Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67476.t1 | XP_003612215.2 | 94 | 838 | 5 | 1 | 1 | 838 | 1 | 793 | 0.00E+00 | 1523.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67476.t1 | Q7X659 | 71.2 | 838 | 189 | 3 | 1 | 838 | 1 | 786 | 0.0e+00 | 1176.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67476.t1 | G7JXK2 | 94.0 | 838 | 5 | 1 | 1 | 838 | 1 | 793 | 0.0e+00 | 1523.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052609 | MS.gene67476 | 0.814183 | 1.75E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27090 | MS.gene67476 | PPI |
| MS.gene64041 | MS.gene67476 | PPI |
| MS.gene67476 | MS.gene24125 | PPI |
| MS.gene64038 | MS.gene67476 | PPI |
| MS.gene64039 | MS.gene67476 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67476.t1 | MTR_5g022610 | 94.033 | 838 | 5 | 1 | 1 | 838 | 1 | 793 | 0.0 | 1610 |
| MS.gene67476.t1 | MTR_5g022610 | 92.826 | 697 | 5 | 1 | 1 | 697 | 1 | 652 | 0.0 | 1312 |
| MS.gene67476.t1 | MTR_1g025610 | 73.182 | 839 | 175 | 3 | 1 | 838 | 1 | 790 | 0.0 | 1257 |
| MS.gene67476.t1 | MTR_1g025610 | 77.534 | 730 | 159 | 2 | 110 | 838 | 1 | 726 | 0.0 | 1176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67476.t1 | AT2G17790 | 72.315 | 838 | 180 | 3 | 1 | 838 | 1 | 786 | 0.0 | 1233 |
| MS.gene67476.t1 | AT1G75850 | 71.531 | 836 | 188 | 3 | 3 | 838 | 4 | 789 | 0.0 | 1225 |
| MS.gene67476.t1 | AT3G51310 | 68.653 | 839 | 207 | 5 | 6 | 841 | 3 | 788 | 0.0 | 1154 |
| MS.gene67476.t1 | AT1G75850 | 73.440 | 561 | 144 | 2 | 278 | 838 | 1 | 556 | 0.0 | 845 |
Find 183 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAATTGCATTGCTTAATT+TGG | 0.084194 | 5.1:+13616419 | None:intergenic |
| CCTTTGAATTTCAATCTATT+TGG | 0.152013 | 5.1:-13620617 | MS.gene67476:CDS |
| TATGCCTTAAGCGGGCTTTA+AGG | 0.189667 | 5.1:-13609965 | MS.gene67476:CDS |
| TTGAAAGCCTTTCCATTAAC+TGG | 0.202513 | 5.1:+13616499 | None:intergenic |
| TGTTCATTTCTGTGAAATTT+TGG | 0.207828 | 5.1:+13618553 | None:intergenic |
| CTGGTCTGCAGGGGCCTTCC+CGG | 0.210811 | 5.1:-13617797 | MS.gene67476:intron |
| GACAGTACTATCCCAGTTAA+TGG | 0.262602 | 5.1:-13616511 | MS.gene67476:CDS |
| CATTCATAATTAACTCAATT+AGG | 0.271218 | 5.1:+13609714 | None:intergenic |
| ATGCGTGCTCACATTTGTTT+TGG | 0.279351 | 5.1:-13610695 | MS.gene67476:CDS |
| AGCATTGTTTGAACTGATAA+AGG | 0.285330 | 5.1:-13612852 | MS.gene67476:CDS |
| TGCAATCCATCAAGTAGAAT+TGG | 0.299727 | 5.1:+13617398 | None:intergenic |
| TGATCCAGAAGAGATGTTTA+AGG | 0.306305 | 5.1:-13612539 | MS.gene67476:intron |
| AGTCAAGAAGAAAATCCTTT+TGG | 0.307658 | 5.1:-13611637 | MS.gene67476:CDS |
| CCTTGACGTTCCAACTAATA+AGG | 0.309908 | 5.1:-13613025 | MS.gene67476:CDS |
| GTTGGCCCAATTCTACTTGA+TGG | 0.310066 | 5.1:-13617404 | MS.gene67476:CDS |
| CACAGAAATGAACAAACTTT+GGG | 0.324886 | 5.1:-13618544 | MS.gene67476:CDS |
| ACAGCTATCCATTTGATAAT+AGG | 0.329025 | 5.1:-13610925 | MS.gene67476:CDS |
| GATCATCATTATAAAACATT+TGG | 0.340860 | 5.1:+13612557 | None:intergenic |
| TCACAGAAATGAACAAACTT+TGG | 0.345532 | 5.1:-13618545 | MS.gene67476:CDS |
| AAGGATAAATTGCCGGATAT+TGG | 0.347189 | 5.1:-13619055 | MS.gene67476:CDS |
| GGGCGCTTACCCTCAACTTC+AGG | 0.349713 | 5.1:-13617323 | MS.gene67476:intron |
| AAGCCCGCTTAAGGCATAAT+AGG | 0.353896 | 5.1:+13609970 | None:intergenic |
| CTCACCTTAAACATCTCTTC+TGG | 0.378777 | 5.1:+13612535 | None:intergenic |
| TCCTGCTAAGGATGTTCTTA+AGG | 0.387412 | 5.1:-13619155 | MS.gene67476:CDS |
| ATCCTTAGCAGGAGCTTCCT+TGG | 0.388111 | 5.1:+13619165 | None:intergenic |
| CAAACTCTTGATGTGCTGTT+GGG | 0.388585 | 5.1:-13617343 | MS.gene67476:CDS |
| ATGTCTTCGGTGTTGAGAAC+AGG | 0.390066 | 5.1:-13610885 | MS.gene67476:CDS |
| TTCCTCGCCGCCGGCATCGC+CGG | 0.392272 | 5.1:-13620759 | MS.gene67476:CDS |
| AGTTACAGTTGCCGCTATCC+AGG | 0.398125 | 5.1:-13609738 | MS.gene67476:CDS |
| AAGCTCGTAAAGATCAATAA+TGG | 0.401737 | 5.1:+13620285 | None:intergenic |
| GCATTGTTTGAACTGATAAA+GGG | 0.403489 | 5.1:-13612851 | MS.gene67476:CDS |
| AAAGCATCTGCCGATGGATC+TGG | 0.409395 | 5.1:+13609668 | None:intergenic |
| TCCAAATTAAGCAATGCAAT+TGG | 0.414365 | 5.1:-13616420 | MS.gene67476:CDS |
| GTTTGCAAATGGTACTCATC+AGG | 0.414564 | 5.1:+13617361 | None:intergenic |
| CAGCCTGACATGCCCACTGC+TGG | 0.415024 | 5.1:-13613553 | MS.gene67476:CDS |
| TTTACTGTCTTCAGTTGGTC+AGG | 0.418195 | 5.1:-13611681 | MS.gene67476:intron |
| AAGAAGAGAGAATACGGTTA+GGG | 0.419621 | 5.1:+13620682 | None:intergenic |
| GAGGAACTTCTCTTCATCTT+CGG | 0.420874 | 5.1:+13620776 | None:intergenic |
| TCCACATGTCAAACCTTGAT+TGG | 0.421015 | 5.1:+13609575 | None:intergenic |
| CAATCCTTAAAGCCCGCTTA+AGG | 0.421497 | 5.1:+13609961 | None:intergenic |
| CTGTTGAAGTCCGGCGATGC+CGG | 0.421693 | 5.1:+13620749 | None:intergenic |
| TTTCTCGTTTCTCCTTCTCC+CGG | 0.421907 | 5.1:+13617778 | None:intergenic |
| GCAAACTCTTGATGTGCTGT+TGG | 0.425162 | 5.1:-13617344 | MS.gene67476:CDS |
| TGGTCTGCAGGGGCCTTCCC+GGG | 0.427856 | 5.1:-13617796 | MS.gene67476:intron |
| TTGGGTGCGGATGCAGCATC+AGG | 0.431226 | 5.1:-13618526 | MS.gene67476:intron |
| ACTCCAGCAGTGGGCATGTC+AGG | 0.434101 | 5.1:+13613550 | None:intergenic |
| CGTTTCTCCTTCTCCCGGGA+AGG | 0.438675 | 5.1:+13617783 | None:intergenic |
| CGAGACTCTGTCAGGTGTCC+TGG | 0.442445 | 5.1:-13611286 | MS.gene67476:CDS |
| TGCAAATGCTGCACAACAAA+TGG | 0.444033 | 5.1:-13609940 | MS.gene67476:CDS |
| CAATCGTGGCAAAATGTTGC+CGG | 0.446511 | 5.1:+13620252 | None:intergenic |
| GTTGCCATGACCTTATTAGT+TGG | 0.450360 | 5.1:+13613015 | None:intergenic |
| GAATTTCGGTACTTGCTACT+TGG | 0.450579 | 5.1:-13609178 | MS.gene67476:CDS |
| AGAATACGGTTAGGGTTTAA+CGG | 0.452066 | 5.1:+13620690 | None:intergenic |
| AGTTAGCAAGGATAAATTGC+CGG | 0.453840 | 5.1:-13619062 | MS.gene67476:CDS |
| GAAGAAGAGAGAATACGGTT+AGG | 0.455079 | 5.1:+13620681 | None:intergenic |
| TTCAAACTACCCTCGTGTAA+TGG | 0.463333 | 5.1:-13613052 | MS.gene67476:CDS |
| ACAGTGAAAGGCAGACGCTT+TGG | 0.463935 | 5.1:+13612311 | None:intergenic |
| GAAGAGTTCCTATTATCAAA+TGG | 0.465787 | 5.1:+13610917 | None:intergenic |
| GCAAAATGTTGCCGGCGTGC+TGG | 0.465969 | 5.1:+13620260 | None:intergenic |
| TCATGTTCTCAGTCAGATAG+AGG | 0.467619 | 5.1:-13617606 | MS.gene67476:CDS |
| TCAGCATAATCTAGTCGATC+GGG | 0.469613 | 5.1:+13613481 | None:intergenic |
| TGAGAAATATGAACCAATCA+AGG | 0.471525 | 5.1:-13609588 | MS.gene67476:intron |
| GTTCGAATCCTGCAACGAAT+CGG | 0.472854 | 5.1:+13620578 | None:intergenic |
| TATCTTTACTTCTTTGAGAA+GGG | 0.481938 | 5.1:-13609770 | MS.gene67476:CDS |
| CTTCAAAGGATGCATGTCTT+CGG | 0.482111 | 5.1:-13610898 | MS.gene67476:CDS |
| ACGAATCGGAAAATGAAAAT+CGG | 0.486069 | 5.1:+13620592 | None:intergenic |
| GCAATCCATCAAGTAGAATT+GGG | 0.487567 | 5.1:+13617399 | None:intergenic |
| TACACAGCTCTGCATTGATC+TGG | 0.488790 | 5.1:+13610717 | None:intergenic |
| GCAGGGGCCTTCCCGGGAGA+AGG | 0.490072 | 5.1:-13617790 | MS.gene67476:intron |
| CAGACCATCGAGACTCTGTC+AGG | 0.494213 | 5.1:-13611294 | MS.gene67476:CDS |
| TTTACCTGCTCAAGTACTCT+AGG | 0.496535 | 5.1:+13617548 | None:intergenic |
| ACTGATAAAGGGGCTTATCA+AGG | 0.497046 | 5.1:-13612840 | MS.gene67476:CDS |
| AATGAAGAGCATTACTGATC+CGG | 0.499744 | 5.1:+13609896 | None:intergenic |
| CTGAGAAAGAGTCCACGAAC+AGG | 0.501578 | 5.1:+13619100 | None:intergenic |
| GGCATTCAGAATCCTGTTCG+TGG | 0.501736 | 5.1:-13619112 | MS.gene67476:CDS |
| GATAGCTGTGACCTGTGCTC+TGG | 0.502526 | 5.1:+13610939 | None:intergenic |
| ATTCTACATGCACCGTGCAT+TGG | 0.505624 | 5.1:-13620721 | MS.gene67476:CDS |
| TTTAAAGAAGAAAACATAAG+AGG | 0.507523 | 5.1:+13612284 | None:intergenic |
| TGCGCGCATTTGATCAATTG+AGG | 0.507817 | 5.1:-13620351 | MS.gene67476:CDS |
| GTATCTTTACTTCTTTGAGA+AGG | 0.508035 | 5.1:-13609771 | MS.gene67476:CDS |
| TAGCGGCAACTGTAACTTGT+GGG | 0.509400 | 5.1:+13609744 | None:intergenic |
| TAATTAACTCAATTAGGCCC+TGG | 0.511873 | 5.1:+13609720 | None:intergenic |
| ACTGAAATGACCTCTTCATC+AGG | 0.513627 | 5.1:+13612803 | None:intergenic |
| TCCTTAAGAACATCCTTAGC+AGG | 0.514144 | 5.1:+13619154 | None:intergenic |
| GAATTGAAGAAGAGAGAATA+CGG | 0.514689 | 5.1:+13620676 | None:intergenic |
| ATTTGATCAATTGAGGAAGC+TGG | 0.517144 | 5.1:-13620344 | MS.gene67476:CDS |
| TTCTCGTTTCTCCTTCTCCC+GGG | 0.525927 | 5.1:+13617779 | None:intergenic |
| ACTTTAACTCACAAGGCCAC+AGG | 0.526213 | 5.1:-13610859 | MS.gene67476:CDS |
| GAATGAATTCTGTTGAAGTC+CGG | 0.528606 | 5.1:+13620740 | None:intergenic |
| GGAGAAGGAGAAACGAGAAA+AGG | 0.529242 | 5.1:-13617775 | MS.gene67476:CDS |
| CCAAATAGATTGAAATTCAA+AGG | 0.529749 | 5.1:+13620617 | None:intergenic |
| TGAAAGCCTTTCCATTAACT+GGG | 0.530830 | 5.1:+13616500 | None:intergenic |
| AGATTATGCTGATCAAGTCT+TGG | 0.535438 | 5.1:-13613470 | MS.gene67476:intron |
| GAAGAGAAGTTCCTCGCCGC+CGG | 0.535875 | 5.1:-13620768 | MS.gene67476:CDS |
| ATGTCATTATATTTCTCTAG+TGG | 0.538353 | 5.1:+13613093 | None:intergenic |
| CTCAATTAGGCCCTGGATAG+CGG | 0.539218 | 5.1:+13609727 | None:intergenic |
| GATCATGATAACATGAAAGA+TGG | 0.539688 | 5.1:-13610666 | MS.gene67476:CDS |
| TCGTACTCAGAACCAATATC+CGG | 0.540147 | 5.1:+13619043 | None:intergenic |
| GTGAGGAAGCACATACTGAC+TGG | 0.541983 | 5.1:-13612338 | MS.gene67476:CDS |
| GCACATCAAGAGTTTGCAAA+TGG | 0.543783 | 5.1:+13617350 | None:intergenic |
| AGGGTAGTTTGAAAGCTTCA+AGG | 0.545666 | 5.1:+13613062 | None:intergenic |
| AAACAAAAGGGTGGTACAGT+TGG | 0.548365 | 5.1:-13609611 | MS.gene67476:CDS |
| GTCCGGCGATGCCGGCGGCG+AGG | 0.550071 | 5.1:+13620757 | None:intergenic |
| ATCCAAGGAAGCTCCTGCTA+AGG | 0.552083 | 5.1:-13619167 | MS.gene67476:CDS |
| TTATCTTTCTCAAGTTAGCA+AGG | 0.552721 | 5.1:-13619074 | MS.gene67476:CDS |
| GTTGATGCATCATCTCCAAA+AGG | 0.553449 | 5.1:+13611622 | None:intergenic |
| AGGTATCTCCTCTGTACAGT+AGG | 0.554384 | 5.1:-13619205 | MS.gene67476:CDS |
| GTTCCCTAACCTGAAGTTGA+GGG | 0.556360 | 5.1:+13617314 | None:intergenic |
| CACTGCAACTCCAGATCCAT+CGG | 0.556884 | 5.1:-13609678 | MS.gene67476:CDS |
| ATAAGAGGTGGAACAGTGAA+AGG | 0.559617 | 5.1:+13612299 | None:intergenic |
| CGTGAATTGCAAAGATGAGT+TGG | 0.561375 | 5.1:-13617422 | MS.gene67476:CDS |
| GTATTTGTGAGGAGAAAGCT+TGG | 0.561898 | 5.1:+13620500 | None:intergenic |
| CACAACTGCAATGCTAACTC+TGG | 0.562797 | 5.1:+13611261 | None:intergenic |
| TGATAATAGGAACTCTTCAA+AGG | 0.563619 | 5.1:-13610912 | MS.gene67476:CDS |
| AATGCAGCACGAGGTAGCAC+CGG | 0.565115 | 5.1:-13609915 | MS.gene67476:CDS |
| GAAGCTGGAGATGTTCTTCG+AGG | 0.574256 | 5.1:-13620329 | MS.gene67476:CDS |
| AGGTAAAATTGAGGACAAGA+AGG | 0.574526 | 5.1:-13613148 | MS.gene67476:CDS |
| GGCTTATCAAGGATTCTGAC+GGG | 0.575698 | 5.1:-13612829 | MS.gene67476:CDS |
| AGTCCTATTATGCCTTAAGC+GGG | 0.575988 | 5.1:-13609973 | MS.gene67476:CDS |
| GTTACAGTTGCCGCTATCCA+GGG | 0.576681 | 5.1:-13609737 | MS.gene67476:CDS |
| CCTTATTAGTTGGAACGTCA+AGG | 0.577662 | 5.1:+13613025 | None:intergenic |
| CTCTGGCAAAGGTAAAATTG+AGG | 0.578328 | 5.1:-13613157 | MS.gene67476:CDS |
| ATCAGCATAATCTAGTCGAT+CGG | 0.578728 | 5.1:+13613480 | None:intergenic |
| GGCTGCAAATGACTGTGAGT+TGG | 0.580108 | 5.1:-13611142 | MS.gene67476:CDS |
| GCAATGCTAACTCTGGTGCC+AGG | 0.580206 | 5.1:+13611268 | None:intergenic |
| TTGAAGTCCGGCGATGCCGG+CGG | 0.582299 | 5.1:+13620752 | None:intergenic |
| TGTCTTCGGTGTTGAGAACA+GGG | 0.583710 | 5.1:-13610884 | MS.gene67476:CDS |
| TTTGCAAATGGTACTCATCA+GGG | 0.584013 | 5.1:+13617362 | None:intergenic |
| CAACATCTTTGTACATCTCA+AGG | 0.584038 | 5.1:+13617576 | None:intergenic |
| CTTTAACTCACAAGGCCACA+GGG | 0.584542 | 5.1:-13610858 | MS.gene67476:CDS |
| ATCTGTATACATCAAATCCA+AGG | 0.585823 | 5.1:-13619182 | MS.gene67476:CDS |
| TAAAGTTACAACTCCAGCAG+TGG | 0.587524 | 5.1:+13613540 | None:intergenic |
| AAAGAAGAAAACATAAGAGG+TGG | 0.590024 | 5.1:+13612287 | None:intergenic |
| CATTGTTTGAACTGATAAAG+GGG | 0.590196 | 5.1:-13612850 | MS.gene67476:CDS |
| TACGAGCTTGTCCAGCACGC+CGG | 0.590451 | 5.1:-13620271 | MS.gene67476:CDS |
| TTATGCTGCTTCAAGTGCAG+AGG | 0.591369 | 5.1:-13616475 | MS.gene67476:CDS |
| GGATATTGGTTCTGAGTACG+AGG | 0.594039 | 5.1:-13619041 | MS.gene67476:CDS |
| CGTTCCAACTAATAAGGTCA+TGG | 0.594538 | 5.1:-13613019 | MS.gene67476:CDS |
| GCTTCCTAGAGTACTTGAGC+AGG | 0.596217 | 5.1:-13617552 | MS.gene67476:intron |
| CAGGGATACTTTAACTCACA+AGG | 0.597480 | 5.1:-13610866 | MS.gene67476:CDS |
| TACTATCCCAGTTAATGGAA+AGG | 0.598378 | 5.1:-13616506 | MS.gene67476:CDS |
| AATTGTTATACAGGTCATAG+AGG | 0.598940 | 5.1:-13613578 | MS.gene67476:intron |
| GAGTCCTATTATGCCTTAAG+CGG | 0.599450 | 5.1:-13609974 | MS.gene67476:CDS |
| GGGCTTATCAAGGATTCTGA+CGG | 0.602860 | 5.1:-13612830 | MS.gene67476:CDS |
| GACACCTGACAGAGTCTCGA+TGG | 0.603687 | 5.1:+13611290 | None:intergenic |
| TGACGGGACTCCTGATGAAG+AGG | 0.605204 | 5.1:-13612813 | MS.gene67476:intron |
| AAATGAACAAACTTTGGGTG+CGG | 0.606382 | 5.1:-13618539 | MS.gene67476:CDS |
| AGTTCCCTAACCTGAAGTTG+AGG | 0.609828 | 5.1:+13617313 | None:intergenic |
| ATACCAGGATTCCAGAGCAC+AGG | 0.612388 | 5.1:-13610950 | MS.gene67476:intron |
| CAGTTGGTCAGGCAGTTGCA+AGG | 0.614360 | 5.1:-13611670 | MS.gene67476:CDS |
| CAGAGTTCGTAGTATTTGTG+AGG | 0.614445 | 5.1:+13620489 | None:intergenic |
| ATTAAGCAATGCAATTGGCA+AGG | 0.614576 | 5.1:-13616415 | MS.gene67476:intron |
| CGATAATCGTGAATCGCGAG+TGG | 0.619576 | 5.1:+13620654 | None:intergenic |
| CTGTATATAGCGCATAGTAG+TGG | 0.620971 | 5.1:+13609640 | None:intergenic |
| CATGTTCTCAGTCAGATAGA+GGG | 0.621850 | 5.1:-13617605 | MS.gene67476:CDS |
| GCTAAGAAAGCATCTGCCGA+TGG | 0.622652 | 5.1:+13609662 | None:intergenic |
| ACGGAGGAGTTACCAATGCA+CGG | 0.624713 | 5.1:+13620709 | None:intergenic |
| AGGAGAAACGAGAAAAGGAG+AGG | 0.627935 | 5.1:-13617770 | MS.gene67476:CDS |
| AAAGTTACAACTCCAGCAGT+GGG | 0.628281 | 5.1:+13613541 | None:intergenic |
| GGATGAAGATGATTTCAAAG+AGG | 0.628375 | 5.1:-13612605 | MS.gene67476:CDS |
| GTTGTGCTTGCAATGTGCTG+AGG | 0.641551 | 5.1:-13611244 | MS.gene67476:intron |
| GGGGTGGACATGAAGAGTGA+AGG | 0.643078 | 5.1:+13613501 | None:intergenic |
| ATAACATGAAAGATGGAGAG+AGG | 0.651839 | 5.1:-13610659 | MS.gene67476:intron |
| TTCGAGGAAGAGACTCGTCG+TGG | 0.654957 | 5.1:-13620313 | MS.gene67476:CDS |
| AATAACACATACCTTGTCAG+AGG | 0.659815 | 5.1:+13612948 | None:intergenic |
| ATAGCGGCAACTGTAACTTG+TGG | 0.663179 | 5.1:+13609743 | None:intergenic |
| CCGGAGAAAATGATGCTCGA+CGG | 0.665622 | 5.1:-13620801 | None:intergenic |
| TGCAGATCATTGAAACAGTG+AGG | 0.667568 | 5.1:-13612355 | MS.gene67476:intron |
| TCTAGCACCACTTACAATCG+TGG | 0.683547 | 5.1:+13620238 | None:intergenic |
| ACGCATTTCTACCTCTGACA+AGG | 0.688272 | 5.1:-13612959 | MS.gene67476:intron |
| GATATTGGTTCTGAGTACGA+GGG | 0.691815 | 5.1:-13619040 | MS.gene67476:CDS |
| CATAATCTAGTCGATCGGGG+TGG | 0.695269 | 5.1:+13613485 | None:intergenic |
| CAAATGGCAAATGCAGCACG+AGG | 0.695757 | 5.1:-13609924 | MS.gene67476:CDS |
| CAGCATAATCTAGTCGATCG+GGG | 0.697857 | 5.1:+13613482 | None:intergenic |
| ATATTGGTTCTGAGTACGAG+GGG | 0.701758 | 5.1:-13619039 | MS.gene67476:intron |
| TCAAGGAATTCCATTACACG+AGG | 0.703879 | 5.1:+13613042 | None:intergenic |
| AGGAAGCACATACTGACTGG+AGG | 0.706279 | 5.1:-13612335 | MS.gene67476:CDS |
| GATCTTGTAGAGATGTGTCG+TGG | 0.708072 | 5.1:-13619133 | MS.gene67476:CDS |
| GAATTCAATAATCACCCCTG+TGG | 0.722096 | 5.1:+13610843 | None:intergenic |
| TTTAACTCACAAGGCCACAG+GGG | 0.727627 | 5.1:-13610857 | MS.gene67476:intron |
| ATACAGATCCTACTGTACAG+AGG | 0.740473 | 5.1:+13619197 | None:intergenic |
| CAAGGAATTCCATTACACGA+GGG | 0.748600 | 5.1:+13613043 | None:intergenic |
| ATACGGTTAGGGTTTAACGG+AGG | 0.775384 | 5.1:+13620693 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 13609164 | 13620814 | 13609164 | ID=MS.gene67476 |
| chr5.1 | mRNA | 13609164 | 13620814 | 13609164 | ID=MS.gene67476.t1;Parent=MS.gene67476 |
| chr5.1 | exon | 13620490 | 13620814 | 13620490 | ID=MS.gene67476.t1.exon1;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13620490 | 13620814 | 13620490 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13620253 | 13620376 | 13620253 | ID=MS.gene67476.t1.exon2;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13620253 | 13620376 | 13620253 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13619040 | 13619225 | 13619040 | ID=MS.gene67476.t1.exon3;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13619040 | 13619225 | 13619040 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13618527 | 13618614 | 13618527 | ID=MS.gene67476.t1.exon4;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13618527 | 13618614 | 13618527 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13617752 | 13617808 | 13617752 | ID=MS.gene67476.t1.exon5;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13617752 | 13617808 | 13617752 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13617553 | 13617642 | 13617553 | ID=MS.gene67476.t1.exon6;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13617553 | 13617642 | 13617553 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13617324 | 13617446 | 13617324 | ID=MS.gene67476.t1.exon7;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13617324 | 13617446 | 13617324 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13616416 | 13616550 | 13616416 | ID=MS.gene67476.t1.exon8;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13616416 | 13616550 | 13616416 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13613471 | 13613587 | 13613471 | ID=MS.gene67476.t1.exon9;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13613471 | 13613587 | 13613471 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13612960 | 13613199 | 13612960 | ID=MS.gene67476.t1.exon10;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13612960 | 13613199 | 13612960 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13612814 | 13612879 | 13612814 | ID=MS.gene67476.t1.exon11;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13612814 | 13612879 | 13612814 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13612540 | 13612629 | 13612540 | ID=MS.gene67476.t1.exon12;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13612540 | 13612629 | 13612540 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13612283 | 13612372 | 13612283 | ID=MS.gene67476.t1.exon13;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13612283 | 13612372 | 13612283 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13611588 | 13611689 | 13611588 | ID=MS.gene67476.t1.exon14;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13611588 | 13611689 | 13611588 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13611245 | 13611313 | 13611245 | ID=MS.gene67476.t1.exon15;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13611245 | 13611313 | 13611245 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13611083 | 13611163 | 13611083 | ID=MS.gene67476.t1.exon16;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13611083 | 13611163 | 13611083 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13610858 | 13610965 | 13610858 | ID=MS.gene67476.t1.exon17;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13610858 | 13610965 | 13610858 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13610660 | 13610763 | 13610660 | ID=MS.gene67476.t1.exon18;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13610660 | 13610763 | 13610660 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13609882 | 13609995 | 13609882 | ID=MS.gene67476.t1.exon19;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13609882 | 13609995 | 13609882 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13609589 | 13609793 | 13609589 | ID=MS.gene67476.t1.exon20;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13609589 | 13609793 | 13609589 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| chr5.1 | exon | 13609164 | 13609202 | 13609164 | ID=MS.gene67476.t1.exon21;Parent=MS.gene67476.t1 |
| chr5.1 | CDS | 13609164 | 13609202 | 13609164 | ID=cds.MS.gene67476.t1;Parent=MS.gene67476.t1 |
| Gene Sequence |
| Protein sequence |
