AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene65443


Find 259 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE



Chromosome Type Strat End Strand Name
chr1.1 gene 25586588 25594584 25586588 ID=MS.gene65443
chr1.1 mRNA 25586588 25594584 25586588 ID=MS.gene65443.t1;Parent=MS.gene65443
chr1.1 exon 25586588 25586646 25586588 ID=MS.gene65443.t1.exon1;Parent=MS.gene65443.t1
chr1.1 CDS 25586588 25586646 25586588 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25587420 25587599 25587420 ID=MS.gene65443.t1.exon2;Parent=MS.gene65443.t1
chr1.1 CDS 25587420 25587599 25587420 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25588171 25588291 25588171 ID=MS.gene65443.t1.exon3;Parent=MS.gene65443.t1
chr1.1 CDS 25588171 25588291 25588171 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25588371 25588428 25588371 ID=MS.gene65443.t1.exon4;Parent=MS.gene65443.t1
chr1.1 CDS 25588371 25588428 25588371 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25589089 25589141 25589089 ID=MS.gene65443.t1.exon5;Parent=MS.gene65443.t1
chr1.1 CDS 25589089 25589141 25589089 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25589220 25589275 25589220 ID=MS.gene65443.t1.exon6;Parent=MS.gene65443.t1
chr1.1 CDS 25589220 25589275 25589220 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25589643 25589795 25589643 ID=MS.gene65443.t1.exon7;Parent=MS.gene65443.t1
chr1.1 CDS 25589643 25589795 25589643 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25589940 25590106 25589940 ID=MS.gene65443.t1.exon8;Parent=MS.gene65443.t1
chr1.1 CDS 25589940 25590106 25589940 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25590880 25592138 25590880 ID=MS.gene65443.t1.exon9;Parent=MS.gene65443.t1
chr1.1 CDS 25590880 25592138 25590880 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25592249 25593085 25592249 ID=MS.gene65443.t1.exon10;Parent=MS.gene65443.t1
chr1.1 CDS 25592249 25593085 25592249 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25593161 25593193 25593161 ID=MS.gene65443.t1.exon11;Parent=MS.gene65443.t1
chr1.1 CDS 25593161 25593193 25593161 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25593793 25594177 25593793 ID=MS.gene65443.t1.exon12;Parent=MS.gene65443.t1
chr1.1 CDS 25593793 25594177 25593793 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25594352 25594417 25594352 ID=MS.gene65443.t1.exon13;Parent=MS.gene65443.t1
chr1.1 CDS 25594352 25594417 25594352 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
chr1.1 exon 25594514 25594584 25594514 ID=MS.gene65443.t1.exon14;Parent=MS.gene65443.t1
chr1.1 CDS 25594514 25594584 25594514 ID=cds.MS.gene65443.t1;Parent=MS.gene65443.t1
Gene Sequence

>MS.gene65443

ATGAACTCTTCAACAAGGTTGGATTCAGCTGTGTTTCAGCTCACACCAACTAGAACTAGGTAACATTCATCAATCAATTTTTTTTACTTCTTATTATGCTTCTTCCATTAACTTTATTTATAAATACTACTTTACAAAGAGAGATTGCAAGATATATATTTTTTGGTCTCAATGATTGTTCGATTCGGAGGTAAGTAAAGTCTTACCAATAATTGTTTCGGTCCGGATTTGAAAATGAGAGATTGATAAACAGTAGAGTTTTAATAGAAAAACAAATTAATATTTCATTTGATATTATAAAATGACTTATATCTAGCATATGAGATATTTGATTGTCATATGTAACAAATTCAAATTGGGATGGTTGCTATTTTGAGGAGTGATTAATTTATGGTAAAGTTGCTATTTATTTTTGTTTCTTTTATTTAATTGTCATGTGCATTGGTTGAGTTTTGTTTTCAAGTTTATTTTCATTGGTGACATTATGCCAACATGATTTTTGTTTTTGTAACTAGTGGTTGATGTAAGCATTTTCATTAGTGTAAATTTGGTACTTAGTTTTTTAATGTGCTTTAAATTGATCTAAGTTCTTTGGATATAATTAGCATAGTAACTGTATTGGTTATATATCCTTCAGTAATCGATGCTAGAAACCGAGTTTAAGAAATAAGGAAATTTACTGAGGGGTGTGTTGTGTTTATACATATGATCATATGATTTTTATGTCACTGATTGATGATTGATCAGTGTGATAGTTCACTGAAAACATTGGATGTATAGTATTTGCTACCTGATTTGTTGCTTTGATATTTCTCCCTTTTGTGTAAATTAGGTTTGATTTGGTCATAACTGTGAATGGAAAGAAGGAGAAAATTGCCTCAGGTTTGCTCAGCCCATTTCTATGCCACTTGAAGGCTGCTCAAGATCAAATGGATAAGGGTGGTTATTCAATTGTTCTTGTGCCTGAGAATGGATGCGATGTCACGTGGTTTACCAGGGGAACTATCGAAAGGTGTGGCTTGCTATCATATTTTTTTATTTGTTGATAATTCTTGTTGGCATATATTGGAATCAATGTTGTCAATTAGCGACTATAGCGTAGTGGAATTTTATCAAATCACTATTGTTTTCCATTACGCTATTTAGTACAAAGTGTTGTCAGATAGAGGCTATAGTGATGCTATAACACTGTAGCGTAGCAGAATTTGAAATAACAACCATTTTTGCAATCTGTGATTGACAACATTGCTTGGAATTTGAATTGATAGAGTTATTTTTTTGAGCGATTTAGAGGTTTGAGCTTATTGGTTGGTATTCTTTCTTATGTCCAATGCTATTTTAGAAGCCGTTTTTCATTTGTCGAAACATCTGTGAGAAAGTTCCCTTTAAGCCTATTTTGTTCTAGCTTTTTCCAAAGCAGAGGGATTTACTGGGGAAATGGCAGTGAAGCATTGCATTTGAAAGCTAAAACATAGATTAATCACTTATAACTCTAAGATTGGAAACTTAAAGTTTGTTGATTGTTCTCTTACAAATGTTTCGTATAAATGAGCATGCTGAATTAATTTTCTATGCTTCTATAGGTTTGTTCGGTTCGTTAGCACACCTGAGATACTGGAACGTGTATATACTATAGAATCTGAAATCTTACAAATTGAAGAGGCAATTGCAATTCAAGGAAATAATTCCATAGGGATTGGCACTGTAAGTAAATATCTAACAGCATTTTTAAATTCAACCACAACAATTAAATTGTTCATATTATTATCTTCTGTGCCTGTAGGTGGAAGAAAACCAAATAAAACAAGTGGAAAGCAATGAAGGGACTTTTGAAAGGACAGGTGCGTCTTATGCAAGTTATTGTTGTGTACAACAAGTTATTATTGTGTACAACTGTACCAACCAACTTGTATTAAACAAAAAACAGTATACATGTATATTAAAAGCTTTGCTGAAATTCATAATCTGATTGGATTAACAACTTAATTAAGGGCTTTTAGAATAAGCACTTATCATATAAGTGGTTTTGCATAAGATATTTCTATAATAAATAAAAGATAAAACAAAATCAATCTATTTTCATACAAGCTACTCCCTCCGTCCCGGTTTAATTGACCTACTTTGGTTTTTCACACAGATTAAGAAAAGTGTATAAATAAAGGGGAAAGTCGAATATATTGTATTGGGAATGATAAAAGTAGTATTATTTAGTGTTATATTGTATTGGGAATGATGAAAGTTGTATTGAAAATTGAAATGAGTCAGTTATTTTGGGACACTTTTTTTTAGAAAATGGGTCAGTTATTCCGGGACGGAGGGAGTATAAGCTGTTTTCATAAGTCATCCAGGAGAACCTATAGAAATAAGCTGAAAACAACTTATGAGCATGTTGTAAGTTGTTTTCGTAAGTACTCCTAAAGTCTCACAAGTGCTTAAGCCAGTCGATAAGCTCAAATAACTCAATCACAACAGGCCCTAAGAGAACTTGTTGCTTTTCTCAGGAAGGAAGATTAAGGAGGATAGTAATGTGGAGAAAGCAGTTGTTCCTTACAAGGTTGGAGGTCTTGAATTCCTAAACTTATATTGATTTATCATTTTCTAATCATAATCAGTCTGTGTGGATATGTCTCAGTCTGATACACAGCCGCCTGAAGCAAATGGAAGCACCTTGTCACAAGGAAAATCAAAGTAAATTCTAAATCTCAAAGTTCTTCTTTTATACAGAATGAGTATAGAATTTTAGTTGATGGTTTGCATAATTTATATGAAATTCATTAAGTGCCAATGGCAGACATGGATATCACTCGAGAAACTATTATTGATATGGTTGGAGCAACAAAAGCTAAGATGTCACCAACATGCCCAACTGCTTTATGATGAATAAAGTGACATTGGCAGAATTTTTGTATTTAAGCGTAGTTAAGCTAAAGATCTTATTTTCTACAAATGTAAAAGTGGTTTATTTTTTGTGTTGTATTCATTGAGCTACTTTTGACAATGCAAAACAGGTTGTTAACATCTGTGTCGTATTCACTTTCTTTACGTACTGTTTTAGAGTCCAGCTTTTGAGAGTCCTGGAGACACGTAAGTCGGTTCTGCAGAAAGAGCAAGGAATGGCATTTGCACGTGCTGTTGCTGCAGGTTTCGACATCGACTCCATACCGGCTTTGATGTCATTTGCTGAATGCTTTGAAGCGTCACGCTTGATGTAAGAATATTCTTCGTTCTCAACCATTTTTTACTTAATCATTGGTTAGTGCCTTAGTGAGATGCTGGATTCTTCACCATCTGGCCATTAAATGCATATTATTTCTGAACAATGTTGCAGATTCTAAATTTTTTCACATTTCAGGGATGCGTGTAGAAAATTCATGTCTCTATGGAAAAGAAAGCATGAGAGTGGCCTATGGCTTGAAATCGAAGCTTCTGAAGTGACACCTAATCGTGCAGACTTCTCTACAATAAATACATCCCACACTGAAATGGACTCAGAAAGTAACGGTGGGAAAACAAATTCAGGTACATGGCAACTCCAGCAAATTCTGATCTTGTAAATTCGTGAAGTCTTCATGACCTAAAGCATATCTTTGAAAATTCGTTAGTCATTACTCATTACTCACTGGTTGTTACTCTTTCTTACATGATTAAACCCTTACATATACATGCTTGGATCAAACTTAATTTTCACATTTAGAGAAGCTGTTTTTCTTTTCCTGTTATTAGCCTATACTTCAAAGAATCTAGAGCCATGTAAAGGTTTTTTGTTTTTTGTTTTTGGATAAATTAGTGGTCATGTTAGTTTCTAGGGTTTGTGCCCTGGGTCTCCTTCTTAAAATTCCTTCGGTTTCCCTTAGCTCACCAACCAAGCTACCTACGTGGGACTATGCGAAAGAATTATTAAGGTTTTCTTACTTTCATAAATGGACTAAGCGTAGAAACTTGTTTGAGGAAGATGTATTAAGTATATATAATATATCCCTAAAAAAAAAGTATATATAATATATAAGAGCAAGGGTGGTTTTGAAGCCACATAATCTTATAATGGTTTTTAGCTGCTCCGAAATTTCTGCAAATTTTGGTTTTAAAAGTTTGTCAATTTGATAGGTTTCCGTGGTTAGTGGAAGGAAGATTTAACTGGAGTTTTGTTGAAAGAAAATTTTAATGCTTCCTGCCAAGAATAATATATCTGGGCAAGAAAATTTCAGATGTTTATTTTTTTCTCCCCCTTAATGTACGTAGATTATTTTTCACATTTAAAGATATGTTTCATATGGACTAAAAACCAACTGCAGGAAACCAAGCTAATATTCAAGGTCAATTTTCTCATCATGGATTCTCCCCTTGGCCTGTTCATTCTCTCCCAGGTGCTTTGCCAGTGTTCCATCCTTATGCAGTCGAAGGCATACCCTACTATCCGACTTATCCAGGAAACAGTGCATTTATGCAGCCAGGTTGTCCGCCTATGGAGGATCCCCGACTACATGCTGATCAAAGTATTCGACACAGAAGACATTCCATGGATAATAGACACGGCAATACTGATTCCGAAAATTGGGACATTGAAACTTCAAAAACAAGTTTTAAGGATGAAATGGATATAGAGAGGGAAGGTTTACAGACTGGAGACCGAAGGAAGAAGACCAGTCGATCAGACAGACGTAAATCTAGCACGGTGGTCGTCCGAAATATCAATTACATAGCAAAGACTGAACATTCTTCTGGCAGTGAATCATATTCTGATTCTGCCACTGAAACCGAAGAAGTTCACAAATCTGTGAAGACCTCAAAAAGAAGAGGATCGGGTAAGGCATCTTTGAAGAGGTTGAATTCAACTGATAAGGAAGAAACAGACGGAGGACATTGGCAAGCATTCCAAAATTATTTATTGAAAGGTGTAGATGAAGATAGACATGCCATTAACCAAAACCAGTTTGAAATGGAAAAAGGTGATCACGTAAGAAGAAAAAAACATGTTGCAGCCAAAGATCCTTTAGATTTGACTGGTAAGTCACATCCTTCATCAGATGTGGCTGCTGTCAATGGACAATGTTATTCAAACACTGATTTGGAAAAGAAGTTGTTTCATAATGTGAATGATGACTCAATCATGGTTGAACACAGAGTCAATGATCCAGTAAATATTGAGGGAAATGCTATTGACATGGACTCCGAGTTCCCGAATGAAGGAAAACGGAAAATCTCCAATTATCAACCAGCTGAATTGAGCTTGTTGCCTGAAAGAGGAGCTGATAAAGGGTCAATGCGTTATGACTGTGCACTAGACTACAAAATGCAGGCCCAAAATGTAGGCGGTTCTTCACAGGATAAAAAGAACAAAGGGGCATTGGCTCATCACACCAAACCAAGATCTAAGATGTTGGATAAGGAGCAGAAATCAAAACCTACACCAAGTAGTTCTGATAGAAAAAAGACCGTTGGGCCAATAAGAAGGGGTAAACCGAATAAACCTAGTCCATTGGATGAAGCACGAGCACGTGCTGAAAGACTGCGTAACTACAAAGCAGATCTCCAAAAACTGAAGAAAGAGAAGGTACTCACTCAAGTTGAAGTAATTGGAAATTAAATTAACATTGTTTCAATTATGTTTACAATTAGATTAACAGATATACTTATTTATTTTCTATTATTTCTAATAATCAGGAAGAGGAAGATATAAAACGTATAGAGGCTTTAAAGAAGGAGAGACAAAAGAGAATCGCTGCTAGGAGTAGCTCAGTCACCAAACCAACCATCAAGTCAACCATGCCATCACTGCAAACAAAGAAACAGTTTCAAACAAAATTTTTGTCAACCGTGCATAAAGGATCAAAGTTTAGTGATTCAGAGCCAAGATCATCCTTACCCTTCCAAAGATTCCCTATCAGAACTGTTTCTGGTGGATCCAATGATTCTTTAAAACCCTCAAAAACCAGCAGACTGAGTACTGGCAGTAGCCACTCAGTTTCAAGCAAATTAAGGCGATCAGTGCCTCTTCTGCATGAACCTAAGCAAGAGAAGGGTGGTGCTGCAAACAATCCTAAGGCATCAATAACAATCAGTAGAAGATTCTCAGAACCTAAAATGAGTACCATTCGTCCGACTTCCTTAGTTAAACCACGGAGCTCTAGGACAATTTCAAGGACAAAAGCAGTTGATGAGACCGAGAGAAGAAAGATTTCTGCTATTGTGAATTATGATAAAGACAAGATTGCAACCCTTCCAGAACTGAAAATCAGAATATCTAAAGAGAAGACACAAAAGCTTAATGATGACAAGCCTTCTATGAATTCAGAAGGTGCCTTGCTGAAGAAAAGTGAAATTGAAATTTCAACCACTGATGATAGAGATGAAATTCCTATGATTGATAAGACTGTTGTGATGCTTGAGGGTGAAAAAAAACCCTGTGCCCTTGATATCAACGATGAGAAACCAAGAGGGAAAACAACGATAGCAAAGAGACAAGATGACAAAGATAAAGAAATGGAGAAAACTGAGAAAGTATCAAGTTGTACTGCTGTCTGTGCACTGGCTTCATCCTTAAGAACAAATATGGTACCCATAGGAACCTTGGAGAACCAATCACAAGTGAAGCACGTATCCTCGAAGGTGTGTCTTCATAACTAGAGTAGATTTATCATTGGTTAATTATTTTCATAGTTTATACTCTTTTATGTGTATTTTTTTCTTAAAAAATAAACTTCATAAACATGACCGTGAGTATGGTTATAAATGTCTTGTCTGCCTAACAGCATGTGATCTTTTTGAGTATTGCAGTCAACTTAGCCTGCAAGAGTTACGTTACTTGATATGTTTTCTATAGTTTATGCTTGGCTAAGCACAAGCATAGTACTGCAAATTTCTCAAATCTACATTCTCATTGTAAATTGTTAAAATTGCATCAGGACCTTAAACATTAGTCCACTTTCATAGATTTTTTCTCTTCCACCAATGCTTATATATAGAATTTGGATATGATATGGAGACGTGATGTCTATGTTCAATTCTTTGATTAGAAGAAATTAGCTGATATTTAATTTTAATTTCAGATATGTTATTTTTAGACCTTTAAGTTTAACAGTATTGGCAAGAAAATTGTAAATTGATTTATTGTTGACTACATGCTTGTGTTGTTTATTTGAATTCTGTGTATGGGAACAATTCTTAGTACTTCAGTTAATTTGGAATATATTATCTTCCAAATTCAGGTTAAAATGAATAATACAAAGAATGAACCTTCAAAATCATCATCTAGCAGTCACACTGCCGAGGAAACATCCCGCACCCCATATTCTCAAGGTTCTACTTTGGAAGATGGCCGTGCACGAAATTCTGAGTATGGTAAAGCACCTCCCACGAGCTTGGAAATTACATCAATCGGTATGGAGACTTTCAGAGCACACGTGTCTGACACCAGGAACTCTACACTTGAGAAAATTCCTGAGGTAAATGAGAATCCTCAGGTGAAGGACTCACCGAAAGGGTTAAGGCGGCTGTTAAAGTTTGGAAAAAAGAATCACAACTCAGCTACTGGGCACAATATGGAATCAGATCATGCCAATGAAATTGGAGTGAATGGTTCCACCAATGAAGGTAGTGTGATTCTTTCTGATCGCAATATATAGATATTCAATTTTTATGGCACTTTCTAAAATAGGTTATACAAAAGTTTAGAAAAATAATAATTTTTATGGCACTTTCATTTGTCATGTGACTAATATTACTCAACCTAACACCATCATATTTTGATTTGTTATGTTTTCTTAGCTCCCACTTTGAGGAATTTACTTTCTCGAGATGAAACTCTCTCAACCAACGCAACTCCTCAAAAGCGTAAGCAATTCAATTCATTTGAGAGAAAATTGAATCAACTCTTACTTGATCTTGACATCTGAATATGGACATGATAAATGTCTTTTTCTTTTACAGCTACTCGCTCTTTCTCCTTGTTATCGCCGTTTCGAAGCAACAGCCGAGAAAAAAAGATAATGACAACTTGA

Protein sequence

>MS.gene65443.t1

MNSSTRLDSAVFQLTPTRTRFDLVITVNGKKEKIASGLLSPFLCHLKAAQDQMDKGGYSIVLVPENGCDVTWFTRGTIERFVRFVSTPEILERVYTIESEILQIEEAIAIQGNNSIGIGTVEENQIKQVESNEGTFERTGRKIKEDSNVEKAVVPYKSDTQPPEANGSTLSQGKSKVQLLRVLETRKSVLQKEQGMAFARAVAAGFDIDSIPALMSFAECFEASRLMDACRKFMSLWKRKHESGLWLEIEASEVTPNRADFSTINTSHTEMDSESNGGKTNSGNQANIQGQFSHHGFSPWPVHSLPGALPVFHPYAVEGIPYYPTYPGNSAFMQPGCPPMEDPRLHADQSIRHRRHSMDNRHGNTDSENWDIETSKTSFKDEMDIEREGLQTGDRRKKTSRSDRRKSSTVVVRNINYIAKTEHSSGSESYSDSATETEEVHKSVKTSKRRGSGKASLKRLNSTDKEETDGGHWQAFQNYLLKGVDEDRHAINQNQFEMEKGDHVRRKKHVAAKDPLDLTGKSHPSSDVAAVNGQCYSNTDLEKKLFHNVNDDSIMVEHRVNDPVNIEGNAIDMDSEFPNEGKRKISNYQPAELSLLPERGADKGSMRYDCALDYKMQAQNVGGSSQDKKNKGALAHHTKPRSKMLDKEQKSKPTPSSSDRKKTVGPIRRGKPNKPSPLDEARARAERLRNYKADLQKLKKEKEEEDIKRIEALKKERQKRIAARSSSVTKPTIKSTMPSLQTKKQFQTKFLSTVHKGSKFSDSEPRSSLPFQRFPIRTVSGGSNDSLKPSKTSRLSTGSSHSVSSKLRRSVPLLHEPKQEKGGAANNPKASITISRRFSEPKMSTIRPTSLVKPRSSRTISRTKAVDETERRKISAIVNYDKDKIATLPELKIRISKEKTQKLNDDKPSMNSEGALLKKSEIEISTTDDRDEIPMIDKTVVMLEGEKKPCALDINDEKPRGKTTIAKRQDDKDKEMEKTEKNQSQVKHVSSKVKMNNTKNEPSKSSSSSHTAEETSRTPYSQGSTLEDGRARNSEYGKAPPTSLEITSIGMETFRAHVSDTRNSTLEKIPEVNENPQVKDSPKGLRRLLKFGKKNHNSATGHNMESDHANEIGVNGSTNEAPTLRNLLSRDETLSTNATPQKPTRSFSLLSPFRSNSREKKIMTT