Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67692.t1 | XP_003612246.1 | 99.6 | 234 | 1 | 0 | 1 | 234 | 1 | 234 | 5.00E-100 | 374 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67692.t1 | Q8GT75 | 82.1 | 151 | 26 | 1 | 85 | 234 | 86 | 236 | 1.4e-66 | 254.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67692.t1 | G7JYQ7 | 99.6 | 234 | 1 | 0 | 1 | 234 | 1 | 234 | 3.6e-100 | 374.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050081 | MS.gene67692 | 0.801654 | 8.13E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67692.t1 | MTR_5g022920 | 99.573 | 234 | 1 | 0 | 1 | 234 | 1 | 234 | 6.27e-171 | 470 |
MS.gene67692.t1 | MTR_8g074900 | 70.513 | 234 | 59 | 2 | 1 | 234 | 2 | 225 | 2.17e-113 | 324 |
MS.gene67692.t1 | MTR_4g108830 | 42.640 | 197 | 106 | 3 | 42 | 234 | 26 | 219 | 2.55e-47 | 156 |
MS.gene67692.t1 | MTR_4g108830 | 39.175 | 194 | 89 | 5 | 42 | 234 | 26 | 191 | 2.03e-37 | 129 |
MS.gene67692.t1 | MTR_5g092750 | 36.818 | 220 | 116 | 5 | 13 | 231 | 30 | 227 | 1.49e-31 | 115 |
MS.gene67692.t1 | MTR_5g092790 | 36.842 | 190 | 110 | 2 | 43 | 231 | 47 | 227 | 6.35e-30 | 111 |
MS.gene67692.t1 | MTR_5g082940 | 41.975 | 81 | 47 | 0 | 154 | 234 | 68 | 148 | 8.45e-18 | 78.2 |
MS.gene67692.t1 | MTR_1g492830 | 44.595 | 74 | 40 | 1 | 158 | 231 | 58 | 130 | 5.19e-17 | 77.4 |
MS.gene67692.t1 | MTR_3g094000 | 45.455 | 77 | 42 | 0 | 158 | 234 | 88 | 164 | 6.52e-17 | 75.9 |
MS.gene67692.t1 | MTR_4g120270 | 45.205 | 73 | 36 | 1 | 159 | 231 | 78 | 146 | 1.84e-16 | 76.6 |
MS.gene67692.t1 | MTR_8g071815 | 61.702 | 47 | 18 | 0 | 187 | 233 | 88 | 134 | 2.66e-16 | 74.3 |
MS.gene67692.t1 | MTR_7g079280 | 38.028 | 71 | 44 | 0 | 161 | 231 | 80 | 150 | 1.49e-15 | 72.4 |
MS.gene67692.t1 | MTR_5g026730 | 50.000 | 58 | 29 | 0 | 174 | 231 | 79 | 136 | 3.41e-15 | 71.2 |
MS.gene67692.t1 | MTR_4g063070 | 33.945 | 109 | 64 | 2 | 131 | 231 | 270 | 378 | 5.27e-15 | 73.6 |
MS.gene67692.t1 | MTR_7g117540 | 53.571 | 56 | 26 | 0 | 179 | 234 | 91 | 146 | 5.50e-15 | 72.8 |
MS.gene67692.t1 | MTR_7g116220 | 41.892 | 74 | 42 | 1 | 159 | 231 | 68 | 141 | 8.83e-15 | 70.5 |
MS.gene67692.t1 | MTR_2g436100 | 39.286 | 84 | 49 | 1 | 148 | 231 | 80 | 161 | 1.08e-14 | 72.0 |
MS.gene67692.t1 | MTR_5g030010 | 62.222 | 45 | 17 | 0 | 187 | 231 | 146 | 190 | 1.26e-14 | 72.4 |
MS.gene67692.t1 | MTR_8g066780 | 64.444 | 45 | 16 | 0 | 187 | 231 | 140 | 184 | 1.47e-14 | 72.0 |
MS.gene67692.t1 | MTR_2g041200 | 48.333 | 60 | 31 | 0 | 172 | 231 | 92 | 151 | 1.49e-14 | 69.7 |
MS.gene67692.t1 | MTR_5g064980 | 28.030 | 132 | 86 | 2 | 104 | 234 | 59 | 182 | 1.89e-14 | 72.0 |
MS.gene67692.t1 | MTR_8g099515 | 41.667 | 72 | 42 | 0 | 161 | 232 | 309 | 380 | 1.89e-14 | 72.0 |
MS.gene67692.t1 | MTR_3g067985 | 30.282 | 142 | 84 | 4 | 92 | 231 | 32 | 160 | 2.11e-14 | 69.3 |
MS.gene67692.t1 | MTR_5g024730 | 40.260 | 77 | 46 | 0 | 158 | 234 | 74 | 150 | 2.77e-14 | 69.7 |
MS.gene67692.t1 | MTR_1g014710 | 32.692 | 104 | 64 | 2 | 136 | 234 | 175 | 277 | 2.99e-14 | 70.9 |
MS.gene67692.t1 | MTR_6g007680 | 39.189 | 74 | 43 | 1 | 158 | 231 | 37 | 108 | 4.16e-14 | 67.8 |
MS.gene67692.t1 | MTR_3g091200 | 32.759 | 116 | 73 | 1 | 116 | 231 | 263 | 373 | 6.93e-14 | 70.5 |
MS.gene67692.t1 | MTR_1g100737 | 50.000 | 54 | 27 | 0 | 181 | 234 | 115 | 168 | 8.19e-14 | 68.2 |
MS.gene67692.t1 | MTR_8g089880 | 46.479 | 71 | 36 | 1 | 161 | 231 | 127 | 195 | 9.40e-14 | 69.3 |
MS.gene67692.t1 | MTR_6g087150 | 39.437 | 71 | 41 | 1 | 161 | 231 | 93 | 161 | 9.94e-14 | 70.1 |
MS.gene67692.t1 | MTR_7g076250 | 33.696 | 92 | 59 | 2 | 140 | 231 | 43 | 132 | 1.02e-13 | 67.8 |
MS.gene67692.t1 | MTR_2g055790 | 34.066 | 91 | 53 | 2 | 145 | 234 | 61 | 145 | 1.13e-13 | 67.8 |
MS.gene67692.t1 | MTR_2g009310 | 57.447 | 47 | 20 | 0 | 185 | 231 | 157 | 203 | 1.16e-13 | 69.7 |
MS.gene67692.t1 | MTR_5g064990 | 37.662 | 77 | 47 | 1 | 159 | 234 | 112 | 188 | 1.17e-13 | 69.7 |
MS.gene67692.t1 | MTR_8g092985 | 39.474 | 76 | 45 | 1 | 159 | 234 | 109 | 183 | 1.17e-13 | 67.8 |
MS.gene67692.t1 | MTR_3g099650 | 36.842 | 76 | 47 | 1 | 160 | 234 | 106 | 181 | 1.26e-13 | 69.7 |
MS.gene67692.t1 | MTR_8g092930 | 40.000 | 75 | 44 | 1 | 160 | 234 | 111 | 184 | 1.41e-13 | 67.8 |
MS.gene67692.t1 | MTR_4g093830 | 43.836 | 73 | 39 | 1 | 159 | 231 | 124 | 194 | 1.45e-13 | 69.3 |
MS.gene67692.t1 | MTR_3g464780 | 44.737 | 76 | 38 | 2 | 159 | 231 | 100 | 174 | 1.67e-13 | 68.2 |
MS.gene67692.t1 | MTR_8g093010 | 38.462 | 78 | 47 | 1 | 157 | 234 | 103 | 179 | 1.72e-13 | 67.8 |
MS.gene67692.t1 | MTR_3g116000 | 42.857 | 77 | 39 | 2 | 159 | 234 | 77 | 149 | 1.97e-13 | 67.0 |
MS.gene67692.t1 | MTR_3g086700 | 53.191 | 47 | 22 | 0 | 188 | 234 | 74 | 120 | 2.10e-13 | 66.6 |
MS.gene67692.t1 | MTR_1g074190 | 40.789 | 76 | 41 | 2 | 160 | 231 | 98 | 173 | 2.15e-13 | 68.9 |
MS.gene67692.t1 | MTR_3g078120 | 35.211 | 71 | 46 | 0 | 161 | 231 | 57 | 127 | 2.46e-13 | 65.9 |
MS.gene67692.t1 | MTR_7g116210 | 49.057 | 53 | 27 | 0 | 179 | 231 | 25 | 77 | 2.46e-13 | 64.7 |
MS.gene67692.t1 | MTR_1g043410 | 40.260 | 77 | 43 | 2 | 160 | 234 | 93 | 168 | 2.51e-13 | 68.6 |
MS.gene67692.t1 | MTR_5g009210 | 38.889 | 72 | 44 | 0 | 161 | 232 | 287 | 358 | 2.75e-13 | 68.6 |
MS.gene67692.t1 | MTR_3g110190 | 36.145 | 83 | 45 | 2 | 155 | 231 | 54 | 134 | 2.98e-13 | 68.6 |
MS.gene67692.t1 | MTR_3g071300 | 38.667 | 75 | 44 | 1 | 159 | 231 | 74 | 148 | 3.20e-13 | 65.9 |
MS.gene67692.t1 | MTR_5g064890 | 57.447 | 47 | 20 | 0 | 185 | 231 | 150 | 196 | 3.24e-13 | 68.2 |
MS.gene67692.t1 | MTR_5g026720 | 45.588 | 68 | 34 | 1 | 167 | 231 | 68 | 135 | 3.52e-13 | 65.5 |
MS.gene67692.t1 | MTR_3g091620 | 33.058 | 121 | 67 | 4 | 121 | 231 | 53 | 169 | 3.65e-13 | 68.2 |
MS.gene67692.t1 | MTR_8g073120 | 39.189 | 74 | 45 | 0 | 158 | 231 | 67 | 140 | 3.65e-13 | 66.6 |
MS.gene67692.t1 | MTR_7g073200 | 42.857 | 77 | 36 | 3 | 161 | 234 | 81 | 152 | 3.68e-13 | 65.9 |
MS.gene67692.t1 | MTR_3g086730 | 53.191 | 47 | 22 | 0 | 188 | 234 | 74 | 120 | 3.91e-13 | 67.0 |
MS.gene67692.t1 | MTR_7g116200 | 49.057 | 53 | 27 | 0 | 179 | 231 | 83 | 135 | 4.26e-13 | 65.5 |
MS.gene67692.t1 | MTR_1g070425 | 40.000 | 75 | 44 | 1 | 158 | 231 | 65 | 139 | 4.83e-13 | 65.5 |
MS.gene67692.t1 | MTR_3g114500 | 46.053 | 76 | 36 | 2 | 159 | 234 | 46 | 116 | 5.30e-13 | 64.3 |
MS.gene67692.t1 | MTR_8g092960 | 37.662 | 77 | 47 | 1 | 158 | 234 | 100 | 175 | 5.60e-13 | 66.2 |
MS.gene67692.t1 | MTR_2g096350 | 38.158 | 76 | 46 | 1 | 156 | 231 | 103 | 177 | 6.47e-13 | 65.9 |
MS.gene67692.t1 | MTR_5g009200 | 38.889 | 72 | 44 | 0 | 161 | 232 | 322 | 393 | 7.48e-13 | 67.4 |
MS.gene67692.t1 | MTR_8g092840 | 37.662 | 77 | 47 | 1 | 158 | 234 | 110 | 185 | 7.61e-13 | 65.9 |
MS.gene67692.t1 | MTR_8g099495 | 36.111 | 72 | 46 | 0 | 161 | 232 | 319 | 390 | 8.44e-13 | 67.4 |
MS.gene67692.t1 | MTR_5g009190 | 37.500 | 72 | 45 | 0 | 161 | 232 | 266 | 337 | 9.51e-13 | 67.0 |
MS.gene67692.t1 | MTR_7g116180 | 40.000 | 75 | 44 | 1 | 158 | 231 | 64 | 138 | 9.86e-13 | 64.7 |
MS.gene67692.t1 | MTR_1g051105 | 38.750 | 80 | 45 | 2 | 155 | 234 | 128 | 203 | 1.04e-12 | 65.9 |
MS.gene67692.t1 | MTR_5g066250 | 52.941 | 51 | 22 | 1 | 183 | 231 | 152 | 202 | 1.34e-12 | 66.6 |
MS.gene67692.t1 | MTR_8g028465 | 37.500 | 72 | 41 | 1 | 161 | 232 | 90 | 157 | 1.48e-12 | 64.7 |
MS.gene67692.t1 | MTR_5g071930 | 41.667 | 72 | 37 | 1 | 160 | 231 | 65 | 131 | 1.55e-12 | 64.7 |
MS.gene67692.t1 | MTR_3g078450 | 38.028 | 71 | 44 | 0 | 161 | 231 | 76 | 146 | 1.80e-12 | 64.7 |
MS.gene67692.t1 | MTR_7g113800 | 37.662 | 77 | 47 | 1 | 159 | 234 | 89 | 165 | 2.24e-12 | 65.9 |
MS.gene67692.t1 | MTR_1g082550 | 35.897 | 78 | 49 | 1 | 158 | 234 | 95 | 172 | 2.28e-12 | 65.9 |
MS.gene67692.t1 | MTR_3g067995 | 49.057 | 53 | 26 | 1 | 179 | 231 | 203 | 254 | 2.51e-12 | 65.1 |
MS.gene67692.t1 | MTR_3g078470 | 28.182 | 110 | 75 | 1 | 122 | 231 | 41 | 146 | 2.87e-12 | 64.3 |
MS.gene67692.t1 | MTR_4g106680 | 36.047 | 86 | 52 | 2 | 149 | 234 | 95 | 177 | 2.97e-12 | 65.1 |
MS.gene67692.t1 | MTR_6g055030 | 37.662 | 77 | 47 | 1 | 159 | 234 | 95 | 171 | 3.17e-12 | 65.1 |
MS.gene67692.t1 | MTR_8g023400 | 56.522 | 46 | 20 | 0 | 187 | 232 | 115 | 160 | 3.55e-12 | 65.1 |
MS.gene67692.t1 | MTR_2g097620 | 34.831 | 89 | 53 | 3 | 147 | 234 | 149 | 233 | 3.67e-12 | 65.1 |
MS.gene67692.t1 | MTR_4g129420 | 54.348 | 46 | 21 | 0 | 189 | 234 | 144 | 189 | 3.69e-12 | 65.5 |
MS.gene67692.t1 | MTR_1g056350 | 38.889 | 72 | 43 | 1 | 161 | 231 | 74 | 145 | 3.81e-12 | 62.8 |
MS.gene67692.t1 | MTR_6g007670 | 35.135 | 74 | 45 | 1 | 158 | 231 | 5 | 75 | 4.37e-12 | 64.3 |
MS.gene67692.t1 | MTR_7g079290 | 51.163 | 43 | 21 | 0 | 189 | 231 | 155 | 197 | 4.40e-12 | 63.5 |
MS.gene67692.t1 | MTR_4g030070 | 47.170 | 53 | 28 | 0 | 179 | 231 | 100 | 152 | 4.73e-12 | 63.9 |
MS.gene67692.t1 | MTR_2g079320 | 34.043 | 94 | 54 | 3 | 143 | 231 | 111 | 201 | 5.07e-12 | 63.2 |
MS.gene67692.t1 | MTR_4g056590 | 36.111 | 72 | 41 | 1 | 160 | 231 | 99 | 165 | 5.09e-12 | 63.2 |
MS.gene67692.t1 | MTR_3g072630 | 36.250 | 80 | 47 | 2 | 155 | 234 | 190 | 265 | 5.99e-12 | 64.3 |
MS.gene67692.t1 | MTR_5g034790 | 52.000 | 50 | 24 | 0 | 185 | 234 | 138 | 187 | 6.82e-12 | 64.7 |
MS.gene67692.t1 | MTR_3g072630 | 36.250 | 80 | 47 | 2 | 155 | 234 | 190 | 265 | 7.37e-12 | 64.3 |
MS.gene67692.t1 | MTR_1g070140 | 38.356 | 73 | 44 | 1 | 159 | 231 | 101 | 172 | 7.71e-12 | 64.3 |
MS.gene67692.t1 | MTR_3g095560 | 35.714 | 84 | 53 | 1 | 151 | 234 | 99 | 181 | 8.46e-12 | 63.2 |
MS.gene67692.t1 | MTR_6g079660 | 36.471 | 85 | 51 | 2 | 150 | 234 | 198 | 279 | 1.10e-11 | 63.9 |
MS.gene67692.t1 | MTR_3g100400 | 51.064 | 47 | 23 | 0 | 185 | 231 | 152 | 198 | 1.15e-11 | 63.9 |
MS.gene67692.t1 | MTR_2g090905 | 45.000 | 60 | 33 | 0 | 172 | 231 | 54 | 113 | 1.19e-11 | 60.5 |
MS.gene67692.t1 | MTR_4g094725 | 33.333 | 102 | 66 | 1 | 131 | 232 | 50 | 149 | 1.20e-11 | 61.2 |
MS.gene67692.t1 | MTR_7g059360 | 40.909 | 66 | 39 | 0 | 167 | 232 | 136 | 201 | 1.37e-11 | 62.4 |
MS.gene67692.t1 | MTR_8g092970 | 54.348 | 46 | 21 | 0 | 189 | 234 | 131 | 176 | 1.47e-11 | 62.4 |
MS.gene67692.t1 | MTR_2g090950 | 34.211 | 114 | 61 | 3 | 122 | 231 | 62 | 165 | 1.59e-11 | 62.4 |
MS.gene67692.t1 | MTR_5g088720 | 36.250 | 80 | 47 | 2 | 155 | 234 | 215 | 290 | 1.91e-11 | 63.2 |
MS.gene67692.t1 | MTR_3g083480 | 36.905 | 84 | 44 | 2 | 151 | 234 | 207 | 281 | 2.21e-11 | 63.2 |
MS.gene67692.t1 | MTR_1g026070 | 39.474 | 76 | 41 | 2 | 159 | 234 | 46 | 116 | 2.52e-11 | 59.7 |
MS.gene67692.t1 | MTR_5g088720 | 36.250 | 80 | 47 | 2 | 155 | 234 | 174 | 249 | 2.58e-11 | 62.8 |
MS.gene67692.t1 | MTR_8g092990 | 54.545 | 44 | 20 | 0 | 189 | 232 | 141 | 184 | 2.60e-11 | 61.6 |
MS.gene67692.t1 | MTR_8g063660 | 30.159 | 126 | 83 | 3 | 108 | 231 | 14 | 136 | 2.66e-11 | 62.8 |
MS.gene67692.t1 | MTR_5g088720 | 36.250 | 80 | 47 | 2 | 155 | 234 | 169 | 244 | 2.75e-11 | 62.4 |
MS.gene67692.t1 | MTR_8g019710 | 53.191 | 47 | 22 | 0 | 185 | 231 | 50 | 96 | 3.43e-11 | 59.7 |
MS.gene67692.t1 | MTR_5g041310 | 38.667 | 75 | 39 | 2 | 157 | 231 | 89 | 156 | 3.60e-11 | 61.2 |
MS.gene67692.t1 | MTR_5g041330 | 39.189 | 74 | 38 | 2 | 158 | 231 | 80 | 146 | 3.75e-11 | 61.2 |
MS.gene67692.t1 | MTR_8g032690 | 48.837 | 43 | 22 | 0 | 189 | 231 | 19 | 61 | 3.97e-11 | 58.5 |
MS.gene67692.t1 | MTR_6g055030 | 56.250 | 48 | 20 | 1 | 188 | 234 | 93 | 140 | 4.81e-11 | 61.6 |
MS.gene67692.t1 | MTR_1g047180 | 37.838 | 74 | 40 | 2 | 161 | 234 | 660 | 727 | 6.33e-11 | 62.0 |
MS.gene67692.t1 | MTR_3g068005 | 40.278 | 72 | 39 | 2 | 163 | 234 | 173 | 240 | 6.82e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67692.t1 | AT4G35840 | 78.539 | 219 | 46 | 1 | 17 | 234 | 18 | 236 | 3.94e-123 | 349 |
MS.gene67692.t1 | AT2G17730 | 78.341 | 217 | 46 | 1 | 19 | 234 | 25 | 241 | 2.26e-120 | 342 |
MS.gene67692.t1 | AT4G35840 | 68.526 | 251 | 46 | 2 | 17 | 234 | 18 | 268 | 4.62e-116 | 332 |
MS.gene67692.t1 | AT5G66070 | 76.056 | 213 | 47 | 1 | 22 | 234 | 13 | 221 | 3.66e-114 | 326 |
MS.gene67692.t1 | AT5G66070 | 76.056 | 213 | 47 | 1 | 22 | 234 | 13 | 221 | 3.66e-114 | 326 |
MS.gene67692.t1 | AT2G17730 | 78.261 | 207 | 44 | 1 | 19 | 224 | 25 | 231 | 1.68e-112 | 323 |
MS.gene67692.t1 | AT5G66070 | 68.354 | 237 | 47 | 2 | 22 | 234 | 13 | 245 | 1.35e-108 | 313 |
MS.gene67692.t1 | AT5G66070 | 74.269 | 171 | 40 | 1 | 24 | 194 | 15 | 181 | 1.50e-81 | 242 |
MS.gene67692.t1 | AT5G66070 | 65.128 | 195 | 40 | 2 | 24 | 194 | 15 | 205 | 7.75e-76 | 228 |
MS.gene67692.t1 | AT1G74410 | 39.000 | 200 | 120 | 1 | 33 | 232 | 22 | 219 | 6.78e-44 | 147 |
MS.gene67692.t1 | AT3G20395 | 34.921 | 189 | 110 | 4 | 47 | 234 | 40 | 216 | 4.06e-34 | 122 |
MS.gene67692.t1 | AT5G05280 | 49.333 | 75 | 27 | 2 | 160 | 234 | 95 | 158 | 1.14e-15 | 72.8 |
MS.gene67692.t1 | AT3G03550 | 59.574 | 47 | 19 | 0 | 185 | 231 | 155 | 201 | 1.60e-15 | 75.1 |
MS.gene67692.t1 | AT3G16720 | 40.541 | 74 | 41 | 1 | 158 | 231 | 91 | 161 | 3.56e-15 | 73.6 |
MS.gene67692.t1 | AT2G46493 | 35.366 | 82 | 53 | 0 | 150 | 231 | 99 | 180 | 5.80e-15 | 70.9 |
MS.gene67692.t1 | AT2G17450 | 39.560 | 91 | 45 | 2 | 154 | 234 | 57 | 147 | 6.03e-15 | 70.9 |
MS.gene67692.t1 | AT5G17600 | 62.791 | 43 | 16 | 0 | 189 | 231 | 142 | 184 | 6.17e-15 | 73.6 |
MS.gene67692.t1 | AT2G27940 | 41.667 | 72 | 39 | 1 | 160 | 231 | 114 | 182 | 1.17e-14 | 71.2 |
MS.gene67692.t1 | AT5G42200 | 42.667 | 75 | 41 | 1 | 160 | 234 | 77 | 149 | 1.36e-14 | 69.3 |
MS.gene67692.t1 | AT4G30370 | 39.726 | 73 | 42 | 1 | 159 | 231 | 87 | 157 | 2.13e-14 | 69.3 |
MS.gene67692.t1 | AT4G28890 | 42.254 | 71 | 39 | 1 | 161 | 231 | 97 | 165 | 2.74e-14 | 71.6 |
MS.gene67692.t1 | AT1G72200 | 41.558 | 77 | 44 | 1 | 159 | 234 | 113 | 189 | 2.87e-14 | 71.6 |
MS.gene67692.t1 | AT3G10910 | 37.624 | 101 | 46 | 3 | 145 | 234 | 65 | 159 | 3.03e-14 | 68.9 |
MS.gene67692.t1 | AT1G76410 | 36.559 | 93 | 58 | 1 | 142 | 234 | 58 | 149 | 3.13e-14 | 68.9 |
MS.gene67692.t1 | AT1G20823 | 39.744 | 78 | 46 | 1 | 157 | 234 | 80 | 156 | 4.04e-14 | 68.9 |
MS.gene67692.t1 | AT1G49200 | 41.558 | 77 | 42 | 2 | 159 | 234 | 107 | 181 | 4.68e-14 | 69.3 |
MS.gene67692.t1 | AT3G18773 | 40.741 | 81 | 45 | 2 | 155 | 234 | 97 | 175 | 6.10e-14 | 68.9 |
MS.gene67692.t1 | AT2G46494 | 35.366 | 82 | 53 | 0 | 150 | 231 | 277 | 358 | 8.64e-14 | 70.1 |
MS.gene67692.t1 | AT1G04360 | 41.026 | 78 | 41 | 1 | 159 | 231 | 99 | 176 | 9.18e-14 | 70.1 |
MS.gene67692.t1 | AT5G01880 | 40.541 | 74 | 42 | 1 | 161 | 234 | 79 | 150 | 1.09e-13 | 67.0 |
MS.gene67692.t1 | AT2G18670 | 41.096 | 73 | 42 | 1 | 159 | 231 | 81 | 152 | 1.70e-13 | 67.0 |
MS.gene67692.t1 | AT1G72220 | 53.191 | 47 | 22 | 0 | 185 | 231 | 173 | 219 | 1.77e-13 | 69.3 |
MS.gene67692.t1 | AT2G20030 | 40.845 | 71 | 40 | 1 | 161 | 231 | 98 | 166 | 2.36e-13 | 68.9 |
MS.gene67692.t1 | AT5G10380 | 60.000 | 45 | 18 | 0 | 187 | 231 | 133 | 177 | 2.41e-13 | 68.6 |
MS.gene67692.t1 | AT2G35910 | 35.294 | 102 | 60 | 2 | 132 | 231 | 92 | 189 | 2.41e-13 | 67.4 |
MS.gene67692.t1 | AT2G46160 | 37.179 | 78 | 43 | 1 | 161 | 232 | 104 | 181 | 2.53e-13 | 67.0 |
MS.gene67692.t1 | AT2G46160 | 37.179 | 78 | 43 | 1 | 161 | 232 | 104 | 181 | 2.53e-13 | 67.0 |
MS.gene67692.t1 | AT1G28040 | 31.579 | 95 | 65 | 0 | 137 | 231 | 201 | 295 | 2.64e-13 | 68.2 |
MS.gene67692.t1 | AT4G10150 | 54.348 | 46 | 21 | 0 | 189 | 234 | 111 | 156 | 2.72e-13 | 67.4 |
MS.gene67692.t1 | AT4G10160 | 54.348 | 46 | 21 | 0 | 189 | 234 | 97 | 142 | 3.21e-13 | 67.0 |
MS.gene67692.t1 | AT5G20910 | 35.227 | 88 | 53 | 2 | 150 | 234 | 188 | 274 | 3.86e-13 | 67.8 |
MS.gene67692.t1 | AT4G33565 | 59.574 | 47 | 19 | 0 | 185 | 231 | 213 | 259 | 3.99e-13 | 68.2 |
MS.gene67692.t1 | AT2G25410 | 33.333 | 111 | 64 | 3 | 126 | 233 | 268 | 371 | 4.54e-13 | 68.2 |
MS.gene67692.t1 | AT4G15975 | 55.556 | 45 | 20 | 0 | 187 | 231 | 74 | 118 | 5.92e-13 | 66.6 |
MS.gene67692.t1 | AT3G05200 | 37.975 | 79 | 48 | 1 | 157 | 234 | 95 | 173 | 6.89e-13 | 67.8 |
MS.gene67692.t1 | AT2G35000 | 39.241 | 79 | 43 | 2 | 159 | 234 | 104 | 180 | 7.33e-13 | 67.4 |
MS.gene67692.t1 | AT5G53110 | 36.620 | 71 | 45 | 0 | 161 | 231 | 302 | 372 | 7.77e-13 | 67.4 |
MS.gene67692.t1 | AT4G40070 | 40.580 | 69 | 34 | 1 | 166 | 234 | 108 | 169 | 8.30e-13 | 67.0 |
MS.gene67692.t1 | AT3G56580 | 40.580 | 69 | 38 | 2 | 166 | 234 | 165 | 230 | 8.49e-13 | 67.0 |
MS.gene67692.t1 | AT3G56580 | 40.580 | 69 | 38 | 2 | 166 | 234 | 165 | 230 | 8.49e-13 | 67.0 |
MS.gene67692.t1 | AT3G56580 | 40.580 | 69 | 38 | 2 | 166 | 234 | 165 | 230 | 8.49e-13 | 67.0 |
MS.gene67692.t1 | AT4G26580 | 40.698 | 86 | 43 | 4 | 155 | 234 | 250 | 333 | 8.84e-13 | 67.0 |
MS.gene67692.t1 | AT4G26580 | 40.698 | 86 | 43 | 4 | 155 | 234 | 250 | 333 | 8.84e-13 | 67.0 |
MS.gene67692.t1 | AT1G14200 | 32.955 | 88 | 52 | 3 | 150 | 234 | 70 | 153 | 1.02e-12 | 64.7 |
MS.gene67692.t1 | AT4G09100 | 36.986 | 73 | 45 | 1 | 160 | 231 | 55 | 127 | 1.18e-12 | 63.5 |
MS.gene67692.t1 | AT1G53010 | 36.145 | 83 | 48 | 2 | 157 | 234 | 93 | 175 | 1.26e-12 | 64.7 |
MS.gene67692.t1 | AT3G18930 | 60.465 | 43 | 17 | 0 | 189 | 231 | 156 | 198 | 1.66e-12 | 66.6 |
MS.gene67692.t1 | AT3G18930 | 60.465 | 43 | 17 | 0 | 189 | 231 | 156 | 198 | 1.66e-12 | 66.6 |
MS.gene67692.t1 | AT3G18930 | 60.465 | 43 | 17 | 0 | 189 | 231 | 156 | 198 | 1.66e-12 | 66.6 |
MS.gene67692.t1 | AT1G49220 | 38.462 | 78 | 47 | 1 | 157 | 234 | 104 | 180 | 1.78e-12 | 65.5 |
MS.gene67692.t1 | AT2G46495 | 48.077 | 52 | 27 | 0 | 180 | 231 | 311 | 362 | 2.01e-12 | 66.2 |
MS.gene67692.t1 | AT2G46495 | 48.077 | 52 | 27 | 0 | 180 | 231 | 283 | 334 | 2.33e-12 | 65.9 |
MS.gene67692.t1 | AT3G48030 | 37.209 | 86 | 52 | 2 | 149 | 234 | 91 | 174 | 2.73e-12 | 65.1 |
MS.gene67692.t1 | AT5G06490 | 36.842 | 76 | 43 | 1 | 161 | 231 | 96 | 171 | 2.78e-12 | 63.9 |
MS.gene67692.t1 | AT5G43420 | 55.814 | 43 | 19 | 0 | 189 | 231 | 138 | 180 | 2.85e-12 | 65.9 |
MS.gene67692.t1 | AT3G48030 | 37.209 | 86 | 52 | 2 | 149 | 234 | 169 | 252 | 3.11e-12 | 65.5 |
MS.gene67692.t1 | AT3G61550 | 35.000 | 80 | 43 | 1 | 161 | 231 | 99 | 178 | 3.11e-12 | 63.9 |
MS.gene67692.t1 | AT2G18650 | 54.348 | 46 | 21 | 0 | 189 | 234 | 126 | 171 | 3.81e-12 | 65.5 |
MS.gene67692.t1 | AT5G07040 | 32.258 | 93 | 61 | 1 | 141 | 231 | 44 | 136 | 4.05e-12 | 62.8 |
MS.gene67692.t1 | AT1G72310 | 36.364 | 77 | 46 | 1 | 155 | 231 | 96 | 169 | 4.62e-12 | 64.7 |
MS.gene67692.t1 | AT1G33480 | 53.488 | 43 | 20 | 0 | 189 | 231 | 100 | 142 | 4.62e-12 | 64.3 |
MS.gene67692.t1 | AT4G17905 | 45.000 | 60 | 31 | 1 | 172 | 231 | 140 | 197 | 4.95e-12 | 64.7 |
MS.gene67692.t1 | AT1G22500 | 38.667 | 75 | 45 | 1 | 161 | 234 | 89 | 163 | 5.16e-12 | 65.1 |
MS.gene67692.t1 | AT4G17905 | 45.000 | 60 | 31 | 1 | 172 | 231 | 166 | 223 | 5.17e-12 | 64.7 |
MS.gene67692.t1 | AT1G53820 | 53.333 | 45 | 21 | 0 | 187 | 231 | 118 | 162 | 5.35e-12 | 64.7 |
MS.gene67692.t1 | AT1G49210 | 40.260 | 77 | 43 | 2 | 159 | 234 | 106 | 180 | 5.51e-12 | 63.5 |
MS.gene67692.t1 | AT3G19950 | 34.118 | 85 | 53 | 2 | 150 | 234 | 237 | 318 | 6.74e-12 | 64.7 |
MS.gene67692.t1 | AT3G19950 | 34.118 | 85 | 53 | 2 | 150 | 234 | 237 | 318 | 6.74e-12 | 64.7 |
MS.gene67692.t1 | AT4G30400 | 55.814 | 43 | 19 | 0 | 189 | 231 | 134 | 176 | 7.83e-12 | 64.7 |
MS.gene67692.t1 | AT3G19950 | 34.118 | 85 | 53 | 2 | 150 | 234 | 179 | 260 | 9.03e-12 | 63.9 |
MS.gene67692.t1 | AT1G60360 | 36.250 | 80 | 48 | 2 | 155 | 234 | 192 | 268 | 1.14e-11 | 63.9 |
MS.gene67692.t1 | AT2G34000 | 36.000 | 75 | 46 | 1 | 160 | 232 | 60 | 134 | 1.15e-11 | 61.2 |
MS.gene67692.t1 | AT5G27420 | 35.065 | 77 | 49 | 1 | 159 | 234 | 93 | 169 | 1.16e-11 | 63.9 |
MS.gene67692.t1 | AT2G40830 | 37.681 | 69 | 40 | 2 | 166 | 234 | 169 | 234 | 1.60e-11 | 63.2 |
MS.gene67692.t1 | AT2G40830 | 37.681 | 69 | 40 | 2 | 166 | 234 | 169 | 234 | 1.60e-11 | 63.2 |
MS.gene67692.t1 | AT2G40830 | 37.681 | 69 | 40 | 2 | 166 | 234 | 169 | 234 | 1.60e-11 | 63.2 |
MS.gene67692.t1 | AT2G40830 | 37.681 | 69 | 40 | 2 | 166 | 234 | 169 | 234 | 1.60e-11 | 63.2 |
MS.gene67692.t1 | AT1G23980 | 32.653 | 98 | 63 | 2 | 134 | 231 | 92 | 186 | 1.62e-11 | 63.5 |
MS.gene67692.t1 | AT5G57750 | 52.273 | 44 | 21 | 0 | 188 | 231 | 121 | 164 | 1.91e-11 | 62.0 |
MS.gene67692.t1 | AT4G24015 | 43.333 | 60 | 34 | 0 | 172 | 231 | 88 | 147 | 2.26e-11 | 60.8 |
MS.gene67692.t1 | AT4G09120 | 33.708 | 89 | 50 | 2 | 151 | 234 | 84 | 168 | 2.55e-11 | 62.8 |
MS.gene67692.t1 | AT4G09110 | 35.955 | 89 | 48 | 2 | 151 | 234 | 84 | 168 | 2.83e-11 | 62.4 |
MS.gene67692.t1 | AT2G44330 | 35.484 | 93 | 55 | 3 | 145 | 234 | 50 | 140 | 2.91e-11 | 60.8 |
MS.gene67692.t1 | AT5G05810 | 50.980 | 51 | 23 | 1 | 183 | 231 | 138 | 188 | 2.97e-11 | 62.8 |
MS.gene67692.t1 | AT2G34990 | 50.000 | 48 | 24 | 0 | 187 | 234 | 116 | 163 | 3.19e-11 | 62.4 |
MS.gene67692.t1 | AT1G04790 | 38.028 | 71 | 38 | 2 | 161 | 231 | 566 | 630 | 3.19e-11 | 63.2 |
MS.gene67692.t1 | AT5G47610 | 32.500 | 80 | 53 | 1 | 155 | 234 | 74 | 152 | 3.22e-11 | 60.5 |
MS.gene67692.t1 | AT5G56340 | 36.471 | 85 | 45 | 2 | 150 | 234 | 228 | 303 | 3.82e-11 | 62.4 |
MS.gene67692.t1 | AT2G34990 | 50.000 | 48 | 24 | 0 | 187 | 234 | 94 | 141 | 3.84e-11 | 62.0 |
MS.gene67692.t1 | AT1G35330 | 35.366 | 82 | 52 | 1 | 154 | 234 | 93 | 174 | 4.15e-11 | 62.0 |
MS.gene67692.t1 | AT4G26400 | 41.176 | 68 | 31 | 2 | 167 | 234 | 227 | 285 | 5.27e-11 | 62.0 |
MS.gene67692.t1 | AT4G26400 | 41.176 | 68 | 31 | 2 | 167 | 234 | 227 | 285 | 5.27e-11 | 62.0 |
MS.gene67692.t1 | AT1G49230 | 50.980 | 51 | 25 | 0 | 184 | 234 | 126 | 176 | 5.62e-11 | 60.8 |
MS.gene67692.t1 | AT3G10815 | 31.183 | 93 | 60 | 2 | 142 | 234 | 77 | 165 | 5.87e-11 | 60.5 |
MS.gene67692.t1 | AT2G47560 | 43.077 | 65 | 37 | 0 | 167 | 231 | 86 | 150 | 7.02e-11 | 60.5 |
MS.gene67692.t1 | AT4G35480 | 37.079 | 89 | 43 | 2 | 159 | 234 | 70 | 158 | 7.12e-11 | 60.1 |
MS.gene67692.t1 | AT3G55530 | 44.444 | 54 | 29 | 1 | 178 | 231 | 200 | 252 | 8.11e-11 | 60.8 |
MS.gene67692.t1 | AT4G38140 | 50.000 | 48 | 23 | 1 | 185 | 231 | 58 | 105 | 9.32e-11 | 58.5 |
MS.gene67692.t1 | AT2G44578 | 44.643 | 56 | 28 | 1 | 182 | 234 | 60 | 115 | 9.90e-11 | 58.5 |
Find 51 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTCTTTGTTCGGTTCTTT+TGG | 0.184520 | 5.2:-13913649 | MS.gene67692:CDS |
TTGAATCATCCCTTGTTCTT+TGG | 0.242713 | 5.2:-13912980 | MS.gene67692:CDS |
GTTGACAAAGTTAAACAATT+TGG | 0.246551 | 5.2:-13913619 | MS.gene67692:CDS |
TATGCAGTTGGAACATTATT+GGG | 0.267904 | 5.2:-13913104 | MS.gene67692:intron |
CTTTGGCATTCTGATGAATC+TGG | 0.268428 | 5.2:-13912963 | MS.gene67692:CDS |
TACAGATCTCTTCTGCATAA+TGG | 0.280127 | 5.2:+13912182 | None:intergenic |
CAAAATCACTGCTGACAATA+TGG | 0.283427 | 5.2:-13912469 | MS.gene67692:CDS |
CTCGCAATTTCTGTTATCAT+TGG | 0.306616 | 5.2:-13913592 | MS.gene67692:CDS |
TTATGCAGTTGGAACATTAT+TGG | 0.308342 | 5.2:-13913105 | MS.gene67692:intron |
CATTCTGATGAATCTGGAAT+TGG | 0.345918 | 5.2:-13912957 | MS.gene67692:CDS |
CCTTCTCGTTCTTCTTTGTT+CGG | 0.352151 | 5.2:-13913658 | MS.gene67692:CDS |
ACAGATCTCTTCTGCATAAT+GGG | 0.375305 | 5.2:+13912183 | None:intergenic |
TGAACAGCACTCAACATTGC+AGG | 0.404709 | 5.2:+13912698 | None:intergenic |
ACCTCGAATGAAACCGCTTT+CGG | 0.406134 | 5.2:+13913049 | None:intergenic |
GCTGCCGTTGGTGCTATATC+AGG | 0.409617 | 5.2:-13913026 | MS.gene67692:CDS |
GAACGAGAAGGACATGGATT+TGG | 0.415770 | 5.2:+13913670 | None:intergenic |
GCTTTGACAGGAGCTTTGAT+AGG | 0.421666 | 5.2:-13913080 | MS.gene67692:CDS |
TTCTTGTTCAGTTTGTCTCC+AGG | 0.423090 | 5.2:-13912427 | MS.gene67692:intron |
ACATTATTGGGTGCTTTGAC+AGG | 0.432101 | 5.2:-13913092 | MS.gene67692:CDS |
CAAAGGGTTATCCGTAGATT+CGG | 0.437753 | 5.2:-13912511 | MS.gene67692:CDS |
ATCTACCTTGCATAGATATG+TGG | 0.445633 | 5.2:-13912226 | MS.gene67692:CDS |
GCTGACAATATGGAGGCATC+AGG | 0.449417 | 5.2:-13912459 | MS.gene67692:CDS |
GTTCAAAACATCTTTGACAT+TGG | 0.455979 | 5.2:-13912540 | MS.gene67692:CDS |
CGAATCTACGGATAACCCTT+TGG | 0.456589 | 5.2:+13912512 | None:intergenic |
CAAAACATCTTTGACATTGG+TGG | 0.466592 | 5.2:-13912537 | MS.gene67692:CDS |
ACCGAAAGCGGTTTCATTCG+AGG | 0.472995 | 5.2:-13913050 | MS.gene67692:CDS |
TTCATTCGAGGTGCTGCCGT+TGG | 0.491747 | 5.2:-13913038 | MS.gene67692:CDS |
TGTTTCCAGGACTTTCAACT+TGG | 0.497160 | 5.2:-13912290 | MS.gene67692:intron |
GTTGAGTGCTGTTCAAAGTC+AGG | 0.500376 | 5.2:-13912690 | MS.gene67692:intron |
CATCAGAATGCCAAAGAACA+AGG | 0.502078 | 5.2:+13912970 | None:intergenic |
TTTGACATTGGTGGTTCCAA+AGG | 0.524386 | 5.2:-13912528 | MS.gene67692:CDS |
TTGACATTGGTGGTTCCAAA+GGG | 0.534675 | 5.2:-13912527 | MS.gene67692:CDS |
CTGACAATATGGAGGCATCA+GGG | 0.538346 | 5.2:-13912458 | MS.gene67692:CDS |
AGACTTGTGCGTGAGAGGAT+AGG | 0.548829 | 5.2:-13912722 | MS.gene67692:CDS |
TTATTGTAAGTTTGTTGAGT+GGG | 0.555503 | 5.2:-13912745 | MS.gene67692:CDS |
GATCTTCGAAACCGAATCTA+CGG | 0.586617 | 5.2:+13912500 | None:intergenic |
CAATGATAACAGAAATTGCG+AGG | 0.591128 | 5.2:+13913593 | None:intergenic |
AGCTCCTGATATAGCACCAA+CGG | 0.599233 | 5.2:+13913022 | None:intergenic |
AAAGAAGAACGAGAAGGACA+TGG | 0.601349 | 5.2:+13913664 | None:intergenic |
CAAACCTAATGCAAAACAGA+AGG | 0.616968 | 5.2:+13913546 | None:intergenic |
AAAAGCCACATATCTATGCA+AGG | 0.625321 | 5.2:+13912221 | None:intergenic |
GTTATTGTAAGTTTGTTGAG+TGG | 0.631657 | 5.2:-13912746 | MS.gene67692:CDS |
ATCAGAATGCCAAAGAACAA+GGG | 0.633081 | 5.2:+13912971 | None:intergenic |
GTGGGAGACTTGTGCGTGAG+AGG | 0.638826 | 5.2:-13912727 | MS.gene67692:CDS |
TGACAATATGGAGGCATCAG+GGG | 0.638879 | 5.2:-13912457 | MS.gene67692:CDS |
CCGAACAAAGAAGAACGAGA+AGG | 0.645534 | 5.2:+13913658 | None:intergenic |
TGTTGAAACAAGCTTTGATG+AGG | 0.659709 | 5.2:-13912562 | MS.gene67692:CDS |
ATAGGTCAAGAGACCGAAAG+CGG | 0.669182 | 5.2:-13913062 | MS.gene67692:CDS |
AATGATAACAGAAATTGCGA+GGG | 0.676404 | 5.2:+13913594 | None:intergenic |
AATCACTGCTGACAATATGG+AGG | 0.690081 | 5.2:-13912466 | MS.gene67692:CDS |
TGAAACATGTGATGACAATG+AGG | 0.720588 | 5.2:+13912248 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACAAAATTTACAAAATTGT+AGG | - | chr5.2:13912607-13912626 | MS.gene67692:intron | 15.0% |
!! | ATGATAAATAATAACTCAAA+AGG | + | chr5.2:13913028-13913047 | None:intergenic | 15.0% |
!! | TGATAAATAATAACTCAAAA+GGG | + | chr5.2:13913027-13913046 | None:intergenic | 15.0% |
!!! | TTTATATGTTTGAAGTTTTA+AGG | - | chr5.2:13912678-13912697 | MS.gene67692:intron | 15.0% |
!!! | TTTATGATATTTTGAAGATT+GGG | - | chr5.2:13912528-13912547 | MS.gene67692:CDS | 15.0% |
!!! | TTTTGTTTGTTTTTTGAATA+AGG | - | chr5.2:13912716-13912735 | MS.gene67692:CDS | 15.0% |
!!! | TTTTTTGAATAAGGTTTAAT+GGG | - | chr5.2:13912725-13912744 | MS.gene67692:CDS | 15.0% |
!! | TAGAAGAAAAAATGAAACTT+GGG | - | chr5.2:13912498-13912517 | MS.gene67692:CDS | 20.0% |
!! | TTAGAAGAAAAAATGAAACT+TGG | - | chr5.2:13912497-13912516 | MS.gene67692:CDS | 20.0% |
!!! | ATTTATGATCTTCTATTTCT+TGG | - | chr5.2:13912632-13912651 | MS.gene67692:intron | 20.0% |
!!! | GATTTGATTTTGATTGATAT+TGG | - | chr5.2:13913531-13913550 | MS.gene67692:intron | 20.0% |
!!! | GTTTATGATATTTTGAAGAT+TGG | - | chr5.2:13912527-13912546 | MS.gene67692:CDS | 20.0% |
!!! | GTTTTTTGAATAAGGTTTAA+TGG | - | chr5.2:13912724-13912743 | MS.gene67692:CDS | 20.0% |
!!! | TGTTCAAAAGGATTTTATTA+AGG | - | chr5.2:13913207-13913226 | MS.gene67692:intron | 20.0% |
!!! | TTACACTTTTTTTATCAGAT+GGG | - | chr5.2:13913275-13913294 | MS.gene67692:intron | 20.0% |
!!! | TTTGAAGTTTTAAGGTTTAA+TGG | - | chr5.2:13912686-13912705 | MS.gene67692:intron | 20.0% |
! | GTTGACAAAGTTAAACAATT+TGG | - | chr5.2:13912244-13912263 | MS.gene67692:CDS | 25.0% |
!! | AATTGGTTGTCTTTTATACT+TGG | - | chr5.2:13912923-13912942 | MS.gene67692:intron | 25.0% |
!! | GGATTTTCAACATTTATATG+TGG | - | chr5.2:13912653-13912672 | MS.gene67692:intron | 25.0% |
!! | GTTTGGATTTTTCATTGTTT+TGG | - | chr5.2:13912550-13912569 | MS.gene67692:CDS | 25.0% |
!!! | CTTACACTTTTTTTATCAGA+TGG | - | chr5.2:13913274-13913293 | MS.gene67692:intron | 25.0% |
!!! | GTACTTTTGTTTTGTTCAAA+AGG | - | chr5.2:13913195-13913214 | MS.gene67692:intron | 25.0% |
!!! | TGATCTTTTTGTGTTGTTTT+GGG | - | chr5.2:13912374-13912393 | MS.gene67692:intron | 25.0% |
!!! | TTATTGTAAGTTTGTTGAGT+GGG | - | chr5.2:13913118-13913137 | MS.gene67692:intron | 25.0% |
!!! | TTGATCTTTTTGTGTTGTTT+TGG | - | chr5.2:13912373-13912392 | MS.gene67692:intron | 25.0% |
AAGAAAAAATGAAACTTGGG+AGG | - | chr5.2:13912501-13912520 | MS.gene67692:CDS | 30.0% | |
AATGATAACAGAAATTGCGA+GGG | + | chr5.2:13912272-13912291 | None:intergenic | 30.0% | |
ATCAATCTGCATAACTCAAA+AGG | + | chr5.2:13913097-13913116 | None:intergenic | 30.0% | |
GTTCAAAACATCTTTGACAT+TGG | - | chr5.2:13913323-13913342 | MS.gene67692:intron | 30.0% | |
TATGCAGTTGGAACATTATT+GGG | - | chr5.2:13912759-13912778 | MS.gene67692:intron | 30.0% | |
TTATGCAGTTGGAACATTAT+TGG | - | chr5.2:13912758-13912777 | MS.gene67692:intron | 30.0% | |
! | TATTGGCATTTTCCGATTAT+TGG | - | chr5.2:13913548-13913567 | MS.gene67692:intron | 30.0% |
!! | GATATTTTGAAGATTGGGTT+TGG | - | chr5.2:13912533-13912552 | MS.gene67692:CDS | 30.0% |
!! | GTTATTGTAAGTTTGTTGAG+TGG | - | chr5.2:13913117-13913136 | MS.gene67692:intron | 30.0% |
!!! | CAGCAGTGATTTTGATTTTT+GGG | + | chr5.2:13913388-13913407 | None:intergenic | 30.0% |
!!! | GTTGTTTTGTTTTATGCAGT+TGG | - | chr5.2:13912747-13912766 | MS.gene67692:CDS | 30.0% |
!!! | TCAGCAGTGATTTTGATTTT+TGG | + | chr5.2:13913389-13913408 | None:intergenic | 30.0% |
!!! | TGTTGTTTTGGGTTTTTTGT+GGG | - | chr5.2:13912385-13912404 | MS.gene67692:intron | 30.0% |
AAAAAATGAAACTTGGGAGG+TGG | - | chr5.2:13912504-13912523 | MS.gene67692:CDS | 35.0% | |
AAAAATGAAACTTGGGAGGT+GGG | - | chr5.2:13912505-13912524 | MS.gene67692:CDS | 35.0% | |
AAAAGCCACATATCTATGCA+AGG | + | chr5.2:13913645-13913664 | None:intergenic | 35.0% | |
AAAGTGCAAAAAAACCAACC+TGG | + | chr5.2:13913457-13913476 | None:intergenic | 35.0% | |
ACAGATCTCTTCTGCATAAT+GGG | + | chr5.2:13913683-13913702 | None:intergenic | 35.0% | |
AGAACACTTTGTTCATGTCA+TGG | + | chr5.2:13913506-13913525 | None:intergenic | 35.0% | |
ATCAGAATGCCAAAGAACAA+GGG | + | chr5.2:13912895-13912914 | None:intergenic | 35.0% | |
ATCTACCTTGCATAGATATG+TGG | - | chr5.2:13913637-13913656 | MS.gene67692:CDS | 35.0% | |
CAAAACATCTTTGACATTGG+TGG | - | chr5.2:13913326-13913345 | MS.gene67692:intron | 35.0% | |
CAAAATCACTGCTGACAATA+TGG | - | chr5.2:13913394-13913413 | MS.gene67692:intron | 35.0% | |
CAAACCTAATGCAAAACAGA+AGG | + | chr5.2:13912320-13912339 | None:intergenic | 35.0% | |
CAATGATAACAGAAATTGCG+AGG | + | chr5.2:13912273-13912292 | None:intergenic | 35.0% | |
CCTGGAAACATACCAATAAT+CGG | + | chr5.2:13913563-13913582 | None:intergenic | 35.0% | |
CTCGCAATTTCTGTTATCAT+TGG | - | chr5.2:13912271-13912290 | MS.gene67692:CDS | 35.0% | |
GAACACTTTGTTCATGTCAT+GGG | + | chr5.2:13913505-13913524 | None:intergenic | 35.0% | |
TACAGATCTCTTCTGCATAA+TGG | + | chr5.2:13913684-13913703 | None:intergenic | 35.0% | |
TGAAACATGTGATGACAATG+AGG | + | chr5.2:13913618-13913637 | None:intergenic | 35.0% | |
TTGAATCATCCCTTGTTCTT+TGG | - | chr5.2:13912883-13912902 | MS.gene67692:intron | 35.0% | |
! | CAAGAGATCTTTTCTTGTGT+TGG | - | chr5.2:13912963-13912982 | MS.gene67692:CDS | 35.0% |
! | CATTCTGATGAATCTGGAAT+TGG | - | chr5.2:13912906-13912925 | MS.gene67692:intron | 35.0% |
! | CTTCTTTGTTCGGTTCTTTT+GGG | - | chr5.2:13912215-13912234 | MS.gene67692:CDS | 35.0% |
! | GCATAGATATGTGGCTTTTA+AGG | - | chr5.2:13913646-13913665 | MS.gene67692:CDS | 35.0% |
! | TCTTCTTTGTTCGGTTCTTT+TGG | - | chr5.2:13912214-13912233 | MS.gene67692:CDS | 35.0% |
! | TGTTGAAACAAGCTTTGATG+AGG | - | chr5.2:13913301-13913320 | MS.gene67692:intron | 35.0% |
! | TTGACCTTCTGTTTTGCATT+AGG | - | chr5.2:13912313-13912332 | MS.gene67692:intron | 35.0% |
!! | GTCTTTTATACTTGGTGAGT+AGG | - | chr5.2:13912931-13912950 | MS.gene67692:intron | 35.0% |
!!! | GTGTTGTTTTGGGTTTTTTG+TGG | - | chr5.2:13912384-13912403 | MS.gene67692:intron | 35.0% |
AAAGAAGAACGAGAAGGACA+TGG | + | chr5.2:13912202-13912221 | None:intergenic | 40.0% | |
AATCACTGCTGACAATATGG+AGG | - | chr5.2:13913397-13913416 | MS.gene67692:intron | 40.0% | |
ACATTATTGGGTGCTTTGAC+AGG | - | chr5.2:13912771-13912790 | MS.gene67692:intron | 40.0% | |
CAAAGGGTTATCCGTAGATT+CGG | - | chr5.2:13913352-13913371 | MS.gene67692:intron | 40.0% | |
CATCAGAATGCCAAAGAACA+AGG | + | chr5.2:13912896-13912915 | None:intergenic | 40.0% | |
CCGATTATTGGTATGTTTCC+AGG | - | chr5.2:13913560-13913579 | MS.gene67692:CDS | 40.0% | |
CCTTCTCGTTCTTCTTTGTT+CGG | - | chr5.2:13912205-13912224 | MS.gene67692:CDS | 40.0% | |
CTTTGGCATTCTGATGAATC+TGG | - | chr5.2:13912900-13912919 | MS.gene67692:intron | 40.0% | |
GATCTTCGAAACCGAATCTA+CGG | + | chr5.2:13913366-13913385 | None:intergenic | 40.0% | |
TGTTTCCAGGACTTTCAACT+TGG | - | chr5.2:13913573-13913592 | MS.gene67692:CDS | 40.0% | |
TTCTTGTTCAGTTTGTCTCC+AGG | - | chr5.2:13913436-13913455 | MS.gene67692:intron | 40.0% | |
! | TTGACATTGGTGGTTCCAAA+GGG | - | chr5.2:13913336-13913355 | MS.gene67692:intron | 40.0% |
! | TTTGACATTGGTGGTTCCAA+AGG | - | chr5.2:13913335-13913354 | MS.gene67692:intron | 40.0% |
!!! | GATATGTGGCTTTTAAGGCA+TGG | - | chr5.2:13913651-13913670 | MS.gene67692:CDS | 40.0% |
ACCTCGAATGAAACCGCTTT+CGG | + | chr5.2:13912817-13912836 | None:intergenic | 45.0% | |
AGCTCCTGATATAGCACCAA+CGG | + | chr5.2:13912844-13912863 | None:intergenic | 45.0% | |
ATAGGTCAAGAGACCGAAAG+CGG | - | chr5.2:13912801-13912820 | MS.gene67692:intron | 45.0% | |
CCGAACAAAGAAGAACGAGA+AGG | + | chr5.2:13912208-13912227 | None:intergenic | 45.0% | |
CGAATCTACGGATAACCCTT+TGG | + | chr5.2:13913354-13913373 | None:intergenic | 45.0% | |
GAACGAGAAGGACATGGATT+TGG | + | chr5.2:13912196-13912215 | None:intergenic | 45.0% | |
TGAACAGCACTCAACATTGC+AGG | + | chr5.2:13913168-13913187 | None:intergenic | 45.0% | |
TGTTCAGTTTGTCTCCAGGT+TGG | - | chr5.2:13913440-13913459 | MS.gene67692:intron | 45.0% | |
! | GCTTTGACAGGAGCTTTGAT+AGG | - | chr5.2:13912783-13912802 | MS.gene67692:intron | 45.0% |
! | GTTGAGTGCTGTTCAAAGTC+AGG | - | chr5.2:13913173-13913192 | MS.gene67692:intron | 45.0% |
! | TCTCTCCAAGTTGAAAGTCC+TGG | + | chr5.2:13913581-13913600 | None:intergenic | 45.0% |
!! | CTGACAATATGGAGGCATCA+GGG | - | chr5.2:13913405-13913424 | MS.gene67692:intron | 45.0% |
!! | TGACAATATGGAGGCATCAG+GGG | - | chr5.2:13913406-13913425 | MS.gene67692:intron | 45.0% |
ACCGAAAGCGGTTTCATTCG+AGG | - | chr5.2:13912813-13912832 | MS.gene67692:intron | 50.0% | |
AGACTTGTGCGTGAGAGGAT+AGG | - | chr5.2:13913141-13913160 | MS.gene67692:intron | 50.0% | |
!! | GCTGACAATATGGAGGCATC+AGG | - | chr5.2:13913404-13913423 | MS.gene67692:intron | 50.0% |
!! | GCTGCCGTTGGTGCTATATC+AGG | - | chr5.2:13912837-13912856 | MS.gene67692:intron | 55.0% |
!! | TTCATTCGAGGTGCTGCCGT+TGG | - | chr5.2:13912825-13912844 | MS.gene67692:intron | 55.0% |
GTGGGAGACTTGTGCGTGAG+AGG | - | chr5.2:13913136-13913155 | MS.gene67692:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 13912181 | 13913704 | 13912181 | ID=MS.gene67692 |
chr5.2 | mRNA | 13912181 | 13913704 | 13912181 | ID=MS.gene67692.t1;Parent=MS.gene67692 |
chr5.2 | exon | 13913551 | 13913704 | 13913551 | ID=MS.gene67692.t1.exon1;Parent=MS.gene67692.t1 |
chr5.2 | CDS | 13913551 | 13913704 | 13913551 | ID=cds.MS.gene67692.t1;Parent=MS.gene67692.t1 |
chr5.2 | exon | 13912941 | 13913119 | 13912941 | ID=MS.gene67692.t1.exon2;Parent=MS.gene67692.t1 |
chr5.2 | CDS | 13912941 | 13913119 | 13912941 | ID=cds.MS.gene67692.t1;Parent=MS.gene67692.t1 |
chr5.2 | exon | 13912691 | 13912774 | 13912691 | ID=MS.gene67692.t1.exon3;Parent=MS.gene67692.t1 |
chr5.2 | CDS | 13912691 | 13912774 | 13912691 | ID=cds.MS.gene67692.t1;Parent=MS.gene67692.t1 |
chr5.2 | exon | 13912428 | 13912592 | 13912428 | ID=MS.gene67692.t1.exon4;Parent=MS.gene67692.t1 |
chr5.2 | CDS | 13912428 | 13912592 | 13912428 | ID=cds.MS.gene67692.t1;Parent=MS.gene67692.t1 |
chr5.2 | exon | 13912181 | 13912303 | 13912181 | ID=MS.gene67692.t1.exon5;Parent=MS.gene67692.t1 |
chr5.2 | CDS | 13912181 | 13912303 | 13912181 | ID=cds.MS.gene67692.t1;Parent=MS.gene67692.t1 |
Gene Sequence |
Protein sequence |