AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67061

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67061.t1 MTR_3g107320 96.348 794 29 0 3 796 33 826 0.0 1604
MS.gene67061.t1 MTR_3g107360 71.286 801 209 10 6 796 33 822 0.0 1178
MS.gene67061.t1 MTR_4g010650 65.038 798 255 9 9 796 25 808 0.0 1065
MS.gene67061.t1 MTR_2g103730 65.918 801 244 10 9 796 25 809 0.0 1061
MS.gene67061.t1 MTR_7g075910 47.601 771 366 15 36 785 351 1104 0.0 706
MS.gene67061.t1 MTR_8g033080 47.287 774 369 16 36 785 281 1039 0.0 702
MS.gene67061.t1 MTR_8g088690 45.185 810 374 16 27 796 63 842 0.0 683
MS.gene67061.t1 MTR_3g114840 45.511 802 387 17 29 796 66 851 0.0 680
MS.gene67061.t1 MTR_5g011050 45.290 775 379 17 36 785 90 844 0.0 665
MS.gene67061.t1 MTR_5g023050 42.138 814 405 15 29 796 79 872 0.0 659
MS.gene67061.t1 MTR_5g011060 44.689 772 388 16 36 785 84 838 0.0 656
MS.gene67061.t1 MTR_2g100250 44.156 770 380 17 32 796 32 756 0.0 622
MS.gene67061.t1 MTR_3g114840 44.823 705 344 14 29 699 66 759 0.0 586
MS.gene67061.t1 MTR_8g016160 41.371 788 395 22 14 796 20 745 0.0 559
MS.gene67061.t1 MTR_8g033080 46.679 557 267 11 36 573 281 826 8.35e-163 493
MS.gene67061.t1 MTR_1g083620 31.727 249 133 11 481 719 477 698 9.40e-22 101
MS.gene67061.t1 MTR_1g083620 31.064 235 119 9 187 408 120 324 9.57e-18 88.6
MS.gene67061.t1 MTR_1g083620 31.727 249 133 11 481 719 737 958 1.22e-21 101
MS.gene67061.t1 MTR_1g083620 31.064 235 119 9 187 408 380 584 6.45e-18 89.4
MS.gene67061.t1 MTR_2g435560 32.836 201 103 6 481 676 647 820 1.73e-19 94.4
MS.gene67061.t1 MTR_2g435560 29.134 254 126 10 187 419 246 466 1.50e-16 84.7
MS.gene67061.t1 MTR_2g435560 32.836 201 103 6 481 676 782 955 2.16e-19 94.4
MS.gene67061.t1 MTR_2g435560 29.134 254 126 10 187 419 381 601 1.15e-16 85.5
MS.gene67061.t1 MTR_5g023040 50.000 68 30 1 305 372 806 869 1.50e-15 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67061.t1 AT3G15730 63.945 796 262 9 16 796 25 810 0.0 1055
MS.gene67061.t1 AT1G52570 63.892 781 260 10 29 796 39 810 0.0 1029
MS.gene67061.t1 AT1G52570 63.892 781 260 10 29 796 39 810 0.0 1029
MS.gene67061.t1 AT1G52570 63.892 781 260 10 29 796 39 810 0.0 1029
MS.gene67061.t1 AT5G25370 62.078 799 287 11 3 796 33 820 0.0 990
MS.gene67061.t1 AT5G25370 62.078 799 287 11 3 796 33 820 0.0 990
MS.gene67061.t1 AT5G25370 62.078 799 287 11 3 796 33 820 0.0 990
MS.gene67061.t1 AT5G25370 63.588 747 260 9 55 796 6 745 0.0 959
MS.gene67061.t1 AT4G11830 46.332 777 373 18 36 785 87 846 0.0 700
MS.gene67061.t1 AT4G11830 46.332 777 373 18 36 785 55 814 0.0 699
MS.gene67061.t1 AT4G11840 45.641 780 375 16 36 785 96 856 0.0 687
MS.gene67061.t1 AT2G42010 45.584 770 384 14 36 785 319 1073 0.0 687
MS.gene67061.t1 AT4G00240 45.714 770 383 14 36 785 128 882 0.0 679
MS.gene67061.t1 AT4G00240 45.714 770 383 14 36 785 11 765 0.0 679
MS.gene67061.t1 AT2G42010 44.780 795 379 16 36 785 319 1098 0.0 679
MS.gene67061.t1 AT4G00240 45.714 770 383 14 36 785 163 917 0.0 678
MS.gene67061.t1 AT4G11850 44.760 811 396 18 1 785 64 848 0.0 676
MS.gene67061.t1 AT4G11840 45.232 776 354 15 36 785 96 826 0.0 674
MS.gene67061.t1 AT4G35790 43.548 806 396 13 29 796 73 857 0.0 669
MS.gene67061.t1 AT4G35790 43.207 817 394 14 29 796 73 868 0.0 663
MS.gene67061.t1 AT1G55180 42.351 791 389 22 19 796 4 740 0.0 611
MS.gene67061.t1 AT1G55180 42.132 788 390 21 20 796 30 762 0.0 604
MS.gene67061.t1 AT4G35790 42.233 618 310 8 29 610 73 679 7.69e-168 501
MS.gene67061.t1 AT4G11830 45.811 561 275 11 36 580 87 634 4.82e-166 495
MS.gene67061.t1 AT4G11830 46.140 544 264 11 36 563 87 617 1.36e-161 483
MS.gene67061.t1 AT3G05630 28.099 726 352 31 113 741 304 956 4.30e-44 172
MS.gene67061.t1 AT3G16785 35.961 203 96 7 480 676 756 930 6.96e-22 102
MS.gene67061.t1 AT3G16785 31.250 224 102 8 202 408 389 577 4.50e-18 90.1
MS.gene67061.t1 AT3G16785 35.961 203 96 7 480 676 756 930 6.96e-22 102
MS.gene67061.t1 AT3G16785 31.250 224 102 8 202 408 389 577 4.50e-18 90.1
MS.gene67061.t1 AT3G16785 35.961 203 96 7 480 676 756 930 7.16e-22 102
MS.gene67061.t1 AT3G16785 31.250 224 102 8 202 408 389 577 3.92e-18 90.1
MS.gene67061.t1 AT3G16785 35.961 203 96 7 480 676 756 930 7.16e-22 102
MS.gene67061.t1 AT3G16785 31.250 224 102 8 202 408 389 577 3.92e-18 90.1
MS.gene67061.t1 AT3G16785 35.961 203 96 7 480 676 756 930 7.30e-22 102
MS.gene67061.t1 AT3G16785 31.250 224 102 8 202 408 389 577 4.05e-18 90.1
MS.gene67061.t1 AT3G16785 35.961 203 96 7 480 676 756 930 8.64e-22 102
MS.gene67061.t1 AT3G16785 31.250 224 102 8 202 408 389 577 3.72e-18 90.1

Find 157 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAAATCACCTGGGAAATT+TGG 0.100944 3.4:+93242909 None:intergenic
TTAATGCAATTCAAACTTTC+TGG 0.122895 3.4:+93241437 None:intergenic
TCCCTTACCTATCATCATTT+TGG 0.178826 3.4:+93241894 None:intergenic
TTGTATTTGAACATGGATTT+TGG 0.185371 3.4:+93243652 None:intergenic
GCTTGAACTGAAGCACTTTC+AGG 0.203277 3.4:+93242144 None:intergenic
GAAAGGTTTCATTCCATTTC+GGG 0.221154 3.4:+93243852 None:intergenic
CCCATTGGAGCGACTCTAAT+TGG 0.224022 3.4:-93243773 MS.gene67061:CDS
AGCAGTTATGGTTCCATTAT+TGG 0.224317 3.4:+93241310 None:intergenic
AATCCATATATTTGTCCTTT+TGG 0.234668 3.4:+93241521 None:intergenic
ATCGATGCTGGTGCTGCTTC+TGG 0.242139 3.4:-93242471 MS.gene67061:CDS
GTCTATTACTGGTGGCTATA+TGG 0.261291 3.4:+93241546 None:intergenic
CATCTTGGTAAAGAGTAATT+TGG 0.273836 3.4:+93243531 None:intergenic
AAAACATTTCACAGATTATT+GGG 0.279095 3.4:-93243940 MS.gene67061:intron
TGAAAGGTTTCATTCCATTT+CGG 0.287963 3.4:+93243851 None:intergenic
TTAATGTTCTTATGCTTGTT+TGG 0.298166 3.4:-93243277 MS.gene67061:CDS
CCAACAGAAGCCGCTGAAAA+AGG 0.298342 3.4:-93242435 MS.gene67061:CDS
CCATTATTGGTTACTTGTAT+TGG 0.306443 3.4:+93241323 None:intergenic
CCAATACAAGTAACCAATAA+TGG 0.313741 3.4:-93241323 MS.gene67061:CDS
GATACTAAGGCTAAGATTCT+AGG 0.315033 3.4:-93241263 MS.gene67061:CDS
TGTCAACAATTATAGTCTTC+TGG 0.324805 3.4:+93243078 None:intergenic
AAGAACATTAACACCTTCAT+TGG 0.328996 3.4:+93243289 None:intergenic
ACATTCTTTAAACAAAATAA+TGG 0.329312 3.4:-93243557 MS.gene67061:CDS
GTTGTTCTTGTTGACTTGTT+TGG 0.332002 3.4:+93243344 None:intergenic
TGGAGGAAGGTACTCAGATT+TGG 0.345102 3.4:+93241238 None:intergenic
GGAACCATAACTGCTCTTCC+AGG 0.349450 3.4:-93241302 MS.gene67061:CDS
CCACCAAAAGGACAAATATA+TGG 0.350161 3.4:-93241524 MS.gene67061:CDS
CCCTTTATGACTTGTTCAAC+TGG 0.351702 3.4:+93243737 None:intergenic
GTTGGAAGAACTAGAATGAT+AGG 0.353330 3.4:-93243878 MS.gene67061:CDS
TAATGTTCTTATGCTTGTTT+GGG 0.358547 3.4:-93243276 MS.gene67061:CDS
ACTCCATCCAATGGAATATA+CGG 0.365105 3.4:+93243485 None:intergenic
GATATTAAAGTTGAGGATAT+TGG 0.365230 3.4:-93242276 MS.gene67061:CDS
TCCAGTTGAACAAGTCATAA+AGG 0.366172 3.4:-93243738 MS.gene67061:CDS
ATATAATCACTGTCAGGTTC+TGG 0.366661 3.4:+93241958 None:intergenic
CTTTAAGAAAGATGGCTTGA+TGG 0.371228 3.4:-93243231 MS.gene67061:CDS
CAGTTCAAGCAATATTAGAT+TGG 0.371630 3.4:-93242131 MS.gene67061:CDS
TTTAGTCCTTGTGACCAGTT+TGG 0.378654 3.4:+93243608 None:intergenic
GTTCCTGACTTTAAGAAAGA+TGG 0.382115 3.4:-93243239 MS.gene67061:CDS
CATGGCTAGGTGGTGAGAAT+TGG 0.390572 3.4:+93241218 None:intergenic
TAAAATGACAAGTAATCTCT+TGG 0.395875 3.4:+93242036 None:intergenic
TTACTGGTGGCTATATGGTT+TGG 0.403321 3.4:+93241551 None:intergenic
CAAGATGCACATGTTCTAGA+TGG 0.408428 3.4:-93243515 MS.gene67061:CDS
GATGATGAATACATAATCAT+TGG 0.412861 3.4:-93241644 MS.gene67061:CDS
TATGAGCACCTTGGAGATAT+TGG 0.417376 3.4:-93241482 MS.gene67061:CDS
GTTCATGCCAAAATGATGAT+AGG 0.420607 3.4:-93241901 MS.gene67061:intron
AGAATCTTAGCCTTAGTATC+AGG 0.421693 3.4:+93241266 None:intergenic
CAAGAACAACCATCACTCTT+GGG 0.423882 3.4:-93243331 MS.gene67061:CDS
CGGCTTCTGTTGGATCTTGA+GGG 0.427130 3.4:+93242445 None:intergenic
AAATCCTGGAAGAGCAGTTA+TGG 0.432056 3.4:+93241298 None:intergenic
GCACTTTCAGGTATACCTTC+TGG 0.435666 3.4:+93242156 None:intergenic
ATCTTCAGTGACAACTCCTT+TGG 0.436891 3.4:+93242237 None:intergenic
GCGGCTTCTGTTGGATCTTG+AGG 0.438003 3.4:+93242444 None:intergenic
AAGCCATCTTTCTTAAAGTC+AGG 0.443766 3.4:+93243236 None:intergenic
AGATTGGCAAAGAAGGACTA+TGG 0.445851 3.4:-93242115 MS.gene67061:CDS
CAATATTAGATTGGCAAAGA+AGG 0.446472 3.4:-93242122 MS.gene67061:CDS
GAATGATAGGTAGCCCGAAA+TGG 0.447072 3.4:-93243865 MS.gene67061:CDS
CCAATTAGAGTCGCTCCAAT+GGG 0.447711 3.4:+93243773 None:intergenic
GATATTCATTGTAAACTAGA+AGG 0.448111 3.4:-93242666 MS.gene67061:CDS
GTTCCGTATATTCCATTGGA+TGG 0.448817 3.4:-93243488 MS.gene67061:CDS
TTCTAGGTAGTTCATATGGT+TGG 0.454363 3.4:-93242308 MS.gene67061:CDS
CTTGTTTGGATCTCTAATCA+AGG 0.457534 3.4:+93243358 None:intergenic
GTGACAACTCCTTTGGTATG+AGG 0.458272 3.4:+93242244 None:intergenic
CTTTGAGTATATGTCCCAAT+TGG 0.459345 3.4:+93241391 None:intergenic
ACAAGAACAACCATCACTCT+TGG 0.459719 3.4:-93243332 MS.gene67061:CDS
CCAGTTGAACAAGTCATAAA+GGG 0.460625 3.4:-93243737 MS.gene67061:CDS
CACAACACATCCCATGCAAC+AGG 0.462297 3.4:+93242642 None:intergenic
CGAAACATGCTTGAAGGTAG+TGG 0.463688 3.4:+93242573 None:intergenic
AGAGACAGTGAGATTGCAAT+AGG 0.465168 3.4:-93241584 MS.gene67061:CDS
TGAGGAACTCCTTGAAATCC+TGG 0.466088 3.4:+93243581 None:intergenic
ATATCATGCCATGGCTCTCT+AGG 0.466709 3.4:+93242684 None:intergenic
TTCTGTTCCGTATATTCCAT+TGG 0.467036 3.4:-93243492 MS.gene67061:CDS
ATTGTTAGCAAGATTGAAGC+TGG 0.474341 3.4:-93242216 MS.gene67061:CDS
CTAAAGAGTCCAGGATTTCA+AGG 0.476603 3.4:-93243590 MS.gene67061:CDS
CATTGATCTTTGATTTATGT+TGG 0.476676 3.4:+93241616 None:intergenic
TCAGGAAAACATTCAAATCC+TGG 0.477356 3.4:+93241284 None:intergenic
GTTGAAGCCCTTCAAAGAAA+AGG 0.478206 3.4:-93242072 MS.gene67061:CDS
TCAGGTTCTGGTGCCTCTGT+AGG 0.480853 3.4:+93241970 None:intergenic
AACTGGTTGGTCTGTTTACA+CGG 0.480935 3.4:-93243387 MS.gene67061:CDS
CATCTAGAACATGTGCATCT+TGG 0.481308 3.4:+93243516 None:intergenic
ATGGATTTAGACGTGCACTA+TGG 0.481715 3.4:-93241505 MS.gene67061:CDS
CATTTCACAGATTATTGGGA+TGG 0.486910 3.4:-93243936 MS.gene67061:intron
TCCAATTAGAGTCGCTCCAA+TGG 0.488605 3.4:+93243772 None:intergenic
GATTTAGACAAAGCAAGAGT+TGG 0.492961 3.4:-93243896 MS.gene67061:CDS
GGCTAGGTGGTGAGAATTGG+AGG 0.496635 3.4:+93241221 None:intergenic
AAAATGACAAGTAATCTCTT+GGG 0.497438 3.4:+93242037 None:intergenic
TATTCACGAAACATGCTTGA+AGG 0.498456 3.4:+93242567 None:intergenic
GTATGTGCCGGGAAAATGTT+GGG 0.500103 3.4:-93243456 MS.gene67061:CDS
TTGTTTAGATCGATCGATGC+TGG 0.502376 3.4:-93242483 MS.gene67061:CDS
GATGGAAGAAGTATAGTTCA+AGG 0.503461 3.4:-93243131 MS.gene67061:CDS
GTGGGATTGATCTTTGTGAT+GGG 0.506802 3.4:-93243001 MS.gene67061:CDS
AGGGCAACATAGTGAATACA+TGG 0.511698 3.4:-93243718 MS.gene67061:CDS
GCTCTAATATAATCACTGTC+AGG 0.514466 3.4:+93241952 None:intergenic
TGGAGTAGAACGGTATGTGC+CGG 0.519752 3.4:-93243468 MS.gene67061:CDS
CAACATAAATCAAAGATCAA+TGG 0.522850 3.4:-93241615 MS.gene67061:CDS
AACTAGAAGGACCTGTTGCA+TGG 0.522952 3.4:-93242653 MS.gene67061:CDS
GGAGTAGAACGGTATGTGCC+GGG 0.525843 3.4:-93243467 MS.gene67061:CDS
TTTGACAGTGAATATAATGC+TGG 0.527258 3.4:+93243805 None:intergenic
GGTGGGATTGATCTTTGTGA+TGG 0.527896 3.4:-93243002 MS.gene67061:CDS
TTTCATCAACCAAATTTCCC+AGG 0.530381 3.4:-93242918 MS.gene67061:intron
GGTATACCTTCTGGCCACAT+TGG 0.533593 3.4:+93242165 None:intergenic
CGGCAAATCAAAACAACACA+TGG 0.534970 3.4:-93242515 MS.gene67061:CDS
CTTAAGAAGAAAGCCAATGA+AGG 0.539673 3.4:-93243302 MS.gene67061:CDS
TCTTACCCTCTCGGTTTCCA+AGG 0.540213 3.4:+93242010 None:intergenic
CAAAGATGGGAAAAGCAAGT+TGG 0.540379 3.4:-93242609 MS.gene67061:CDS
GATATACCTCTGGCTTGCAT+TGG 0.543798 3.4:+93244085 None:intergenic
ACTATACTTCTTCCATCACC+AGG 0.545798 3.4:+93243137 None:intergenic
CTTCCATCACCAGGGTTACG+TGG 0.548889 3.4:+93243146 None:intergenic
ATTTCACAGATTATTGGGAT+GGG 0.555183 3.4:-93243935 MS.gene67061:intron
ACTAGAAGGACCTGTTGCAT+GGG 0.560087 3.4:-93242652 MS.gene67061:CDS
GTGGATCATCGTCCAATACA+AGG 0.562412 3.4:-93243680 MS.gene67061:CDS
AAGGGAACATGCACAAGCGT+GGG 0.570770 3.4:-93244153 MS.gene67061:CDS
TTCATATGGTTGGAAATCAT+CGG 0.572489 3.4:-93242298 MS.gene67061:CDS
ACCAGTAATAGACCACCAAA+AGG 0.573701 3.4:-93241536 MS.gene67061:CDS
ATGGGTTAATATATTAGATG+TGG 0.574499 3.4:-93243699 MS.gene67061:CDS
GTCATTCCAATGTGGCCAGA+AGG 0.574690 3.4:-93242171 MS.gene67061:CDS
TACCGTTCTACTCCATCCAA+TGG 0.576822 3.4:+93243476 None:intergenic
TGCTTTGCACCTCATACCAA+AGG 0.582854 3.4:-93242253 MS.gene67061:CDS
TGACAAGTAATCTCTTGGGT+TGG 0.586202 3.4:+93242041 None:intergenic
GTCAAACAAGATAACCCCAT+TGG 0.587028 3.4:-93243788 MS.gene67061:CDS
ATCATCGGATATTAAAGTTG+AGG 0.587336 3.4:-93242283 MS.gene67061:CDS
AAGAAGCTCCCCAAGAGTGA+TGG 0.594868 3.4:+93243322 None:intergenic
TCACAAGGACTAAAGAGTCC+AGG 0.595640 3.4:-93243599 MS.gene67061:CDS
TCGTCGAATAGCGTTTATGT+AGG 0.595975 3.4:+93242365 None:intergenic
CAAGGGAACATGCACAAGCG+TGG 0.596680 3.4:-93244154 MS.gene67061:intron
TGAAAACAAAGGATGTTCCA+TGG 0.602384 3.4:+93242968 None:intergenic
TATTGCCTTGGAAACCGAGA+GGG 0.604275 3.4:-93242015 MS.gene67061:CDS
TGCCCACGTAACCCTGGTGA+TGG 0.604924 3.4:-93243149 MS.gene67061:CDS
GGTATGTGCCGGGAAAATGT+TGG 0.606197 3.4:-93243457 MS.gene67061:CDS
TTTCTCTCCACATGGCTAGG+TGG 0.613613 3.4:+93241208 None:intergenic
GTGAGAATTGTATTTGAACA+TGG 0.616949 3.4:+93243645 None:intergenic
TTACAATGAATATCATGCCA+TGG 0.618761 3.4:+93242675 None:intergenic
ATGTGCAGAGTAAATGTGAA+AGG 0.624116 3.4:+93243835 None:intergenic
ATAAATCAAAGATCAATGGA+TGG 0.626562 3.4:-93241611 MS.gene67061:CDS
TTCCATCACCAGGGTTACGT+GGG 0.629779 3.4:+93243147 None:intergenic
AAGAACAACCATCACTCTTG+GGG 0.634263 3.4:-93243330 MS.gene67061:CDS
GTATTCAAAGTTGAAAACAA+AGG 0.635550 3.4:+93242957 None:intergenic
GCACTATGGTATGAGCACCT+TGG 0.638088 3.4:-93241491 MS.gene67061:CDS
AATGATCCAAACTGGTCACA+AGG 0.638447 3.4:-93243614 MS.gene67061:CDS
CAATTGGGACATATACTCAA+AGG 0.640794 3.4:-93241390 MS.gene67061:CDS
AGGTGGTGAGAATTGGAGGA+AGG 0.643329 3.4:+93241225 None:intergenic
GAATGAATATACTCCTACAG+AGG 0.643986 3.4:-93241983 MS.gene67061:CDS
TTGTATCACCAATATCTCCA+AGG 0.650254 3.4:+93241474 None:intergenic
CTTGTATTGGATAATGCATG+AGG 0.661800 3.4:+93241336 None:intergenic
TCGTGTATCGAATGTTGCCA+CGG 0.661868 3.4:-93242535 MS.gene67061:CDS
TTCCATTGGATGGAGTAGAA+CGG 0.671871 3.4:-93243478 MS.gene67061:CDS
GGTGCTTCTATTAACAAAGG+TGG 0.672280 3.4:-93242708 MS.gene67061:CDS
ACAGGTGCTTCTATTAACAA+AGG 0.672622 3.4:-93242711 MS.gene67061:intron
AAGTTGCTAGTTCTGCACAA+TGG 0.673752 3.4:-93243052 MS.gene67061:CDS
AGGGAACATGCACAAGCGTG+GGG 0.679420 3.4:-93244152 MS.gene67061:CDS
TGATGGGAGATATGATACCA+TGG 0.695563 3.4:-93242985 MS.gene67061:CDS
CTATACTTCTTCCATCACCA+GGG 0.698859 3.4:+93243138 None:intergenic
AAGGTGGTCCTAGAGAGCCA+TGG 0.705923 3.4:-93242692 MS.gene67061:CDS
GGGCAACATAGTGAATACAT+GGG 0.707757 3.4:-93243717 MS.gene67061:CDS
TCAATGCCAATGCAAGCCAG+AGG 0.708442 3.4:-93244091 MS.gene67061:intron
CAATTAGAGTCGCTCCAATG+GGG 0.713373 3.4:+93243774 None:intergenic
TTATTGCCTTGGAAACCGAG+AGG 0.718876 3.4:-93242016 MS.gene67061:CDS
TGTACATTGTCATTCCAATG+TGG 0.747438 3.4:-93242179 MS.gene67061:CDS
GATCATCGTCCAATACAAGG+CGG 0.779275 3.4:-93243677 MS.gene67061:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTGAAATATTAGTTAAA+CGG - chr3.4:93241789-93241808 MS.gene67061:intron 10.0%
!!! AATAAATAAGAGTATATTAA+TGG + chr3.4:93241438-93241457 None:intergenic 10.0%
!! AAAATATAAAATATTCCAAC+AGG - chr3.4:93243966-93243985 MS.gene67061:intron 15.0%
!! AATAAATGTAAAATAGAAAC+AGG + chr3.4:93244843-93244862 None:intergenic 15.0%
!! ACATTCTTTAAACAAAATAA+TGG - chr3.4:93243138-93243157 MS.gene67061:CDS 15.0%
!! CAATATGTTTATATCAAATT+TGG - chr3.4:93241649-93241668 MS.gene67061:CDS 15.0%
!! CTTGAGAAAATATAAATTAA+AGG - chr3.4:93241878-93241897 MS.gene67061:intron 15.0%
!! TTATTAATGAAATGATTAGT+TGG + chr3.4:93241547-93241566 None:intergenic 15.0%
!! TTTGAGAAAAAGAAAAAAAA+TGG + chr3.4:93241370-93241389 None:intergenic 15.0%
!!! TAATAAATTTTCTTTTGCAA+AGG + chr3.4:93244984-93245003 None:intergenic 15.0%
!!! TATTAATGAAATGATTAGTT+GGG + chr3.4:93241546-93241565 None:intergenic 15.0%
!! AAAAACATTTCACAGATTAT+TGG - chr3.4:93242754-93242773 MS.gene67061:intron 20.0%
!! AAAAATAATAAATGCTGCAT+TGG + chr3.4:93241413-93241432 None:intergenic 20.0%
!! AAAACATTTCACAGATTATT+GGG - chr3.4:93242755-93242774 MS.gene67061:intron 20.0%
!! AAACAACTATAATTTAGAGA+CGG - chr3.4:93241582-93241601 MS.gene67061:CDS 20.0%
!! ATCAAATTTGGTATGATTAT+TGG - chr3.4:93241661-93241680 MS.gene67061:intron 20.0%
!! CAATCTACTTAAAATGAAAT+TGG + chr3.4:93242354-93242373 None:intergenic 20.0%
!! CTCTAAATTATAGTTGTTTA+AGG + chr3.4:93241581-93241600 None:intergenic 20.0%
!! TCTACTAAGTACAATTAATA+AGG - chr3.4:93241480-93241499 MS.gene67061:CDS 20.0%
!! TGACAAATTCATTAGAAAAA+AGG + chr3.4:93242421-93242440 None:intergenic 20.0%
!!! ATTATTGGTTATTTTACCAA+AGG - chr3.4:93241676-93241695 MS.gene67061:intron 20.0%
!!! ATTGAAAATCAGTATTTTCT+AGG - chr3.4:93244371-93244390 MS.gene67061:intron 20.0%
!!! TTAAAGTTTAAGACAATAGA+TGG - chr3.4:93241931-93241950 MS.gene67061:CDS 20.0%
!!! TTATATTTTCTCAAGTATGT+TGG + chr3.4:93241873-93241892 None:intergenic 20.0%
! AAAATGACAAGTAATCTCTT+GGG + chr3.4:93244661-93244680 None:intergenic 25.0%
! AGGACTTAATTATGAAATGT+TGG - chr3.4:93243923-93243942 MS.gene67061:CDS 25.0%
! ATAAATCAAAGATCAATGGA+TGG - chr3.4:93245084-93245103 MS.gene67061:intron 25.0%
! ATAATTACTATCTTGACTGA+GGG + chr3.4:93241299-93241318 None:intergenic 25.0%
! ATATTAGTTAAACGGTAATC+TGG - chr3.4:93241797-93241816 MS.gene67061:intron 25.0%
! ATGTTAAAAATGATCCAAAC+TGG - chr3.4:93243073-93243092 MS.gene67061:CDS 25.0%
! CAACATAAATCAAAGATCAA+TGG - chr3.4:93245080-93245099 MS.gene67061:intron 25.0%
! CTTTCAAATTTCGTAAACAA+GGG - chr3.4:93242524-93242543 MS.gene67061:CDS 25.0%
! GAAACAGGTAATATATATGT+TGG + chr3.4:93244828-93244847 None:intergenic 25.0%
! GATATTAAAGTTGAGGATAT+TGG - chr3.4:93244419-93244438 MS.gene67061:intron 25.0%
! GATATTCATTGTAAACTAGA+AGG - chr3.4:93244029-93244048 MS.gene67061:intron 25.0%
! GATGATGAATACATAATCAT+TGG - chr3.4:93245051-93245070 MS.gene67061:intron 25.0%
! GGAGTCAAAAACAATAAAAT+TGG + chr3.4:93241268-93241287 None:intergenic 25.0%
! GTATTCAAAGTTGAAAACAA+AGG + chr3.4:93243741-93243760 None:intergenic 25.0%
! GTTTGAATTGGTAGATTTAT+AGG + chr3.4:93241997-93242016 None:intergenic 25.0%
! TAAAATGACAAGTAATCTCT+TGG + chr3.4:93244662-93244681 None:intergenic 25.0%
! TAATGTTCTTATGCTTGTTT+GGG - chr3.4:93243419-93243438 MS.gene67061:CDS 25.0%
! TACAGATTATATAGTCAACA+AGG + chr3.4:93242655-93242674 None:intergenic 25.0%
! TAGGTGTTAGAATGTATAAA+GGG + chr3.4:93242725-93242744 None:intergenic 25.0%
! TTAATGCAATTCAAACTTTC+TGG + chr3.4:93245261-93245280 None:intergenic 25.0%
! TTAATGTTCTTATGCTTGTT+TGG - chr3.4:93243418-93243437 MS.gene67061:CDS 25.0%
! TTAGGTGTTAGAATGTATAA+AGG + chr3.4:93242726-93242745 None:intergenic 25.0%
!! AATCCATATATTTGTCCTTT+TGG + chr3.4:93245177-93245196 None:intergenic 25.0%
!! ATGGGTTAATATATTAGATG+TGG - chr3.4:93242996-93243015 MS.gene67061:CDS 25.0%
!! CATTGATCTTTGATTTATGT+TGG + chr3.4:93245082-93245101 None:intergenic 25.0%
!! TAAGTAAGAGTACAATTACA+TGG + chr3.4:93242091-93242110 None:intergenic 25.0%
!! TATTTTCTAGGTAGTTCATA+TGG - chr3.4:93244383-93244402 MS.gene67061:intron 25.0%
!! TTGTATTTGAACATGGATTT+TGG + chr3.4:93243046-93243065 None:intergenic 25.0%
!!! AAATGTTTTTACATGTCGTT+AGG + chr3.4:93242744-93242763 None:intergenic 25.0%
!!! AAGCATTTTATTTGCATAAC+TGG - chr3.4:93243291-93243310 MS.gene67061:CDS 25.0%
!!! ATTGGAAAGTGTCAATTTAA+TGG + chr3.4:93244946-93244965 None:intergenic 25.0%
!!! ATTTTATTTGCATAACTGGT+TGG - chr3.4:93243295-93243314 MS.gene67061:CDS 25.0%
!!! TGTCTTAAACTTTAAAGTCA+AGG + chr3.4:93241926-93241945 None:intergenic 25.0%
!!! TTTTGTTTAAAGAATGTGTG+AGG + chr3.4:93243135-93243154 None:intergenic 25.0%
AACTATAATTTAGAGACGGA+GGG - chr3.4:93241586-93241605 MS.gene67061:CDS 30.0%
AAGAACATTAACACCTTCAT+TGG + chr3.4:93243409-93243428 None:intergenic 30.0%
AAGTGACAATTATTGTGAGA+CGG + chr3.4:93241345-93241364 None:intergenic 30.0%
AATATGTGAAGATATACCTC+TGG + chr3.4:93242623-93242642 None:intergenic 30.0%
ACTTAGTAGAGTAGTTAAGT+TGG + chr3.4:93241470-93241489 None:intergenic 30.0%
AGAGTACAATTACATGGAAA+TGG + chr3.4:93242085-93242104 None:intergenic 30.0%
AGGTGTATGTGCTAATTAAT+TGG + chr3.4:93244964-93244983 None:intergenic 30.0%
ATAAATCAGCAAATACACAG+AGG + chr3.4:93242503-93242522 None:intergenic 30.0%
ATCATCGGATATTAAAGTTG+AGG - chr3.4:93244412-93244431 MS.gene67061:intron 30.0%
ATTTCACAGATTATTGGGAT+GGG - chr3.4:93242760-93242779 MS.gene67061:intron 30.0%
CAATATTAGATTGGCAAAGA+AGG - chr3.4:93244573-93244592 MS.gene67061:intron 30.0%
CAGTTCAAGCAATATTAGAT+TGG - chr3.4:93244564-93244583 MS.gene67061:intron 30.0%
CATAATTACTATCTTGACTG+AGG + chr3.4:93241300-93241319 None:intergenic 30.0%
CATCTTGGTAAAGAGTAATT+TGG + chr3.4:93243167-93243186 None:intergenic 30.0%
CCAATACAAGTAACCAATAA+TGG - chr3.4:93245372-93245391 MS.gene67061:intron 30.0%
GCATGCATATTTACAATCTT+AGG - chr3.4:93243903-93243922 MS.gene67061:CDS 30.0%
GCTTTCAAATTTCGTAAACA+AGG - chr3.4:93242523-93242542 MS.gene67061:CDS 30.0%
GTGAGAATTGTATTTGAACA+TGG + chr3.4:93243053-93243072 None:intergenic 30.0%
TGAAAGGTTTCATTCCATTT+CGG + chr3.4:93242847-93242866 None:intergenic 30.0%
TGTCAACAATTATAGTCTTC+TGG + chr3.4:93243620-93243639 None:intergenic 30.0%
TTACAATGAATATCATGCCA+TGG + chr3.4:93244023-93244042 None:intergenic 30.0%
TTCATATGGTTGGAAATCAT+CGG - chr3.4:93244397-93244416 MS.gene67061:intron 30.0%
TTTGACAGTGAATATAATGC+TGG + chr3.4:93242893-93242912 None:intergenic 30.0%
! CCATTATTGGTTACTTGTAT+TGG + chr3.4:93245375-93245394 None:intergenic 30.0%
! TCTGATTCCTTTTCTTTGAA+GGG + chr3.4:93244633-93244652 None:intergenic 30.0%
! TGAATGTTTTCCTGATACTA+AGG - chr3.4:93245419-93245438 MS.gene67061:intron 30.0%
!! AGAACAATCACAAGTTTTGT+TGG - chr3.4:93243672-93243691 MS.gene67061:CDS 30.0%
!!! TACTTGTCATTTTATTGCCT+TGG - chr3.4:93244668-93244687 MS.gene67061:intron 30.0%
AAACTAGTTCCAAAATCACC+TGG + chr3.4:93243798-93243817 None:intergenic 35.0%
AACGCAGTTCAAATATCTTC+GGG + chr3.4:93244896-93244915 None:intergenic 35.0%
AACTAGTTCCAAAATCACCT+GGG + chr3.4:93243797-93243816 None:intergenic 35.0%
AAGCCATCTTTCTTAAAGTC+AGG + chr3.4:93243462-93243481 None:intergenic 35.0%
ACAGGTGCTTCTATTAACAA+AGG - chr3.4:93243984-93244003 MS.gene67061:intron 35.0%
ACTCCATCCAATGGAATATA+CGG + chr3.4:93243213-93243232 None:intergenic 35.0%
AGCAGTTATGGTTCCATTAT+TGG + chr3.4:93245388-93245407 None:intergenic 35.0%
ATAGGCAGAGACTTAAAGAT+GGG + chr3.4:93241979-93241998 None:intergenic 35.0%
ATATAATCACTGTCAGGTTC+TGG + chr3.4:93244740-93244759 None:intergenic 35.0%
ATGTGCAGAGTAAATGTGAA+AGG + chr3.4:93242863-93242882 None:intergenic 35.0%
ATTGTTAGCAAGATTGAAGC+TGG - chr3.4:93244479-93244498 MS.gene67061:intron 35.0%
CAACTATAATTTAGAGACGG+AGG - chr3.4:93241585-93241604 MS.gene67061:CDS 35.0%
CAATTGGGACATATACTCAA+AGG - chr3.4:93245305-93245324 MS.gene67061:intron 35.0%
CATTTCACAGATTATTGGGA+TGG - chr3.4:93242759-93242778 MS.gene67061:intron 35.0%
CCACCAAAAGGACAAATATA+TGG - chr3.4:93245171-93245190 MS.gene67061:intron 35.0%
CCAGTTGAACAAGTCATAAA+GGG - chr3.4:93242958-93242977 MS.gene67061:CDS 35.0%
CTTAAGAAGAAAGCCAATGA+AGG - chr3.4:93243393-93243412 MS.gene67061:CDS 35.0%
CTTGTATTGGATAATGCATG+AGG + chr3.4:93245362-93245381 None:intergenic 35.0%
CTTGTTTGGATCTCTAATCA+AGG + chr3.4:93243340-93243359 None:intergenic 35.0%
CTTTGAGTATATGTCCCAAT+TGG + chr3.4:93245307-93245326 None:intergenic 35.0%
GAAAGGTTTCATTCCATTTC+GGG + chr3.4:93242846-93242865 None:intergenic 35.0%
GAACGCAGTTCAAATATCTT+CGG + chr3.4:93244897-93244916 None:intergenic 35.0%
GAATGAATATACTCCTACAG+AGG - chr3.4:93244712-93244731 MS.gene67061:intron 35.0%
GATACTAAGGCTAAGATTCT+AGG - chr3.4:93245432-93245451 MS.gene67061:intron 35.0%
GATTTAGACAAAGCAAGAGT+TGG - chr3.4:93242799-93242818 MS.gene67061:intron 35.0%
GCCAAAATGATGATAGGTAA+GGG - chr3.4:93244800-93244819 MS.gene67061:intron 35.0%
GCTCTAATATAATCACTGTC+AGG + chr3.4:93244746-93244765 None:intergenic 35.0%
GCTTGATGTGACTATATATG+AGG - chr3.4:93242240-93242259 MS.gene67061:CDS 35.0%
GTACAATTACATGGAAATGG+AGG + chr3.4:93242082-93242101 None:intergenic 35.0%
GTTCATGCCAAAATGATGAT+AGG - chr3.4:93244794-93244813 MS.gene67061:intron 35.0%
GTTGGAAGAACTAGAATGAT+AGG - chr3.4:93242817-93242836 MS.gene67061:intron 35.0%
TACCAATTCAAACCAAACCA+AGG - chr3.4:93242004-93242023 MS.gene67061:CDS 35.0%
TACCTCTTCCTTGAAAGTTA+AGG - chr3.4:93241835-93241854 MS.gene67061:intron 35.0%
TATAGGCAGAGACTTAAAGA+TGG + chr3.4:93241980-93241999 None:intergenic 35.0%
TATCCTTATGATGAATGCCT+TGG + chr3.4:93242024-93242043 None:intergenic 35.0%
TATTCACGAAACATGCTTGA+AGG + chr3.4:93244131-93244150 None:intergenic 35.0%
TATTTGAACTGCGTTCTTTG+AGG - chr3.4:93244901-93244920 MS.gene67061:intron 35.0%
TCAGGAAAACATTCAAATCC+TGG + chr3.4:93245414-93245433 None:intergenic 35.0%
TCCAGTTGAACAAGTCATAA+AGG - chr3.4:93242957-93242976 MS.gene67061:CDS 35.0%
TCTTCCTTGAAAGTTAAGGT+GGG - chr3.4:93241839-93241858 MS.gene67061:intron 35.0%
TGAAAACAAAGGATGTTCCA+TGG + chr3.4:93243730-93243749 None:intergenic 35.0%
TGCCAAAATGATGATAGGTA+AGG - chr3.4:93244799-93244818 MS.gene67061:intron 35.0%
TGTACATTGTCATTCCAATG+TGG - chr3.4:93244516-93244535 MS.gene67061:intron 35.0%
TTACATGGAAATGGAGGTTA+AGG + chr3.4:93242076-93242095 None:intergenic 35.0%
TTATGATGAATGCCTTGGTT+TGG + chr3.4:93242019-93242038 None:intergenic 35.0%
TTCTAGGTAGTTCATATGGT+TGG - chr3.4:93244387-93244406 MS.gene67061:intron 35.0%
TTCTGTTCCGTATATTCCAT+TGG - chr3.4:93243203-93243222 MS.gene67061:CDS 35.0%
TTTCATCAACCAAATTTCCC+AGG - chr3.4:93243777-93243796 MS.gene67061:CDS 35.0%
! AAACCAAGGCATTCATCATA+AGG - chr3.4:93242018-93242037 MS.gene67061:CDS 35.0%
! AGTTGTTTAAGGTTTGTGCA+CGG + chr3.4:93241570-93241589 None:intergenic 35.0%
! CATTCATTTTCTTACCCTCT+CGG + chr3.4:93244697-93244716 None:intergenic 35.0%
! CCATATATTTGTCCTTTTGG+TGG + chr3.4:93245174-93245193 None:intergenic 35.0%
! CTCTGATTCCTTTTCTTTGA+AGG + chr3.4:93244634-93244653 None:intergenic 35.0%
! CTTTAAGAAAGATGGCTTGA+TGG - chr3.4:93243464-93243483 MS.gene67061:CDS 35.0%
! GATGGAAGAAGTATAGTTCA+AGG - chr3.4:93243564-93243583 MS.gene67061:CDS 35.0%
! GTGCAATTTTGAGCAAAGAT+GGG - chr3.4:93244073-93244092 MS.gene67061:intron 35.0%
! GTTCCTGACTTTAAGAAAGA+TGG - chr3.4:93243456-93243475 MS.gene67061:CDS 35.0%
! GTTTTTATTGCACACAGCAA+GGG - chr3.4:93242165-93242184 MS.gene67061:CDS 35.0%
! TCCCTTACCTATCATCATTT+TGG + chr3.4:93244804-93244823 None:intergenic 35.0%
! TGTGCAATTTTGAGCAAAGA+TGG - chr3.4:93244072-93244091 MS.gene67061:intron 35.0%
!! AGAATCTTAGCCTTAGTATC+AGG + chr3.4:93245432-93245451 None:intergenic 35.0%
!! GTTGTTCTTGTTGACTTGTT+TGG + chr3.4:93243354-93243373 None:intergenic 35.0%
!! TGTTTTTATTGCACACAGCA+AGG - chr3.4:93242164-93242183 MS.gene67061:CDS 35.0%
!! TTGTTAATAGAAGCACCTGT+TGG + chr3.4:93243984-93244003 None:intergenic 35.0%
!!! ACAATCACAAGTTTTGTTGG+TGG - chr3.4:93243675-93243694 MS.gene67061:CDS 35.0%
!!! AGTAACAAGACCTTTTTCAG+CGG + chr3.4:93244273-93244292 None:intergenic 35.0%
!!! CAATCACAAGTTTTGTTGGT+GGG - chr3.4:93243676-93243695 MS.gene67061:CDS 35.0%
AAATCCTGGAAGAGCAGTTA+TGG + chr3.4:93245400-93245419 None:intergenic 40.0%
AAGAACAACCATCACTCTTG+GGG - chr3.4:93243365-93243384 MS.gene67061:CDS 40.0%
AATGATCCAAACTGGTCACA+AGG - chr3.4:93243081-93243100 MS.gene67061:CDS 40.0%
ACAAGAACAACCATCACTCT+TGG - chr3.4:93243363-93243382 MS.gene67061:CDS 40.0%
ACCAGTAATAGACCACCAAA+AGG - chr3.4:93245159-93245178 MS.gene67061:intron 40.0%
ACTATACTTCTTCCATCACC+AGG + chr3.4:93243561-93243580 None:intergenic 40.0%
ACTTAAAGATGGGCAAAGAG+AGG + chr3.4:93241969-93241988 None:intergenic 40.0%
ACTTTGTTCATGCCTTGTGT+GGG + chr3.4:93241768-93241787 None:intergenic 40.0%
AGAGACAGTGAGATTGCAAT+AGG - chr3.4:93245111-93245130 MS.gene67061:intron 40.0%
AGATTGGCAAAGAAGGACTA+TGG - chr3.4:93244580-93244599 MS.gene67061:intron 40.0%
AGGGCAACATAGTGAATACA+TGG - chr3.4:93242977-93242996 MS.gene67061:CDS 40.0%
AGTTCCCACCTTAACTTTCA+AGG + chr3.4:93241846-93241865 None:intergenic 40.0%
ATCTTCAGTGACAACTCCTT+TGG + chr3.4:93244461-93244480 None:intergenic 40.0%
ATGGAAATGGAGGTTAAGGA+GGG + chr3.4:93242072-93242091 None:intergenic 40.0%
ATGGATTTAGACGTGCACTA+TGG - chr3.4:93245190-93245209 MS.gene67061:intron 40.0%
CAAAGATGGGAAAAGCAAGT+TGG - chr3.4:93244086-93244105 MS.gene67061:intron 40.0%
CAAGAACAACCATCACTCTT+GGG - chr3.4:93243364-93243383 MS.gene67061:CDS 40.0%
CAATTTCGATCTCTGCAACA+AGG - chr3.4:93242291-93242310 MS.gene67061:CDS 40.0%
CACCTTAACTTTCAAGGAAG+AGG + chr3.4:93241840-93241859 None:intergenic 40.0%
CCAAAATCACCTGGGAAATT+TGG + chr3.4:93243789-93243808 None:intergenic 40.0%
CGGCAAATCAAAACAACACA+TGG - chr3.4:93244180-93244199 MS.gene67061:intron 40.0%
CTAAAGAGTCCAGGATTTCA+AGG - chr3.4:93243105-93243124 MS.gene67061:CDS 40.0%
CTATACTTCTTCCATCACCA+GGG + chr3.4:93243560-93243579 None:intergenic 40.0%
CTCTTCCTTGAAAGTTAAGG+TGG - chr3.4:93241838-93241857 MS.gene67061:intron 40.0%
CTTAAAGATGGGCAAAGAGA+GGG + chr3.4:93241968-93241987 None:intergenic 40.0%
GACAATTATTGTGAGACGGA+GGG + chr3.4:93241341-93241360 None:intergenic 40.0%
GATACACTACAAACTCTTGC+CGG - chr3.4:93242265-93242284 MS.gene67061:CDS 40.0%
GGGCAACATAGTGAATACAT+GGG - chr3.4:93242978-93242997 MS.gene67061:CDS 40.0%
GGTGCTTCTATTAACAAAGG+TGG - chr3.4:93243987-93244006 MS.gene67061:intron 40.0%
GTCAAACAAGATAACCCCAT+TGG - chr3.4:93242907-93242926 MS.gene67061:intron 40.0%
GTCATGTTGCACTTACTACA+CGG - chr3.4:93242214-93242233 MS.gene67061:CDS 40.0%
GTCTATTACTGGTGGCTATA+TGG + chr3.4:93245152-93245171 None:intergenic 40.0%
GTGGGATTGATCTTTGTGAT+GGG - chr3.4:93243694-93243713 MS.gene67061:CDS 40.0%
GTTCCGTATATTCCATTGGA+TGG - chr3.4:93243207-93243226 MS.gene67061:CDS 40.0%
GTTGAAGCCCTTCAAAGAAA+AGG - chr3.4:93244623-93244642 MS.gene67061:intron 40.0%
TCAGTACTCATAGCATGAGA+GGG - chr3.4:93241724-93241743 MS.gene67061:intron 40.0%
TCATGTTGCACTTACTACAC+GGG - chr3.4:93242215-93242234 MS.gene67061:CDS 40.0%
TCGTCGAATAGCGTTTATGT+AGG + chr3.4:93244333-93244352 None:intergenic 40.0%
TGACAAGTAATCTCTTGGGT+TGG + chr3.4:93244657-93244676 None:intergenic 40.0%
TGACAATTATTGTGAGACGG+AGG + chr3.4:93241342-93241361 None:intergenic 40.0%
TGATGGGAGATATGATACCA+TGG - chr3.4:93243710-93243729 MS.gene67061:CDS 40.0%
TTAAAGATGGGCAAAGAGAG+GGG + chr3.4:93241967-93241986 None:intergenic 40.0%
TTACTGGTGGCTATATGGTT+TGG + chr3.4:93245147-93245166 None:intergenic 40.0%
TTCCATTGGATGGAGTAGAA+CGG - chr3.4:93243217-93243236 MS.gene67061:CDS 40.0%
TTGTTTAGATCGATCGATGC+TGG - chr3.4:93244212-93244231 MS.gene67061:intron 40.0%
TTTAGTCCTTGTGACCAGTT+TGG + chr3.4:93243090-93243109 None:intergenic 40.0%
! ATCGTTTTGCTGAGACCAAT+TGG - chr3.4:93245289-93245308 MS.gene67061:intron 40.0%
! CAAGATGCACATGTTCTAGA+TGG - chr3.4:93243180-93243199 MS.gene67061:CDS 40.0%
! CATCTAGAACATGTGCATCT+TGG + chr3.4:93243182-93243201 None:intergenic 40.0%
! CCAAATTTCCCAGGTGATTT+TGG - chr3.4:93243786-93243805 MS.gene67061:CDS 40.0%
! GTATCTTCCCAACATTTTCC+CGG + chr3.4:93243249-93243268 None:intergenic 40.0%
! TCGTTTTGCTGAGACCAATT+GGG - chr3.4:93245290-93245309 MS.gene67061:intron 40.0%
! TCTTGACTGAGGGTGTAATT+AGG + chr3.4:93241289-93241308 None:intergenic 40.0%
!! AACTGGTTGGTCTGTTTACA+CGG - chr3.4:93243308-93243327 MS.gene67061:CDS 40.0%
!! AAGTTGCTAGTTCTGCACAA+TGG - chr3.4:93243643-93243662 MS.gene67061:CDS 40.0%
!! CCCTTTATGACTTGTTCAAC+TGG + chr3.4:93242961-93242980 None:intergenic 40.0%
!! GCTGAAAAAGGTCTTGTTAC+TGG - chr3.4:93244272-93244291 MS.gene67061:intron 40.0%
!! TCATGCTATGAGTACTGACT+GGG + chr3.4:93241722-93241741 None:intergenic 40.0%
!! TCCTTTTGGTGGTCTATTAC+TGG + chr3.4:93245163-93245182 None:intergenic 40.0%
!! TGCCTTGGTTTGGTTTGAAT+TGG + chr3.4:93242009-93242028 None:intergenic 40.0%
!! TTTTGGTGGTCTATTACTGG+TGG + chr3.4:93245160-93245179 None:intergenic 40.0%
!!! ATTTTGGAACCGCCTTGTAT+TGG + chr3.4:93243030-93243049 None:intergenic 40.0%
!!! TGTGTTGTTTTGATTTGCCG+TGG + chr3.4:93244180-93244199 None:intergenic 40.0%
AACTAGAAGGACCTGTTGCA+TGG - chr3.4:93244042-93244061 MS.gene67061:intron 45.0%
ACTAGAAGGACCTGTTGCAT+GGG - chr3.4:93244043-93244062 MS.gene67061:intron 45.0%
ACTCATGGGAATTGGTCCTT+TGG + chr3.4:93241695-93241714 None:intergenic 45.0%
ATATCATGCCATGGCTCTCT+AGG + chr3.4:93244014-93244033 None:intergenic 45.0%
CAATTAGAGTCGCTCCAATG+GGG + chr3.4:93242924-93242943 None:intergenic 45.0%
CACTTTGTTCATGCCTTGTG+TGG + chr3.4:93241769-93241788 None:intergenic 45.0%
CATGGAAATGGAGGTTAAGG+AGG + chr3.4:93242073-93242092 None:intergenic 45.0%
CCAATTAGAGTCGCTCCAAT+GGG + chr3.4:93242925-93242944 None:intergenic 45.0%
CGAAACATGCTTGAAGGTAG+TGG + chr3.4:93244125-93244144 None:intergenic 45.0%
CTGTTCCTAATTCCCACACA+AGG - chr3.4:93241753-93241772 MS.gene67061:intron 45.0%
GAATGATAGGTAGCCCGAAA+TGG - chr3.4:93242830-93242849 MS.gene67061:intron 45.0%
GATCATCGTCCAATACAAGG+CGG - chr3.4:93243018-93243037 MS.gene67061:CDS 45.0%
GCAGAGATCGAAATTGCATC+CGG + chr3.4:93242287-93242306 None:intergenic 45.0%
GGTGGGATTGATCTTTGTGA+TGG - chr3.4:93243693-93243712 MS.gene67061:CDS 45.0%
GTATGTGCCGGGAAAATGTT+GGG - chr3.4:93243239-93243258 MS.gene67061:CDS 45.0%
GTCAGTACTCATAGCATGAG+AGG - chr3.4:93241723-93241742 MS.gene67061:intron 45.0%
GTGACAACTCCTTTGGTATG+AGG + chr3.4:93244454-93244473 None:intergenic 45.0%
GTGGATCATCGTCCAATACA+AGG - chr3.4:93243015-93243034 MS.gene67061:CDS 45.0%
TACCGTTCTACTCCATCCAA+TGG + chr3.4:93243222-93243241 None:intergenic 45.0%
TATTGCCTTGGAAACCGAGA+GGG - chr3.4:93244680-93244699 MS.gene67061:intron 45.0%
TCACAAGGACTAAAGAGTCC+AGG - chr3.4:93243096-93243115 MS.gene67061:CDS 45.0%
TCATGCCTTGTGTGGGAATT+AGG + chr3.4:93241761-93241780 None:intergenic 45.0%
TCCAATTAGAGTCGCTCCAA+TGG + chr3.4:93242926-93242945 None:intergenic 45.0%
TCGTGTATCGAATGTTGCCA+CGG - chr3.4:93244160-93244179 MS.gene67061:intron 45.0%
TGAGGAACTCCTTGAAATCC+TGG + chr3.4:93243117-93243136 None:intergenic 45.0%
TGCTTTGCACCTCATACCAA+AGG - chr3.4:93244442-93244461 MS.gene67061:intron 45.0%
TTATTGCCTTGGAAACCGAG+AGG - chr3.4:93244679-93244698 MS.gene67061:intron 45.0%
! GATATACCTCTGGCTTGCAT+TGG + chr3.4:93242613-93242632 None:intergenic 45.0%
! GCACTTTCAGGTATACCTTC+TGG + chr3.4:93244542-93244561 None:intergenic 45.0%
! GCTTGAACTGAAGCACTTTC+AGG + chr3.4:93244554-93244573 None:intergenic 45.0%
!! CATGCTATGAGTACTGACTG+GGG + chr3.4:93241721-93241740 None:intergenic 45.0%
!! CTCATGCTATGAGTACTGAC+TGG + chr3.4:93241723-93241742 None:intergenic 45.0%
!! TGGAGGAAGGTACTCAGATT+TGG + chr3.4:93245460-93245479 None:intergenic 45.0%
AAGAAGCTCCCCAAGAGTGA+TGG + chr3.4:93243376-93243395 None:intergenic 50.0%
AAGGGAACATGCACAAGCGT+GGG - chr3.4:93242542-93242561 MS.gene67061:CDS 50.0%
AGGTGGTGAGAATTGGAGGA+AGG + chr3.4:93245473-93245492 None:intergenic 50.0%
CACAACACATCCCATGCAAC+AGG + chr3.4:93244056-93244075 None:intergenic 50.0%
CCAACAGAAGCCGCTGAAAA+AGG - chr3.4:93244260-93244279 MS.gene67061:intron 50.0%
CCCATTGGAGCGACTCTAAT+TGG - chr3.4:93242922-93242941 MS.gene67061:CDS 50.0%
CGGCTTCTGTTGGATCTTGA+GGG + chr3.4:93244253-93244272 None:intergenic 50.0%
GGAACCATAACTGCTCTTCC+AGG - chr3.4:93245393-93245412 MS.gene67061:intron 50.0%
GGTATACCTTCTGGCCACAT+TGG + chr3.4:93244533-93244552 None:intergenic 50.0%
GGTATGTGCCGGGAAAATGT+TGG - chr3.4:93243238-93243257 MS.gene67061:CDS 50.0%
GTCATTCCAATGTGGCCAGA+AGG - chr3.4:93244524-93244543 MS.gene67061:intron 50.0%
TCAATGCCAATGCAAGCCAG+AGG - chr3.4:93242604-93242623 MS.gene67061:CDS 50.0%
TCTTACCCTCTCGGTTTCCA+AGG + chr3.4:93244688-93244707 None:intergenic 50.0%
TGGAGTAGAACGGTATGTGC+CGG - chr3.4:93243227-93243246 MS.gene67061:CDS 50.0%
TTCCATCACCAGGGTTACGT+GGG + chr3.4:93243551-93243570 None:intergenic 50.0%
! ACTGACTGGGGTTGACTCAT+GGG + chr3.4:93241709-93241728 None:intergenic 50.0%
! TACTGACTGGGGTTGACTCA+TGG + chr3.4:93241710-93241729 None:intergenic 50.0%
! TGGGGTTGACTCATGGGAAT+TGG + chr3.4:93241703-93241722 None:intergenic 50.0%
!!! CCTTTTTCAGCGGCTTCTGT+TGG + chr3.4:93244263-93244282 None:intergenic 50.0%
AAGGTGGTCCTAGAGAGCCA+TGG - chr3.4:93244003-93244022 MS.gene67061:intron 55.0%
AGGGAACATGCACAAGCGTG+GGG - chr3.4:93242543-93242562 MS.gene67061:CDS 55.0%
CAAGGGAACATGCACAAGCG+TGG - chr3.4:93242541-93242560 MS.gene67061:CDS 55.0%
CTTCCATCACCAGGGTTACG+TGG + chr3.4:93243552-93243571 None:intergenic 55.0%
GCGGCTTCTGTTGGATCTTG+AGG + chr3.4:93244254-93244273 None:intergenic 55.0%
GGAGTAGAACGGTATGTGCC+GGG - chr3.4:93243228-93243247 MS.gene67061:CDS 55.0%
! GTTTTGTGCCCACGTAACCC+TGG - chr3.4:93243540-93243559 MS.gene67061:CDS 55.0%
! TCAGGTTCTGGTGCCTCTGT+AGG + chr3.4:93244728-93244747 None:intergenic 55.0%
!! ATCGATGCTGGTGCTGCTTC+TGG - chr3.4:93244224-93244243 MS.gene67061:intron 55.0%
TGCCCACGTAACCCTGGTGA+TGG - chr3.4:93243546-93243565 MS.gene67061:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 93241223 93245494 93241223 ID=MS.gene67061
chr3.4 mRNA 93241223 93245494 93241223 ID=MS.gene67061.t1;Parent=MS.gene67061
chr3.4 exon 93245489 93245494 93245489 ID=MS.gene67061.t1.exon1;Parent=MS.gene67061.t1
chr3.4 CDS 93245489 93245494 93245489 ID=cds.MS.gene67061.t1;Parent=MS.gene67061.t1
chr3.4 exon 93244092 93244172 93244092 ID=MS.gene67061.t1.exon2;Parent=MS.gene67061.t1
chr3.4 CDS 93244092 93244172 93244092 ID=cds.MS.gene67061.t1;Parent=MS.gene67061.t1
chr3.4 exon 93242919 93243948 93242919 ID=MS.gene67061.t1.exon3;Parent=MS.gene67061.t1
chr3.4 CDS 93242919 93243948 93242919 ID=cds.MS.gene67061.t1;Parent=MS.gene67061.t1
chr3.4 exon 93241902 93242729 93241902 ID=MS.gene67061.t1.exon4;Parent=MS.gene67061.t1
chr3.4 CDS 93241902 93242729 93241902 ID=cds.MS.gene67061.t1;Parent=MS.gene67061.t1
chr3.4 exon 93241223 93241668 93241223 ID=MS.gene67061.t1.exon5;Parent=MS.gene67061.t1
chr3.4 CDS 93241223 93241668 93241223 ID=cds.MS.gene67061.t1;Parent=MS.gene67061.t1
Gene Sequence

>MS.gene67061

ATGGGCGTAAGTTTTTAGCATGTCTTTTGCTAAAAAAAAACTCCAATTTTATTGTTTTTGACTCCTAATTACACCCTCAGTCAAGATAGTAATTATGAGTTATTTTATTGTTACTCCCTCCGTCTCACAATAATTGTCACTTTACCATTTTTTTTCTTTTTCTCAAAATAATTGTTACTTTAGAATACCAATGCAGCATTTATTATTTTTTTCCATTAATATACTCTTATTTATTGAATTTCATCCAACTTAACTACTCTACTAAGTACAATTAATAAGGATGTTTTAGTAAATGACACTAATTTTATTATCAAAATCAACCCAACTAATCATTTCATTAATAACCGTGCACAAACCTTAAACAACTATAATTTAGAGACGGAGGGAGTATTATTGTATAGAAAAGCGTAAGCAATTTCGATATGACAATATGTTTATATCAAATTTGGTATGATTATTGGTTATTTTACCAAAGGACCAATTCCCATGAGTCAACCCCAGTCAGTACTCATAGCATGAGAGGGAAGATGCTGTTCCTAATTCCCACACAAGGCATGAACAAAGTGATATTGAAATATTAGTTAAACGGTAATCTGGTTCTTTCTTGCAGAATACCTCTTCCTTGAAAGTTAAGGTGGGAACTGATTCCAACATACTTGAGAAAATATAAATTAAAGGAATCACTCTTTAAACATCTCTTCCTTGACTTTAAAGTTTAAGACAATAGATGGATCAGATTCTCCCCTCTCTTTGCCCATCTTTAAGTCTCTGCCTATAAATCTACCAATTCAAACCAAACCAAGGCATTCATCATAAGGATAAAGACAGTATCATCATCAACATTTTCCCTCCTTAACCTCCATTTCCATGTAATTGTACTCTTACTTATTACATCTACATGAAAATTTCACTTTTGCATTATTTCATGTATGTATGACACTTGTTTTTATTGCACACAGCAAGGGAGAAAGAAACATAAACTATCTATAACGTCATGTTGCACTTACTACACGGGAAGCTTGATGTGACTATATATGAGGTCGATACACTACAAACTCTTGCCGGATGCAATTTCGATCTCTGCAACAAGGTGCTCTTAATCACAATACTGTCTCTATGTTAATCTTTCCAATTTCATTTTAAGTAGATTGACTAAAGCTTCTCAATTTAAAAATTGTATCATATTTATTAAAATCCTTTTTTCTAATGAATTTGTCATCACATAAAATGTACTTATATTTTTGTACATGTCAAATTTAAATTGCATTATAGTATAGCCTCTGTGTATTTGCTGATTTATGCTTTCAAATTTCGTAAACAAGGGAACATGCACAAGCGTGGGGAAGAAAATTCTGTCACAAGTCAAGAGTTGTTTTCTATGTCAATGCCAATGCAAGCCAGAGGTATATCTTCACATATTAATTTATTTCCTTGTTGACTATATAATCTGTAATGTAATTATGTAACATACTTCATTATTTTTCTAATCACATAAAGTTCCCTTTATACATTCTAACACCTAACGACATGTAAAAACATTTCACAGATTATTGGGATGGGTCTATATGCAACAGTTGATTTAGACAAAGCAAGAGTTGGAAGAACTAGAATGATAGGTAGCCCGAAATGGAATGAAACCTTTCACATTTACTCTGCACATTCAATCTCCAGCATTATATTCACTGTCAAACAAGATAACCCCATTGGAGCGACTCTAATTGGAAGAGCTTATGTTCCAGTTGAACAAGTCATAAAGGGCAACATAGTGAATACATGGGTTAATATATTAGATGTGGATCATCGTCCAATACAAGGCGGTTCCAAAATCCATGTTCAAATACAATTCTCACATGTTAAAAATGATCCAAACTGGTCACAAGGACTAAAGAGTCCAGGATTTCAAGGAGTTCCTCACACATTCTTTAAACAAAATAATGGTTGCCAAATTACTCTTTACCAAGATGCACATGTTCTAGATGGTTCTGTTCCGTATATTCCATTGGATGGAGTAGAACGGTATGTGCCGGGAAAATGTTGGGAAGATACTTACAATGCAATTAATGATGCTAAGCATTTTATTTGCATAACTGGTTGGTCTGTTTACACGGAAATAACCTTGATTAGAGATCCAAACAAGTCAACAAGAACAACCATCACTCTTGGGGAGCTTCTTAAGAAGAAAGCCAATGAAGGTGTTAATGTTCTTATGCTTGTTTGGGATGACAGAACTTCTGTTCCTGACTTTAAGAAAGATGGCTTGATGGCAACTCATGATCAAGAAATAGCAGAGTATTTTAGAAACACAAATGTGCATTGTGTTTTGTGCCCACGTAACCCTGGTGATGGAAGAAGTATAGTTCAAGGTTTTGAAATTTCAACTATGTTTACTCATCACCAGAAGACTATAATTGTTGACAGCAAAGTTGCTAGTTCTGCACAATGGAAGAAGAGAACAATCACAAGTTTTGTTGGTGGGATTGATCTTTGTGATGGGAGATATGATACCATGGAACATCCTTTGTTTTCAACTTTGAATACAATTCATCATGATGATTTTCATCAACCAAATTTCCCAGGTGATTTTGGAACTAGTTTTAAATTAATCACTTAAAAGACATGTTTGATACATAGATATAATATTACAATCATATATTAGTGTAGAAGTCAAATAAACATATGAGCATGCATATTTACAATCTTAGGACTTAATTATGAAATGTTGGTTTATCAAATATAATTAAATAAAATATAAAATATTCCAACAGGTGCTTCTATTAACAAAGGTGGTCCTAGAGAGCCATGGCATGATATTCATTGTAAACTAGAAGGACCTGTTGCATGGGATGTGTTGTGCAATTTTGAGCAAAGATGGGAAAAGCAAGTTGGAAAGCAATTAATTCCACTACCTTCAAGCATGTTTCGTGAATATGATATTGCTCGTGTATCGAATGTTGCCACGGCAAATCAAAACAACACATGGAATGTTCAATTGTTTAGATCGATCGATGCTGGTGCTGCTTCTGGCTTCCCTCAAGATCCAACAGAAGCCGCTGAAAAAGGTCTTGTTACTGGAAAAGATAACATCATTGATAGAAGCATTCAAGATGCCTACATAAACGCTATTCGACGAGCTAAGAACTTCGTCTACATTGAAAATCAGTATTTTCTAGGTAGTTCATATGGTTGGAAATCATCGGATATTAAAGTTGAGGATATTGGTGCTTTGCACCTCATACCAAAGGAGTTGTCACTGAAGATTGTTAGCAAGATTGAAGCTGGAGAGAGATTCTCTGTGTACATTGTCATTCCAATGTGGCCAGAAGGTATACCTGAAAGTGCTTCAGTTCAAGCAATATTAGATTGGCAAAGAAGGACTATGGAGATGATGTATTCTGACATAGTTGAAGCCCTTCAAAGAAAAGGAATCAGAGCCAACCCAAGAGATTACTTGTCATTTTATTGCCTTGGAAACCGAGAGGGTAAGAAAATGAATGAATATACTCCTACAGAGGCACCAGAACCTGACAGTGATTATATTAGAGCACAAAATTCTAGAAGATTCATGATATATGTTCATGCCAAAATGATGATAGGTAAGGGATCCAACATATATATTACCTGTTTCTATTTTACATTTATTAGTGACACTGCTAACTATTTTACAACTGTTCCCGAAGATATTTGAACTGCGTTCTTTGAGGTTACATGATCAAATTCTTACCATTAAATTGACACTTTCCAATTAATTAGCACATACACCTTTGCAAAAGAAAATTTATTAACACATTCTTGTGACTTTTTTTTTTTTTTTTGCTTCTTCATTCAGTTGATGATGAATACATAATCATTGGTTCTGCCAACATAAATCAAAGATCAATGGATGGTGCTAGAGACAGTGAGATTGCAATAGGTGCATTTCAACCAAACCATATAGCCACCAGTAATAGACCACCAAAAGGACAAATATATGGATTTAGACGTGCACTATGGTATGAGCACCTTGGAGATATTGGTGATACAAGCTTCTTTGAAAATCCAGAAAGTTTGAATTGCATTAAGCTTGTAAATCGTTTTGCTGAGACCAATTGGGACATATACTCAAAGGATGCATTTGATGAATACAGATCATTTCATCACCTCATGCATTATCCAATACAAGTAACCAATAATGGAACCATAACTGCTCTTCCAGGATTTGAATGTTTTCCTGATACTAAGGCTAAGATTCTAGGTTCCAAATCTGAGTACCTTCCTCCAATTCTCACCACCTAG
Protein sequence

>MS.gene67061.t1

MGGTCTSVGKKILSQVKSCFLCQCQCKPEIIGMGLYATVDLDKARVGRTRMIGSPKWNETFHIYSAHSISSIIFTVKQDNPIGATLIGRAYVPVEQVIKGNIVNTWVNILDVDHRPIQGGSKIHVQIQFSHVKNDPNWSQGLKSPGFQGVPHTFFKQNNGCQITLYQDAHVLDGSVPYIPLDGVERYVPGKCWEDTYNAINDAKHFICITGWSVYTEITLIRDPNKSTRTTITLGELLKKKANEGVNVLMLVWDDRTSVPDFKKDGLMATHDQEIAEYFRNTNVHCVLCPRNPGDGRSIVQGFEISTMFTHHQKTIIVDSKVASSAQWKKRTITSFVGGIDLCDGRYDTMEHPLFSTLNTIHHDDFHQPNFPGASINKGGPREPWHDIHCKLEGPVAWDVLCNFEQRWEKQVGKQLIPLPSSMFREYDIARVSNVATANQNNTWNVQLFRSIDAGAASGFPQDPTEAAEKGLVTGKDNIIDRSIQDAYINAIRRAKNFVYIENQYFLGSSYGWKSSDIKVEDIGALHLIPKELSLKIVSKIEAGERFSVYIVIPMWPEGIPESASVQAILDWQRRTMEMMYSDIVEALQRKGIRANPRDYLSFYCLGNREGKKMNEYTPTEAPEPDSDYIRAQNSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAIGAFQPNHIATSNRPPKGQIYGFRRALWYEHLGDIGDTSFFENPESLNCIKLVNRFAETNWDIYSKDAFDEYRSFHHLMHYPIQVTNNGTITALPGFECFPDTKAKILGSKSEYLPPILTT