Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67144.t1 | XP_003589173.1 | 95.9 | 410 | 17 | 0 | 1 | 410 | 211 | 620 | 7.20E-211 | 743 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67144.t1 | A0A072VDZ7 | 95.9 | 410 | 17 | 0 | 1 | 410 | 149 | 558 | 5.2e-211 | 743.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051067 | MS.gene67144 | 0.807566 | 4.75E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67144.t1 | MTR_1g019280 | 97.805 | 410 | 9 | 0 | 1 | 410 | 211 | 620 | 0.0 | 830 |
| MS.gene67144.t1 | MTR_1g019280 | 97.805 | 410 | 9 | 0 | 1 | 410 | 149 | 558 | 0.0 | 829 |
| MS.gene67144.t1 | MTR_5g017290 | 39.310 | 435 | 196 | 17 | 10 | 409 | 2 | 403 | 1.83e-59 | 199 |
| MS.gene67144.t1 | MTR_8g023130 | 29.046 | 241 | 142 | 5 | 193 | 407 | 222 | 459 | 1.18e-19 | 90.9 |
| MS.gene67144.t1 | MTR_8g079482 | 24.623 | 398 | 242 | 14 | 52 | 407 | 54 | 435 | 5.60e-15 | 76.6 |
| MS.gene67144.t1 | MTR_8g079482 | 24.623 | 398 | 242 | 14 | 52 | 407 | 144 | 525 | 9.47e-15 | 76.3 |
| MS.gene67144.t1 | MTR_8g080180 | 37.255 | 102 | 64 | 0 | 299 | 400 | 247 | 348 | 2.49e-14 | 74.3 |
| MS.gene67144.t1 | MTR_8g031370 | 35.577 | 104 | 66 | 1 | 303 | 405 | 97 | 200 | 2.85e-12 | 65.9 |
| MS.gene67144.t1 | MTR_7g091990 | 37.500 | 96 | 60 | 0 | 289 | 384 | 163 | 258 | 1.90e-11 | 64.7 |
| MS.gene67144.t1 | MTR_7g076730 | 31.731 | 104 | 70 | 1 | 303 | 405 | 30 | 133 | 2.88e-11 | 61.2 |
| MS.gene67144.t1 | MTR_1g100647 | 35.577 | 104 | 66 | 1 | 303 | 405 | 106 | 209 | 3.27e-11 | 62.8 |
| MS.gene67144.t1 | MTR_1g052560 | 36.458 | 96 | 61 | 0 | 289 | 384 | 157 | 252 | 3.59e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67144.t1 | AT1G45207 | 51.074 | 419 | 157 | 15 | 1 | 410 | 170 | 549 | 3.37e-110 | 335 |
| MS.gene67144.t1 | AT1G45207 | 50.472 | 424 | 157 | 16 | 1 | 410 | 171 | 555 | 1.15e-107 | 328 |
| MS.gene67144.t1 | AT4G36970 | 40.281 | 427 | 190 | 16 | 20 | 405 | 12 | 414 | 2.20e-45 | 162 |
| MS.gene67144.t1 | AT2G02170 | 27.763 | 371 | 214 | 11 | 72 | 410 | 11 | 359 | 4.24e-19 | 88.6 |
| MS.gene67144.t1 | AT2G02170 | 27.763 | 371 | 214 | 11 | 72 | 410 | 11 | 359 | 4.24e-19 | 88.6 |
| MS.gene67144.t1 | AT2G02170 | 27.763 | 371 | 214 | 11 | 72 | 410 | 136 | 484 | 1.43e-18 | 87.8 |
| MS.gene67144.t1 | AT2G02170 | 27.763 | 371 | 214 | 11 | 72 | 410 | 136 | 484 | 1.43e-18 | 87.8 |
| MS.gene67144.t1 | AT2G02170 | 27.763 | 371 | 214 | 11 | 72 | 410 | 136 | 484 | 1.43e-18 | 87.8 |
| MS.gene67144.t1 | AT2G02170 | 27.763 | 371 | 214 | 11 | 72 | 410 | 136 | 484 | 1.43e-18 | 87.8 |
| MS.gene67144.t1 | AT1G30320 | 25.798 | 376 | 203 | 14 | 69 | 410 | 175 | 508 | 5.93e-17 | 83.2 |
| MS.gene67144.t1 | AT1G67590 | 32.178 | 202 | 121 | 5 | 205 | 400 | 141 | 332 | 1.99e-14 | 74.3 |
| MS.gene67144.t1 | AT1G53860 | 23.200 | 375 | 198 | 17 | 69 | 408 | 119 | 438 | 2.17e-12 | 68.9 |
| MS.gene67144.t1 | AT1G53860 | 26.033 | 242 | 140 | 11 | 195 | 408 | 140 | 370 | 2.75e-12 | 68.2 |
| MS.gene67144.t1 | AT3G61260 | 34.615 | 104 | 67 | 1 | 303 | 405 | 109 | 212 | 5.28e-12 | 65.5 |
| MS.gene67144.t1 | AT3G57540 | 34.783 | 92 | 60 | 0 | 293 | 384 | 181 | 272 | 2.92e-11 | 64.3 |
| MS.gene67144.t1 | AT2G41870 | 33.333 | 96 | 64 | 0 | 289 | 384 | 155 | 250 | 8.98e-11 | 62.8 |
Find 131 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGAACGTTGCCGTCTAAA+TGG | 0.214560 | 1.3:+4195319 | MS.gene67144:CDS |
| GAGTATCTCTTTCTCTAAAA+TGG | 0.225892 | 1.3:+4196360 | MS.gene67144:CDS |
| TTGTTTGTCCCAGGGCTAAA+AGG | 0.256081 | 1.3:+4197034 | MS.gene67144:intron |
| CTTTCTCTAAAATGGATATC+AGG | 0.259197 | 1.3:+4196368 | MS.gene67144:CDS |
| AGCTACCCTCTGGGCTCATC+TGG | 0.267123 | 1.3:-4196264 | None:intergenic |
| ACTGAAATTCGCTCAGAAAA+AGG | 0.296875 | 1.3:+4197689 | MS.gene67144:CDS |
| GAATAGGGCCTTGTGTTTCT+TGG | 0.297375 | 1.3:-4196431 | None:intergenic |
| CTCACAAGGTTATGTCATTT+CGG | 0.301601 | 1.3:+4197769 | MS.gene67144:CDS |
| GAATGCTGTAGAAGCTTAAA+AGG | 0.304020 | 1.3:-4197838 | None:intergenic |
| CATAACCTTGTGAGAACTTC+TGG | 0.313252 | 1.3:-4197760 | None:intergenic |
| CTGAACCTCTACCAGTGAAT+AGG | 0.332401 | 1.3:-4196447 | None:intergenic |
| GCATTAACAGCAGCAGAAAA+AGG | 0.359752 | 1.3:-4195534 | None:intergenic |
| CACCATTACCAACTTGCTTC+CGG | 0.360198 | 1.3:-4195272 | None:intergenic |
| TGACGATAATTCGGAGTTCC+AGG | 0.366291 | 1.3:-4195189 | None:intergenic |
| AGAGAAAGAAGTCCTCATAT+TGG | 0.380866 | 1.3:-4196299 | None:intergenic |
| GATGGGTTTACAAATAGTTC+TGG | 0.388906 | 1.3:+4195564 | MS.gene67144:CDS |
| GGAGAAGTTTGATGCTTTCA+AGG | 0.390085 | 1.3:+4196192 | MS.gene67144:CDS |
| TCTGGTGGCAATGGTGGTGG+AGG | 0.393951 | 1.3:+4195582 | MS.gene67144:CDS |
| TATGGTTCAGACTAGGAAAT+CGG | 0.396156 | 1.3:+4195128 | MS.gene67144:CDS |
| TCGGGAACGGGTACAGTGAC+GGG | 0.403774 | 1.3:+4195147 | MS.gene67144:CDS |
| CTGCGTTGTGTTTAAGTAAT+GGG | 0.406242 | 1.3:+4195298 | MS.gene67144:CDS |
| GAGAAAGAAGTCCTCATATT+GGG | 0.411403 | 1.3:-4196298 | None:intergenic |
| CCAGCACTCGATCTTCATCT+TGG | 0.432083 | 1.3:+4196500 | MS.gene67144:CDS |
| GCTGTTAATGCCTCAGCTGA+TGG | 0.434402 | 1.3:+4195546 | MS.gene67144:CDS |
| CCTTGACAATGACGATAATT+CGG | 0.435234 | 1.3:-4195198 | None:intergenic |
| TTTGCTATTTCAGATGAAGT+TGG | 0.436926 | 1.3:+4197626 | MS.gene67144:intron |
| TGGAGCTATGAAGAAGAGTA+TGG | 0.441511 | 1.3:+4195110 | None:intergenic |
| GGTGGTGTTGCAATGCAAAA+AGG | 0.444448 | 1.3:+4195219 | MS.gene67144:CDS |
| TGAACCTCTACCAGTGAATA+GGG | 0.445517 | 1.3:-4196446 | None:intergenic |
| TGTTTGTCCCAGGGCTAAAA+GGG | 0.458702 | 1.3:+4197035 | MS.gene67144:intron |
| TATTCGTTGTATTCGCCTGC+AGG | 0.459546 | 1.3:+4195471 | MS.gene67144:CDS |
| CTGTTAATGCCTCAGCTGAT+GGG | 0.464443 | 1.3:+4195547 | MS.gene67144:CDS |
| CAGCACTCGATCTTCATCTT+GGG | 0.467973 | 1.3:+4196501 | MS.gene67144:CDS |
| AAACACAAGGCCCTATTCAC+TGG | 0.468324 | 1.3:+4196436 | MS.gene67144:CDS |
| ACATGGATGCTCTCAGATGC+AGG | 0.472253 | 1.3:+4195650 | MS.gene67144:CDS |
| ACGGGTACAGTGACGGGGAC+TGG | 0.473096 | 1.3:+4195153 | MS.gene67144:CDS |
| TTTCGGAGAGCCGGCCAGAT+GGG | 0.473847 | 1.3:+4197786 | MS.gene67144:CDS |
| GAGGAGCATGAGCTACCCTC+TGG | 0.483081 | 1.3:-4196274 | None:intergenic |
| CCAAGATGAAGATCGAGTGC+TGG | 0.484979 | 1.3:-4196500 | None:intergenic |
| TCTGCAAATCTGTGACAGGC+AGG | 0.489008 | 1.3:-4196339 | None:intergenic |
| GAGAACGTTGCCGTCTAAAT+GGG | 0.489634 | 1.3:+4195320 | MS.gene67144:CDS |
| AGCGGACCACTCTTCGACTT+AGG | 0.491435 | 1.3:-4195426 | None:intergenic |
| ATTTCGGAGAGCCGGCCAGA+TGG | 0.493284 | 1.3:+4197785 | MS.gene67144:CDS |
| TTAGGTCTCCTCAGTGGCTG+TGG | 0.494524 | 1.3:-4195408 | None:intergenic |
| GGCCAGATGGGTTCTTTGAG+TGG | 0.494804 | 1.3:+4197798 | MS.gene67144:CDS |
| GTTTGATGCTTTCAAGGATG+CGG | 0.497959 | 1.3:+4196198 | MS.gene67144:CDS |
| ACTGGTACATTTCCGAGTCC+TGG | 0.500376 | 1.3:+4195171 | MS.gene67144:CDS |
| AGTGGTCCGCTTGGTCCACC+TGG | 0.500934 | 1.3:+4195438 | MS.gene67144:CDS |
| TTTGTTCATAATCTTATCCA+TGG | 0.503384 | 1.3:-4197667 | None:intergenic |
| CGCATGGGAAAATTTGCAAA+AGG | 0.505130 | 1.3:+4197074 | MS.gene67144:CDS |
| CTGGTGGCAATGGTGGTGGA+GGG | 0.506953 | 1.3:+4195583 | MS.gene67144:CDS |
| AGTTCTGGTGGCAATGGTGG+TGG | 0.506963 | 1.3:+4195579 | MS.gene67144:CDS |
| GGCCGGAAGCAAGTTGGTAA+TGG | 0.508505 | 1.3:+4195270 | MS.gene67144:CDS |
| AATGGATATCAGGGATGTGC+AGG | 0.513273 | 1.3:+4196378 | MS.gene67144:CDS |
| TTCTGGCAACTTGATGAGCC+TGG | 0.515342 | 1.3:-4197743 | None:intergenic |
| GTTCAGAAAATGTTGACAGC+TGG | 0.516670 | 1.3:+4196464 | MS.gene67144:CDS |
| ACAAATAGTTCTGGTGGCAA+TGG | 0.516869 | 1.3:+4195573 | MS.gene67144:CDS |
| AACCACTCAAAGAACCCATC+TGG | 0.516973 | 1.3:-4197800 | None:intergenic |
| GTTATGTCATTTCGGAGAGC+CGG | 0.517925 | 1.3:+4197777 | MS.gene67144:CDS |
| TTTCTCTAAAATGGATATCA+GGG | 0.518025 | 1.3:+4196369 | MS.gene67144:CDS |
| GCTCGCTCAGTTAGTGTACA+TGG | 0.518862 | 1.3:+4195633 | MS.gene67144:CDS |
| ACGTCCCTTCTTGAAACAGC+AGG | 0.521294 | 1.3:-4196235 | None:intergenic |
| AGTTCTGAGCGAGTTGTAAG+TGG | 0.522590 | 1.3:+4195246 | MS.gene67144:CDS |
| CAGACTAGGAAATCGGGAAC+GGG | 0.526664 | 1.3:+4195135 | MS.gene67144:CDS |
| CATGCTCCTCTCCCAATATG+AGG | 0.528342 | 1.3:+4196287 | MS.gene67144:CDS |
| ATGGTTCAGACTAGGAAATC+GGG | 0.530303 | 1.3:+4195129 | MS.gene67144:CDS |
| TTTGATGCTTTCAAGGATGC+GGG | 0.530327 | 1.3:+4196199 | MS.gene67144:CDS |
| GCTACCCTCTGGGCTCATCT+GGG | 0.532927 | 1.3:-4196263 | None:intergenic |
| ATACTCTGCAAATCTGTGAC+AGG | 0.542169 | 1.3:-4196343 | None:intergenic |
| ATCGGGAACGGGTACAGTGA+CGG | 0.542516 | 1.3:+4195146 | MS.gene67144:CDS |
| GTTCTGAGCGAGTTGTAAGT+GGG | 0.543456 | 1.3:+4195247 | MS.gene67144:CDS |
| TTTCTTGGACCACCTTGTCA+TGG | 0.550513 | 1.3:-4196416 | None:intergenic |
| TATCCCCTGCTGTTTCAAGA+AGG | 0.551655 | 1.3:+4196230 | MS.gene67144:CDS |
| AGAAGCTTAAAAGGCATGAC+AGG | 0.558480 | 1.3:-4197829 | None:intergenic |
| TGCTGTTTCAAGAAGGGACG+TGG | 0.560248 | 1.3:+4196237 | MS.gene67144:CDS |
| TGAAACAGCAGGGGATACAT+TGG | 0.561049 | 1.3:-4196224 | None:intergenic |
| TCCGCATCTTCCCATTTAGA+CGG | 0.561076 | 1.3:-4195330 | None:intergenic |
| TCTGTGACAGGCAGGGAAGG+TGG | 0.564885 | 1.3:-4196331 | None:intergenic |
| ACTGCGTTGTGTTTAAGTAA+TGG | 0.567379 | 1.3:+4195297 | MS.gene67144:CDS |
| CACACGAACGGATCCTTGCA+TGG | 0.568343 | 1.3:+4195611 | MS.gene67144:CDS |
| GAGTTCAGTTTCAGTCGACC+AGG | 0.570124 | 1.3:+4197725 | MS.gene67144:CDS |
| AGAAGTCCTCATATTGGGAG+AGG | 0.571056 | 1.3:-4196293 | None:intergenic |
| AAAGAAGCGAGCATCTTCCA+TGG | 0.572035 | 1.3:+4197650 | MS.gene67144:CDS |
| TCAGACTAGGAAATCGGGAA+CGG | 0.573486 | 1.3:+4195134 | MS.gene67144:CDS |
| GACAGGCAGGGAAGGTGGAG+TGG | 0.575448 | 1.3:-4196326 | None:intergenic |
| TAATTCGGAGTTCCAGGACT+CGG | 0.576781 | 1.3:-4195183 | None:intergenic |
| CATGCAAGGATCCGTTCGTG+TGG | 0.580587 | 1.3:-4195610 | None:intergenic |
| AATGGGAAGATGCGGAGAGG+TGG | 0.589464 | 1.3:+4195337 | MS.gene67144:CDS |
| CCGAATTATCGTCATTGTCA+AGG | 0.589710 | 1.3:+4195198 | MS.gene67144:CDS |
| CTGCAAATCTGTGACAGGCA+GGG | 0.591776 | 1.3:-4196338 | None:intergenic |
| AAATCTGTGACAGGCAGGGA+AGG | 0.591907 | 1.3:-4196334 | None:intergenic |
| AGGAGCATGAGCTACCCTCT+GGG | 0.594386 | 1.3:-4196273 | None:intergenic |
| AGGAAGCCAAAATCACCGCA+TGG | 0.595215 | 1.3:+4197058 | MS.gene67144:CDS |
| AAGGCCCTATTCACTGGTAG+AGG | 0.600698 | 1.3:+4196442 | MS.gene67144:CDS |
| GGGTTTACAAATAGTTCTGG+TGG | 0.601682 | 1.3:+4195567 | MS.gene67144:CDS |
| ATCCCCTGCTGTTTCAAGAA+GGG | 0.605703 | 1.3:+4196231 | MS.gene67144:CDS |
| GGAAGCCAAAATCACCGCAT+GGG | 0.605836 | 1.3:+4197059 | MS.gene67144:CDS |
| AAGTCGAAGAGTGGTCCGCT+TGG | 0.609344 | 1.3:+4195429 | MS.gene67144:CDS |
| CGTCCCTTCTTGAAACAGCA+GGG | 0.613528 | 1.3:-4196234 | None:intergenic |
| TGGAGGGCTTCCCACACGAA+CGG | 0.615766 | 1.3:+4195599 | MS.gene67144:CDS |
| AACGAATAATACGCAACACC+AGG | 0.618153 | 1.3:-4195456 | None:intergenic |
| CTAACTGAGCGAGCCATGCA+AGG | 0.618650 | 1.3:-4195624 | None:intergenic |
| AGAAGAGTATGGTTCAGACT+AGG | 0.619003 | 1.3:+4195121 | MS.gene67144:CDS |
| CGGGAACGGGTACAGTGACG+GGG | 0.623331 | 1.3:+4195148 | MS.gene67144:CDS |
| AATAGTTCTGGTGGCAATGG+TGG | 0.623434 | 1.3:+4195576 | MS.gene67144:CDS |
| TTCTGAGCGAGTTGTAAGTG+GGG | 0.623568 | 1.3:+4195248 | MS.gene67144:CDS |
| GCAACCCAGATGAGCCCAGA+GGG | 0.624147 | 1.3:+4196259 | MS.gene67144:CDS |
| GCCGTCTAAATGGGAAGATG+CGG | 0.624201 | 1.3:+4195329 | MS.gene67144:CDS |
| GAATAATACGCAACACCAGG+TGG | 0.633920 | 1.3:-4195453 | None:intergenic |
| CAATCGTCGATTCCTTCCCG+AGG | 0.641783 | 1.3:+4195675 | MS.gene67144:CDS |
| CATGGATGCTCTCAGATGCA+GGG | 0.641801 | 1.3:+4195651 | MS.gene67144:CDS |
| GGCAACCCAGATGAGCCCAG+AGG | 0.642427 | 1.3:+4196258 | MS.gene67144:CDS |
| TTGTCCCAGGGCTAAAAGGG+AGG | 0.643693 | 1.3:+4197038 | MS.gene67144:intron |
| TTAGCATAACAACCTCGGGA+AGG | 0.645636 | 1.3:-4195687 | None:intergenic |
| GGATATCAGGGATGTGCAGG+TGG | 0.646158 | 1.3:+4196381 | MS.gene67144:CDS |
| ATGCAAGGATCCGTTCGTGT+GGG | 0.646814 | 1.3:-4195609 | None:intergenic |
| ATTTGTAAACCCATCAGCTG+AGG | 0.649726 | 1.3:-4195556 | None:intergenic |
| GCAACACCAGGTGGACCAAG+CGG | 0.656850 | 1.3:-4195444 | None:intergenic |
| ACTCAAAGAACCCATCTGGC+CGG | 0.658538 | 1.3:-4197796 | None:intergenic |
| TCTGAGCGAGTTGTAAGTGG+GGG | 0.659759 | 1.3:+4195249 | MS.gene67144:CDS |
| AGGAGACCTAAGTCGAAGAG+TGG | 0.659853 | 1.3:+4195420 | MS.gene67144:CDS |
| AGCAGCAATACAGAAACTAG+AGG | 0.664918 | 1.3:+4197107 | MS.gene67144:CDS |
| GTCCCTTCTTGAAACAGCAG+GGG | 0.676127 | 1.3:-4196233 | None:intergenic |
| AGTTGCCAGAAGTTCTCACA+AGG | 0.680478 | 1.3:+4197755 | MS.gene67144:CDS |
| AATTATCGTCATTGTCAAGG+TGG | 0.691775 | 1.3:+4195201 | MS.gene67144:CDS |
| TTTCAGTTCCACAGCCACTG+AGG | 0.695040 | 1.3:+4195400 | MS.gene67144:CDS |
| CTAAATGGGAAGATGCGGAG+AGG | 0.704130 | 1.3:+4195334 | MS.gene67144:CDS |
| TTCGACTTAGGTCTCCTCAG+TGG | 0.720239 | 1.3:-4195414 | None:intergenic |
| AACGTGTAACCATGACAAGG+TGG | 0.733238 | 1.3:+4196407 | MS.gene67144:CDS |
| AAGGTGGTCCAAGAAACACA+AGG | 0.772366 | 1.3:+4196423 | MS.gene67144:CDS |
| ATGAACGTGTAACCATGACA+AGG | 0.775798 | 1.3:+4196404 | MS.gene67144:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTACTTTCCTTTATTTTTA+AGG | - | chr1.3:4197578-4197597 | None:intergenic | 15.0% |
| !!! | ATTATCTTAAGTTTCATTTT+GGG | + | chr1.3:4197222-4197241 | MS.gene67144:intron | 15.0% |
| !!! | TAAAGAATTTTCTATTTTCT+AGG | - | chr1.3:4196918-4196937 | None:intergenic | 15.0% |
| !!! | TATTATCTTAAGTTTCATTT+TGG | + | chr1.3:4197221-4197240 | MS.gene67144:intron | 15.0% |
| !! | AAGATAATATATGTGTATGT+AGG | - | chr1.3:4197210-4197229 | None:intergenic | 20.0% |
| !! | TATGATGAAGTAAAAAAAAG+TGG | - | chr1.3:4197478-4197497 | None:intergenic | 20.0% |
| !!! | TCTTTATATGACATTGATTT+CGG | - | chr1.3:4196639-4196658 | None:intergenic | 20.0% |
| !!! | TTTAGAATTTTAATATGCTC+TGG | + | chr1.3:4195896-4195915 | MS.gene67144:intron | 20.0% |
| !!! | TTTTTTCATCTGCTAAATAA+AGG | + | chr1.3:4196589-4196608 | MS.gene67144:intron | 20.0% |
| ! | ATTCATTAAATCAGAGTCTT+TGG | + | chr1.3:4195943-4195962 | MS.gene67144:intron | 25.0% |
| ! | TTATTACCACCTTTCAAATA+TGG | + | chr1.3:4196864-4196883 | MS.gene67144:intron | 25.0% |
| ! | TTTGTTCATAATCTTATCCA+TGG | - | chr1.3:4197670-4197689 | None:intergenic | 25.0% |
| !!! | AAAACTCATATTACTGACTT+AGG | + | chr1.3:4196971-4196990 | MS.gene67144:intron | 25.0% |
| !!! | ATTGACTTGCTTTTACTATT+GGG | + | chr1.3:4197332-4197351 | MS.gene67144:intron | 25.0% |
| !!! | CACTAAATTTGCTATGTTAT+TGG | + | chr1.3:4196788-4196807 | MS.gene67144:intron | 25.0% |
| !!! | CCTTTATTTTTAAGGAGAAA+GGG | - | chr1.3:4197570-4197589 | None:intergenic | 25.0% |
| !!! | TATGTTTTGAATCTGATTTG+CGG | + | chr1.3:4195996-4196015 | MS.gene67144:intron | 25.0% |
| !!! | TATTGACTTGCTTTTACTAT+TGG | + | chr1.3:4197331-4197350 | MS.gene67144:intron | 25.0% |
| !!! | TCCTTTATTTTTAAGGAGAA+AGG | - | chr1.3:4197571-4197590 | None:intergenic | 25.0% |
| !!! | TTTCTCTAAAATGGATATCA+GGG | + | chr1.3:4196369-4196388 | MS.gene67144:CDS | 25.0% |
| !!! | TTTTCTAGGTTGAATTGAAT+AGG | - | chr1.3:4196904-4196923 | None:intergenic | 25.0% |
| !!! | TTTTCTTTTCTTTTTCACGT+TGG | + | chr1.3:4196155-4196174 | MS.gene67144:intron | 25.0% |
| AAATTGAACTTAGGGAAAGA+GGG | - | chr1.3:4197289-4197308 | None:intergenic | 30.0% | |
| ACCCTGAAATAAAGAAAACA+AGG | - | chr1.3:4197254-4197273 | None:intergenic | 30.0% | |
| ACTCCAACCATATAATTTCA+AGG | - | chr1.3:4196744-4196763 | None:intergenic | 30.0% | |
| AGAGTCTTTGGATGAAAATT+GGG | + | chr1.3:4195955-4195974 | MS.gene67144:intron | 30.0% | |
| CAATCAGTACCATATTTGAA+AGG | - | chr1.3:4196876-4196895 | None:intergenic | 30.0% | |
| CACATAATACTAACATGACA+TGG | - | chr1.3:4196100-4196119 | None:intergenic | 30.0% | |
| CCCTGAAATAAAGAAAACAA+GGG | - | chr1.3:4197253-4197272 | None:intergenic | 30.0% | |
| CCCTTTCTCCTTAAAAATAA+AGG | + | chr1.3:4197567-4197586 | MS.gene67144:intron | 30.0% | |
| CTACCTTGAAATTATATGGT+TGG | + | chr1.3:4196738-4196757 | MS.gene67144:intron | 30.0% | |
| CTGTATTAACTATTGTGATG+TGG | + | chr1.3:4195825-4195844 | MS.gene67144:intron | 30.0% | |
| TAAACAAAGAACCACTTGAA+GGG | + | chr1.3:4197130-4197149 | MS.gene67144:intron | 30.0% | |
| TAAGATTAGCATAACAACCT+CGG | - | chr1.3:4195695-4195714 | None:intergenic | 30.0% | |
| TACATAAAAATCCCTTCAAG+TGG | - | chr1.3:4197144-4197163 | None:intergenic | 30.0% | |
| TATAATTTCAAGGTAGCTCA+TGG | - | chr1.3:4196734-4196753 | None:intergenic | 30.0% | |
| TCACAACTCAAAACTAGATA+AGG | - | chr1.3:4195744-4195763 | None:intergenic | 30.0% | |
| TCTTTCCCTAAGTTCAATTT+CGG | + | chr1.3:4197289-4197308 | MS.gene67144:intron | 30.0% | |
| TGAGCTACCTTGAAATTATA+TGG | + | chr1.3:4196734-4196753 | MS.gene67144:intron | 30.0% | |
| ! | GAGTATCTCTTTCTCTAAAA+TGG | + | chr1.3:4196360-4196379 | MS.gene67144:CDS | 30.0% |
| ! | GCATAATAGTTTTCATAACG+TGG | - | chr1.3:4196048-4196067 | None:intergenic | 30.0% |
| !! | AGTAAATTTTGTTTGTCCCA+GGG | + | chr1.3:4197026-4197045 | MS.gene67144:intron | 30.0% |
| !! | CTTTCTCTAAAATGGATATC+AGG | + | chr1.3:4196368-4196387 | MS.gene67144:CDS | 30.0% |
| !! | TTTGCTATTTCAGATGAAGT+TGG | + | chr1.3:4197626-4197645 | MS.gene67144:intron | 30.0% |
| !!! | CCCTTGTTTTCTTTATTTCA+GGG | + | chr1.3:4197250-4197269 | MS.gene67144:intron | 30.0% |
| !!! | TCCCTTGTTTTCTTTATTTC+AGG | + | chr1.3:4197249-4197268 | MS.gene67144:intron | 30.0% |
| AAAGGGATTCTTAATGCATG+CGG | - | chr1.3:4197553-4197572 | None:intergenic | 35.0% | |
| AAGATTAGCATAACAACCTC+GGG | - | chr1.3:4195694-4195713 | None:intergenic | 35.0% | |
| AATTATCGTCATTGTCAAGG+TGG | + | chr1.3:4195201-4195220 | MS.gene67144:CDS | 35.0% | |
| ACTGAAATTCGCTCAGAAAA+AGG | + | chr1.3:4197689-4197708 | MS.gene67144:CDS | 35.0% | |
| ACTGCGTTGTGTTTAAGTAA+TGG | + | chr1.3:4195297-4195316 | MS.gene67144:CDS | 35.0% | |
| AGAGAAAGAAGTCCTCATAT+TGG | - | chr1.3:4196302-4196321 | None:intergenic | 35.0% | |
| AGATGACCGAAATTGAACTT+AGG | - | chr1.3:4197298-4197317 | None:intergenic | 35.0% | |
| ATATCATGTACGCAGAAGTA+TGG | - | chr1.3:4196132-4196151 | None:intergenic | 35.0% | |
| ATGTAGGAGCAATAATTGCT+TGG | - | chr1.3:4197194-4197213 | None:intergenic | 35.0% | |
| CAAACTTCTCCTCTGTAAAT+TGG | - | chr1.3:4196183-4196202 | None:intergenic | 35.0% | |
| CAGAGTCTTTGGATGAAAAT+TGG | + | chr1.3:4195954-4195973 | MS.gene67144:intron | 35.0% | |
| CCTTGACAATGACGATAATT+CGG | - | chr1.3:4195201-4195220 | None:intergenic | 35.0% | |
| CTGCGTTGTGTTTAAGTAAT+GGG | + | chr1.3:4195298-4195317 | MS.gene67144:CDS | 35.0% | |
| CTGGGACAAACAAAATTTAC+TGG | - | chr1.3:4197027-4197046 | None:intergenic | 35.0% | |
| GAAATTGAACTTAGGGAAAG+AGG | - | chr1.3:4197290-4197309 | None:intergenic | 35.0% | |
| GAGAAAGAAGTCCTCATATT+GGG | - | chr1.3:4196301-4196320 | None:intergenic | 35.0% | |
| GATGACCGAAATTGAACTTA+GGG | - | chr1.3:4197297-4197316 | None:intergenic | 35.0% | |
| GGGAAAACTTCACTTCTTAT+TGG | - | chr1.3:4196667-4196686 | None:intergenic | 35.0% | |
| GTAAACAAAGAACCACTTGA+AGG | + | chr1.3:4197129-4197148 | MS.gene67144:intron | 35.0% | |
| TATGGTTCAGACTAGGAAAT+CGG | + | chr1.3:4195128-4195147 | MS.gene67144:CDS | 35.0% | |
| TCAGTACCATATTTGAAAGG+TGG | - | chr1.3:4196873-4196892 | None:intergenic | 35.0% | |
| TGGACTAATGTCATTACTGT+GGG | + | chr1.3:4197421-4197440 | MS.gene67144:intron | 35.0% | |
| ! | ATGGACTAATGTCATTACTG+TGG | + | chr1.3:4197420-4197439 | MS.gene67144:intron | 35.0% |
| ! | CTAGGTTGAATTGAATAGGA+TGG | - | chr1.3:4196900-4196919 | None:intergenic | 35.0% |
| ! | CTCACAAGGTTATGTCATTT+CGG | + | chr1.3:4197769-4197788 | MS.gene67144:CDS | 35.0% |
| ! | CTTTTGCAAATTTTCCCATG+CGG | - | chr1.3:4197076-4197095 | None:intergenic | 35.0% |
| ! | GATGGGTTTACAAATAGTTC+TGG | + | chr1.3:4195564-4195583 | MS.gene67144:CDS | 35.0% |
| ! | TAAACCGACAAGACTAGTTA+TGG | + | chr1.3:4197401-4197420 | MS.gene67144:intron | 35.0% |
| !! | CAGTAAATTTTGTTTGTCCC+AGG | + | chr1.3:4197025-4197044 | MS.gene67144:intron | 35.0% |
| !! | GTCTTGTCGGTTTAAGATAA+TGG | - | chr1.3:4197395-4197414 | None:intergenic | 35.0% |
| !! | TAGTCCATAACTAGTCTTGT+CGG | - | chr1.3:4197408-4197427 | None:intergenic | 35.0% |
| AACGAATAATACGCAACACC+AGG | - | chr1.3:4195459-4195478 | None:intergenic | 40.0% | |
| AGAAAAAGGCTCAGGAAATG+AGG | + | chr1.3:4197703-4197722 | MS.gene67144:CDS | 40.0% | |
| AGCAGCAATACAGAAACTAG+AGG | + | chr1.3:4197107-4197126 | MS.gene67144:CDS | 40.0% | |
| ATACTCTGCAAATCTGTGAC+AGG | - | chr1.3:4196346-4196365 | None:intergenic | 40.0% | |
| ATGAACGTGTAACCATGACA+AGG | + | chr1.3:4196404-4196423 | MS.gene67144:CDS | 40.0% | |
| ATGGTTCAGACTAGGAAATC+GGG | + | chr1.3:4195129-4195148 | MS.gene67144:CDS | 40.0% | |
| ATTTGTAAACCCATCAGCTG+AGG | - | chr1.3:4195559-4195578 | None:intergenic | 40.0% | |
| CATAACCTTGTGAGAACTTC+TGG | - | chr1.3:4197763-4197782 | None:intergenic | 40.0% | |
| CCGAATTATCGTCATTGTCA+AGG | + | chr1.3:4195198-4195217 | MS.gene67144:CDS | 40.0% | |
| CGCATGGGAAAATTTGCAAA+AGG | + | chr1.3:4197074-4197093 | MS.gene67144:CDS | 40.0% | |
| GATGATCACTTGAGCTAGTA+GGG | - | chr1.3:4197172-4197191 | None:intergenic | 40.0% | |
| GCATTAACAGCAGCAGAAAA+AGG | - | chr1.3:4195537-4195556 | None:intergenic | 40.0% | |
| GGAGAAGTTTGATGCTTTCA+AGG | + | chr1.3:4196192-4196211 | MS.gene67144:CDS | 40.0% | |
| GTGTTGCAATGCAAAAAGGT+TGG | + | chr1.3:4195223-4195242 | MS.gene67144:CDS | 40.0% | |
| GTTCAGAAAATGTTGACAGC+TGG | + | chr1.3:4196464-4196483 | MS.gene67144:CDS | 40.0% | |
| GTTTGATGCTTTCAAGGATG+CGG | + | chr1.3:4196198-4196217 | MS.gene67144:CDS | 40.0% | |
| TGAACCTCTACCAGTGAATA+GGG | - | chr1.3:4196449-4196468 | None:intergenic | 40.0% | |
| TTTGATGCTTTCAAGGATGC+GGG | + | chr1.3:4196199-4196218 | MS.gene67144:CDS | 40.0% | |
| ! | AGAAGAGTATGGTTCAGACT+AGG | + | chr1.3:4195121-4195140 | MS.gene67144:CDS | 40.0% |
| ! | ATTACTGTGGGCTGTCTAAT+AGG | + | chr1.3:4197433-4197452 | MS.gene67144:intron | 40.0% |
| ! | ATTTTCCCATGCGGTGATTT+TGG | - | chr1.3:4197067-4197086 | None:intergenic | 40.0% |
| ! | TGTGATGTGGATTGAACTCT+TGG | + | chr1.3:4195838-4195857 | MS.gene67144:intron | 40.0% |
| !! | ACAAATAGTTCTGGTGGCAA+TGG | + | chr1.3:4195573-4195592 | MS.gene67144:CDS | 40.0% |
| !! | GGGTTTACAAATAGTTCTGG+TGG | + | chr1.3:4195567-4195586 | MS.gene67144:CDS | 40.0% |
| !! | GTGGATTTTGAGTCCTGTTT+CGG | + | chr1.3:4195356-4195375 | MS.gene67144:CDS | 40.0% |
| !! | TGGATTTTGAGTCCTGTTTC+GGG | + | chr1.3:4195357-4195376 | MS.gene67144:CDS | 40.0% |
| AAACACAAGGCCCTATTCAC+TGG | + | chr1.3:4196436-4196455 | MS.gene67144:CDS | 45.0% | |
| AAAGAAGCGAGCATCTTCCA+TGG | + | chr1.3:4197650-4197669 | MS.gene67144:CDS | 45.0% | |
| AACCACTCAAAGAACCCATC+TGG | - | chr1.3:4197803-4197822 | None:intergenic | 45.0% | |
| AACGTGTAACCATGACAAGG+TGG | + | chr1.3:4196407-4196426 | MS.gene67144:CDS | 45.0% | |
| AAGGTGGTCCAAGAAACACA+AGG | + | chr1.3:4196423-4196442 | MS.gene67144:CDS | 45.0% | |
| AATGGATATCAGGGATGTGC+AGG | + | chr1.3:4196378-4196397 | MS.gene67144:CDS | 45.0% | |
| AGAAGTCCTCATATTGGGAG+AGG | - | chr1.3:4196296-4196315 | None:intergenic | 45.0% | |
| AGTTGCCAGAAGTTCTCACA+AGG | + | chr1.3:4197755-4197774 | MS.gene67144:CDS | 45.0% | |
| ATTCGCTCAGAAAAAGGCTC+AGG | + | chr1.3:4197695-4197714 | MS.gene67144:CDS | 45.0% | |
| CAGCACTCGATCTTCATCTT+GGG | + | chr1.3:4196501-4196520 | MS.gene67144:CDS | 45.0% | |
| CCATCAAAAAAGTGACCTGC+AGG | - | chr1.3:4195489-4195508 | None:intergenic | 45.0% | |
| CTGAACCTCTACCAGTGAAT+AGG | - | chr1.3:4196450-4196469 | None:intergenic | 45.0% | |
| CTGTTAATGCCTCAGCTGAT+GGG | + | chr1.3:4195547-4195566 | MS.gene67144:CDS | 45.0% | |
| GAATAATACGCAACACCAGG+TGG | - | chr1.3:4195456-4195475 | None:intergenic | 45.0% | |
| GAGAACGTTGCCGTCTAAAT+GGG | + | chr1.3:4195320-4195339 | MS.gene67144:CDS | 45.0% | |
| GGATGATCACTTGAGCTAGT+AGG | - | chr1.3:4197173-4197192 | None:intergenic | 45.0% | |
| TAATTCGGAGTTCCAGGACT+CGG | - | chr1.3:4195186-4195205 | None:intergenic | 45.0% | |
| TATTCGTTGTATTCGCCTGC+AGG | + | chr1.3:4195471-4195490 | MS.gene67144:CDS | 45.0% | |
| TCAAGGTAGCTCATGGCATT+TGG | - | chr1.3:4196727-4196746 | None:intergenic | 45.0% | |
| TCAGACTAGGAAATCGGGAA+CGG | + | chr1.3:4195134-4195153 | MS.gene67144:CDS | 45.0% | |
| TCCGCATCTTCCCATTTAGA+CGG | - | chr1.3:4195333-4195352 | None:intergenic | 45.0% | |
| TGAAACAGCAGGGGATACAT+TGG | - | chr1.3:4196227-4196246 | None:intergenic | 45.0% | |
| TGACGATAATTCGGAGTTCC+AGG | - | chr1.3:4195192-4195211 | None:intergenic | 45.0% | |
| TGTTTGTCCCAGGGCTAAAA+GGG | + | chr1.3:4197035-4197054 | MS.gene67144:intron | 45.0% | |
| TTAGCATAACAACCTCGGGA+AGG | - | chr1.3:4195690-4195709 | None:intergenic | 45.0% | |
| TTCTGAGCGAGTTGTAAGTG+GGG | + | chr1.3:4195248-4195267 | MS.gene67144:CDS | 45.0% | |
| TTGTTTGTCCCAGGGCTAAA+AGG | + | chr1.3:4197034-4197053 | MS.gene67144:intron | 45.0% | |
| TTTCTTGGACCACCTTGTCA+TGG | - | chr1.3:4196419-4196438 | None:intergenic | 45.0% | |
| ! | CACCATTACCAACTTGCTTC+CGG | - | chr1.3:4195275-4195294 | None:intergenic | 45.0% |
| ! | GAATAGGGCCTTGTGTTTCT+TGG | - | chr1.3:4196434-4196453 | None:intergenic | 45.0% |
| ! | GTTATGTCATTTCGGAGAGC+CGG | + | chr1.3:4197777-4197796 | MS.gene67144:CDS | 45.0% |
| ! | GTTCTGAGCGAGTTGTAAGT+GGG | + | chr1.3:4195247-4195266 | MS.gene67144:CDS | 45.0% |
| !! | AATAGTTCTGGTGGCAATGG+TGG | + | chr1.3:4195576-4195595 | MS.gene67144:CDS | 45.0% |
| !! | ACGTTGGCTCCAATTTACAG+AGG | + | chr1.3:4196171-4196190 | MS.gene67144:intron | 45.0% |
| !! | AGTTCTGAGCGAGTTGTAAG+TGG | + | chr1.3:4195246-4195265 | MS.gene67144:CDS | 45.0% |
| !! | ATCCCCTGCTGTTTCAAGAA+GGG | + | chr1.3:4196231-4196250 | MS.gene67144:CDS | 45.0% |
| !! | ATTTTGAGTCCTGTTTCGGG+GGG | + | chr1.3:4195360-4195379 | MS.gene67144:CDS | 45.0% |
| !! | GATTTTGAGTCCTGTTTCGG+GGG | + | chr1.3:4195359-4195378 | MS.gene67144:CDS | 45.0% |
| !! | GGATTTTGAGTCCTGTTTCG+GGG | + | chr1.3:4195358-4195377 | MS.gene67144:CDS | 45.0% |
| !! | GGTGGTGTTGCAATGCAAAA+AGG | + | chr1.3:4195219-4195238 | MS.gene67144:CDS | 45.0% |
| !! | TATCCCCTGCTGTTTCAAGA+AGG | + | chr1.3:4196230-4196249 | MS.gene67144:CDS | 45.0% |
| !!! | CCTGCAGGTCACTTTTTTGA+TGG | + | chr1.3:4195486-4195505 | MS.gene67144:CDS | 45.0% |
| !!! | GCAGGTCACTTTTTTGATGG+AGG | + | chr1.3:4195489-4195508 | MS.gene67144:CDS | 45.0% |
| AAATCTGTGACAGGCAGGGA+AGG | - | chr1.3:4196337-4196356 | None:intergenic | 50.0% | |
| AAGGCCCTATTCACTGGTAG+AGG | + | chr1.3:4196442-4196461 | MS.gene67144:CDS | 50.0% | |
| ACATGGATGCTCTCAGATGC+AGG | + | chr1.3:4195650-4195669 | MS.gene67144:CDS | 50.0% | |
| ACGTCCCTTCTTGAAACAGC+AGG | - | chr1.3:4196238-4196257 | None:intergenic | 50.0% | |
| ACTCAAAGAACCCATCTGGC+CGG | - | chr1.3:4197799-4197818 | None:intergenic | 50.0% | |
| ACTGGTACATTTCCGAGTCC+TGG | + | chr1.3:4195171-4195190 | MS.gene67144:CDS | 50.0% | |
| AGGAAGCCAAAATCACCGCA+TGG | + | chr1.3:4197058-4197077 | MS.gene67144:CDS | 50.0% | |
| AGGAGACCTAAGTCGAAGAG+TGG | + | chr1.3:4195420-4195439 | MS.gene67144:CDS | 50.0% | |
| ATGCAAGGATCCGTTCGTGT+GGG | - | chr1.3:4195612-4195631 | None:intergenic | 50.0% | |
| CAGACTAGGAAATCGGGAAC+GGG | + | chr1.3:4195135-4195154 | MS.gene67144:CDS | 50.0% | |
| CATGCTCCTCTCCCAATATG+AGG | + | chr1.3:4196287-4196306 | MS.gene67144:CDS | 50.0% | |
| CATGGATGCTCTCAGATGCA+GGG | + | chr1.3:4195651-4195670 | MS.gene67144:CDS | 50.0% | |
| CCAAGATGAAGATCGAGTGC+TGG | - | chr1.3:4196503-4196522 | None:intergenic | 50.0% | |
| CCAGCACTCGATCTTCATCT+TGG | + | chr1.3:4196500-4196519 | MS.gene67144:CDS | 50.0% | |
| CGTCCCTTCTTGAAACAGCA+GGG | - | chr1.3:4196237-4196256 | None:intergenic | 50.0% | |
| CTAAATGGGAAGATGCGGAG+AGG | + | chr1.3:4195334-4195353 | MS.gene67144:CDS | 50.0% | |
| CTGCAAATCTGTGACAGGCA+GGG | - | chr1.3:4196341-4196360 | None:intergenic | 50.0% | |
| GAGTTCAGTTTCAGTCGACC+AGG | + | chr1.3:4197725-4197744 | MS.gene67144:CDS | 50.0% | |
| GCCGTCTAAATGGGAAGATG+CGG | + | chr1.3:4195329-4195348 | MS.gene67144:CDS | 50.0% | |
| GCTCGCTCAGTTAGTGTACA+TGG | + | chr1.3:4195633-4195652 | MS.gene67144:CDS | 50.0% | |
| GCTGTTAATGCCTCAGCTGA+TGG | + | chr1.3:4195546-4195565 | MS.gene67144:CDS | 50.0% | |
| GGAAGCCAAAATCACCGCAT+GGG | + | chr1.3:4197059-4197078 | MS.gene67144:CDS | 50.0% | |
| GGAGAACGTTGCCGTCTAAA+TGG | + | chr1.3:4195319-4195338 | MS.gene67144:CDS | 50.0% | |
| GGTTAAGAGCAGAGCGAGAA+GGG | - | chr1.3:4196706-4196725 | None:intergenic | 50.0% | |
| GTCCCTTCTTGAAACAGCAG+GGG | - | chr1.3:4196236-4196255 | None:intergenic | 50.0% | |
| GTTAAGAGCAGAGCGAGAAG+GGG | - | chr1.3:4196705-4196724 | None:intergenic | 50.0% | |
| TCTGAGCGAGTTGTAAGTGG+GGG | + | chr1.3:4195249-4195268 | MS.gene67144:CDS | 50.0% | |
| TCTGCAAATCTGTGACAGGC+AGG | - | chr1.3:4196342-4196361 | None:intergenic | 50.0% | |
| TGGTTAAGAGCAGAGCGAGA+AGG | - | chr1.3:4196707-4196726 | None:intergenic | 50.0% | |
| TTAAGAGCAGAGCGAGAAGG+GGG | - | chr1.3:4196704-4196723 | None:intergenic | 50.0% | |
| TTCGACTTAGGTCTCCTCAG+TGG | - | chr1.3:4195417-4195436 | None:intergenic | 50.0% | |
| TTCTGGCAACTTGATGAGCC+TGG | - | chr1.3:4197746-4197765 | None:intergenic | 50.0% | |
| TTTCAGTTCCACAGCCACTG+AGG | + | chr1.3:4195400-4195419 | MS.gene67144:CDS | 50.0% | |
| ! | AAGGGGGGAGTTGACTTCAA+CGG | - | chr1.3:4196688-4196707 | None:intergenic | 50.0% |
| !! | TGCTGTTTCAAGAAGGGACG+TGG | + | chr1.3:4196237-4196256 | MS.gene67144:CDS | 50.0% |
| AAGTCGAAGAGTGGTCCGCT+TGG | + | chr1.3:4195429-4195448 | MS.gene67144:CDS | 55.0% | |
| AATGGGAAGATGCGGAGAGG+TGG | + | chr1.3:4195337-4195356 | MS.gene67144:CDS | 55.0% | |
| AGCGGACCACTCTTCGACTT+AGG | - | chr1.3:4195429-4195448 | None:intergenic | 55.0% | |
| ATCGGGAACGGGTACAGTGA+CGG | + | chr1.3:4195146-4195165 | MS.gene67144:CDS | 55.0% | |
| CACACGAACGGATCCTTGCA+TGG | + | chr1.3:4195611-4195630 | MS.gene67144:CDS | 55.0% | |
| CATGCAAGGATCCGTTCGTG+TGG | - | chr1.3:4195613-4195632 | None:intergenic | 55.0% | |
| CTAACTGAGCGAGCCATGCA+AGG | - | chr1.3:4195627-4195646 | None:intergenic | 55.0% | |
| GGATATCAGGGATGTGCAGG+TGG | + | chr1.3:4196381-4196400 | MS.gene67144:CDS | 55.0% | |
| TAAGAGCAGAGCGAGAAGGG+GGG | - | chr1.3:4196703-4196722 | None:intergenic | 55.0% | |
| TTAGGTCTCCTCAGTGGCTG+TGG | - | chr1.3:4195411-4195430 | None:intergenic | 55.0% | |
| TTGTCCCAGGGCTAAAAGGG+AGG | + | chr1.3:4197038-4197057 | MS.gene67144:intron | 55.0% | |
| ! | AGGAGCATGAGCTACCCTCT+GGG | - | chr1.3:4196276-4196295 | None:intergenic | 55.0% |
| ! | AGGGGGGAGTTGACTTCAAC+GGG | - | chr1.3:4196687-4196706 | None:intergenic | 55.0% |
| ! | AGTTCTGGTGGCAATGGTGG+TGG | + | chr1.3:4195579-4195598 | MS.gene67144:CDS | 55.0% |
| ! | GCTTCCTCCCTTTTAGCCCT+GGG | - | chr1.3:4197045-4197064 | None:intergenic | 55.0% |
| ! | GGCCAGATGGGTTCTTTGAG+TGG | + | chr1.3:4197798-4197817 | MS.gene67144:CDS | 55.0% |
| !! | CAATCGTCGATTCCTTCCCG+AGG | + | chr1.3:4195675-4195694 | MS.gene67144:CDS | 55.0% |
| !! | GGCCGGAAGCAAGTTGGTAA+TGG | + | chr1.3:4195270-4195289 | MS.gene67144:CDS | 55.0% |
| AGCGAGTTGTAAGTGGGGGC+CGG | + | chr1.3:4195253-4195272 | MS.gene67144:CDS | 60.0% | |
| AGCTACCCTCTGGGCTCATC+TGG | - | chr1.3:4196267-4196286 | None:intergenic | 60.0% | |
| AGTCCTGTTTCGGGGGGTGA+TGG | + | chr1.3:4195366-4195385 | MS.gene67144:CDS | 60.0% | |
| ATTTCGGAGAGCCGGCCAGA+TGG | + | chr1.3:4197785-4197804 | MS.gene67144:CDS | 60.0% | |
| GCAACACCAGGTGGACCAAG+CGG | - | chr1.3:4195447-4195466 | None:intergenic | 60.0% | |
| GCAACCCAGATGAGCCCAGA+GGG | + | chr1.3:4196259-4196278 | MS.gene67144:CDS | 60.0% | |
| GCTACCCTCTGGGCTCATCT+GGG | - | chr1.3:4196266-4196285 | None:intergenic | 60.0% | |
| GTTCCATCACCCCCCGAAAC+AGG | - | chr1.3:4195372-4195391 | None:intergenic | 60.0% | |
| TCGGGAACGGGTACAGTGAC+GGG | + | chr1.3:4195147-4195166 | MS.gene67144:CDS | 60.0% | |
| TCTGTGACAGGCAGGGAAGG+TGG | - | chr1.3:4196334-4196353 | None:intergenic | 60.0% | |
| TGGAGGGCTTCCCACACGAA+CGG | + | chr1.3:4195599-4195618 | MS.gene67144:CDS | 60.0% | |
| TTTCGGAGAGCCGGCCAGAT+GGG | + | chr1.3:4197786-4197805 | MS.gene67144:CDS | 60.0% | |
| ! | GAGGAGCATGAGCTACCCTC+TGG | - | chr1.3:4196277-4196296 | None:intergenic | 60.0% |
| ! | GGCTTCCTCCCTTTTAGCCC+TGG | - | chr1.3:4197046-4197065 | None:intergenic | 60.0% |
| !! | CTGGTGGCAATGGTGGTGGA+GGG | + | chr1.3:4195583-4195602 | MS.gene67144:CDS | 60.0% |
| !! | GGGGGGTGATGGAACTGGAA+GGG | + | chr1.3:4195377-4195396 | MS.gene67144:CDS | 60.0% |
| !! | GTTTCGGGGGGTGATGGAAC+TGG | + | chr1.3:4195372-4195391 | MS.gene67144:CDS | 60.0% |
| !! | TCTGGTGGCAATGGTGGTGG+AGG | + | chr1.3:4195582-4195601 | MS.gene67144:CDS | 60.0% |
| AGTGGGGGCCGGAAGCAAGT+TGG | + | chr1.3:4195264-4195283 | MS.gene67144:CDS | 65.0% | |
| AGTGGTCCGCTTGGTCCACC+TGG | + | chr1.3:4195438-4195457 | MS.gene67144:CDS | 65.0% | |
| CGGGAACGGGTACAGTGACG+GGG | + | chr1.3:4195148-4195167 | MS.gene67144:CDS | 65.0% | |
| GACAGGCAGGGAAGGTGGAG+TGG | - | chr1.3:4196329-4196348 | None:intergenic | 65.0% | |
| GGCAACCCAGATGAGCCCAG+AGG | + | chr1.3:4196258-4196277 | MS.gene67144:CDS | 65.0% | |
| ! | ACGGGTACAGTGACGGGGAC+TGG | + | chr1.3:4195153-4195172 | MS.gene67144:CDS | 65.0% |
| !! | CGGGGGGTGATGGAACTGGA+AGG | + | chr1.3:4195376-4195395 | MS.gene67144:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 4195117 | 4197845 | 4195117 | ID=MS.gene67144 |
| chr1.3 | mRNA | 4195117 | 4197845 | 4195117 | ID=MS.gene67144.t1;Parent=MS.gene67144 |
| chr1.3 | exon | 4195117 | 4195696 | 4195117 | ID=MS.gene67144.t1.exon1;Parent=MS.gene67144.t1 |
| chr1.3 | CDS | 4195117 | 4195696 | 4195117 | ID=cds.MS.gene67144.t1;Parent=MS.gene67144.t1 |
| chr1.3 | exon | 4196191 | 4196554 | 4196191 | ID=MS.gene67144.t1.exon2;Parent=MS.gene67144.t1 |
| chr1.3 | CDS | 4196191 | 4196554 | 4196191 | ID=cds.MS.gene67144.t1;Parent=MS.gene67144.t1 |
| chr1.3 | exon | 4197047 | 4197128 | 4197047 | ID=MS.gene67144.t1.exon3;Parent=MS.gene67144.t1 |
| chr1.3 | CDS | 4197047 | 4197128 | 4197047 | ID=cds.MS.gene67144.t1;Parent=MS.gene67144.t1 |
| chr1.3 | exon | 4197639 | 4197845 | 4197639 | ID=MS.gene67144.t1.exon4;Parent=MS.gene67144.t1 |
| chr1.3 | CDS | 4197639 | 4197845 | 4197639 | ID=cds.MS.gene67144.t1;Parent=MS.gene67144.t1 |
| Gene Sequence |
| Protein sequence |
