Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67025.t1 | GAU47156.1 | 78.2 | 362 | 38 | 6 | 114 | 473 | 80 | 402 | 1.00E-136 | 496.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67025.t1 | Q9SF32 | 54.5 | 198 | 63 | 2 | 125 | 322 | 104 | 274 | 8.6e-47 | 189.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67025.t1 | A0A2Z6NUG8 | 78.2 | 362 | 38 | 6 | 114 | 473 | 80 | 402 | 7.5e-137 | 496.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053144 | MS.gene67025 | 0.800168 | 1.64E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67025.t1 | MTR_6g033415 | 91.372 | 452 | 13 | 2 | 23 | 473 | 1 | 427 | 0.0 | 831 |
MS.gene67025.t1 | MTR_7g100790 | 49.383 | 486 | 177 | 11 | 23 | 472 | 1 | 453 | 1.57e-120 | 360 |
MS.gene67025.t1 | MTR_1g095740 | 47.826 | 506 | 167 | 17 | 23 | 473 | 1 | 464 | 1.46e-112 | 341 |
MS.gene67025.t1 | MTR_1g066800 | 43.205 | 493 | 195 | 14 | 23 | 472 | 1 | 451 | 9.56e-104 | 317 |
MS.gene67025.t1 | MTR_1g066800 | 42.771 | 498 | 195 | 14 | 23 | 472 | 1 | 456 | 5.30e-103 | 316 |
MS.gene67025.t1 | MTR_4g087420 | 30.769 | 507 | 247 | 18 | 23 | 458 | 1 | 474 | 7.33e-50 | 178 |
MS.gene67025.t1 | MTR_8g024540 | 30.739 | 514 | 249 | 23 | 23 | 457 | 1 | 486 | 2.40e-41 | 155 |
MS.gene67025.t1 | MTR_4g050480 | 35.756 | 344 | 165 | 8 | 128 | 462 | 96 | 392 | 1.76e-40 | 150 |
MS.gene67025.t1 | MTR_4g050480 | 35.756 | 344 | 165 | 8 | 128 | 462 | 95 | 391 | 1.76e-40 | 150 |
MS.gene67025.t1 | MTR_3g096568 | 41.204 | 216 | 67 | 7 | 190 | 391 | 47 | 216 | 3.14e-35 | 134 |
MS.gene67025.t1 | MTR_0047s0040 | 29.594 | 419 | 213 | 12 | 25 | 435 | 4 | 348 | 3.32e-35 | 136 |
MS.gene67025.t1 | MTR_3g104570 | 39.336 | 211 | 94 | 3 | 126 | 329 | 88 | 271 | 4.47e-35 | 136 |
MS.gene67025.t1 | MTR_3g020990 | 51.701 | 147 | 37 | 2 | 142 | 287 | 103 | 216 | 2.02e-34 | 129 |
MS.gene67025.t1 | MTR_2g015370 | 36.041 | 197 | 92 | 6 | 128 | 322 | 62 | 226 | 1.60e-32 | 125 |
MS.gene67025.t1 | MTR_1g007920 | 33.025 | 324 | 171 | 7 | 122 | 435 | 90 | 377 | 6.39e-32 | 127 |
MS.gene67025.t1 | MTR_1g007920 | 33.229 | 319 | 167 | 7 | 127 | 435 | 120 | 402 | 1.14e-31 | 127 |
MS.gene67025.t1 | MTR_1g051810 | 31.765 | 425 | 201 | 15 | 23 | 437 | 1 | 346 | 2.28e-30 | 121 |
MS.gene67025.t1 | MTR_7g114700 | 28.953 | 449 | 212 | 17 | 23 | 435 | 1 | 378 | 3.14e-30 | 122 |
MS.gene67025.t1 | MTR_2g078210 | 32.500 | 200 | 105 | 4 | 123 | 321 | 8 | 178 | 4.27e-30 | 118 |
MS.gene67025.t1 | MTR_2g078210 | 32.500 | 200 | 105 | 4 | 123 | 321 | 68 | 238 | 6.61e-30 | 119 |
MS.gene67025.t1 | MTR_3g091560 | 36.943 | 314 | 135 | 10 | 23 | 315 | 1 | 272 | 1.89e-26 | 111 |
MS.gene67025.t1 | MTR_1g103070 | 53.086 | 81 | 38 | 0 | 114 | 194 | 121 | 201 | 1.15e-19 | 91.7 |
MS.gene67025.t1 | MTR_0019s0070 | 48.352 | 91 | 42 | 1 | 120 | 205 | 103 | 193 | 4.42e-19 | 90.1 |
MS.gene67025.t1 | MTR_2g099780 | 33.945 | 327 | 155 | 9 | 126 | 443 | 75 | 349 | 5.62e-19 | 89.4 |
MS.gene67025.t1 | MTR_1g101330 | 55.405 | 74 | 33 | 0 | 125 | 198 | 111 | 184 | 6.07e-19 | 89.4 |
MS.gene67025.t1 | MTR_8g102400 | 40.559 | 143 | 59 | 4 | 79 | 211 | 74 | 200 | 1.37e-18 | 88.2 |
MS.gene67025.t1 | MTR_2g100740 | 33.684 | 190 | 94 | 5 | 23 | 201 | 1 | 169 | 1.44e-18 | 87.4 |
MS.gene67025.t1 | MTR_4g108140 | 48.515 | 101 | 44 | 2 | 120 | 219 | 90 | 183 | 3.08e-18 | 87.8 |
MS.gene67025.t1 | MTR_4g108140 | 48.515 | 101 | 44 | 2 | 120 | 219 | 91 | 184 | 3.32e-18 | 87.8 |
MS.gene67025.t1 | MTR_8g014580 | 41.500 | 200 | 96 | 4 | 23 | 201 | 1 | 200 | 1.23e-17 | 85.1 |
MS.gene67025.t1 | MTR_8g017570 | 30.675 | 326 | 185 | 7 | 126 | 443 | 87 | 379 | 5.56e-17 | 83.6 |
MS.gene67025.t1 | MTR_8g074730 | 52.778 | 72 | 34 | 0 | 127 | 198 | 69 | 140 | 1.36e-16 | 77.0 |
MS.gene67025.t1 | MTR_1g066820 | 56.250 | 80 | 28 | 3 | 399 | 472 | 44 | 122 | 1.74e-15 | 73.6 |
MS.gene67025.t1 | MTR_7g114870 | 50.000 | 74 | 37 | 0 | 131 | 204 | 108 | 181 | 3.10e-15 | 77.8 |
MS.gene67025.t1 | MTR_0259s0040 | 80.000 | 60 | 10 | 1 | 51 | 110 | 31 | 88 | 3.40e-15 | 75.5 |
MS.gene67025.t1 | MTR_2g078480 | 33.182 | 220 | 100 | 7 | 190 | 409 | 47 | 219 | 8.64e-15 | 73.9 |
MS.gene67025.t1 | MTR_1g041430 | 35.000 | 140 | 73 | 4 | 43 | 181 | 41 | 163 | 5.47e-14 | 74.3 |
MS.gene67025.t1 | MTR_4g102840 | 32.934 | 167 | 89 | 3 | 23 | 187 | 1 | 146 | 1.19e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67025.t1 | AT5G03040 | 45.214 | 491 | 186 | 12 | 23 | 472 | 1 | 449 | 1.18e-113 | 343 |
MS.gene67025.t1 | AT5G03040 | 45.214 | 491 | 186 | 12 | 23 | 472 | 1 | 449 | 1.18e-113 | 343 |
MS.gene67025.t1 | AT5G03040 | 45.214 | 491 | 186 | 12 | 23 | 472 | 1 | 449 | 1.18e-113 | 343 |
MS.gene67025.t1 | AT3G52290 | 48.172 | 465 | 180 | 10 | 23 | 472 | 1 | 419 | 5.42e-109 | 330 |
MS.gene67025.t1 | AT3G09710 | 42.469 | 478 | 227 | 13 | 23 | 472 | 1 | 458 | 1.40e-85 | 271 |
MS.gene67025.t1 | AT3G09710 | 42.050 | 478 | 215 | 13 | 23 | 472 | 1 | 444 | 7.00e-83 | 263 |
MS.gene67025.t1 | AT2G26410 | 40.496 | 363 | 145 | 13 | 114 | 465 | 132 | 434 | 1.36e-62 | 212 |
MS.gene67025.t1 | AT2G26410 | 40.496 | 363 | 145 | 13 | 114 | 465 | 132 | 434 | 1.36e-62 | 212 |
MS.gene67025.t1 | AT2G26180 | 37.888 | 322 | 150 | 8 | 126 | 435 | 81 | 364 | 2.88e-43 | 158 |
MS.gene67025.t1 | AT3G59690 | 29.480 | 519 | 214 | 20 | 23 | 456 | 1 | 452 | 4.74e-41 | 154 |
MS.gene67025.t1 | AT3G59690 | 29.480 | 519 | 214 | 20 | 23 | 456 | 1 | 452 | 4.74e-41 | 154 |
MS.gene67025.t1 | AT3G22190 | 41.981 | 212 | 93 | 5 | 122 | 331 | 81 | 264 | 3.95e-39 | 147 |
MS.gene67025.t1 | AT3G22190 | 41.981 | 212 | 93 | 5 | 122 | 331 | 81 | 264 | 3.95e-39 | 147 |
MS.gene67025.t1 | AT3G22190 | 41.981 | 212 | 93 | 5 | 122 | 331 | 81 | 264 | 3.95e-39 | 147 |
MS.gene67025.t1 | AT3G22190 | 41.981 | 212 | 93 | 5 | 122 | 331 | 81 | 264 | 3.95e-39 | 147 |
MS.gene67025.t1 | AT2G43680 | 33.056 | 360 | 147 | 17 | 123 | 458 | 316 | 605 | 1.56e-35 | 140 |
MS.gene67025.t1 | AT2G43680 | 33.056 | 360 | 147 | 17 | 123 | 458 | 316 | 605 | 1.56e-35 | 140 |
MS.gene67025.t1 | AT2G43680 | 33.056 | 360 | 147 | 17 | 123 | 458 | 316 | 605 | 1.56e-35 | 140 |
MS.gene67025.t1 | AT2G43680 | 33.056 | 360 | 147 | 17 | 123 | 458 | 316 | 605 | 1.56e-35 | 140 |
MS.gene67025.t1 | AT2G43680 | 33.056 | 360 | 147 | 17 | 123 | 458 | 317 | 606 | 1.64e-35 | 140 |
MS.gene67025.t1 | AT2G33990 | 35.047 | 214 | 110 | 3 | 128 | 341 | 46 | 230 | 6.39e-35 | 131 |
MS.gene67025.t1 | AT1G01110 | 28.629 | 496 | 268 | 19 | 23 | 459 | 1 | 469 | 1.28e-34 | 136 |
MS.gene67025.t1 | AT3G49260 | 32.957 | 443 | 217 | 16 | 23 | 435 | 1 | 393 | 1.91e-33 | 132 |
MS.gene67025.t1 | AT1G72670 | 36.634 | 202 | 94 | 3 | 126 | 322 | 90 | 262 | 4.91e-33 | 130 |
MS.gene67025.t1 | AT4G00820 | 29.430 | 316 | 182 | 7 | 29 | 321 | 11 | 308 | 4.95e-33 | 131 |
MS.gene67025.t1 | AT3G49260 | 36.364 | 319 | 164 | 10 | 23 | 322 | 1 | 299 | 9.99e-33 | 130 |
MS.gene67025.t1 | AT3G49260 | 36.364 | 319 | 164 | 10 | 23 | 322 | 1 | 299 | 9.99e-33 | 130 |
MS.gene67025.t1 | AT3G49260 | 36.364 | 319 | 164 | 10 | 23 | 322 | 1 | 299 | 9.99e-33 | 130 |
MS.gene67025.t1 | AT3G15050 | 32.203 | 236 | 126 | 6 | 124 | 354 | 45 | 251 | 2.02e-30 | 119 |
MS.gene67025.t1 | AT5G13460 | 26.950 | 423 | 219 | 17 | 23 | 435 | 1 | 343 | 1.12e-27 | 115 |
MS.gene67025.t1 | AT4G10640 | 27.991 | 443 | 242 | 17 | 23 | 455 | 1 | 376 | 6.87e-27 | 112 |
MS.gene67025.t1 | AT1G17480 | 32.432 | 185 | 85 | 4 | 126 | 308 | 91 | 237 | 5.19e-21 | 94.7 |
MS.gene67025.t1 | AT1G18840 | 38.017 | 121 | 70 | 1 | 125 | 245 | 105 | 220 | 8.26e-20 | 92.8 |
MS.gene67025.t1 | AT1G18840 | 38.017 | 121 | 70 | 1 | 125 | 245 | 105 | 220 | 8.26e-20 | 92.8 |
MS.gene67025.t1 | AT1G18840 | 38.017 | 121 | 70 | 1 | 125 | 245 | 105 | 220 | 8.26e-20 | 92.8 |
MS.gene67025.t1 | AT5G03960 | 35.926 | 270 | 136 | 6 | 23 | 285 | 1 | 240 | 9.10e-20 | 91.7 |
MS.gene67025.t1 | AT5G03960 | 35.926 | 270 | 136 | 6 | 23 | 285 | 1 | 240 | 9.10e-20 | 91.7 |
MS.gene67025.t1 | AT4G14750 | 59.701 | 67 | 27 | 0 | 128 | 194 | 104 | 170 | 2.18e-19 | 90.1 |
MS.gene67025.t1 | AT4G14750 | 59.701 | 67 | 27 | 0 | 128 | 194 | 163 | 229 | 3.75e-19 | 90.1 |
MS.gene67025.t1 | AT4G14750 | 59.701 | 67 | 27 | 0 | 128 | 194 | 163 | 229 | 3.98e-19 | 90.1 |
MS.gene67025.t1 | AT5G03960 | 36.296 | 270 | 134 | 7 | 23 | 285 | 1 | 239 | 4.99e-19 | 89.4 |
MS.gene67025.t1 | AT3G16490 | 45.087 | 173 | 89 | 2 | 23 | 192 | 1 | 170 | 8.13e-18 | 85.5 |
MS.gene67025.t1 | AT3G51380 | 52.857 | 70 | 33 | 0 | 123 | 192 | 31 | 100 | 2.12e-16 | 75.1 |
MS.gene67025.t1 | AT5G07240 | 59.677 | 62 | 25 | 0 | 127 | 188 | 104 | 165 | 3.28e-15 | 77.8 |
MS.gene67025.t1 | AT5G07240 | 59.677 | 62 | 25 | 0 | 127 | 188 | 150 | 211 | 3.55e-15 | 77.8 |
MS.gene67025.t1 | AT3G49380 | 33.721 | 172 | 99 | 4 | 23 | 185 | 1 | 166 | 9.13e-15 | 75.9 |
MS.gene67025.t1 | AT4G29150 | 43.750 | 96 | 54 | 0 | 118 | 213 | 120 | 215 | 1.42e-14 | 75.9 |
MS.gene67025.t1 | AT1G74690 | 48.611 | 72 | 37 | 0 | 125 | 196 | 109 | 180 | 1.85e-14 | 76.3 |
MS.gene67025.t1 | AT5G62070 | 61.404 | 57 | 22 | 0 | 127 | 183 | 115 | 171 | 2.08e-14 | 75.5 |
MS.gene67025.t1 | AT4G23060 | 48.649 | 74 | 38 | 0 | 129 | 202 | 167 | 240 | 4.13e-14 | 74.7 |
MS.gene67025.t1 | AT1G51960 | 38.333 | 180 | 90 | 5 | 23 | 195 | 1 | 166 | 7.88e-14 | 73.2 |
MS.gene67025.t1 | AT1G14380 | 40.741 | 81 | 44 | 1 | 129 | 209 | 94 | 170 | 2.20e-12 | 69.7 |
MS.gene67025.t1 | AT1G14380 | 40.741 | 81 | 44 | 1 | 129 | 209 | 94 | 170 | 2.20e-12 | 69.7 |
MS.gene67025.t1 | AT1G14380 | 40.741 | 81 | 44 | 1 | 129 | 209 | 94 | 170 | 2.20e-12 | 69.7 |
MS.gene67025.t1 | AT5G35670 | 31.313 | 198 | 86 | 5 | 128 | 318 | 159 | 313 | 2.30e-12 | 69.3 |
MS.gene67025.t1 | AT1G14380 | 40.741 | 81 | 44 | 1 | 129 | 209 | 94 | 170 | 2.32e-12 | 69.7 |
MS.gene67025.t1 | AT1G14380 | 40.741 | 81 | 44 | 1 | 129 | 209 | 94 | 170 | 2.32e-12 | 69.7 |
MS.gene67025.t1 | AT1G14380 | 40.741 | 81 | 44 | 1 | 129 | 209 | 94 | 170 | 2.32e-12 | 69.7 |
MS.gene67025.t1 | AT1G14380 | 39.286 | 84 | 47 | 1 | 126 | 209 | 91 | 170 | 2.71e-12 | 69.3 |
Find 98 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTGCAAACCAAACATTTA+TGG | 0.169081 | 6.2:-23386026 | MS.gene67025:CDS |
TTTGCAACTGCTGCCGCGGC+AGG | 0.189741 | 6.2:-23387078 | MS.gene67025:CDS |
GACAGCGTTCCGCGGATATT+TGG | 0.239230 | 6.2:-23386950 | MS.gene67025:intron |
CGGACATTCGAATTCGTCTT+TGG | 0.254195 | 6.2:+23386417 | None:intergenic |
GGCAGCTGTTGCTGCGGCTC+AGG | 0.282011 | 6.2:-23387055 | MS.gene67025:CDS |
AATTCTTCCTTAATCTTTGT+AGG | 0.310365 | 6.2:+23386991 | None:intergenic |
TGCAACTGCTGCCGCGGCAG+GGG | 0.333388 | 6.2:-23387076 | MS.gene67025:CDS |
GTCAATTTAACGTCTTCTAT+TGG | 0.336181 | 6.2:+23387144 | None:intergenic |
TCATTATCCTACAAAGATTA+AGG | 0.336783 | 6.2:-23386998 | MS.gene67025:CDS |
CATCCCCAGTGAGGATTGTT+TGG | 0.337151 | 6.2:+23386001 | None:intergenic |
CGAAGATATAGCAGCATTGC+AGG | 0.343941 | 6.2:-23385710 | MS.gene67025:CDS |
TACAAAGATTAAGGAAGAAT+TGG | 0.351092 | 6.2:-23386989 | MS.gene67025:CDS |
TTGCAACTGCTGCCGCGGCA+GGG | 0.354153 | 6.2:-23387077 | MS.gene67025:CDS |
TGCGGCTCAGGCTGCTTTCG+AGG | 0.357501 | 6.2:-23387043 | MS.gene67025:CDS |
TACAACAGGTTGGAGAAGAT+TGG | 0.364807 | 6.2:-23386256 | MS.gene67025:CDS |
TTTGCATTTGTTGAAATATG+AGG | 0.376226 | 6.2:-23388033 | MS.gene67025:CDS |
TGGTATAAAATTTGTACAAC+AGG | 0.376872 | 6.2:-23386270 | MS.gene67025:CDS |
TAGAGTTTGCATGCATCTTA+AGG | 0.386769 | 6.2:+23386463 | None:intergenic |
TCGAATGTCCGAGGATAATC+AGG | 0.395298 | 6.2:-23386405 | MS.gene67025:CDS |
AAAGTAACAGGAATTACAAA+TGG | 0.396055 | 6.2:-23387910 | MS.gene67025:intron |
TGTTTGGATCCATAAATGTT+TGG | 0.400710 | 6.2:+23386017 | None:intergenic |
CGCAACATGCATTGTAGAAA+AGG | 0.401938 | 6.2:+23386301 | None:intergenic |
GTTTGATGGTCTTGCCTTTG+AGG | 0.405483 | 6.2:+23385796 | None:intergenic |
TTATCATAAAGAATATAATT+CGG | 0.409728 | 6.2:+23385881 | None:intergenic |
AACTCTTATATTTCCACCTT+AGG | 0.418842 | 6.2:+23385497 | None:intergenic |
TCTTTCCCTGCTTCTCCGGT+TGG | 0.432725 | 6.2:-23385542 | MS.gene67025:CDS |
CTTCAATTTCTGCGAGGAAG+AGG | 0.433391 | 6.2:-23385568 | MS.gene67025:CDS |
TTAATCTTTGTAGGATAATG+AGG | 0.439171 | 6.2:+23387000 | None:intergenic |
GGCCTATTCATTCTCACATC+AGG | 0.441857 | 6.2:-23386150 | MS.gene67025:intron |
CTTGCCTTTGAGGAAGTTGA+AGG | 0.449613 | 6.2:+23385806 | None:intergenic |
ATCTTCGATACCGTTCAGAT+TGG | 0.449859 | 6.2:+23385726 | None:intergenic |
TCTTCGATACCGTTCAGATT+GGG | 0.450074 | 6.2:+23385727 | None:intergenic |
GTTACGAGCCTTGAGAGGTT+TGG | 0.450589 | 6.2:-23386540 | MS.gene67025:CDS |
CTTGAACCAACCGGAGAAGC+AGG | 0.451320 | 6.2:+23385536 | None:intergenic |
GAATTACAAATGGGAAAGAA+AGG | 0.463694 | 6.2:-23387900 | MS.gene67025:CDS |
AGCAACAGCTGCCCCTGCCG+CGG | 0.466320 | 6.2:+23387065 | None:intergenic |
ACAACAGGTTGGAGAAGATT+GGG | 0.469622 | 6.2:-23386255 | MS.gene67025:CDS |
GCTTTCTTTCCCTGCTTCTC+CGG | 0.473746 | 6.2:-23385546 | MS.gene67025:CDS |
ATGCATGTTGCGAATTTGTC+TGG | 0.480768 | 6.2:-23386290 | MS.gene67025:CDS |
GCCGGTGTTTCCTAGTTACA+TGG | 0.484527 | 6.2:-23385651 | MS.gene67025:CDS |
TCTTATATTTCCACCTTAGG+TGG | 0.489664 | 6.2:+23385500 | None:intergenic |
CTAGTGAGTGCCATGTAACT+AGG | 0.490410 | 6.2:+23385641 | None:intergenic |
AATTTAACGTCTTCTATTGG+TGG | 0.502359 | 6.2:+23387147 | None:intergenic |
AGTTGAAGGAGAATTGTGTA+TGG | 0.503963 | 6.2:+23385820 | None:intergenic |
AAATGGGAAAGAAAGGGAGT+TGG | 0.513991 | 6.2:-23387893 | MS.gene67025:CDS |
CAAACAATCCTCACTGGGGA+TGG | 0.517079 | 6.2:-23386000 | MS.gene67025:CDS |
CTTCAAAAGAGAGAGGGCAT+TGG | 0.519119 | 6.2:-23386171 | MS.gene67025:CDS |
ATAAAATTTGTACAACAGGT+TGG | 0.519882 | 6.2:-23386266 | MS.gene67025:CDS |
TACAAGGACAATCTGTAAAA+CGG | 0.522962 | 6.2:-23386499 | MS.gene67025:CDS |
TGGATCCAAACAATCCTCAC+TGG | 0.524386 | 6.2:-23386006 | MS.gene67025:CDS |
GAGTGCCGTCTTGAACCAAC+CGG | 0.524726 | 6.2:+23385527 | None:intergenic |
CAACCTCACCAAACCTCTCA+AGG | 0.525908 | 6.2:+23386532 | None:intergenic |
GCAAGACCATCAAACTCAAA+AGG | 0.527499 | 6.2:-23385788 | MS.gene67025:CDS |
TTCTCCTTCAACTTCCTCAA+AGG | 0.538302 | 6.2:-23385810 | MS.gene67025:CDS |
TAGTGAAAAGGACTTAGAAG+TGG | 0.543476 | 6.2:-23387196 | MS.gene67025:CDS |
ATCCTCACTGGGGATGGAGT+TGG | 0.552928 | 6.2:-23385994 | MS.gene67025:CDS |
AAGTAACAGGAATTACAAAT+GGG | 0.554472 | 6.2:-23387909 | MS.gene67025:intron |
AATTACAAATGGGAAAGAAA+GGG | 0.554917 | 6.2:-23387899 | MS.gene67025:CDS |
GATGGAGTTGGTTAGAGAGA+TGG | 0.557483 | 6.2:-23385982 | MS.gene67025:CDS |
GGATGCAAGCTTGCAGTCGA+AGG | 0.561881 | 6.2:-23386234 | MS.gene67025:CDS |
TTCCTCGCAGAAATTGAAGA+TGG | 0.562596 | 6.2:+23385572 | None:intergenic |
TCTAGCAAGATTGCAGTCAC+AGG | 0.562836 | 6.2:-23386444 | MS.gene67025:CDS |
ACGGCACTCTGGTCCACCTA+AGG | 0.569009 | 6.2:-23385513 | MS.gene67025:CDS |
ATGGATGGCGACTCGACCAT+GGG | 0.572438 | 6.2:-23385963 | MS.gene67025:CDS |
TGTTACTCTAACAGCAAACA+TGG | 0.572451 | 6.2:-23386063 | MS.gene67025:intron |
GATAACAAACCTTCCCCAGT+TGG | 0.573359 | 6.2:-23385863 | MS.gene67025:CDS |
GATGGATGGCGACTCGACCA+TGG | 0.574503 | 6.2:-23385964 | MS.gene67025:CDS |
TAGCAGCATTGCAGGATCAT+CGG | 0.575373 | 6.2:-23385702 | MS.gene67025:CDS |
GCACTCTGGTCCACCTAAGG+TGG | 0.578255 | 6.2:-23385510 | MS.gene67025:CDS |
AGCTGCCTTCAAAAGAGAGA+GGG | 0.582684 | 6.2:-23386177 | MS.gene67025:CDS |
GGCAGGGGCAGCTGTTGCTG+CGG | 0.585664 | 6.2:-23387061 | MS.gene67025:CDS |
TCGAAGCAAAACTGTTGCAA+AGG | 0.587443 | 6.2:-23386205 | MS.gene67025:CDS |
TTGAAGAGCCTGATTATCCT+CGG | 0.592027 | 6.2:+23386397 | None:intergenic |
GGATCCAAACAATCCTCACT+GGG | 0.596104 | 6.2:-23386005 | MS.gene67025:CDS |
TACCTGATGTGAGAATGAAT+AGG | 0.596462 | 6.2:+23386148 | None:intergenic |
GTTGGTTCAAGACGGCACTC+TGG | 0.603753 | 6.2:-23385524 | MS.gene67025:CDS |
AGGATAATCAGGCTCTTCAA+CGG | 0.604236 | 6.2:-23386394 | MS.gene67025:CDS |
CTTCTCCGGTTGGTTCAAGA+CGG | 0.604624 | 6.2:-23385532 | MS.gene67025:CDS |
TCATGATTCCAGAAAAGACA+AGG | 0.609399 | 6.2:-23387844 | MS.gene67025:intron |
AAGATTCAGACAGCGTTCCG+CGG | 0.615353 | 6.2:-23386958 | MS.gene67025:CDS |
TGCAAGCGTTGAAAGCTCGC+CGG | 0.617551 | 6.2:-23385669 | MS.gene67025:CDS |
GAGCCTTGAGAGGTTTGGTG+AGG | 0.618158 | 6.2:-23386535 | MS.gene67025:CDS |
AGAGCGTTACGAGCCTTGAG+AGG | 0.620550 | 6.2:-23386545 | MS.gene67025:CDS |
AGGTTGAAGACAATGGTACA+AGG | 0.621615 | 6.2:-23386515 | MS.gene67025:CDS |
AAGCTGCCTTCAAAAGAGAG+AGG | 0.625961 | 6.2:-23386178 | MS.gene67025:CDS |
TTGAACCAACCGGAGAAGCA+GGG | 0.626362 | 6.2:+23385537 | None:intergenic |
GGCACTCACTAGTTCAGCAA+AGG | 0.627738 | 6.2:-23385630 | MS.gene67025:CDS |
TTTGGTGAGGTTGAAGACAA+TGG | 0.633377 | 6.2:-23386522 | MS.gene67025:CDS |
GAGTTGGTTAGAGAGATGGA+TGG | 0.646898 | 6.2:-23385978 | MS.gene67025:CDS |
TGTTTAGCGCCCAATCTGAA+CGG | 0.650668 | 6.2:-23385736 | MS.gene67025:CDS |
GCCATGTAACTAGGAAACAC+CGG | 0.650779 | 6.2:+23385650 | None:intergenic |
GCAGAAATTGAAGATGGTGA+CGG | 0.653887 | 6.2:+23385578 | None:intergenic |
CACCATCTTCAATTTCTGCG+AGG | 0.673030 | 6.2:-23385574 | MS.gene67025:CDS |
AAGACGAATTCGAATGTCCG+AGG | 0.677375 | 6.2:-23386414 | MS.gene67025:CDS |
AGAAGACGTTAAATTGACTG+AGG | 0.696100 | 6.2:-23387139 | MS.gene67025:CDS |
AACCAACTCCATCCCCAGTG+AGG | 0.702900 | 6.2:+23385992 | None:intergenic |
ACAATCATACCAAATATCCG+CGG | 0.712674 | 6.2:+23386941 | None:intergenic |
GATCCAAACAATCCTCACTG+GGG | 0.786047 | 6.2:-23386004 | MS.gene67025:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAATAAATAATTTTTTTT+TGG | + | chr6.2:23385816-23385835 | None:intergenic | 0.0% |
!! | TTATCATAAAGAATATAATT+CGG | + | chr6.2:23388297-23388316 | None:intergenic | 10.0% |
!! | AATTATCATCCATAAAAAAA+AGG | + | chr6.2:23386200-23386219 | None:intergenic | 15.0% |
!!! | ACTTTTAATCCTTTTTTTTA+TGG | - | chr6.2:23386188-23386207 | MS.gene67025:CDS | 15.0% |
!!! | ATAGTCTTTTTTAGAAAATT+AGG | - | chr6.2:23387476-23387495 | MS.gene67025:intron | 15.0% |
!!! | TATTTTGGATTTTATTATCT+TGG | - | chr6.2:23385639-23385658 | MS.gene67025:CDS | 15.0% |
!!! | TTTTAGAGATTTTTACTATA+TGG | - | chr6.2:23385731-23385750 | MS.gene67025:CDS | 15.0% |
!!! | TTTTTCTTGTTATAATTACA+AGG | - | chr6.2:23385831-23385850 | MS.gene67025:CDS | 15.0% |
!!! | TTTTTTTTATGGATGATAAT+TGG | - | chr6.2:23386199-23386218 | MS.gene67025:CDS | 15.0% |
!! | TAAGAAAAAAAGTAGTGAAA+AGG | - | chr6.2:23386967-23386986 | MS.gene67025:CDS | 20.0% |
!!! | AATCGATTTTTATGATTTGA+TGG | - | chr6.2:23386504-23386523 | MS.gene67025:CDS | 20.0% |
!!! | TTTTTACTATATGGATTTGA+TGG | - | chr6.2:23385740-23385759 | MS.gene67025:CDS | 20.0% |
! | AAACCATTATATATGCTTAC+AGG | + | chr6.2:23387600-23387619 | None:intergenic | 25.0% |
! | AAAGTAACAGGAATTACAAA+TGG | - | chr6.2:23386265-23386284 | MS.gene67025:CDS | 25.0% |
! | AAGTAACAGGAATTACAAAT+GGG | - | chr6.2:23386266-23386285 | MS.gene67025:CDS | 25.0% |
! | AATTACAAATGGGAAAGAAA+GGG | - | chr6.2:23386276-23386295 | MS.gene67025:CDS | 25.0% |
! | AATTCTTCCTTAATCTTTGT+AGG | + | chr6.2:23387187-23387206 | None:intergenic | 25.0% |
! | ATAAAATTTGTACAACAGGT+TGG | - | chr6.2:23387909-23387928 | MS.gene67025:intron | 25.0% |
! | TACAAAGATTAAGGAAGAAT+TGG | - | chr6.2:23387186-23387205 | MS.gene67025:CDS | 25.0% |
! | TACATTTCTCCATTGAATAT+TGG | - | chr6.2:23385668-23385687 | MS.gene67025:CDS | 25.0% |
! | TATATATGCTTACAGGTAAT+TGG | + | chr6.2:23387593-23387612 | None:intergenic | 25.0% |
! | TCATTATCCTACAAAGATTA+AGG | - | chr6.2:23387177-23387196 | MS.gene67025:CDS | 25.0% |
! | TCTCAAATTATTATCGTTGT+CGG | - | chr6.2:23386767-23386786 | MS.gene67025:intron | 25.0% |
! | TGGTATAAAATTTGTACAAC+AGG | - | chr6.2:23387905-23387924 | MS.gene67025:intron | 25.0% |
! | TTAATCTTTGTAGGATAATG+AGG | + | chr6.2:23387178-23387197 | None:intergenic | 25.0% |
! | TTACCTGTAAGCATATATAA+TGG | - | chr6.2:23387594-23387613 | MS.gene67025:intron | 25.0% |
! | TTATATTGAACCGAAATTTG+AGG | + | chr6.2:23388062-23388081 | None:intergenic | 25.0% |
!! | AAAGATTGGAGATTTTTACA+TGG | - | chr6.2:23385858-23385877 | MS.gene67025:CDS | 25.0% |
!! | AAGCATATATAATGGTTTTC+AGG | - | chr6.2:23387602-23387621 | MS.gene67025:intron | 25.0% |
!! | GACTTTTGGATTATGATATT+TGG | - | chr6.2:23385762-23385781 | MS.gene67025:CDS | 25.0% |
!! | GTGATTCATAATGATGTTTT+CGG | + | chr6.2:23388241-23388260 | None:intergenic | 25.0% |
!! | TTAAAAAACCTTGTCTTTTC+TGG | + | chr6.2:23386342-23386361 | None:intergenic | 25.0% |
!! | TTTGCATTTGTTGAAATATG+AGG | - | chr6.2:23386142-23386161 | MS.gene67025:intron | 25.0% |
!!! | TGAAGTTTTTTGCATTATTC+TGG | + | chr6.2:23388577-23388596 | None:intergenic | 25.0% |
AACCATTTATGTGTGTTCAT+TGG | - | chr6.2:23386919-23386938 | MS.gene67025:intron | 30.0% | |
AATTACAAGGCTTCAAAGAT+TGG | - | chr6.2:23385844-23385863 | MS.gene67025:CDS | 30.0% | |
AATTTAACGTCTTCTATTGG+TGG | + | chr6.2:23387031-23387050 | None:intergenic | 30.0% | |
ACCATTTATGTGTGTTCATT+GGG | - | chr6.2:23386920-23386939 | MS.gene67025:intron | 30.0% | |
ATCTGCAAACCAAACATTTA+TGG | - | chr6.2:23388149-23388168 | MS.gene67025:intron | 30.0% | |
CAAACGTTTCAGAAAATTTC+AGG | - | chr6.2:23387520-23387539 | MS.gene67025:intron | 30.0% | |
CACACATAAATGGTTTGAAT+TGG | + | chr6.2:23386914-23386933 | None:intergenic | 30.0% | |
CATGCAATTCCAATATTCAA+TGG | + | chr6.2:23385680-23385699 | None:intergenic | 30.0% | |
GAATTACAAATGGGAAAGAA+AGG | - | chr6.2:23386275-23386294 | MS.gene67025:CDS | 30.0% | |
GAATTATGTCATTGATCTGA+TGG | - | chr6.2:23386628-23386647 | MS.gene67025:intron | 30.0% | |
GTAATAGCTTGACTATCATT+TGG | + | chr6.2:23387284-23387303 | None:intergenic | 30.0% | |
GTCAATTTAACGTCTTCTAT+TGG | + | chr6.2:23387034-23387053 | None:intergenic | 30.0% | |
TACAAGGACAATCTGTAAAA+CGG | - | chr6.2:23387676-23387695 | MS.gene67025:intron | 30.0% | |
TGTTTGGATCCATAAATGTT+TGG | + | chr6.2:23388161-23388180 | None:intergenic | 30.0% | |
! | AGATCTGTTTCTTGTGTTTA+TGG | - | chr6.2:23386013-23386032 | MS.gene67025:CDS | 30.0% |
! | CTTCATATTGAAGGTGTATT+TGG | - | chr6.2:23387346-23387365 | MS.gene67025:intron | 30.0% |
! | TGTTTATGGTTTCTGTTTTG+AGG | - | chr6.2:23386027-23386046 | MS.gene67025:CDS | 30.0% |
!! | GTAATTCCTGTTACTTTGAA+AGG | + | chr6.2:23386262-23386281 | None:intergenic | 30.0% |
!!! | ATATGGATTTGATGGACTTT+TGG | - | chr6.2:23385748-23385767 | MS.gene67025:CDS | 30.0% |
AATGCCATGAGAAAATGAAG+AGG | + | chr6.2:23385791-23385810 | None:intergenic | 35.0% | |
ACAATCATACCAAATATCCG+CGG | + | chr6.2:23387237-23387256 | None:intergenic | 35.0% | |
ACCGATACTACCTCAAATTT+CGG | - | chr6.2:23388049-23388068 | MS.gene67025:intron | 35.0% | |
AGAAGACGTTAAATTGACTG+AGG | - | chr6.2:23387036-23387055 | MS.gene67025:CDS | 35.0% | |
AGTTGAAGGAGAATTGTGTA+TGG | + | chr6.2:23388358-23388377 | None:intergenic | 35.0% | |
CGTGTTTCATAGGTAATGAT+TGG | - | chr6.2:23386805-23386824 | MS.gene67025:intron | 35.0% | |
TACCTGATGTGAGAATGAAT+AGG | + | chr6.2:23388030-23388049 | None:intergenic | 35.0% | |
TAGAGTTTGCATGCATCTTA+AGG | + | chr6.2:23387715-23387734 | None:intergenic | 35.0% | |
TAGTGAAAAGGACTTAGAAG+TGG | - | chr6.2:23386979-23386998 | MS.gene67025:CDS | 35.0% | |
TCATGATTCCAGAAAAGACA+AGG | - | chr6.2:23386331-23386350 | MS.gene67025:CDS | 35.0% | |
TCCCAATGAACACACATAAA+TGG | + | chr6.2:23386924-23386943 | None:intergenic | 35.0% | |
TGAAAGGCAAAACAAGAACA+AGG | + | chr6.2:23386246-23386265 | None:intergenic | 35.0% | |
TGATGGTTATCTATGAAGCA+CGG | - | chr6.2:23386521-23386540 | MS.gene67025:CDS | 35.0% | |
TGTCAGTGCTACATGAAAAA+AGG | + | chr6.2:23387326-23387345 | None:intergenic | 35.0% | |
TGTTACTCTAACAGCAAACA+TGG | - | chr6.2:23388112-23388131 | MS.gene67025:intron | 35.0% | |
! | ACCGAAATTTGAGGTAGTAT+CGG | + | chr6.2:23388053-23388072 | None:intergenic | 35.0% |
! | GTTTCCTCTTCATTTTCTCA+TGG | - | chr6.2:23385784-23385803 | MS.gene67025:CDS | 35.0% |
! | GTTTTGCCTTTCAAAGTAAC+AGG | - | chr6.2:23386253-23386272 | MS.gene67025:CDS | 35.0% |
!! | ATTGAAGGTGTATTTGGTGT+CGG | - | chr6.2:23387352-23387371 | MS.gene67025:intron | 35.0% |
!! | TGGTTTGCCTTCTTGATTTT+TGG | + | chr6.2:23388338-23388357 | None:intergenic | 35.0% |
!!! | CTTTCACCTTTTGAGTTTGA+TGG | + | chr6.2:23388396-23388415 | None:intergenic | 35.0% |
!!! | TTCTTGATTTTTGGCCAACT+GGG | + | chr6.2:23388329-23388348 | None:intergenic | 35.0% |
AAATGGGAAAGAAAGGGAGT+TGG | - | chr6.2:23386282-23386301 | MS.gene67025:CDS | 40.0% | |
AATTAGGTGTCTCCTTGTGT+CGG | - | chr6.2:23386554-23386573 | MS.gene67025:CDS | 40.0% | |
AGGATAATCAGGCTCTTCAA+CGG | - | chr6.2:23387781-23387800 | MS.gene67025:intron | 40.0% | |
AGGTTGAAGACAATGGTACA+AGG | - | chr6.2:23387660-23387679 | MS.gene67025:intron | 40.0% | |
ATCTTCGATACCGTTCAGAT+TGG | + | chr6.2:23388452-23388471 | None:intergenic | 40.0% | |
ATGCATGTTGCGAATTTGTC+TGG | - | chr6.2:23387885-23387904 | MS.gene67025:CDS | 40.0% | |
CAGTTGGCCAAAAATCAAGA+AGG | - | chr6.2:23388328-23388347 | MS.gene67025:intron | 40.0% | |
CGCAACATGCATTGTAGAAA+AGG | + | chr6.2:23387877-23387896 | None:intergenic | 40.0% | |
GCAAGACCATCAAACTCAAA+AGG | - | chr6.2:23388387-23388406 | MS.gene67025:intron | 40.0% | |
GCAGAAATTGAAGATGGTGA+CGG | + | chr6.2:23388600-23388619 | None:intergenic | 40.0% | |
TCGAAGCAAAACTGTTGCAA+AGG | - | chr6.2:23387970-23387989 | MS.gene67025:intron | 40.0% | |
TCTTCGATACCGTTCAGATT+GGG | + | chr6.2:23388451-23388470 | None:intergenic | 40.0% | |
TGTAATCATCGATGTCGTGT+CGG | + | chr6.2:23386606-23386625 | None:intergenic | 40.0% | |
TGTAATCATCGATGTCGTGT+TGG | + | chr6.2:23386606-23386625 | None:intergenic | 40.0% | |
TTCCTCGCAGAAATTGAAGA+TGG | + | chr6.2:23388606-23388625 | None:intergenic | 40.0% | |
TTCTCCTTCAACTTCCTCAA+AGG | - | chr6.2:23388365-23388384 | MS.gene67025:intron | 40.0% | |
TTGAAGAGCCTGATTATCCT+CGG | + | chr6.2:23387781-23387800 | None:intergenic | 40.0% | |
TTTAGCGTTCGTGTCTACAT+CGG | - | chr6.2:23387447-23387466 | MS.gene67025:intron | 40.0% | |
TTTGGTGAGGTTGAAGACAA+TGG | - | chr6.2:23387653-23387672 | MS.gene67025:intron | 40.0% | |
! | ACAACAGGTTGGAGAAGATT+GGG | - | chr6.2:23387920-23387939 | MS.gene67025:intron | 40.0% |
! | AGGCTATGTTGCAGTTTTTG+TGG | - | chr6.2:23386047-23386066 | MS.gene67025:CDS | 40.0% |
! | GCACTGACACTTCATATTGA+AGG | - | chr6.2:23387337-23387356 | MS.gene67025:intron | 40.0% |
! | TACAACAGGTTGGAGAAGAT+TGG | - | chr6.2:23387919-23387938 | MS.gene67025:intron | 40.0% |
!!! | CTTCTTGATTTTTGGCCAAC+TGG | + | chr6.2:23388330-23388349 | None:intergenic | 40.0% |
!!! | TCTTGATTTTTGGCCAACTG+GGG | + | chr6.2:23388328-23388347 | None:intergenic | 40.0% |
AAGACGAATTCGAATGTCCG+AGG | - | chr6.2:23387761-23387780 | MS.gene67025:intron | 45.0% | |
AAGCTGCCTTCAAAAGAGAG+AGG | - | chr6.2:23387997-23388016 | MS.gene67025:intron | 45.0% | |
ACAAGGAGACACCTAATTCG+AGG | + | chr6.2:23386552-23386571 | None:intergenic | 45.0% | |
AGCTGCCTTCAAAAGAGAGA+GGG | - | chr6.2:23387998-23388017 | MS.gene67025:intron | 45.0% | |
CACCATCTTCAATTTCTGCG+AGG | - | chr6.2:23388601-23388620 | MS.gene67025:intron | 45.0% | |
CGAAGATATAGCAGCATTGC+AGG | - | chr6.2:23388465-23388484 | MS.gene67025:intron | 45.0% | |
CGGACATTCGAATTCGTCTT+TGG | + | chr6.2:23387761-23387780 | None:intergenic | 45.0% | |
CTAGTGAGTGCCATGTAACT+AGG | + | chr6.2:23388537-23388556 | None:intergenic | 45.0% | |
CTTCAATTTCTGCGAGGAAG+AGG | - | chr6.2:23388607-23388626 | MS.gene67025:intron | 45.0% | |
GATAACAAACCTTCCCCAGT+TGG | - | chr6.2:23388312-23388331 | MS.gene67025:intron | 45.0% | |
GATCCAAACAATCCTCACTG+GGG | - | chr6.2:23388171-23388190 | MS.gene67025:intron | 45.0% | |
GCACAGATACTCCTCGAATT+AGG | - | chr6.2:23386662-23386681 | MS.gene67025:intron | 45.0% | |
GCCATGTAACTAGGAAACAC+CGG | + | chr6.2:23388528-23388547 | None:intergenic | 45.0% | |
GGATCCAAACAATCCTCACT+GGG | - | chr6.2:23388170-23388189 | MS.gene67025:intron | 45.0% | |
GGCCTATTCATTCTCACATC+AGG | - | chr6.2:23388025-23388044 | MS.gene67025:CDS | 45.0% | |
TAGCAGCATTGCAGGATCAT+CGG | - | chr6.2:23388473-23388492 | MS.gene67025:intron | 45.0% | |
TCGAATGTCCGAGGATAATC+AGG | - | chr6.2:23387770-23387789 | MS.gene67025:intron | 45.0% | |
TCTAGCAAGATTGCAGTCAC+AGG | - | chr6.2:23387731-23387750 | MS.gene67025:intron | 45.0% | |
TGGATCCAAACAATCCTCAC+TGG | - | chr6.2:23388169-23388188 | MS.gene67025:intron | 45.0% | |
TGTTTAGCGCCCAATCTGAA+CGG | - | chr6.2:23388439-23388458 | MS.gene67025:intron | 45.0% | |
! | ATGATGTTTTCGGCTTCCCA+TGG | + | chr6.2:23388231-23388250 | None:intergenic | 45.0% |
! | CAATGCCCTCTCTCTTTTGA+AGG | + | chr6.2:23388006-23388025 | None:intergenic | 45.0% |
! | CTTCAAAAGAGAGAGGGCAT+TGG | - | chr6.2:23388004-23388023 | MS.gene67025:intron | 45.0% |
! | CTTGCCTTTGAGGAAGTTGA+AGG | + | chr6.2:23388372-23388391 | None:intergenic | 45.0% |
! | GAGTTGGTTAGAGAGATGGA+TGG | - | chr6.2:23388197-23388216 | MS.gene67025:intron | 45.0% |
! | GATGGAGTTGGTTAGAGAGA+TGG | - | chr6.2:23388193-23388212 | MS.gene67025:intron | 45.0% |
! | GTTTGATGGTCTTGCCTTTG+AGG | + | chr6.2:23388382-23388401 | None:intergenic | 45.0% |
!!! | TTATTTATTTTTTACTATTT+TGG | - | chr6.2:23385624-23385643 | MS.gene67025:CDS | 5.0% |
!!! | TTGTTTTTTAATTATTTATT+TGG | - | chr6.2:23387258-23387277 | MS.gene67025:intron | 5.0% |
AAGATTCAGACAGCGTTCCG+CGG | - | chr6.2:23387217-23387236 | MS.gene67025:CDS | 50.0% | |
CAAACAATCCTCACTGGGGA+TGG | - | chr6.2:23388175-23388194 | MS.gene67025:intron | 50.0% | |
CAACCTCACCAAACCTCTCA+AGG | + | chr6.2:23387646-23387665 | None:intergenic | 50.0% | |
CATCCCCAGTGAGGATTGTT+TGG | + | chr6.2:23388177-23388196 | None:intergenic | 50.0% | |
GCCGGTGTTTCCTAGTTACA+TGG | - | chr6.2:23388524-23388543 | MS.gene67025:intron | 50.0% | |
GCTTTCTTTCCCTGCTTCTC+CGG | - | chr6.2:23388629-23388648 | MS.gene67025:intron | 50.0% | |
GGCACTCACTAGTTCAGCAA+AGG | - | chr6.2:23388545-23388564 | MS.gene67025:intron | 50.0% | |
GTGTCGTGCTCGTGTTTCAT+AGG | - | chr6.2:23386795-23386814 | MS.gene67025:intron | 50.0% | |
GTTACGAGCCTTGAGAGGTT+TGG | - | chr6.2:23387635-23387654 | MS.gene67025:intron | 50.0% | |
TTGAACCAACCGGAGAAGCA+GGG | + | chr6.2:23388641-23388660 | None:intergenic | 50.0% | |
! | CATCGATGTCGTGTTGGTGT+CGG | + | chr6.2:23386724-23386743 | None:intergenic | 50.0% |
! | CTTCTCCGGTTGGTTCAAGA+CGG | - | chr6.2:23388643-23388662 | MS.gene67025:intron | 50.0% |
!! | TATTTGGTGTCGGACACACG+TGG | - | chr6.2:23387362-23387381 | MS.gene67025:intron | 50.0% |
!!! | GATTTTTGGCCAACTGGGGA+AGG | + | chr6.2:23388324-23388343 | None:intergenic | 50.0% |
AACCAACTCCATCCCCAGTG+AGG | + | chr6.2:23388186-23388205 | None:intergenic | 55.0% | |
ATCCTCACTGGGGATGGAGT+TGG | - | chr6.2:23388181-23388200 | MS.gene67025:intron | 55.0% | |
ATGGATGGCGACTCGACCAT+GGG | - | chr6.2:23388212-23388231 | MS.gene67025:intron | 55.0% | |
CTTGAACCAACCGGAGAAGC+AGG | + | chr6.2:23388642-23388661 | None:intergenic | 55.0% | |
GACAGCGTTCCGCGGATATT+TGG | - | chr6.2:23387225-23387244 | MS.gene67025:CDS | 55.0% | |
GCACGGACACTCCTCGAATT+AGG | - | chr6.2:23386538-23386557 | MS.gene67025:CDS | 55.0% | |
GGATGCAAGCTTGCAGTCGA+AGG | - | chr6.2:23387941-23387960 | MS.gene67025:intron | 55.0% | |
TCCTTGTGTCGAACACGCGT+CGG | - | chr6.2:23386565-23386584 | MS.gene67025:intron | 55.0% | |
TCTTTCCCTGCTTCTCCGGT+TGG | - | chr6.2:23388633-23388652 | MS.gene67025:intron | 55.0% | |
! | AGAGCGTTACGAGCCTTGAG+AGG | - | chr6.2:23387630-23387649 | MS.gene67025:intron | 55.0% |
! | CATCGATGTCGTGTCGGTGT+CGG | + | chr6.2:23386600-23386619 | None:intergenic | 55.0% |
! | GAGTGCCGTCTTGAACCAAC+CGG | + | chr6.2:23388651-23388670 | None:intergenic | 55.0% |
! | GTTGGTTCAAGACGGCACTC+TGG | - | chr6.2:23388651-23388670 | MS.gene67025:intron | 55.0% |
! | TGCTTTTGCAACTGCTGCCG+CGG | - | chr6.2:23387093-23387112 | MS.gene67025:CDS | 55.0% |
!! | GAGCCTTGAGAGGTTTGGTG+AGG | - | chr6.2:23387640-23387659 | MS.gene67025:intron | 55.0% |
!! | TGCAAGCGTTGAAAGCTCGC+CGG | - | chr6.2:23388506-23388525 | MS.gene67025:intron | 55.0% |
ACCGACGCGTGTTCGACACA+AGG | + | chr6.2:23386569-23386588 | None:intergenic | 60.0% | |
ACGGCACTCTGGTCCACCTA+AGG | - | chr6.2:23388662-23388681 | MS.gene67025:intron | 60.0% | |
GATGGATGGCGACTCGACCA+TGG | - | chr6.2:23388211-23388230 | MS.gene67025:intron | 60.0% | |
GCACTCTGGTCCACCTAAGG+TGG | - | chr6.2:23388665-23388684 | MS.gene67025:intron | 60.0% | |
TCCTTGTGTCGGACACGCGT+CGG | - | chr6.2:23386689-23386708 | MS.gene67025:intron | 60.0% | |
ACCGACGCGTGTCCGACACA+AGG | + | chr6.2:23386693-23386712 | None:intergenic | 65.0% | |
TTGCAACTGCTGCCGCGGCA+GGG | - | chr6.2:23387098-23387117 | MS.gene67025:CDS | 65.0% | |
TTTGCAACTGCTGCCGCGGC+AGG | - | chr6.2:23387097-23387116 | MS.gene67025:CDS | 65.0% | |
! | TGCGGCTCAGGCTGCTTTCG+AGG | - | chr6.2:23387132-23387151 | MS.gene67025:CDS | 65.0% |
AGCAACAGCTGCCCCTGCCG+CGG | + | chr6.2:23387113-23387132 | None:intergenic | 70.0% | |
GGCAGCTGTTGCTGCGGCTC+AGG | - | chr6.2:23387120-23387139 | MS.gene67025:CDS | 70.0% | |
GGCAGGGGCAGCTGTTGCTG+CGG | - | chr6.2:23387114-23387133 | MS.gene67025:CDS | 70.0% | |
TGCAACTGCTGCCGCGGCAG+GGG | - | chr6.2:23387099-23387118 | MS.gene67025:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 23385502 | 23388695 | 23385502 | ID=MS.gene67025 |
chr6.2 | mRNA | 23385502 | 23388695 | 23385502 | ID=MS.gene67025.t1;Parent=MS.gene67025 |
chr6.2 | exon | 23388688 | 23388695 | 23388688 | ID=MS.gene67025.t1.exon1;Parent=MS.gene67025.t1 |
chr6.2 | CDS | 23388688 | 23388695 | 23388688 | ID=cds.MS.gene67025.t1;Parent=MS.gene67025.t1 |
chr6.2 | exon | 23388016 | 23388064 | 23388016 | ID=MS.gene67025.t1.exon2;Parent=MS.gene67025.t1 |
chr6.2 | CDS | 23388016 | 23388064 | 23388016 | ID=cds.MS.gene67025.t1;Parent=MS.gene67025.t1 |
chr6.2 | exon | 23387845 | 23387922 | 23387845 | ID=MS.gene67025.t1.exon3;Parent=MS.gene67025.t1 |
chr6.2 | CDS | 23387845 | 23387922 | 23387845 | ID=cds.MS.gene67025.t1;Parent=MS.gene67025.t1 |
chr6.2 | exon | 23386951 | 23387244 | 23386951 | ID=MS.gene67025.t1.exon4;Parent=MS.gene67025.t1 |
chr6.2 | CDS | 23386951 | 23387244 | 23386951 | ID=cds.MS.gene67025.t1;Parent=MS.gene67025.t1 |
chr6.2 | exon | 23386151 | 23386573 | 23386151 | ID=MS.gene67025.t1.exon5;Parent=MS.gene67025.t1 |
chr6.2 | CDS | 23386151 | 23386573 | 23386151 | ID=cds.MS.gene67025.t1;Parent=MS.gene67025.t1 |
chr6.2 | exon | 23385502 | 23386071 | 23385502 | ID=MS.gene67025.t1.exon6;Parent=MS.gene67025.t1 |
chr6.2 | CDS | 23385502 | 23386071 | 23385502 | ID=cds.MS.gene67025.t1;Parent=MS.gene67025.t1 |
Gene Sequence |
Protein sequence |