTTAATTG+TGG | + | chr7.1:42344095-42344114 | None:intergenic | 45.0% | |
| TATCTTGAATGACGGCGTGA+CGG | + | chr7.1:42343045-42343064 | None:intergenic | 45.0% | |
| TATGGAAGGGTTGGAATTGG+AGG | - | chr7.1:42344283-42344302 | MS.gene65132:intron | 45.0% | |
| TCCATGATTGTAAGCCGACT+GGG | - | chr7.1:42343233-42343252 | MS.gene65132:intron | 45.0% | |
| TCCTCCATCCAAAATGGGAA+GGG | + | chr7.1:42343279-42343298 | None:intergenic | 45.0% | |
| TCTCTGTCTAATTGCGCTGA+TGG | - | chr7.1:42343361-42343380 | MS.gene65132:intron | 45.0% | |
| TCTTTGGCAAAAGGGTTCTG+AGG | + | chr7.1:42344130-42344149 | None:intergenic | 45.0% | |
| TGACAAAGAGGGTGGATACA+GGG | - | chr7.1:42344253-42344272 | MS.gene65132:intron | 45.0% | |
| TGCTAGAGCCTCAAGTTTAG+GGG | - | chr7.1:42344374-42344393 | MS.gene65132:intron | 45.0% | |
| TGGGTGATGTATGCTATTGG+AGG | - | chr7.1:42344058-42344077 | MS.gene65132:intron | 45.0% | |
| TTAAAATCGGAGCGTACACG+TGG | - | chr7.1:42339708-42339727 | MS.gene65132:CDS | 45.0% | |
| TTCAAGACCATAGATGGTCG+TGG | - | chr7.1:42343133-42343152 | MS.gene65132:intron | 45.0% | |
| ! | ACTATTTGCGTCGGTCAGAT+CGG | - | chr7.1:42339813-42339832 | MS.gene65132:intron | 45.0% |
| ! | CCATTTTGGATGGAGGACAA+TGG | - | chr7.1:42343282-42343301 | MS.gene65132:intron | 45.0% |
| ! | CTTTGGCAAAAGGGTTCTGA+GGG | + | chr7.1:42344129-42344148 | None:intergenic | 45.0% |
| ! | GAGGGAGACCTTTTGCTAAA+TGG | - | chr7.1:42344309-42344328 | MS.gene65132:intron | 45.0% |
| ! | GGTGATGGCATTTCCATCTT+TGG | - | chr7.1:42343310-42343329 | MS.gene65132:intron | 45.0% |
| ! | TCAGAACCCTTTTGCCAAAG+AGG | - | chr7.1:42344129-42344148 | MS.gene65132:intron | 45.0% |
| ! | TGATTTGGCCCCTAAACTTG+AGG | + | chr7.1:42344385-42344404 | None:intergenic | 45.0% |
| !! | CGTTCTGAAGTTTCCTTCCA+TGG | - | chr7.1:42341197-42341216 | MS.gene65132:intron | 45.0% |
| !! | GCATACAACCATTTTGGGGA+GGG | - | chr7.1:42343675-42343694 | MS.gene65132:intron | 45.0% |
| !! | GCATGCAGTTGATAATCCTG+AGG | - | chr7.1:42339984-42340003 | MS.gene65132:intron | 45.0% |
| !! | GGTGTTATTAAATGTCGCCG+GGG | - | chr7.1:42344438-42344457 | MS.gene65132:CDS | 45.0% |
| !! | GTGGTGGGTGAAGTAGTTAT+TGG | + | chr7.1:42343428-42343447 | None:intergenic | 45.0% |
| !! | GTTCTGAGATCCGACCATTT+CGG | - | chr7.1:42341314-42341333 | MS.gene65132:intron | 45.0% |
| !! | TGCATACAACCATTTTGGGG+AGG | - | chr7.1:42343674-42343693 | MS.gene65132:intron | 45.0% |
| !! | TTTGGCAAAAGGGTTCTGAG+GGG | + | chr7.1:42344128-42344147 | None:intergenic | 45.0% |
| !!! | GAGATCTAGTTTTGGGGTGT+CGG | + | chr7.1:42342387-42342406 | None:intergenic | 45.0% |
| !!! | GCTGATTGTGCCATTGGTTT+TGG | - | chr7.1:42342929-42342948 | MS.gene65132:intron | 45.0% |
| !!! | GGAGCTTTTTTCACTCCATC+AGG | - | chr7.1:42344330-42344349 | MS.gene65132:intron | 45.0% |
| !! | ATACAATAAATTATAATTAT+TGG | - | chr7.1:42341635-42341654 | MS.gene65132:intron | 5.0% |
| !! | TACAATAAATTATAATTATT+GGG | - | chr7.1:42341636-42341655 | MS.gene65132:intron | 5.0% |
| !! | TGATATAAAATTAATTAAAA+AGG | + | chr7.1:42343535-42343554 | None:intergenic | 5.0% |
| !!! | TAATTATAATTTTAATGAAA+TGG | + | chr7.1:42340884-42340903 | None:intergenic | 5.0% |
| ACCATGGAAGCAATCTCCTC+AGG | + | chr7.1:42340003-42340022 | None:intergenic | 50.0% | |
| ATTGGCACCACGACCATCTA+TGG | + | chr7.1:42343143-42343162 | None:intergenic | 50.0% | |
| CACAATCAGCCAACCGCTTT+CGG | + | chr7.1:42342919-42342938 | None:intergenic | 50.0% | |
| CACATGTCTTGGCGGAGATT+TGG | - | chr7.1:42341570-42341589 | MS.gene65132:intron | 50.0% | |
| CCAACTTCCTAGTGTCTCAG+AGG | - | chr7.1:42343893-42343912 | MS.gene65132:intron | 50.0% | |
| CCTACATCACCCAACAAGGT+GGG | - | chr7.1:42342157-42342176 | MS.gene65132:intron | 50.0% | |
| CCTCCATCCAAAATGGGAAG+GGG | + | chr7.1:42343278-42343297 | None:intergenic | 50.0% | |
| CGAACCATAGCATTCCCAGT+CGG | + | chr7.1:42343250-42343269 | None:intergenic | 50.0% | |
| CTACATCACCCAACAAGGTG+GGG | - | chr7.1:42342158-42342177 | MS.gene65132:intron | 50.0% | |
| CTGTCCTACATCACCCAACA+AGG | - | chr7.1:42342153-42342172 | MS.gene65132:intron | 50.0% | |
| GACACCGTGGATGATGACAT+TGG | + | chr7.1:42343209-42343228 | None:intergenic | 50.0% | |
| GATGTGGACAGGTGACAAAG+AGG | - | chr7.1:42344241-42344260 | MS.gene65132:intron | 50.0% | |
| GGAGCGTACACGTGGTATAA+AGG | - | chr7.1:42339716-42339735 | MS.gene65132:CDS | 50.0% | |
| GGATAAGACCCTCCCCAAAA+TGG | + | chr7.1:42343686-42343705 | None:intergenic | 50.0% | |
| GGCAGACACAAAAGGAACAG+TGG | + | chr7.1:42340678-42340697 | None:intergenic | 50.0% | |
| GGCGTTTCGACCAAAACCAA+TGG | + | chr7.1:42342942-42342961 | None:intergenic | 50.0% | |
| GGGGACACATTTCAGCATTC+AGG | - | chr7.1:42341736-42341755 | MS.gene65132:intron | 50.0% | |
| GGTACTTTAACTGCAGGTGC+TGG | - | chr7.1:42344417-42344436 | MS.gene65132:CDS | 50.0% | |
| GGTTGGAATTGGAGGTCTGA+GGG | - | chr7.1:42344291-42344310 | MS.gene65132:intron | 50.0% | |
| GTCACGCCGTCATTCAAGAT+AGG | - | chr7.1:42343044-42343063 | MS.gene65132:intron | 50.0% | |
| GTCCTCCATCCAAAATGGGA+AGG | + | chr7.1:42343280-42343299 | None:intergenic | 50.0% | |
| GTGACAAAGAGGGTGGATAC+AGG | - | chr7.1:42344252-42344271 | MS.gene65132:intron | 50.0% | |
| GTTATTAAATGTCGCCGGGG+TGG | - | chr7.1:42344441-42344460 | MS.gene65132:CDS | 50.0% | |
| TAAGCCGACTGGGAATGCTA+TGG | - | chr7.1:42343243-42343262 | MS.gene65132:intron | 50.0% | |
| TACGCAATCACACGGAGAGA+AGG | - | chr7.1:42342816-42342835 | MS.gene65132:intron | 50.0% | |
| TAGACACGGGTATTTCCACG+TGG | - | chr7.1:42344015-42344034 | MS.gene65132:intron | 50.0% | |
| TCCTACATCACCCAACAAGG+TGG | - | chr7.1:42342156-42342175 | MS.gene65132:intron | 50.0% | |
| TCCTGAGGAGATTGCTTCCA+TGG | - | chr7.1:42339999-42340018 | MS.gene65132:intron | 50.0% | |
| TGATGAGGGATGAGACTGGT+GGG | + | chr7.1:42342532-42342551 | None:intergenic | 50.0% | |
| TGTCTGATGAGGGATGAGAC+TGG | + | chr7.1:42342536-42342555 | None:intergenic | 50.0% | |
| TTTGGTACAGACGCCGAAAG+CGG | - | chr7.1:42342903-42342922 | MS.gene65132:intron | 50.0% | |
| TTTGGTCGAAACGCCATAGG+TGG | - | chr7.1:42342947-42342966 | MS.gene65132:intron | 50.0% | |
| ! | AGGACAATGGCTGATGGTGA+TGG | - | chr7.1:42343295-42343314 | MS.gene65132:intron | 50.0% |
| ! | ATTGGAAACGGTAATGGCGG+TGG | + | chr7.1:42343410-42343429 | None:intergenic | 50.0% |
| ! | TCCCAGTCGGCTTACAATCA+TGG | + | chr7.1:42343237-42343256 | None:intergenic | 50.0% |
| ! | TTGGGGAGGGTCTTATCCAA+AGG | - | chr7.1:42343688-42343707 | MS.gene65132:intron | 50.0% |
| !! | CCTCTGAGACACTAGGAAGT+TGG | + | chr7.1:42343896-42343915 | None:intergenic | 50.0% |
| !! | GGTTTTGGTCGAAACGCCAT+AGG | - | chr7.1:42342944-42342963 | MS.gene65132:intron | 50.0% |
| !!! | ATCTAGTTTTGGGGTGTCGG+TGG | + | chr7.1:42342384-42342403 | None:intergenic | 50.0% |
| !!! | TTGACGGTGCCGTTTTTCCA+TGG | + | chr7.1:42340947-42340966 | None:intergenic | 50.0% |
| AACGCCATAGGTGGTCGTGA+TGG | - | chr7.1:42342956-42342975 | MS.gene65132:intron | 55.0% | |
| AAGAGGGTGGATACAGGGTC+CGG | - | chr7.1:42344258-42344277 | MS.gene65132:intron | 55.0% | |
| ACAGGGTCCGGAGTATGGAA+GGG | - | chr7.1:42344270-42344289 | MS.gene65132:intron | 55.0% | |
| AGTGCCAGGTCTTGGGTTCA+CGG | + | chr7.1:42343020-42343039 | None:intergenic | 55.0% | |
| CCCACCTTGTTGGGTGATGT+AGG | + | chr7.1:42342160-42342179 | None:intergenic | 55.0% | |
| CCTTCCATCACGACCACCTA+TGG | + | chr7.1:42342963-42342982 | None:intergenic | 55.0% | |
| CTACTTCACCCACCACAACG+AGG | - | chr7.1:42343432-42343451 | MS.gene65132:intron | 55.0% | |
| CTGATGAGGGATGAGACTGG+TGG | + | chr7.1:42342533-42342552 | None:intergenic | 55.0% | |
| GCTGGCGCTGTGATAAGCTT+TGG | - | chr7.1:42342885-42342904 | MS.gene65132:intron | 55.0% | |
| GGATGGAGGACAATGGCTGA+TGG | - | chr7.1:42343289-42343308 | MS.gene65132:intron | 55.0% | |
| GGGTTGGAATTGGAGGTCTG+AGG | - | chr7.1:42344290-42344309 | MS.gene65132:intron | 55.0% | |
| GTGGCTTACCCCACCTTGTT+GGG | + | chr7.1:42342169-42342188 | None:intergenic | 55.0% | |
| TACAGGGTCCGGAGTATGGA+AGG | - | chr7.1:42344269-42344288 | MS.gene65132:intron | 55.0% | |
| TCAGCACAGTCTGACCCACT+TGG | - | chr7.1:42340389-42340408 | MS.gene65132:CDS | 55.0% | |
| TCCATCAGGAAGAGGAGCTG+CGG | - | chr7.1:42344344-42344363 | MS.gene65132:intron | 55.0% | |
| TGGACAGGTGACAAAGAGGG+TGG | - | chr7.1:42344245-42344264 | MS.gene65132:intron | 55.0% | |
| TGGATACAGGGTCCGGAGTA+TGG | - | chr7.1:42344265-42344284 | MS.gene65132:intron | 55.0% | |
| TGTGGCTTACCCCACCTTGT+TGG | + | chr7.1:42342170-42342189 | None:intergenic | 55.0% | |
| ! | CCATAGGTGGTCGTGATGGA+AGG | - | chr7.1:42342960-42342979 | MS.gene65132:intron | 55.0% |
| ! | CCCCTTCCCATTTTGGATGG+AGG | - | chr7.1:42343275-42343294 | MS.gene65132:intron | 55.0% |
| ! | CGGTTGGCTGATTGTGCCAT+TGG | - | chr7.1:42342923-42342942 | MS.gene65132:intron | 55.0% |
| ! | CGTAGCTCCCCTTCCCATTT+TGG | - | chr7.1:42343268-42343287 | MS.gene65132:intron | 55.0% |
| ! | GCTCCCCTTCCCATTTTGGA+TGG | - | chr7.1:42343272-42343291 | MS.gene65132:intron | 55.0% |
| ! | GGGCAAGGTATCTGTTGCCT+TGG | + | chr7.1:42344108-42344127 | None:intergenic | 55.0% |
| !! | AGAGGTCCCTCTGAGACACT+AGG | + | chr7.1:42343903-42343922 | None:intergenic | 55.0% |
| !! | CAAAAGGGTTCTGAGGGGCA+AGG | + | chr7.1:42344123-42344142 | None:intergenic | 55.0% |
| CAGCGCCAGCAGTCATCCAT+TGG | + | chr7.1:42342875-42342894 | None:intergenic | 60.0% | |
| GGTCCGGAGTATGGAAGGGT+TGG | - | chr7.1:42344274-42344293 | MS.gene65132:intron | 60.0% | |
| GTACAGACGCCGAAAGCGGT+TGG | - | chr7.1:42342907-42342926 | MS.gene65132:intron | 60.0% | |
| GTGCCAGGTCTTGGGTTCAC+GGG | + | chr7.1:42343019-42343038 | None:intergenic | 60.0% | |
| TGCCAGGTCTTGGGTTCACG+GGG | + | chr7.1:42343018-42343037 | None:intergenic | 60.0% | |
| ! | AGACTGGTGGGTCGGTCATG+TGG | + | chr7.1:42342520-42342539 | None:intergenic | 60.0% |
| ! | GACTGGTGGGTCGGTCATGT+GGG | + | chr7.1:42342519-42342538 | None:intergenic | 60.0% |
| ! | GAGGGATGAGACTGGTGGGT+CGG | + | chr7.1:42342528-42342547 | None:intergenic | 60.0% |
| !! | GACGGAGAGTGCCAGGTCTT+GGG | + | chr7.1:42343027-42343046 | None:intergenic | 60.0% |
| !! | TGACGGAGAGTGCCAGGTCT+TGG | + | chr7.1:42343028-42343047 | None:intergenic | 60.0% |
| GACCCCGTGAACCCAAGACC+TGG | - | chr7.1:42343013-42343032 | MS.gene65132:intron | 65.0% | |
| GCCGCAGCTCCTCTTCCTGA+TGG | + | chr7.1:42344348-42344367 | None:intergenic | 65.0% | |
| TCACGGGGTCGTCGTCCCTT+GGG | + | chr7.1:42343003-42343022 | None:intergenic | 65.0% | |
| TTCACGGGGTCGTCGTCCCT+TGG | + | chr7.1:42343004-42343023 | None:intergenic | 65.0% | |
| !! | ACGGCGTGACGGAGAGTGCC+AGG | + | chr7.1:42343034-42343053 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 42339324 | 42344473 | 42339324 | ID=MS.gene65132 |
| chr7.1 | mRNA | 42339324 | 42344473 | 42339324 | ID=MS.gene65132.t1;Parent=MS.gene65132 |
| chr7.1 | exon | 42344379 | 42344473 | 42344379 | ID=MS.gene65132.t1.exon1;Parent=MS.gene65132.t1 |
| chr7.1 | CDS | 42344379 | 42344473 | 42344379 | ID=cds.MS.gene65132.t1;Parent=MS.gene65132.t1 |
| chr7.1 | exon | 42344166 | 42344228 | 42344166 | ID=MS.gene65132.t1.exon2;Parent=MS.gene65132.t1 |
| chr7.1 | CDS | 42344166 | 42344228 | 42344166 | ID=cds.MS.gene65132.t1;Parent=MS.gene65132.t1 |
| chr7.1 | exon | 42343769 | 42343837 | 42343769 | ID=MS.gene65132.t1.exon3;Parent=MS.gene65132.t1 |
| chr7.1 | CDS | 42343769 | 42343837 | 42343769 | ID=cds.MS.gene65132.t1;Parent=MS.gene65132.t1 |
| chr7.1 | exon | 42340344 | 42340986 | 42340344 | ID=MS.gene65132.t1.exon4;Parent=MS.gene65132.t1 |
| chr7.1 | CDS | 42340344 | 42340986 | 42340344 | ID=cds.MS.gene65132.t1;Parent=MS.gene65132.t1 |
| chr7.1 | exon | 42340079 | 42340182 | 42340079 | ID=MS.gene65132.t1.exon5;Parent=MS.gene65132.t1 |
| chr7.1 | CDS | 42340079 | 42340182 | 42340079 | ID=cds.MS.gene65132.t1;Parent=MS.gene65132.t1 |
| chr7.1 | exon | 42339647 | 42339785 | 42339647 | ID=MS.gene65132.t1.exon6;Parent=MS.gene65132.t1 |
| chr7.1 | CDS | 42339647 | 42339785 | 42339647 | ID=cds.MS.gene65132.t1;Parent=MS.gene65132.t1 |
| chr7.1 | exon | 42339324 | 42339545 | 42339324 | ID=MS.gene65132.t1.exon7;Parent=MS.gene65132.t1 |
| chr7.1 | CDS | 42339324 | 42339545 | 42339324 | ID=cds.MS.gene65132.t1;Parent=MS.gene65132.t1 |
| Gene Sequence |
| Protein sequence |