Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65408.t1 | XP_003604281.1 | 94.1 | 186 | 11 | 0 | 90 | 275 | 6 | 191 | 3.10E-97 | 365.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65408.t1 | Q9LVD0 | 74.5 | 184 | 47 | 0 | 90 | 273 | 6 | 189 | 1.8e-77 | 290.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65408.t1 | G7JEI8 | 94.1 | 186 | 11 | 0 | 90 | 275 | 6 | 191 | 2.3e-97 | 365.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053195 | MS.gene65408 | 0.8531 | 2.99E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65408.t1 | MTR_4g007420 | 94.086 | 186 | 11 | 0 | 90 | 275 | 6 | 191 | 1.19e-127 | 366 |
| MS.gene65408.t1 | MTR_4g127640 | 79.348 | 184 | 38 | 0 | 90 | 273 | 6 | 189 | 3.47e-106 | 311 |
| MS.gene65408.t1 | MTR_4g127640 | 74.457 | 184 | 38 | 1 | 90 | 273 | 6 | 180 | 1.22e-96 | 287 |
| MS.gene65408.t1 | MTR_4g127640 | 77.778 | 135 | 30 | 0 | 139 | 273 | 64 | 198 | 7.32e-74 | 229 |
| MS.gene65408.t1 | MTR_4g007390 | 82.143 | 56 | 10 | 0 | 90 | 145 | 6 | 61 | 1.51e-26 | 100 |
| MS.gene65408.t1 | MTR_5g056620 | 90.000 | 30 | 3 | 0 | 60 | 89 | 35 | 64 | 5.94e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65408.t1 | AT5G57280 | 74.457 | 184 | 47 | 0 | 90 | 273 | 6 | 189 | 2.42e-100 | 296 |
Find 90 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTTTGATTTCAGGGTTT+AGG | 0.182180 | 4.3:-88093260 | MS.gene65408:intron |
| ATCTTTGATTTCAGGGTTTA+GGG | 0.182277 | 4.3:-88093259 | MS.gene65408:intron |
| TTCCCGTAACATTGAAATTC+AGG | 0.224195 | 4.3:-88094528 | MS.gene65408:intron |
| ATACTTGCAACATGTTTATC+TGG | 0.228099 | 4.3:-88095503 | MS.gene65408:CDS |
| GCAATGAAAGCTGGATTTAC+TGG | 0.283729 | 4.3:-88092639 | MS.gene65408:CDS |
| GTAAATCCAGCTTTCATTGC+AGG | 0.296762 | 4.3:+88092642 | None:intergenic |
| ATTTGTCAAGCATTTGTATA+AGG | 0.304310 | 4.3:+88092728 | None:intergenic |
| TTCATAAGTACCATCCAATA+TGG | 0.312939 | 4.3:+88095622 | None:intergenic |
| CATCGGTATATCTGCCATTC+AGG | 0.313191 | 4.3:-88093210 | MS.gene65408:intron |
| TGATGGCGGCTGGCGATGGC+AGG | 0.339670 | 4.3:+88091869 | None:intergenic |
| TTCAATGTTACGGGAATTAG+AGG | 0.341768 | 4.3:+88094535 | None:intergenic |
| GACCCATGTCACCGAGTAAA+AGG | 0.358459 | 4.3:+88093924 | None:intergenic |
| AAACCTGAATTTCAATGTTA+CGG | 0.373267 | 4.3:+88094525 | None:intergenic |
| TCTTGTAGCTGTCATCAAAA+TGG | 0.374765 | 4.3:+88095678 | None:intergenic |
| GGGGTATAGTGGTGGATTAT+CGG | 0.377554 | 4.3:-88092617 | MS.gene65408:CDS |
| CAGGGTTTAGGGCTTCGTTT+TGG | 0.382986 | 4.3:-88093248 | MS.gene65408:CDS |
| AACCTGAATTTCAATGTTAC+GGG | 0.383633 | 4.3:+88094526 | None:intergenic |
| AACTAGGCTAAGAGTGGGTC+TGG | 0.384370 | 4.3:+88091821 | None:intergenic |
| CGCATTGGAGCGTGAGGTTG+AGG | 0.393884 | 4.3:-88093951 | MS.gene65408:CDS |
| AACATATAGGAAGACAGTTC+TGG | 0.408794 | 4.3:-88095651 | MS.gene65408:CDS |
| AATTTGTTCTCCTCGTTCCC+TGG | 0.421223 | 4.3:-88091912 | MS.gene65408:CDS |
| ATGGCGGCTGGCGATGGCAG+GGG | 0.423688 | 4.3:+88091871 | None:intergenic |
| TAACTTAGGAACACCGTCAT+TGG | 0.426115 | 4.3:+88094388 | None:intergenic |
| TATGCTTCCTTGTCGTTCCA+TGG | 0.426862 | 4.3:+88095789 | None:intergenic |
| AGTTCTGGAGATGTCCATAT+TGG | 0.430250 | 4.3:-88095636 | MS.gene65408:CDS |
| GGGTATAGTGGTGGATTATC+GGG | 0.438846 | 4.3:-88092616 | MS.gene65408:CDS |
| ATGGAACGCCGGTGGCAACC+AGG | 0.452065 | 4.3:+88091894 | None:intergenic |
| AGGTTGATGGCGGCTGGCGA+TGG | 0.456303 | 4.3:+88091865 | None:intergenic |
| GATGGCGGCTGGCGATGGCA+GGG | 0.456712 | 4.3:+88091870 | None:intergenic |
| CGGCTGGCGATGGCAGGGGA+TGG | 0.460944 | 4.3:+88091875 | None:intergenic |
| AGCAGTATTTCAAGTGTATC+CGG | 0.461795 | 4.3:-88092697 | MS.gene65408:CDS |
| CAATGAAAGCTGGATTTACT+GGG | 0.464441 | 4.3:-88092638 | MS.gene65408:CDS |
| TTATACAAATGCTTGACAAA+TGG | 0.468044 | 4.3:-88092726 | MS.gene65408:CDS |
| ATTGAGGATATTGATGATGA+TGG | 0.468581 | 4.3:-88095444 | MS.gene65408:CDS |
| TTCAATGACTGAGCGAGCAC+TGG | 0.469446 | 4.3:-88094426 | MS.gene65408:CDS |
| CACAGAGAGTGGACACCATT+GGG | 0.471845 | 4.3:-88094111 | MS.gene65408:CDS |
| TTGAGTATGAACGATTGTTT+CGG | 0.481058 | 4.3:+88095761 | None:intergenic |
| TTGACAAAGGTAGAGGTTGA+TGG | 0.483960 | 4.3:+88091852 | None:intergenic |
| GCTACAAGAGGGAAACATAT+AGG | 0.484786 | 4.3:-88095664 | MS.gene65408:CDS |
| TTTACTCGGTGACATGGGTC+AGG | 0.486959 | 4.3:-88093921 | MS.gene65408:intron |
| ACCAGAGGCGGTAGCTCCAC+CGG | 0.499290 | 4.3:-88094594 | MS.gene65408:intron |
| GACATTGCACCCTCAATGCT+TGG | 0.507243 | 4.3:-88094080 | MS.gene65408:intron |
| AACTTAGGAACACCGTCATT+GGG | 0.512998 | 4.3:+88094389 | None:intergenic |
| AGGTAGAGGTTGATGGCGGC+TGG | 0.518582 | 4.3:+88091859 | None:intergenic |
| TTGAGTCCTGCAATGAAAGC+TGG | 0.520754 | 4.3:-88092648 | MS.gene65408:CDS |
| TACTTGCAACATGTTTATCT+GGG | 0.522803 | 4.3:-88095502 | MS.gene65408:CDS |
| CCAATGTCAAGGAGTAACTT+AGG | 0.523073 | 4.3:+88094374 | None:intergenic |
| GATGGCAGGGGATGGAACGC+CGG | 0.523546 | 4.3:+88091883 | None:intergenic |
| CCTCGTTCCCTGGTTGCCAC+CGG | 0.525134 | 4.3:-88091902 | MS.gene65408:CDS |
| TCACAGAGAGTGGACACCAT+TGG | 0.529338 | 4.3:-88094112 | MS.gene65408:CDS |
| GCATTGGAGCGTGAGGTTGA+GGG | 0.531379 | 4.3:-88093950 | MS.gene65408:CDS |
| TAAGAGTGGGTCTGGGACGG+AGG | 0.532260 | 4.3:+88091829 | None:intergenic |
| ACTAGCATACCAAGCATTGA+GGG | 0.538511 | 4.3:+88094071 | None:intergenic |
| TTAACTTGTAGATATCGCAT+TGG | 0.541703 | 4.3:-88093966 | MS.gene65408:intron |
| TTATCTAAAGCAAACCTGAA+TGG | 0.544627 | 4.3:+88093196 | None:intergenic |
| GGAATGTTTGATGGGGCCAT+CGG | 0.547297 | 4.3:-88093227 | MS.gene65408:CDS |
| TACTAGCATACCAAGCATTG+AGG | 0.548542 | 4.3:+88094070 | None:intergenic |
| CCTAAGTTACTCCTTGACAT+TGG | 0.548757 | 4.3:-88094374 | MS.gene65408:intron |
| TGGAACGCCGGTGGCAACCA+GGG | 0.549655 | 4.3:+88091895 | None:intergenic |
| GGCTAAGAGTGGGTCTGGGA+CGG | 0.558026 | 4.3:+88091826 | None:intergenic |
| GGTTGTGGATCGGGACTTAG+CGG | 0.566307 | 4.3:-88094143 | MS.gene65408:CDS |
| GCATACTTCAATCTTAGATG+AGG | 0.569225 | 4.3:+88092878 | None:intergenic |
| TCATCGTCGTAAAATATCTC+CGG | 0.571583 | 4.3:+88094575 | None:intergenic |
| CATACTTCAATCTTAGATGA+GGG | 0.573227 | 4.3:+88092879 | None:intergenic |
| TAGTGGTGGATTATCGGGAC+AGG | 0.577706 | 4.3:-88092611 | MS.gene65408:intron |
| CTGGAGATGTCCATATTGGA+TGG | 0.579134 | 4.3:-88095632 | MS.gene65408:intron |
| CAAGAAAACTAGGCTAAGAG+TGG | 0.579391 | 4.3:+88091815 | None:intergenic |
| ACGGAGGTTGACAAAGGTAG+AGG | 0.580410 | 4.3:+88091845 | None:intergenic |
| GGCAGGGGATGGAACGCCGG+TGG | 0.586208 | 4.3:+88091886 | None:intergenic |
| ACTAGGCTAAGAGTGGGTCT+GGG | 0.588748 | 4.3:+88091822 | None:intergenic |
| TGATGACACTGATGAGATTG+AGG | 0.589027 | 4.3:-88095460 | MS.gene65408:CDS |
| GAAATAACATACCAATGTCA+AGG | 0.594135 | 4.3:+88094363 | None:intergenic |
| CTTCTCAATTTACCCAATGA+CGG | 0.600645 | 4.3:-88094401 | MS.gene65408:CDS |
| CCGGTGGCAACCAGGGAACG+AGG | 0.606424 | 4.3:+88091902 | None:intergenic |
| TCGTCGTAAAATATCTCCGG+TGG | 0.621804 | 4.3:+88094578 | None:intergenic |
| GAGAGTGGACACCATTGGGT+TGG | 0.626926 | 4.3:-88094107 | MS.gene65408:CDS |
| CAATGTCGAGACCAACCCAA+TGG | 0.632121 | 4.3:+88094096 | None:intergenic |
| TCTGGGACGGAGGTTGACAA+AGG | 0.644851 | 4.3:+88091839 | None:intergenic |
| AGATATCGCATTGGAGCGTG+AGG | 0.647913 | 4.3:-88093957 | MS.gene65408:CDS |
| CTGAATGGCAGATATACCGA+TGG | 0.676516 | 4.3:+88093211 | None:intergenic |
| AAGAAAACTAGGCTAAGAGT+GGG | 0.676691 | 4.3:+88091816 | None:intergenic |
| GGTGAGGTAATCACAGAGAG+TGG | 0.681616 | 4.3:-88094122 | MS.gene65408:CDS |
| GAGGATATTGATGATGATGG+AGG | 0.686062 | 4.3:-88095441 | MS.gene65408:intron |
| ATGAAAGCTGGATTTACTGG+GGG | 0.686788 | 4.3:-88092636 | MS.gene65408:CDS |
| TGGAGAACCATGGAACGACA+AGG | 0.691843 | 4.3:-88095796 | None:intergenic |
| AATGAAAGCTGGATTTACTG+GGG | 0.700229 | 4.3:-88092637 | MS.gene65408:CDS |
| TTTACGACGATGATACAGCA+CGG | 0.708740 | 4.3:-88094565 | MS.gene65408:CDS |
| ACAAAGGTAGAGGTTGATGG+CGG | 0.719446 | 4.3:+88091855 | None:intergenic |
| TCTTCTTCAACTCGACCCAG+AGG | 0.723339 | 4.3:-88095727 | MS.gene65408:CDS |
| TGGATCGGGACTTAGCGGTG+AGG | 0.729748 | 4.3:-88094138 | MS.gene65408:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTAATAAAATCTAAGT+AGG | - | chr4.3:88092670-88092689 | MS.gene65408:CDS | 10.0% |
| !! | AATTTAATAAAATCTAAGTA+GGG | - | chr4.3:88092671-88092690 | MS.gene65408:CDS | 10.0% |
| !!! | AAAAGAATAATTTTACTATT+TGG | - | chr4.3:88095112-88095131 | MS.gene65408:intron | 10.0% |
| !!! | AAAGAATAATTTTACTATTT+GGG | - | chr4.3:88095113-88095132 | MS.gene65408:intron | 10.0% |
| !!! | CTTAGATTTTATTAAATTTT+TGG | + | chr4.3:88092669-88092688 | None:intergenic | 10.0% |
| !! | AAATAAAATATACTGTTACT+AGG | - | chr4.3:88092962-88092981 | MS.gene65408:intron | 15.0% |
| !! | AAATATAGTAGTTTAAATGA+AGG | - | chr4.3:88094218-88094237 | MS.gene65408:intron | 15.0% |
| !! | AAATGAAGGATAAATATAAT+TGG | - | chr4.3:88094232-88094251 | MS.gene65408:intron | 15.0% |
| !! | AATAAAATATACTGTTACTA+GGG | - | chr4.3:88092963-88092982 | MS.gene65408:intron | 15.0% |
| !! | ACTAATGTTTATCAATAAAA+TGG | + | chr4.3:88094089-88094108 | None:intergenic | 15.0% |
| !! | ATAATTAACCCTAAAAAAAA+AGG | - | chr4.3:88092734-88092753 | MS.gene65408:CDS | 15.0% |
| !! | ATATCAATAAGTTTACTAAA+AGG | - | chr4.3:88092404-88092423 | MS.gene65408:intron | 15.0% |
| !! | CAAATTAAGAAATGTAATAA+CGG | - | chr4.3:88095316-88095335 | MS.gene65408:intron | 15.0% |
| !! | CTATAACCTAAATATATAAA+GGG | + | chr4.3:88094285-88094304 | None:intergenic | 15.0% |
| !! | TAATAGAAATAAGCTAAATT+TGG | - | chr4.3:88093912-88093931 | MS.gene65408:intron | 15.0% |
| !! | TAATTAACCCTAAAAAAAAA+GGG | - | chr4.3:88092735-88092754 | MS.gene65408:CDS | 15.0% |
| !! | TATAACCTAAATATATAAAG+GGG | + | chr4.3:88094284-88094303 | None:intergenic | 15.0% |
| !! | TCTATAACCTAAATATATAA+AGG | + | chr4.3:88094286-88094305 | None:intergenic | 15.0% |
| !! | TTATATTAGTGTTTATGTAT+AGG | - | chr4.3:88093806-88093825 | MS.gene65408:intron | 15.0% |
| !!! | AAAAAAAAGTATGATAGATA+AGG | + | chr4.3:88094764-88094783 | None:intergenic | 15.0% |
| !!! | ATATTTTTTATATTGGTGTA+AGG | - | chr4.3:88095469-88095488 | MS.gene65408:CDS | 15.0% |
| !!! | TAGCATATTATTTTTATCAA+GGG | + | chr4.3:88094137-88094156 | None:intergenic | 15.0% |
| !!! | TATTTTTTATATTGGTGTAA+GGG | - | chr4.3:88095470-88095489 | MS.gene65408:CDS | 15.0% |
| !!! | TTTTATCATGTAATAAAACA+TGG | + | chr4.3:88092945-88092964 | None:intergenic | 15.0% |
| !! | AAACTACAAAAATTAATGCA+TGG | - | chr4.3:88094448-88094467 | MS.gene65408:intron | 20.0% |
| !! | AATATCCCCTTTATATATTT+AGG | - | chr4.3:88094276-88094295 | MS.gene65408:intron | 20.0% |
| !! | ACTATATAGTATTAGAAAAC+AGG | - | chr4.3:88095382-88095401 | MS.gene65408:intron | 20.0% |
| !! | CTATATAGTATTAGAAAACA+GGG | - | chr4.3:88095383-88095402 | MS.gene65408:intron | 20.0% |
| !! | GTTTATCAATAAAATGGAAA+AGG | + | chr4.3:88094083-88094102 | None:intergenic | 20.0% |
| !! | TAAGTGTCAAATTATGAAAT+CGG | + | chr4.3:88092849-88092868 | None:intergenic | 20.0% |
| !!! | ATATTATTTTTATCAAGGGA+TGG | + | chr4.3:88094133-88094152 | None:intergenic | 20.0% |
| !!! | CAATCTTCTTTGTTTTTTTT+TGG | - | chr4.3:88092274-88092293 | MS.gene65408:intron | 20.0% |
| !!! | GTAGCATATTATTTTTATCA+AGG | + | chr4.3:88094138-88094157 | None:intergenic | 20.0% |
| !!! | TTATCATTGTTTCTTACTTA+GGG | + | chr4.3:88092346-88092365 | None:intergenic | 20.0% |
| !!! | TTTAGGGTTAATTATGTTTT+AGG | + | chr4.3:88092729-88092748 | None:intergenic | 20.0% |
| !!! | TTTATCATTGTTTCTTACTT+AGG | + | chr4.3:88092347-88092366 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGTTCCTTTGTA+GGG | - | chr4.3:88094847-88094866 | MS.gene65408:intron | 20.0% |
| !!! | TTTTTTTTTTGTTCCTTTGT+AGG | - | chr4.3:88094846-88094865 | MS.gene65408:intron | 20.0% |
| ! | AAAAAAAAAACAGTGATAGG+CGG | + | chr4.3:88095189-88095208 | None:intergenic | 25.0% |
| ! | AAACACAACAAATCAGAAAT+CGG | + | chr4.3:88093155-88093174 | None:intergenic | 25.0% |
| ! | AAACCTGAATTTCAATGTTA+CGG | + | chr4.3:88093088-88093107 | None:intergenic | 25.0% |
| ! | AGCAAAAAAAAAACAGTGAT+AGG | + | chr4.3:88095192-88095211 | None:intergenic | 25.0% |
| ! | ATTTGACACTTAATTGCTAA+AGG | - | chr4.3:88092857-88092876 | MS.gene65408:intron | 25.0% |
| ! | ATTTGTCAAGCATTTGTATA+AGG | + | chr4.3:88094885-88094904 | None:intergenic | 25.0% |
| ! | GTATTTGATCAAGTAAACAA+TGG | - | chr4.3:88094186-88094205 | MS.gene65408:intron | 25.0% |
| ! | TAAAAAGAAGAAGAAGAAGA+GGG | + | chr4.3:88093112-88093131 | None:intergenic | 25.0% |
| ! | TGAGTATATTCTTCTTAACA+CGG | + | chr4.3:88094477-88094496 | None:intergenic | 25.0% |
| ! | TGAGTTTCATTTCATTTCAT+CGG | + | chr4.3:88094505-88094524 | None:intergenic | 25.0% |
| ! | TGTAAATACTTTAGCGATAT+GGG | + | chr4.3:88095252-88095271 | None:intergenic | 25.0% |
| ! | TTAAAAAGAAGAAGAAGAAG+AGG | + | chr4.3:88093113-88093132 | None:intergenic | 25.0% |
| ! | TTATACAAATGCTTGACAAA+TGG | - | chr4.3:88094884-88094903 | MS.gene65408:intron | 25.0% |
| ! | TTTGACACTTAATTGCTAAA+GGG | - | chr4.3:88092858-88092877 | MS.gene65408:intron | 25.0% |
| !! | AATTTTACTATTTGGGCTTA+GGG | - | chr4.3:88095120-88095139 | MS.gene65408:intron | 25.0% |
| !! | ACTACTTTATCTTTGATTTC+AGG | - | chr4.3:88094343-88094362 | MS.gene65408:intron | 25.0% |
| !! | ATAAAGGGGATATTAAGTTT+TGG | + | chr4.3:88094270-88094289 | None:intergenic | 25.0% |
| !! | ATAATGTATACCCTTTTCTT+AGG | - | chr4.3:88092431-88092450 | MS.gene65408:intron | 25.0% |
| !! | CTACTTTATCTTTGATTTCA+GGG | - | chr4.3:88094344-88094363 | MS.gene65408:intron | 25.0% |
| !! | TAATTTTACTATTTGGGCTT+AGG | - | chr4.3:88095119-88095138 | MS.gene65408:intron | 25.0% |
| !! | TATCATTGTTTCTTACTTAG+GGG | + | chr4.3:88092345-88092364 | None:intergenic | 25.0% |
| !! | TTGTTGTTATGCTCTAATAA+AGG | - | chr4.3:88094047-88094066 | MS.gene65408:intron | 25.0% |
| !!! | CTTATTTCTATTAGTTCTCA+AGG | + | chr4.3:88093905-88093924 | None:intergenic | 25.0% |
| !!! | GTTAGCTTAGTTGTTTTTAT+CGG | - | chr4.3:88093276-88093295 | MS.gene65408:intron | 25.0% |
| !!! | TCTTTGTTTTTTTTTGGCAT+TGG | - | chr4.3:88092280-88092299 | MS.gene65408:intron | 25.0% |
| !!! | TGTGAATGTTTGTTTTGTTT+AGG | - | chr4.3:88093446-88093465 | MS.gene65408:intron | 25.0% |
| !!! | TTTTTAGCTGTTAGCAAAAT+TGG | + | chr4.3:88092637-88092656 | None:intergenic | 25.0% |
| !!! | TTTTTTACTTGATAATGCAG+TGG | - | chr4.3:88094679-88094698 | MS.gene65408:intron | 25.0% |
| AAAAAAGTTGTAAAGAAGCG+AGG | + | chr4.3:88094831-88094850 | None:intergenic | 30.0% | |
| AACAAAGAAGATTGTTGAAC+TGG | + | chr4.3:88092268-88092287 | None:intergenic | 30.0% | |
| AACCTGAATTTCAATGTTAC+GGG | + | chr4.3:88093087-88093106 | None:intergenic | 30.0% | |
| ACAAAGAAGATTGTTGAACT+GGG | + | chr4.3:88092267-88092286 | None:intergenic | 30.0% | |
| ATACTTGCAACATGTTTATC+TGG | - | chr4.3:88092107-88092126 | MS.gene65408:intron | 30.0% | |
| ATATGAAAAGAAGAGAGAAC+TGG | + | chr4.3:88092040-88092059 | None:intergenic | 30.0% | |
| ATGTAAAAAAAGCCCTACAA+AGG | + | chr4.3:88094862-88094881 | None:intergenic | 30.0% | |
| ATTACTCTTGATGAAACGAA+TGG | + | chr4.3:88095045-88095064 | None:intergenic | 30.0% | |
| CATACTTCAATCTTAGATGA+GGG | + | chr4.3:88094734-88094753 | None:intergenic | 30.0% | |
| CCGAAGAAATCTAAAAACTT+CGG | + | chr4.3:88092787-88092806 | None:intergenic | 30.0% | |
| GAAATAACATACCAATGTCA+AGG | + | chr4.3:88093250-88093269 | None:intergenic | 30.0% | |
| GTGTAAATACTTTAGCGATA+TGG | + | chr4.3:88095253-88095272 | None:intergenic | 30.0% | |
| TACTTGCAACATGTTTATCT+GGG | - | chr4.3:88092108-88092127 | MS.gene65408:intron | 30.0% | |
| TCCAATGTATGTAAAGCATA+TGG | - | chr4.3:88094788-88094807 | MS.gene65408:intron | 30.0% | |
| TCCATATGCTTTACATACAT+TGG | + | chr4.3:88094792-88094811 | None:intergenic | 30.0% | |
| TGCTAACAGCTAAAAACTAT+GGG | - | chr4.3:88092641-88092660 | MS.gene65408:CDS | 30.0% | |
| TGGTAATTGTATGAAGATGA+AGG | - | chr4.3:88092084-88092103 | MS.gene65408:intron | 30.0% | |
| TTAAATACCGAGGAAAACTT+CGG | + | chr4.3:88092820-88092839 | None:intergenic | 30.0% | |
| TTCATAAGTACCATCCAATA+TGG | + | chr4.3:88091991-88092010 | None:intergenic | 30.0% | |
| TTGACACTTAATTGCTAAAG+GGG | - | chr4.3:88092859-88092878 | MS.gene65408:intron | 30.0% | |
| TTGAGTATGAACGATTGTTT+CGG | + | chr4.3:88091852-88091871 | None:intergenic | 30.0% | |
| TTGCTAACAGCTAAAAACTA+TGG | - | chr4.3:88092640-88092659 | MS.gene65408:CDS | 30.0% | |
| TTGTGTTTAATTCTGACATC+TGG | - | chr4.3:88092064-88092083 | MS.gene65408:intron | 30.0% | |
| ! | ATAACAACAAAGCATTTGGT+TGG | + | chr4.3:88094037-88094056 | None:intergenic | 30.0% |
| ! | ATCTTTGATTTCAGGGTTTA+GGG | - | chr4.3:88094351-88094370 | MS.gene65408:intron | 30.0% |
| ! | CCTTAAACGACATTTTGAAT+CGG | + | chr4.3:88095286-88095305 | None:intergenic | 30.0% |
| ! | GTTGTCAATCATAGATTTTG+TGG | - | chr4.3:88093741-88093760 | MS.gene65408:intron | 30.0% |
| ! | TATCTTTGATTTCAGGGTTT+AGG | - | chr4.3:88094350-88094369 | MS.gene65408:intron | 30.0% |
| ! | TTATCTAAAGCAAACCTGAA+TGG | + | chr4.3:88094417-88094436 | None:intergenic | 30.0% |
| !! | AATGTTGGTGATTCATCTAA+CGG | + | chr4.3:88092602-88092621 | None:intergenic | 30.0% |
| !! | ATTGAGGATATTGATGATGA+TGG | - | chr4.3:88092166-88092185 | MS.gene65408:intron | 30.0% |
| !! | CCGAAGTTTTTAGATTTCTT+CGG | - | chr4.3:88092784-88092803 | MS.gene65408:intron | 30.0% |
| !! | TGTTTTAGGTCCCTATAAAT+AGG | + | chr4.3:88092715-88092734 | None:intergenic | 30.0% |
| !! | TTAACTTGTAGATATCGCAT+TGG | - | chr4.3:88093644-88093663 | MS.gene65408:intron | 30.0% |
| !! | TTACTAGGGTTTTGTGAATT+GGG | - | chr4.3:88092977-88092996 | MS.gene65408:intron | 30.0% |
| !!! | CCTCAAACCCTTTTTTTTTA+GGG | + | chr4.3:88092745-88092764 | None:intergenic | 30.0% |
| !!! | TCCTCAAACCCTTTTTTTTT+AGG | + | chr4.3:88092746-88092765 | None:intergenic | 30.0% |
| !!! | TGTTTGTTTTGTTTAGGTTG+TGG | - | chr4.3:88093452-88093471 | MS.gene65408:intron | 30.0% |
| !!! | TTCGTTTTGGAATGTTTGAT+GGG | - | chr4.3:88094375-88094394 | MS.gene65408:CDS | 30.0% |
| AACATATAGGAAGACAGTTC+TGG | - | chr4.3:88091959-88091978 | MS.gene65408:intron | 35.0% | |
| AATGAAAGCTGGATTTACTG+GGG | - | chr4.3:88094973-88094992 | MS.gene65408:intron | 35.0% | |
| ACACGTAAACCAAGAAAACT+TGG | + | chr4.3:88094631-88094650 | None:intergenic | 35.0% | |
| ACTTATCCCAGATCAAAATG+GGG | + | chr4.3:88094596-88094615 | None:intergenic | 35.0% | |
| ATCTAAGTAGGGACTAATGT+TGG | - | chr4.3:88092682-88092701 | MS.gene65408:CDS | 35.0% | |
| ATTCTTGTGAGAACTGATGA+AGG | - | chr4.3:88095217-88095236 | MS.gene65408:intron | 35.0% | |
| CAATGAAAGCTGGATTTACT+GGG | - | chr4.3:88094972-88094991 | MS.gene65408:intron | 35.0% | |
| CCAAGAAAACTTGGTAGAAA+AGG | + | chr4.3:88094622-88094641 | None:intergenic | 35.0% | |
| CCCTAAAAAAAAAGGGTTTG+AGG | - | chr4.3:88092742-88092761 | MS.gene65408:CDS | 35.0% | |
| CTAGTCTGATATGTTTGAGT+TGG | - | chr4.3:88092530-88092549 | MS.gene65408:intron | 35.0% | |
| CTTCTCAATTTACCCAATGA+CGG | - | chr4.3:88093209-88093228 | MS.gene65408:intron | 35.0% | |
| GACTTATCCCAGATCAAAAT+GGG | + | chr4.3:88094597-88094616 | None:intergenic | 35.0% | |
| GATGAATCACCAACATTTCA+CGG | - | chr4.3:88092605-88092624 | MS.gene65408:intron | 35.0% | |
| GCATACTTCAATCTTAGATG+AGG | + | chr4.3:88094735-88094754 | None:intergenic | 35.0% | |
| GCTAACAGCTAAAAACTATG+GGG | - | chr4.3:88092642-88092661 | MS.gene65408:CDS | 35.0% | |
| GTAGGAATTCTGTTATGCTA+TGG | - | chr4.3:88093777-88093796 | MS.gene65408:intron | 35.0% | |
| TCATCGTCGTAAAATATCTC+CGG | + | chr4.3:88093038-88093057 | None:intergenic | 35.0% | |
| TCTTGTAGCTGTCATCAAAA+TGG | + | chr4.3:88091935-88091954 | None:intergenic | 35.0% | |
| TGACTTATCCCAGATCAAAA+TGG | + | chr4.3:88094598-88094617 | None:intergenic | 35.0% | |
| TGGAAACACGCCTATTTATA+GGG | - | chr4.3:88092702-88092721 | MS.gene65408:CDS | 35.0% | |
| TGTGGAAAATAGCAGTTTGT+AGG | - | chr4.3:88093759-88093778 | MS.gene65408:intron | 35.0% | |
| TTCAATGTTACGGGAATTAG+AGG | + | chr4.3:88093078-88093097 | None:intergenic | 35.0% | |
| TTCCCGTAACATTGAAATTC+AGG | - | chr4.3:88093082-88093101 | MS.gene65408:intron | 35.0% | |
| TTGGAAACACGCCTATTTAT+AGG | - | chr4.3:88092701-88092720 | MS.gene65408:CDS | 35.0% | |
| ! | AACGACATTTTGAATCGGTA+TGG | + | chr4.3:88095281-88095300 | None:intergenic | 35.0% |
| ! | AGCAGTATTTCAAGTGTATC+CGG | - | chr4.3:88094913-88094932 | MS.gene65408:intron | 35.0% |
| ! | ATGATGGAGGTAAACATCAT+TGG | - | chr4.3:88092182-88092201 | MS.gene65408:intron | 35.0% |
| ! | ATTTTTATCAAGGGATGGAC+AGG | + | chr4.3:88094128-88094147 | None:intergenic | 35.0% |
| ! | CCGATTCAAAATGTCGTTTA+AGG | - | chr4.3:88095283-88095302 | MS.gene65408:intron | 35.0% |
| ! | CCTTTTCTACCAAGTTTTCT+TGG | - | chr4.3:88094619-88094638 | MS.gene65408:intron | 35.0% |
| ! | GAGCATAACAACAAAGCATT+TGG | + | chr4.3:88094041-88094060 | None:intergenic | 35.0% |
| !! | ATTTTGATGACAGCTACAAG+AGG | - | chr4.3:88091934-88091953 | MS.gene65408:intron | 35.0% |
| !! | GACAACAATTTGCTGAAATC+AGG | + | chr4.3:88093727-88093746 | None:intergenic | 35.0% |
| !! | GTTACTAGGGTTTTGTGAAT+TGG | - | chr4.3:88092976-88092995 | MS.gene65408:intron | 35.0% |
| !! | TTTTGATGACAGCTACAAGA+GGG | - | chr4.3:88091935-88091954 | MS.gene65408:intron | 35.0% |
| !!! | CTTCGTTTTGGAATGTTTGA+TGG | - | chr4.3:88094374-88094393 | MS.gene65408:intron | 35.0% |
| !!! | GTTTTGTTTAGGTTGTGGAT+CGG | - | chr4.3:88093457-88093476 | MS.gene65408:intron | 35.0% |
| !!! | TCGTTTTGGAATGTTTGATG+GGG | - | chr4.3:88094376-88094395 | MS.gene65408:CDS | 35.0% |
| !!! | TTTTGTTTAGGTTGTGGATC+GGG | - | chr4.3:88093458-88093477 | MS.gene65408:intron | 35.0% |
| AAAAGGGTTTGAGGATTCCT+CGG | - | chr4.3:88092751-88092770 | MS.gene65408:intron | 40.0% | |
| AACTTAGGAACACCGTCATT+GGG | + | chr4.3:88093224-88093243 | None:intergenic | 40.0% | |
| AGCCATATGCAATGTGTCAA+CGG | - | chr4.3:88092909-88092928 | MS.gene65408:CDS | 40.0% | |
| ATCTGGTAAGAAGCAGTCTA+AGG | + | chr4.3:88092311-88092330 | None:intergenic | 40.0% | |
| ATGAAAGCTGGATTTACTGG+GGG | - | chr4.3:88094974-88094993 | MS.gene65408:intron | 40.0% | |
| ATGGACATGTGGCAATCATA+AGG | - | chr4.3:88093373-88093392 | MS.gene65408:intron | 40.0% | |
| CATATGTGTGAGTGTCCTAT+CGG | - | chr4.3:88093348-88093367 | MS.gene65408:intron | 40.0% | |
| CCAATGTCAAGGAGTAACTT+AGG | + | chr4.3:88093239-88093258 | None:intergenic | 40.0% | |
| CCTAAGTTACTCCTTGACAT+TGG | - | chr4.3:88093236-88093255 | MS.gene65408:CDS | 40.0% | |
| CTGCTATTGACAGCATAGAT+CGG | + | chr4.3:88095527-88095546 | None:intergenic | 40.0% | |
| GCAATGAAAGCTGGATTTAC+TGG | - | chr4.3:88094971-88094990 | MS.gene65408:intron | 40.0% | |
| GCTACAAGAGGGAAACATAT+AGG | - | chr4.3:88091946-88091965 | MS.gene65408:intron | 40.0% | |
| GTAAATCCAGCTTTCATTGC+AGG | + | chr4.3:88094971-88094990 | None:intergenic | 40.0% | |
| TAACTTAGGAACACCGTCAT+TGG | + | chr4.3:88093225-88093244 | None:intergenic | 40.0% | |
| TAAGTGCTTGTGAGACTGTT+TGG | + | chr4.3:88093985-88094004 | None:intergenic | 40.0% | |
| TCTGGTAAGAAGCAGTCTAA+GGG | + | chr4.3:88092310-88092329 | None:intergenic | 40.0% | |
| TGATGACACTGATGAGATTG+AGG | - | chr4.3:88092150-88092169 | MS.gene65408:intron | 40.0% | |
| TGCAGTAGCACCTAAGAAAA+GGG | + | chr4.3:88092444-88092463 | None:intergenic | 40.0% | |
| TGCTATTGACAGCATAGATC+GGG | + | chr4.3:88095526-88095545 | None:intergenic | 40.0% | |
| TGGACATGTGGCAATCATAA+GGG | - | chr4.3:88093374-88093393 | MS.gene65408:intron | 40.0% | |
| TTGACAAAGGTAGAGGTTGA+TGG | + | chr4.3:88095761-88095780 | None:intergenic | 40.0% | |
| TTTACGACGATGATACAGCA+CGG | - | chr4.3:88093045-88093064 | MS.gene65408:intron | 40.0% | |
| ! | ACACGTTGATCATCGTTTTC+CGG | + | chr4.3:88094935-88094954 | None:intergenic | 40.0% |
| ! | ATCTAACGGAAAAGCACATG+TGG | + | chr4.3:88092588-88092607 | None:intergenic | 40.0% |
| ! | TACTAGCATACCAAGCATTG+AGG | + | chr4.3:88093543-88093562 | None:intergenic | 40.0% |
| ! | TTAACTGCCGAAGTTTTCCT+CGG | - | chr4.3:88092810-88092829 | MS.gene65408:intron | 40.0% |
| ! | TTTTTATCGGTCACAGACAC+CGG | - | chr4.3:88093289-88093308 | MS.gene65408:intron | 40.0% |
| !! | AAAGAGTGCCTATAAGCCAT+GGG | + | chr4.3:88095164-88095183 | None:intergenic | 40.0% |
| !! | ACTAGCATACCAAGCATTGA+GGG | + | chr4.3:88093542-88093561 | None:intergenic | 40.0% |
| !! | AGGGTTTTGTGAATTGGGAT+CGG | - | chr4.3:88092982-88093001 | MS.gene65408:intron | 40.0% |
| !! | AGTTCTGGAGATGTCCATAT+TGG | - | chr4.3:88091974-88091993 | MS.gene65408:intron | 40.0% |
| !! | CAACATCCCCATTTTGATCT+GGG | - | chr4.3:88094587-88094606 | MS.gene65408:CDS | 40.0% |
| !! | GAGGATATTGATGATGATGG+AGG | - | chr4.3:88092169-88092188 | MS.gene65408:intron | 40.0% |
| ACTCCAACAACCAACAACTC+AGG | + | chr4.3:88092486-88092505 | None:intergenic | 45.0% | |
| AGAGGACAAAAATGTGGCTG+TGG | - | chr4.3:88091901-88091920 | MS.gene65408:CDS | 45.0% | |
| ATCACCAACATTTCACGGTG+AGG | - | chr4.3:88092610-88092629 | MS.gene65408:intron | 45.0% | |
| ATCATAAGGGTCGGTGATTC+AGG | - | chr4.3:88093387-88093406 | MS.gene65408:intron | 45.0% | |
| ATGCTGTCAATAGCAGCTGT+GGG | - | chr4.3:88095531-88095550 | MS.gene65408:intron | 45.0% | |
| CATCGGTATATCTGCCATTC+AGG | - | chr4.3:88094400-88094419 | MS.gene65408:CDS | 45.0% | |
| CATGTGGCAATCATAAGGGT+CGG | - | chr4.3:88093378-88093397 | MS.gene65408:intron | 45.0% | |
| CCAGATCAAAATGGGGATGT+TGG | + | chr4.3:88094589-88094608 | None:intergenic | 45.0% | |
| CTGAATGGCAGATATACCGA+TGG | + | chr4.3:88094402-88094421 | None:intergenic | 45.0% | |
| CTGCAGTAGCACCTAAGAAA+AGG | + | chr4.3:88092445-88092464 | None:intergenic | 45.0% | |
| CTGGAGATGTCCATATTGGA+TGG | - | chr4.3:88091978-88091997 | MS.gene65408:intron | 45.0% | |
| GAGGATTTCCCATGGCTTAT+AGG | - | chr4.3:88095153-88095172 | MS.gene65408:intron | 45.0% | |
| TATGCTGTCAATAGCAGCTG+TGG | - | chr4.3:88095530-88095549 | MS.gene65408:intron | 45.0% | |
| TCATAAGGGTCGGTGATTCA+GGG | - | chr4.3:88093388-88093407 | MS.gene65408:intron | 45.0% | |
| TCGTCGTAAAATATCTCCGG+TGG | + | chr4.3:88093035-88093054 | None:intergenic | 45.0% | |
| TGCCGTTGACACATTGCATA+TGG | + | chr4.3:88092914-88092933 | None:intergenic | 45.0% | |
| TGCTTCTTACCAGATCCAAC+AGG | - | chr4.3:88092316-88092335 | MS.gene65408:intron | 45.0% | |
| TTGAACTGGGTAGTAGCTCT+AGG | + | chr4.3:88092254-88092273 | None:intergenic | 45.0% | |
| TTGAGTCCTGCAATGAAAGC+TGG | - | chr4.3:88094962-88094981 | MS.gene65408:intron | 45.0% | |
| TTGTGAATTGGGATCGGGAT+GGG | - | chr4.3:88092988-88093007 | MS.gene65408:intron | 45.0% | |
| TTTGTGAATTGGGATCGGGA+TGG | - | chr4.3:88092987-88093006 | MS.gene65408:intron | 45.0% | |
| ! | AATTTGTTCTCCTCGTTCCC+TGG | - | chr4.3:88095698-88095717 | MS.gene65408:CDS | 45.0% |
| ! | ACAGCCACATTTTTGTCCTC+TGG | + | chr4.3:88091902-88091921 | None:intergenic | 45.0% |
| ! | ATTTACTGGGGGTATAGTGG+TGG | - | chr4.3:88094985-88095004 | MS.gene65408:intron | 45.0% |
| ! | CAGCCACATTTTTGTCCTCT+GGG | + | chr4.3:88091901-88091920 | None:intergenic | 45.0% |
| ! | GTTTTTGCTTGAGCAGAAGC+TGG | - | chr4.3:88092210-88092229 | MS.gene65408:intron | 45.0% |
| ! | TGGATTTACTGGGGGTATAG+TGG | - | chr4.3:88094982-88095001 | MS.gene65408:intron | 45.0% |
| ! | TTGCCTGAGTTGTTGGTTGT+TGG | - | chr4.3:88092480-88092499 | MS.gene65408:intron | 45.0% |
| !! | ACAAAGGTAGAGGTTGATGG+CGG | + | chr4.3:88095758-88095777 | None:intergenic | 45.0% |
| !! | CAAAGAGTGCCTATAAGCCA+TGG | + | chr4.3:88095165-88095184 | None:intergenic | 45.0% |
| !! | CCAACATCCCCATTTTGATC+TGG | - | chr4.3:88094586-88094605 | MS.gene65408:CDS | 45.0% |
| !! | GACCTTTTACTCGGTGACAT+GGG | - | chr4.3:88093684-88093703 | MS.gene65408:intron | 45.0% |
| !! | GGGGTATAGTGGTGGATTAT+CGG | - | chr4.3:88094993-88095012 | MS.gene65408:intron | 45.0% |
| !! | GGGTATAGTGGTGGATTATC+GGG | - | chr4.3:88094994-88095013 | MS.gene65408:intron | 45.0% |
| !! | GGGTTTTGTGAATTGGGATC+GGG | - | chr4.3:88092983-88093002 | MS.gene65408:intron | 45.0% |
| !! | TCTTAGGTGCTACTGCAGAT+TGG | - | chr4.3:88092447-88092466 | MS.gene65408:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAAATCA+GGG | + | chr4.3:88094665-88094684 | None:intergenic | 5.0% |
| !! | TAAAAAAAAAAAAAAAAATC+AGG | + | chr4.3:88094666-88094685 | None:intergenic | 5.0% |
| !!! | AAGTAATATATTTTTTATAT+TGG | - | chr4.3:88095462-88095481 | MS.gene65408:CDS | 5.0% |
| ACGGAGGTTGACAAAGGTAG+AGG | + | chr4.3:88095768-88095787 | None:intergenic | 50.0% | |
| AGATATCGCATTGGAGCGTG+AGG | - | chr4.3:88093653-88093672 | MS.gene65408:intron | 50.0% | |
| ATGGGAAATCCTCCCGAGTT+AGG | + | chr4.3:88095146-88095165 | None:intergenic | 50.0% | |
| CAATGTCGAGACCAACCCAA+TGG | + | chr4.3:88093517-88093536 | None:intergenic | 50.0% | |
| CAATGTGTCAGTGTCGTGTC+CGG | + | chr4.3:88093311-88093330 | None:intergenic | 50.0% | |
| CACAGAGAGTGGACACCATT+GGG | - | chr4.3:88093499-88093518 | MS.gene65408:intron | 50.0% | |
| CGACCCAGAGGACAAAAATG+TGG | - | chr4.3:88091895-88091914 | MS.gene65408:CDS | 50.0% | |
| CTTACTTAGGGGAGACCTGT+TGG | + | chr4.3:88092334-88092353 | None:intergenic | 50.0% | |
| GACATTGCACCCTCAATGCT+TGG | - | chr4.3:88093530-88093549 | MS.gene65408:intron | 50.0% | |
| GACCCATGTCACCGAGTAAA+AGG | + | chr4.3:88093689-88093708 | None:intergenic | 50.0% | |
| GGAATGTTTGATGGGGCCAT+CGG | - | chr4.3:88094383-88094402 | MS.gene65408:CDS | 50.0% | |
| GGTGAGGTAATCACAGAGAG+TGG | - | chr4.3:88093488-88093507 | MS.gene65408:intron | 50.0% | |
| GGTTGTTGGAGTACAACTGC+AGG | - | chr4.3:88092494-88092513 | MS.gene65408:intron | 50.0% | |
| GTTGAAACTCTCTTCTGCGC+AGG | + | chr4.3:88095628-88095647 | None:intergenic | 50.0% | |
| TAACTCGGGAGGATTTCCCA+TGG | - | chr4.3:88095145-88095164 | MS.gene65408:intron | 50.0% | |
| TCACAGAGAGTGGACACCAT+TGG | - | chr4.3:88093498-88093517 | MS.gene65408:intron | 50.0% | |
| TCCTATCGGACATGGACATG+TGG | - | chr4.3:88093362-88093381 | MS.gene65408:intron | 50.0% | |
| TCGGCTGCAGTTAAATACCG+AGG | + | chr4.3:88092830-88092849 | None:intergenic | 50.0% | |
| TCTTCTTCAACTCGACCCAG+AGG | - | chr4.3:88091883-88091902 | MS.gene65408:CDS | 50.0% | |
| TGGTCCTCACCGTGAAATGT+TGG | + | chr4.3:88092617-88092636 | None:intergenic | 50.0% | |
| TGTGAGTGTCCTATCGGACA+TGG | - | chr4.3:88093354-88093373 | MS.gene65408:intron | 50.0% | |
| TTCAATGACTGAGCGAGCAC+TGG | - | chr4.3:88093184-88093203 | MS.gene65408:intron | 50.0% | |
| TTTGGGCTTAGGGCCTAACT+CGG | - | chr4.3:88095130-88095149 | MS.gene65408:intron | 50.0% | |
| ! | CTCTGACTTGCCTGAGTTGT+TGG | - | chr4.3:88092473-88092492 | MS.gene65408:intron | 50.0% |
| ! | GTTGAGGGCGACCTTTTACT+CGG | - | chr4.3:88093675-88093694 | MS.gene65408:intron | 50.0% |
| ! | TTTACTCGGTGACATGGGTC+AGG | - | chr4.3:88093689-88093708 | MS.gene65408:intron | 50.0% |
| !! | CAGGGTTTAGGGCTTCGTTT+TGG | - | chr4.3:88094362-88094381 | MS.gene65408:intron | 50.0% |
| !! | CGACCTTTTACTCGGTGACA+TGG | - | chr4.3:88093683-88093702 | MS.gene65408:intron | 50.0% |
| !! | TAGTGGTGGATTATCGGGAC+AGG | - | chr4.3:88094999-88095018 | MS.gene65408:intron | 50.0% |
| AATAGCAGCTGTGGGCGATG+TGG | - | chr4.3:88095539-88095558 | MS.gene65408:intron | 55.0% | |
| ACTTCGGCAGTTAACTGCCG+AGG | + | chr4.3:88092771-88092790 | None:intergenic | 55.0% | |
| GAGAGTGGACACCATTGGGT+TGG | - | chr4.3:88093503-88093522 | MS.gene65408:intron | 55.0% | |
| GCATTGGAGCGTGAGGTTGA+GGG | - | chr4.3:88093660-88093679 | MS.gene65408:intron | 55.0% | |
| GCCACATGTCCATGTCCGAT+AGG | + | chr4.3:88093366-88093385 | None:intergenic | 55.0% | |
| GGTTGTGGATCGGGACTTAG+CGG | - | chr4.3:88093467-88093486 | MS.gene65408:intron | 55.0% | |
| TAGGGGAGACCTGTTGGATC+TGG | + | chr4.3:88092328-88092347 | None:intergenic | 55.0% | |
| TTGGGCTTAGGGCCTAACTC+GGG | - | chr4.3:88095131-88095150 | MS.gene65408:intron | 55.0% | |
| ! | TCTGGGACGGAGGTTGACAA+AGG | + | chr4.3:88095774-88095793 | None:intergenic | 55.0% |
| !! | GAAGAGCATTGCGCTGCTAC+AGG | - | chr4.3:88095670-88095689 | MS.gene65408:CDS | 55.0% |
| !! | TGGCTAGTCTCTGCCACACA+CGG | - | chr4.3:88095567-88095586 | MS.gene65408:intron | 55.0% |
| CGCATTGGAGCGTGAGGTTG+AGG | - | chr4.3:88093659-88093678 | MS.gene65408:intron | 60.0% | |
| CTAGTCTCTGCCACACACGG+CGG | - | chr4.3:88095570-88095589 | MS.gene65408:intron | 60.0% | |
| CTGTGGGCGATGTGGAACAG+TGG | - | chr4.3:88095547-88095566 | MS.gene65408:intron | 60.0% | |
| GGATGGGTCAAGACCAGAGG+CGG | - | chr4.3:88093004-88093023 | MS.gene65408:intron | 60.0% | |
| GGCTAAGAGTGGGTCTGGGA+CGG | + | chr4.3:88095787-88095806 | None:intergenic | 60.0% | |
| TCGGGATGGGTCAAGACCAG+AGG | - | chr4.3:88093001-88093020 | MS.gene65408:intron | 60.0% | |
| TGGATCGGGACTTAGCGGTG+AGG | - | chr4.3:88093472-88093491 | MS.gene65408:intron | 60.0% | |
| ! | TAAGAGTGGGTCTGGGACGG+AGG | + | chr4.3:88095784-88095803 | None:intergenic | 60.0% |
| !! | AGGTAGAGGTTGATGGCGGC+TGG | + | chr4.3:88095754-88095773 | None:intergenic | 60.0% |
| ACCAGAGGCGGTAGCTCCAC+CGG | - | chr4.3:88093016-88093035 | MS.gene65408:intron | 65.0% | |
| AGCCACTGTTCCGCCGTGTG+TGG | + | chr4.3:88095583-88095602 | None:intergenic | 65.0% | |
| ATGGAACGCCGGTGGCAACC+AGG | + | chr4.3:88095719-88095738 | None:intergenic | 65.0% | |
| CCTCGTTCCCTGGTTGCCAC+CGG | - | chr4.3:88095708-88095727 | MS.gene65408:CDS | 65.0% | |
| GATGGCAGGGGATGGAACGC+CGG | + | chr4.3:88095730-88095749 | None:intergenic | 65.0% | |
| GGCTTAGGGCCTAACTCGGG+AGG | - | chr4.3:88095134-88095153 | MS.gene65408:intron | 65.0% | |
| TGCCACACACGGCGGAACAG+TGG | - | chr4.3:88095578-88095597 | MS.gene65408:intron | 65.0% | |
| TGGAACGCCGGTGGCAACCA+GGG | + | chr4.3:88095718-88095737 | None:intergenic | 65.0% | |
| !! | AGGTTGATGGCGGCTGGCGA+TGG | + | chr4.3:88095748-88095767 | None:intergenic | 65.0% |
| ATGGCGGCTGGCGATGGCAG+GGG | + | chr4.3:88095742-88095761 | None:intergenic | 70.0% | |
| CCGGTGGCAACCAGGGAACG+AGG | + | chr4.3:88095711-88095730 | None:intergenic | 70.0% | |
| TCCGGTGGAGCTACCGCCTC+TGG | + | chr4.3:88093020-88093039 | None:intergenic | 70.0% | |
| ! | GATGGCGGCTGGCGATGGCA+GGG | + | chr4.3:88095743-88095762 | None:intergenic | 70.0% |
| !! | TGATGGCGGCTGGCGATGGC+AGG | + | chr4.3:88095744-88095763 | None:intergenic | 70.0% |
| CGGCTGGCGATGGCAGGGGA+TGG | + | chr4.3:88095738-88095757 | None:intergenic | 75.0% | |
| GGCAGGGGATGGAACGCCGG+TGG | + | chr4.3:88095727-88095746 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 88091823 | 88095809 | 88091823 | ID=MS.gene65408 |
| chr4.3 | mRNA | 88091823 | 88095809 | 88091823 | ID=MS.gene65408.t1;Parent=MS.gene65408 |
| chr4.3 | exon | 88095633 | 88095809 | 88095633 | ID=MS.gene65408.t1.exon1;Parent=MS.gene65408.t1 |
| chr4.3 | CDS | 88095633 | 88095809 | 88095633 | ID=cds.MS.gene65408.t1;Parent=MS.gene65408.t1 |
| chr4.3 | exon | 88095442 | 88095532 | 88095442 | ID=MS.gene65408.t1.exon2;Parent=MS.gene65408.t1 |
| chr4.3 | CDS | 88095442 | 88095532 | 88095442 | ID=cds.MS.gene65408.t1;Parent=MS.gene65408.t1 |
| chr4.3 | exon | 88094529 | 88094611 | 88094529 | ID=MS.gene65408.t1.exon3;Parent=MS.gene65408.t1 |
| chr4.3 | CDS | 88094529 | 88094611 | 88094529 | ID=cds.MS.gene65408.t1;Parent=MS.gene65408.t1 |
| chr4.3 | exon | 88094375 | 88094450 | 88094375 | ID=MS.gene65408.t1.exon4;Parent=MS.gene65408.t1 |
| chr4.3 | CDS | 88094375 | 88094450 | 88094375 | ID=cds.MS.gene65408.t1;Parent=MS.gene65408.t1 |
| chr4.3 | exon | 88094081 | 88094164 | 88094081 | ID=MS.gene65408.t1.exon5;Parent=MS.gene65408.t1 |
| chr4.3 | CDS | 88094081 | 88094164 | 88094081 | ID=cds.MS.gene65408.t1;Parent=MS.gene65408.t1 |
| chr4.3 | exon | 88093922 | 88093977 | 88093922 | ID=MS.gene65408.t1.exon6;Parent=MS.gene65408.t1 |
| chr4.3 | CDS | 88093922 | 88093977 | 88093922 | ID=cds.MS.gene65408.t1;Parent=MS.gene65408.t1 |
| chr4.3 | exon | 88093211 | 88093267 | 88093211 | ID=MS.gene65408.t1.exon7;Parent=MS.gene65408.t1 |
| chr4.3 | CDS | 88093211 | 88093267 | 88093211 | ID=cds.MS.gene65408.t1;Parent=MS.gene65408.t1 |
| chr4.3 | exon | 88092884 | 88092933 | 88092884 | ID=MS.gene65408.t1.exon8;Parent=MS.gene65408.t1 |
| chr4.3 | CDS | 88092884 | 88092933 | 88092884 | ID=cds.MS.gene65408.t1;Parent=MS.gene65408.t1 |
| chr4.3 | exon | 88092612 | 88092764 | 88092612 | ID=MS.gene65408.t1.exon9;Parent=MS.gene65408.t1 |
| chr4.3 | CDS | 88092612 | 88092764 | 88092612 | ID=cds.MS.gene65408.t1;Parent=MS.gene65408.t1 |
| chr4.3 | exon | 88091823 | 88091940 | 88091823 | ID=MS.gene65408.t1.exon10;Parent=MS.gene65408.t1 |
| chr4.3 | CDS | 88091823 | 88091940 | 88091823 | ID=cds.MS.gene65408.t1;Parent=MS.gene65408.t1 |
| Gene Sequence |
| Protein sequence |
