Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68075.t1 | XP_024640978.1 | 97.2 | 529 | 15 | 0 | 1 | 529 | 1 | 529 | 1.90E-291 | 1011.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68075.t1 | F4I9E1 | 31.3 | 543 | 342 | 12 | 13 | 534 | 43 | 575 | 2.2e-62 | 241.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68075.t1 | G7JXI0 | 97.2 | 529 | 15 | 0 | 1 | 529 | 1 | 529 | 1.3e-291 | 1011.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052211 | MS.gene68075 | 0.809671 | 1.69E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene68075 | 0.810552 | 1.09E-50 | -1.69E-46 |
| MS.gene054742 | MS.gene68075 | 0.804315 | 2.29E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68075.t1 | MTR_5g022380 | 97.164 | 529 | 15 | 0 | 1 | 529 | 1 | 529 | 0.0 | 1051 |
| MS.gene68075.t1 | MTR_5g022380 | 97.136 | 419 | 12 | 0 | 111 | 529 | 1 | 419 | 0.0 | 831 |
| MS.gene68075.t1 | MTR_4g073690 | 64.068 | 526 | 177 | 4 | 11 | 525 | 13 | 537 | 0.0 | 673 |
| MS.gene68075.t1 | MTR_4g073690 | 61.619 | 383 | 135 | 4 | 11 | 382 | 13 | 394 | 3.78e-161 | 464 |
| MS.gene68075.t1 | MTR_2g450710 | 36.201 | 558 | 318 | 7 | 14 | 536 | 13 | 567 | 1.47e-112 | 346 |
| MS.gene68075.t1 | MTR_4g116210 | 35.009 | 557 | 319 | 7 | 14 | 529 | 12 | 566 | 5.48e-108 | 334 |
| MS.gene68075.t1 | MTR_7g029015 | 33.910 | 578 | 319 | 7 | 12 | 531 | 14 | 586 | 7.27e-107 | 332 |
| MS.gene68075.t1 | MTR_3g099150 | 34.526 | 559 | 316 | 12 | 7 | 525 | 9 | 557 | 2.20e-100 | 314 |
| MS.gene68075.t1 | MTR_5g090570 | 34.981 | 526 | 320 | 8 | 12 | 524 | 10 | 526 | 5.28e-97 | 305 |
| MS.gene68075.t1 | MTR_2g100400 | 32.353 | 544 | 321 | 10 | 8 | 521 | 2 | 528 | 1.22e-91 | 291 |
| MS.gene68075.t1 | MTR_1g111540 | 32.130 | 554 | 338 | 9 | 8 | 529 | 21 | 568 | 4.43e-88 | 283 |
| MS.gene68075.t1 | MTR_1g059080 | 32.000 | 550 | 335 | 9 | 13 | 529 | 24 | 567 | 5.45e-88 | 283 |
| MS.gene68075.t1 | MTR_1g111510 | 32.671 | 554 | 335 | 8 | 8 | 529 | 21 | 568 | 6.46e-88 | 283 |
| MS.gene68075.t1 | MTR_1g111530 | 32.246 | 552 | 330 | 9 | 13 | 529 | 22 | 564 | 1.30e-87 | 281 |
| MS.gene68075.t1 | MTR_1g111550 | 32.734 | 556 | 335 | 9 | 13 | 536 | 25 | 573 | 1.10e-86 | 280 |
| MS.gene68075.t1 | MTR_7g102880 | 31.284 | 553 | 337 | 7 | 13 | 528 | 29 | 575 | 1.23e-85 | 277 |
| MS.gene68075.t1 | MTR_1g050550 | 31.115 | 556 | 337 | 9 | 13 | 527 | 24 | 574 | 6.71e-84 | 272 |
| MS.gene68075.t1 | MTR_7g083660 | 32.143 | 560 | 333 | 15 | 11 | 529 | 5 | 558 | 2.83e-76 | 251 |
| MS.gene68075.t1 | MTR_5g026350 | 31.449 | 566 | 335 | 14 | 11 | 528 | 5 | 565 | 7.05e-76 | 250 |
| MS.gene68075.t1 | MTR_8g071920 | 30.851 | 564 | 341 | 12 | 11 | 528 | 46 | 606 | 1.25e-71 | 240 |
| MS.gene68075.t1 | MTR_3g466040 | 30.975 | 523 | 338 | 10 | 13 | 525 | 7 | 516 | 6.64e-67 | 225 |
| MS.gene68075.t1 | MTR_3g466110 | 30.515 | 485 | 321 | 8 | 13 | 491 | 7 | 481 | 4.81e-63 | 214 |
| MS.gene68075.t1 | MTR_2g104250 | 29.052 | 327 | 171 | 8 | 236 | 536 | 12 | 303 | 1.08e-40 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68075.t1 | AT4G34950 | 61.982 | 555 | 183 | 3 | 11 | 538 | 14 | 567 | 0.0 | 713 |
| MS.gene68075.t1 | AT2G16660 | 64.436 | 523 | 179 | 2 | 10 | 525 | 11 | 533 | 0.0 | 684 |
| MS.gene68075.t1 | AT2G16660 | 62.368 | 380 | 136 | 2 | 10 | 382 | 11 | 390 | 5.54e-163 | 468 |
| MS.gene68075.t1 | AT1G80530 | 34.909 | 550 | 326 | 9 | 14 | 536 | 14 | 558 | 3.67e-110 | 339 |
| MS.gene68075.t1 | AT5G14120 | 36.684 | 567 | 307 | 6 | 8 | 525 | 11 | 574 | 1.13e-108 | 336 |
| MS.gene68075.t1 | AT3G01930 | 35.467 | 578 | 306 | 7 | 7 | 525 | 10 | 579 | 1.32e-107 | 333 |
| MS.gene68075.t1 | AT5G50520 | 34.972 | 529 | 328 | 7 | 12 | 529 | 15 | 538 | 4.35e-106 | 328 |
| MS.gene68075.t1 | AT5G50630 | 34.972 | 529 | 328 | 7 | 12 | 529 | 15 | 538 | 4.35e-106 | 328 |
| MS.gene68075.t1 | AT2G28120 | 34.935 | 541 | 321 | 6 | 8 | 522 | 12 | 547 | 1.11e-101 | 318 |
| MS.gene68075.t1 | AT2G39210 | 34.964 | 552 | 317 | 10 | 13 | 528 | 21 | 566 | 2.77e-100 | 315 |
| MS.gene68075.t1 | AT1G74780 | 33.396 | 536 | 316 | 9 | 13 | 524 | 7 | 525 | 2.19e-91 | 290 |
| MS.gene68075.t1 | AT2G34350 | 32.472 | 542 | 324 | 8 | 8 | 528 | 2 | 522 | 2.29e-88 | 282 |
| MS.gene68075.t1 | AT2G34350 | 32.472 | 542 | 324 | 8 | 8 | 528 | 2 | 522 | 2.29e-88 | 282 |
| MS.gene68075.t1 | AT1G18940 | 33.706 | 537 | 310 | 11 | 13 | 527 | 9 | 521 | 1.47e-85 | 275 |
| MS.gene68075.t1 | AT2G34355 | 31.086 | 534 | 336 | 7 | 13 | 531 | 7 | 523 | 5.84e-81 | 262 |
| MS.gene68075.t1 | AT3G01930 | 34.599 | 474 | 243 | 7 | 111 | 525 | 1 | 466 | 1.62e-77 | 252 |
| MS.gene68075.t1 | AT3G01630 | 30.147 | 544 | 338 | 12 | 12 | 528 | 22 | 550 | 2.11e-73 | 243 |
| MS.gene68075.t1 | AT3G01630 | 30.147 | 544 | 338 | 12 | 12 | 528 | 40 | 568 | 2.64e-73 | 243 |
| MS.gene68075.t1 | AT1G31470 | 31.667 | 540 | 334 | 14 | 12 | 528 | 42 | 569 | 7.24e-71 | 238 |
| MS.gene68075.t1 | AT4G19450 | 31.393 | 567 | 333 | 15 | 11 | 528 | 5 | 564 | 2.08e-70 | 236 |
| MS.gene68075.t1 | AT5G45275 | 30.265 | 565 | 340 | 13 | 11 | 528 | 5 | 562 | 1.53e-68 | 231 |
| MS.gene68075.t1 | AT3G01930 | 33.180 | 434 | 230 | 6 | 7 | 388 | 10 | 435 | 4.37e-68 | 226 |
| MS.gene68075.t1 | AT2G30300 | 30.368 | 517 | 327 | 9 | 14 | 523 | 8 | 498 | 1.33e-64 | 219 |
| MS.gene68075.t1 | AT4G19450 | 31.971 | 416 | 232 | 12 | 11 | 382 | 5 | 413 | 1.71e-56 | 195 |
| MS.gene68075.t1 | AT2G34355 | 29.049 | 389 | 252 | 6 | 150 | 531 | 2 | 373 | 8.32e-48 | 170 |
Find 107 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGGACGCATTCTTTC+TGG | 0.067041 | 5.3:-13032270 | MS.gene68075:CDS |
| ACTTCTTGTTCCTTTATATT+TGG | 0.160234 | 5.3:-13032607 | MS.gene68075:CDS |
| GAATATCCCCTCTTCCTTAT+TGG | 0.177151 | 5.3:-13033785 | MS.gene68075:CDS |
| CATGCTTGTGTATGTGATTA+TGG | 0.186967 | 5.3:-13031177 | MS.gene68075:CDS |
| CCCTTTAGAATGCCGGAAAT+TGG | 0.239061 | 5.3:+13032942 | None:intergenic |
| CATTTCATTCATAAGCATTT+GGG | 0.248417 | 5.3:-13032295 | MS.gene68075:CDS |
| ATGGCTTTCGCTTGTGTATT+GGG | 0.254616 | 5.3:-13031158 | MS.gene68075:CDS |
| AAAGATGTTGGTAAAGCTTT+TGG | 0.279837 | 5.3:-13033918 | MS.gene68075:CDS |
| TCTCAGATTCTGATGTTCTT+TGG | 0.295006 | 5.3:-13031470 | MS.gene68075:CDS |
| CTCATTCTTAACCTTCCTAT+TGG | 0.296648 | 5.3:-13031299 | MS.gene68075:CDS |
| ATAAGCATTTGGGGTTTCTT+TGG | 0.297026 | 5.3:-13032285 | MS.gene68075:CDS |
| CTATTTGGTCTCAAATACTA+TGG | 0.305461 | 5.3:-13031338 | MS.gene68075:CDS |
| GTTATGTTTACCAGCCAATA+AGG | 0.305623 | 5.3:+13033771 | None:intergenic |
| CAGGCATGCCAAGGTTAGTT+TGG | 0.310026 | 5.3:-13031502 | MS.gene68075:CDS |
| TCATTTCATTCATAAGCATT+TGG | 0.318055 | 5.3:-13032296 | MS.gene68075:CDS |
| CTCTTGGCATTTGATATCTC+TGG | 0.323684 | 5.3:-13032693 | MS.gene68075:CDS |
| GCAGCAGCTTCAGAACTATT+TGG | 0.325560 | 5.3:-13031353 | MS.gene68075:CDS |
| ATCATGGGATTCATTGGATA+TGG | 0.325941 | 5.3:-13033834 | MS.gene68075:CDS |
| AAGGAAGAGGGGATATTCTT+TGG | 0.328395 | 5.3:+13033790 | None:intergenic |
| TTACCAGGATCACTATATAT+TGG | 0.329554 | 5.3:-13031425 | MS.gene68075:CDS |
| TATGGCTTTCGCTTGTGTAT+TGG | 0.340093 | 5.3:-13031159 | MS.gene68075:CDS |
| TTTCTCTGTGGTGTTGGAAC+AGG | 0.349477 | 5.3:-13032384 | MS.gene68075:CDS |
| CAAGAAGTGGCATAGCTAAT+AGG | 0.363471 | 5.3:+13032622 | None:intergenic |
| ACTTCAGTTATTCTGATGAT+TGG | 0.363972 | 5.3:-13033861 | MS.gene68075:CDS |
| TATATTGGTTCAATCTTAGT+AGG | 0.367284 | 5.3:-13031410 | MS.gene68075:CDS |
| AATCTCAACTTCTTCTACCT+TGG | 0.372474 | 5.3:+13032488 | None:intergenic |
| GATGTGTATATTCTTGTGTA+TGG | 0.373027 | 5.3:-13033039 | MS.gene68075:CDS |
| TCATAAACATGTTATTTCAT+TGG | 0.374079 | 5.3:-13032667 | MS.gene68075:CDS |
| TTGAATACGACCAAATATAA+AGG | 0.374709 | 5.3:+13032597 | None:intergenic |
| TGAACCTTTGTTGGCACAAA+AGG | 0.386700 | 5.3:-13032538 | MS.gene68075:CDS |
| TTGTTCTAAATGCAAGAAAC+AGG | 0.408668 | 5.3:+13031123 | None:intergenic |
| ATCTTAGTAGGAATATGTTA+TGG | 0.410113 | 5.3:-13031398 | MS.gene68075:CDS |
| TCCAATTTCCGGCATTCTAA+AGG | 0.410577 | 5.3:-13032943 | MS.gene68075:CDS |
| GGTGCTATCATGGGATTCAT+TGG | 0.411021 | 5.3:-13033840 | MS.gene68075:CDS |
| ACATATTGCTTGTACCCATA+TGG | 0.411307 | 5.3:+13034031 | None:intergenic |
| AGCATTAATAGAAACTTAGA+TGG | 0.417468 | 5.3:+13032858 | None:intergenic |
| CCAATTTCCGGCATTCTAAA+GGG | 0.419855 | 5.3:-13032942 | MS.gene68075:CDS |
| TTCAATATCATAAAGGTATC+CGG | 0.421548 | 5.3:+13031250 | None:intergenic |
| GTGTCATTTCTCTGTGGTGT+TGG | 0.422085 | 5.3:-13032390 | MS.gene68075:CDS |
| ACAGGTTCATGAACCTTTGT+TGG | 0.424667 | 5.3:-13032547 | MS.gene68075:CDS |
| GATGAATAACTTGGGACAAA+TGG | 0.427374 | 5.3:-13032352 | MS.gene68075:CDS |
| AGATGTGTTAAAGTCTCTAA+TGG | 0.430909 | 5.3:-13033979 | MS.gene68075:CDS |
| ACAAAAGGTTTCAGAAGAAA+AGG | 0.433859 | 5.3:-13032523 | MS.gene68075:CDS |
| TCTGATGATTGGTGCTATCA+TGG | 0.440148 | 5.3:-13033850 | MS.gene68075:CDS |
| TACAGTAGCAGTTTATCTCT+TGG | 0.443498 | 5.3:-13032709 | MS.gene68075:CDS |
| GTGCAAGTGTTTCCGCCTCC+TGG | 0.444901 | 5.3:+13031215 | None:intergenic |
| TAGGATTTGTGACAGCCATA+TGG | 0.447435 | 5.3:-13034046 | MS.gene68075:CDS |
| CAGGTCTTGTTTCTGATCGT+TGG | 0.448059 | 5.3:-13033887 | MS.gene68075:CDS |
| ATTAAAAGAAAACCGGTGAT+AGG | 0.449467 | 5.3:-13032468 | MS.gene68075:CDS |
| GAAAAGATGAATGAACCAAT+AGG | 0.463266 | 5.3:+13031284 | None:intergenic |
| ATCCCCTCTTCCTTATTGGC+TGG | 0.463390 | 5.3:-13033781 | MS.gene68075:intron |
| ATGAATAACTTGGGACAAAT+GGG | 0.466370 | 5.3:-13032351 | MS.gene68075:CDS |
| TTCGCTTGTGTATTGGGGTG+TGG | 0.467433 | 5.3:-13031152 | MS.gene68075:CDS |
| AGAGCATACTATCATTGAAA+TGG | 0.483884 | 5.3:-13032442 | MS.gene68075:CDS |
| TAGTGGCTTCAATATCATAA+AGG | 0.484536 | 5.3:+13031243 | None:intergenic |
| TGGTTACATTGCATTGGCAA+TGG | 0.486214 | 5.3:-13031450 | MS.gene68075:CDS |
| CACTCTCTGAATACTACATC+AGG | 0.489900 | 5.3:-13032245 | MS.gene68075:intron |
| GCATTGGCAATGGCCTTACC+AGG | 0.490266 | 5.3:-13031440 | MS.gene68075:CDS |
| GAACCAATATATAGTGATCC+TGG | 0.491333 | 5.3:+13031422 | None:intergenic |
| AATGAAATAACATGTTTATG+AGG | 0.496120 | 5.3:+13032669 | None:intergenic |
| ATCATCAGAATAACTGAAGT+TGG | 0.498832 | 5.3:+13033864 | None:intergenic |
| GGAGGCGGAAACACTTGCAC+TGG | 0.501570 | 5.3:-13031212 | MS.gene68075:CDS |
| AGTTGAGATTAAAAGAAAAC+CGG | 0.502662 | 5.3:-13032475 | MS.gene68075:CDS |
| TACATAGCCCTTTAGAATGC+CGG | 0.507305 | 5.3:+13032935 | None:intergenic |
| AGGATTTGTGACAGCCATAT+GGG | 0.515315 | 5.3:-13034045 | MS.gene68075:CDS |
| GGACAAATGGGACAGGCACT+TGG | 0.515436 | 5.3:-13032339 | MS.gene68075:CDS |
| TTGTGTATTGGGGTGTGGAT+TGG | 0.519733 | 5.3:-13031147 | MS.gene68075:CDS |
| CTCTCTGTTGCTAAAGATGT+TGG | 0.521493 | 5.3:-13033930 | MS.gene68075:CDS |
| GTTCTTTGGTTACATTGCAT+TGG | 0.523788 | 5.3:-13031456 | MS.gene68075:CDS |
| AATATATAGTGATCCTGGTA+AGG | 0.541574 | 5.3:+13031427 | None:intergenic |
| ATGTGTATATTCTTGTGTAT+GGG | 0.545839 | 5.3:-13033038 | MS.gene68075:CDS |
| CTGATGATTGGTGCTATCAT+GGG | 0.547328 | 5.3:-13033849 | MS.gene68075:CDS |
| AATAGTTCTGAAGCTGCTGC+TGG | 0.557803 | 5.3:+13031356 | None:intergenic |
| AAATGAACAAAGAAACATCA+TGG | 0.557965 | 5.3:+13032313 | None:intergenic |
| GCAATGAGACAAATGATAGC+AGG | 0.561934 | 5.3:+13032825 | None:intergenic |
| CAATAGGAAGGTTAAGAATG+AGG | 0.565069 | 5.3:+13031300 | None:intergenic |
| ATTGAAGCCACTAGTGTACC+AGG | 0.566378 | 5.3:-13031233 | MS.gene68075:CDS |
| GTATGCTCTTCACCTATCAC+CGG | 0.568349 | 5.3:+13032456 | None:intergenic |
| TCAGTAGAAGTTGAAGCTGG+TGG | 0.572587 | 5.3:+13032780 | None:intergenic |
| GCCACTAGTGTACCAGGAGG+CGG | 0.573885 | 5.3:-13031227 | MS.gene68075:CDS |
| ATTTCATTCATAAGCATTTG+GGG | 0.573991 | 5.3:-13032294 | MS.gene68075:CDS |
| GCTGCATTCCAAACTAACCT+TGG | 0.574137 | 5.3:+13031494 | None:intergenic |
| TCATTGGATATGGAGCTCAA+TGG | 0.575598 | 5.3:-13033824 | MS.gene68075:CDS |
| TTTACCAGCCAATAAGGAAG+AGG | 0.577066 | 5.3:+13033777 | None:intergenic |
| GGCATTCTAAAGGGCTATGT+AGG | 0.579833 | 5.3:-13032933 | MS.gene68075:CDS |
| AAGCTGGTGGAGTTTCATGA+AGG | 0.580336 | 5.3:+13032793 | None:intergenic |
| TCCGCCTCCTGGTACACTAG+TGG | 0.580549 | 5.3:+13031226 | None:intergenic |
| AAATATAAAGGAACAAGAAG+TGG | 0.584319 | 5.3:+13032609 | None:intergenic |
| ATATGGGTACAAGCAATATG+TGG | 0.584975 | 5.3:-13034029 | MS.gene68075:CDS |
| GAGATAAACTGCTACTGTAA+CGG | 0.588613 | 5.3:+13032713 | None:intergenic |
| TGGCTTTCGCTTGTGTATTG+GGG | 0.591806 | 5.3:-13031157 | MS.gene68075:CDS |
| TCTTCAGTAGAAGTTGAAGC+TGG | 0.593843 | 5.3:+13032777 | None:intergenic |
| TGTATATTCTTGTGTATGGG+TGG | 0.598397 | 5.3:-13033035 | MS.gene68075:CDS |
| TAACTTGGGACAAATGGGAC+AGG | 0.599118 | 5.3:-13032346 | MS.gene68075:CDS |
| TTACCAGCCAATAAGGAAGA+GGG | 0.606426 | 5.3:+13033778 | None:intergenic |
| TAGAAACTTAGATGGGTCTG+AGG | 0.614102 | 5.3:+13032866 | None:intergenic |
| GCAGAAAATCAGGCATGCCA+AGG | 0.615589 | 5.3:-13031511 | MS.gene68075:intron |
| AGATGAATGAACCAATAGGA+AGG | 0.629288 | 5.3:+13031288 | None:intergenic |
| TTGTTTGTGTCATTTCTCTG+TGG | 0.636758 | 5.3:-13032396 | MS.gene68075:CDS |
| GCATTAATAGAAACTTAGAT+GGG | 0.651110 | 5.3:+13032859 | None:intergenic |
| ACTATGTGTGATGAATAACT+TGG | 0.651334 | 5.3:-13032361 | MS.gene68075:CDS |
| TACCAGCCAATAAGGAAGAG+GGG | 0.660022 | 5.3:+13033779 | None:intergenic |
| AAAGGAAGAGACATGCACCA+AGG | 0.681779 | 5.3:-13032505 | MS.gene68075:CDS |
| CTATGTGTGATGAATAACTT+GGG | 0.685471 | 5.3:-13032360 | MS.gene68075:CDS |
| TGGGTGGAAACAGCACAACA+TGG | 0.685598 | 5.3:-13033019 | MS.gene68075:CDS |
| GAATGCCGGAAATTGGACCA+CGG | 0.691049 | 5.3:+13032949 | None:intergenic |
| GAAGCCACTAGTGTACCAGG+AGG | 0.777264 | 5.3:-13031230 | MS.gene68075:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAAAGTGAAATTCT+TGG | + | chr5.3:13031930-13031949 | None:intergenic | 15.0% |
| !! | CATATAAAATTAAACATTCA+AGG | + | chr5.3:13033616-13033635 | None:intergenic | 15.0% |
| !!! | CTTGAATGTTTAATTTTATA+TGG | - | chr5.3:13033614-13033633 | MS.gene68075:intron | 15.0% |
| !!! | TAAACATAGTTTTAAGAAAA+AGG | - | chr5.3:13032988-13033007 | MS.gene68075:CDS | 15.0% |
| !! | AAATCAAATAGTCATGTATA+TGG | + | chr5.3:13032961-13032980 | None:intergenic | 20.0% |
| !! | AATCAAATAGTCATGTATAT+GGG | + | chr5.3:13032960-13032979 | None:intergenic | 20.0% |
| !! | AATGAAATAACATGTTTATG+AGG | + | chr5.3:13032481-13032500 | None:intergenic | 20.0% |
| !! | ACCAATTTATTTGATTACTT+TGG | - | chr5.3:13032073-13032092 | MS.gene68075:intron | 20.0% |
| !! | ATTGATTATTTGCAATGTAA+AGG | - | chr5.3:13033088-13033107 | MS.gene68075:intron | 20.0% |
| !! | GCTGTTATTAACATATAATT+AGG | - | chr5.3:13033316-13033335 | MS.gene68075:intron | 20.0% |
| !! | TCCAAAGTAATCAAATAAAT+TGG | + | chr5.3:13032077-13032096 | None:intergenic | 20.0% |
| !! | TTGATTGTAAGTTTATAACT+AGG | - | chr5.3:13033541-13033560 | MS.gene68075:intron | 20.0% |
| !!! | ACAATCAAGATTTTAAAATG+TGG | + | chr5.3:13033529-13033548 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTATATTTAGAC+AGG | - | chr5.3:13032015-13032034 | MS.gene68075:intron | 20.0% |
| !!! | ATTTGGTTAAGTTCTATTTT+TGG | - | chr5.3:13033481-13033500 | MS.gene68075:intron | 20.0% |
| !!! | TCATAAACATGTTATTTCAT+TGG | - | chr5.3:13032480-13032499 | MS.gene68075:CDS | 20.0% |
| !!! | TTAAGTTGTATATTTAGACA+GGG | - | chr5.3:13032016-13032035 | MS.gene68075:intron | 20.0% |
| !!! | TTTTTCTTCTTCTTTCTATT+TGG | - | chr5.3:13033464-13033483 | MS.gene68075:intron | 20.0% |
| ! | AAAAGATTGTGAAACTGTTT+GGG | - | chr5.3:13031840-13031859 | MS.gene68075:intron | 25.0% |
| ! | AAAATCTTAACTCATAGATC+AGG | + | chr5.3:13033023-13033042 | None:intergenic | 25.0% |
| ! | AAACAAGCCTAAAAATTATC+AGG | + | chr5.3:13031788-13031807 | None:intergenic | 25.0% |
| ! | AAATATAAAGGAACAAGAAG+TGG | + | chr5.3:13032541-13032560 | None:intergenic | 25.0% |
| ! | AAATCTTAACTCATAGATCA+GGG | + | chr5.3:13033022-13033041 | None:intergenic | 25.0% |
| ! | AAATGAACAAAGAAACATCA+TGG | + | chr5.3:13032837-13032856 | None:intergenic | 25.0% |
| ! | AACAAGCCTAAAAATTATCA+GGG | + | chr5.3:13031787-13031806 | None:intergenic | 25.0% |
| ! | ACTGTTTAAAAAAACCAAAC+CGG | - | chr5.3:13033368-13033387 | MS.gene68075:intron | 25.0% |
| ! | ACTTCTTGTTCCTTTATATT+TGG | - | chr5.3:13032540-13032559 | MS.gene68075:CDS | 25.0% |
| ! | AGCATTAATAGAAACTTAGA+TGG | + | chr5.3:13032292-13032311 | None:intergenic | 25.0% |
| ! | AGTTGAGATTAAAAGAAAAC+CGG | - | chr5.3:13032672-13032691 | MS.gene68075:CDS | 25.0% |
| ! | ATCTTAGTAGGAATATGTTA+TGG | - | chr5.3:13033749-13033768 | MS.gene68075:intron | 25.0% |
| ! | ATGTGTATATTCTTGTGTAT+GGG | - | chr5.3:13032109-13032128 | MS.gene68075:intron | 25.0% |
| ! | ATTTCATTCATAAGCATTTG+GGG | - | chr5.3:13032853-13032872 | MS.gene68075:CDS | 25.0% |
| ! | CATTTCATTCATAAGCATTT+GGG | - | chr5.3:13032852-13032871 | MS.gene68075:CDS | 25.0% |
| ! | CTTTACACTACTATAATCTT+TGG | + | chr5.3:13031654-13031673 | None:intergenic | 25.0% |
| ! | GCATTAATAGAAACTTAGAT+GGG | + | chr5.3:13032291-13032310 | None:intergenic | 25.0% |
| ! | TAAAAGATTGTGAAACTGTT+TGG | - | chr5.3:13031839-13031858 | MS.gene68075:intron | 25.0% |
| ! | TCATTTCATTCATAAGCATT+TGG | - | chr5.3:13032851-13032870 | MS.gene68075:CDS | 25.0% |
| ! | TGTAAGTTTATAACTAGGAA+GGG | - | chr5.3:13033546-13033565 | MS.gene68075:intron | 25.0% |
| ! | TTGAATACGACCAAATATAA+AGG | + | chr5.3:13032553-13032572 | None:intergenic | 25.0% |
| ! | TTGTAAGTTTATAACTAGGA+AGG | - | chr5.3:13033545-13033564 | MS.gene68075:intron | 25.0% |
| !! | AAAGCTTTTGGTATTTTATC+AGG | - | chr5.3:13031241-13031260 | MS.gene68075:CDS | 25.0% |
| !! | AGATTTTTCTCTATGTATCT+TGG | + | chr5.3:13034062-13034081 | None:intergenic | 25.0% |
| !! | ATAATTTTGCAGCTGAAAAA+TGG | - | chr5.3:13031077-13031096 | MS.gene68075:CDS | 25.0% |
| !! | ATTTTATATGGCAGAAAATC+AGG | - | chr5.3:13033626-13033645 | MS.gene68075:intron | 25.0% |
| !!! | ATGAATACAACATTTTGAGA+AGG | - | chr5.3:13032045-13032064 | MS.gene68075:intron | 25.0% |
| !!! | TATATTGGTTCAATCTTAGT+AGG | - | chr5.3:13033737-13033756 | MS.gene68075:intron | 25.0% |
| !!! | TGATAATTTTTAGGCTTGTT+TGG | - | chr5.3:13031787-13031806 | MS.gene68075:intron | 25.0% |
| !!! | TTCAATATCATAAAGGTATC+CGG | + | chr5.3:13033900-13033919 | None:intergenic | 25.0% |
| !!! | TTCTTTTTTGTTTAACTCTC+TGG | - | chr5.3:13031744-13031763 | MS.gene68075:intron | 25.0% |
| !!! | TTGGTTTTTTTAATAGTCCT+AGG | - | chr5.3:13033500-13033519 | MS.gene68075:intron | 25.0% |
| AATATATAGTGATCCTGGTA+AGG | + | chr5.3:13033723-13033742 | None:intergenic | 30.0% | |
| AATGAACTGAAAACAGCTTA+TGG | + | chr5.3:13031895-13031914 | None:intergenic | 30.0% | |
| ACAAAAGGTTTCAGAAGAAA+AGG | - | chr5.3:13032624-13032643 | MS.gene68075:CDS | 30.0% | |
| ACTATGTGTGATGAATAACT+TGG | - | chr5.3:13032786-13032805 | MS.gene68075:CDS | 30.0% | |
| ACTTCAGTTATTCTGATGAT+TGG | - | chr5.3:13031286-13031305 | MS.gene68075:CDS | 30.0% | |
| AGAGCATACTATCATTGAAA+TGG | - | chr5.3:13032705-13032724 | MS.gene68075:CDS | 30.0% | |
| AGATGTGTTAAAGTCTCTAA+TGG | - | chr5.3:13031168-13031187 | MS.gene68075:CDS | 30.0% | |
| ATCATCAGAATAACTGAAGT+TGG | + | chr5.3:13031286-13031305 | None:intergenic | 30.0% | |
| ATGAATAACTTGGGACAAAT+GGG | - | chr5.3:13032796-13032815 | MS.gene68075:CDS | 30.0% | |
| ATTAAAAGAAAACCGGTGAT+AGG | - | chr5.3:13032679-13032698 | MS.gene68075:CDS | 30.0% | |
| ATTGAATTGTCATGAACTCT+CGG | - | chr5.3:13033435-13033454 | MS.gene68075:intron | 30.0% | |
| CAAAACCTTTAACACAAGTT+AGG | + | chr5.3:13033200-13033219 | None:intergenic | 30.0% | |
| CTATGTGTGATGAATAACTT+GGG | - | chr5.3:13032787-13032806 | MS.gene68075:CDS | 30.0% | |
| CTATTTGGTCTCAAATACTA+TGG | - | chr5.3:13033809-13033828 | MS.gene68075:CDS | 30.0% | |
| GAAAAGATGAATGAACCAAT+AGG | + | chr5.3:13033866-13033885 | None:intergenic | 30.0% | |
| GAGTTCATGACAATTCAATT+CGG | + | chr5.3:13033434-13033453 | None:intergenic | 30.0% | |
| GATGTGTATATTCTTGTGTA+TGG | - | chr5.3:13032108-13032127 | MS.gene68075:intron | 30.0% | |
| TAGTGGCTTCAATATCATAA+AGG | + | chr5.3:13033907-13033926 | None:intergenic | 30.0% | |
| TGAAATTCTTGGAGAGTTTA+TGG | + | chr5.3:13031919-13031938 | None:intergenic | 30.0% | |
| TTACCAGGATCACTATATAT+TGG | - | chr5.3:13033722-13033741 | MS.gene68075:intron | 30.0% | |
| TTAGTTCGATTCAGAACTAT+AGG | + | chr5.3:13033232-13033251 | None:intergenic | 30.0% | |
| ! | AACGAACCCTGATAATTTTT+AGG | - | chr5.3:13031778-13031797 | MS.gene68075:intron | 30.0% |
| ! | TGTTTTTCTTTGTCAACACT+AGG | + | chr5.3:13032583-13032602 | None:intergenic | 30.0% |
| ! | TTGTTCTAAATGCAAGAAAC+AGG | + | chr5.3:13034027-13034046 | None:intergenic | 30.0% |
| !! | AAAGATGTTGGTAAAGCTTT+TGG | - | chr5.3:13031229-13031248 | MS.gene68075:CDS | 30.0% |
| !! | AACTACACATAGTTGACTTT+TGG | + | chr5.3:13031726-13031745 | None:intergenic | 30.0% |
| !! | ATTGGTTCATTCATCTTTTC+TGG | - | chr5.3:13033866-13033885 | MS.gene68075:CDS | 30.0% |
| !! | TAGTGTTGACAAAGAAAAAC+AGG | - | chr5.3:13032582-13032601 | MS.gene68075:CDS | 30.0% |
| !!! | ATTTCATTGGTTTTCACAGT+AGG | - | chr5.3:13032493-13032512 | MS.gene68075:CDS | 30.0% |
| !!! | GGTGAAAACTGTTGATTTTT+GGG | - | chr5.3:13032726-13032745 | MS.gene68075:CDS | 30.0% |
| !!! | TGGTGAAAACTGTTGATTTT+TGG | - | chr5.3:13032725-13032744 | MS.gene68075:CDS | 30.0% |
| AATCTCAACTTCTTCTACCT+TGG | + | chr5.3:13032662-13032681 | None:intergenic | 35.0% | |
| ACATATTGCTTGTACCCATA+TGG | + | chr5.3:13031119-13031138 | None:intergenic | 35.0% | |
| AGAAACTTTCCAAAAAACCG+TGG | - | chr5.3:13032181-13032200 | MS.gene68075:intron | 35.0% | |
| AGATGAATGAACCAATAGGA+AGG | + | chr5.3:13033862-13033881 | None:intergenic | 35.0% | |
| ATATGGGTACAAGCAATATG+TGG | - | chr5.3:13031118-13031137 | MS.gene68075:CDS | 35.0% | |
| ATCATGGGATTCATTGGATA+TGG | - | chr5.3:13031313-13031332 | MS.gene68075:CDS | 35.0% | |
| ATGAACTATCCATCACAGTT+TGG | + | chr5.3:13033399-13033418 | None:intergenic | 35.0% | |
| ATGCAACTCTGCCTTTAAAT+GGG | + | chr5.3:13031609-13031628 | None:intergenic | 35.0% | |
| CAAGAATCGATTAATCCGAA+GGG | - | chr5.3:13031554-13031573 | MS.gene68075:intron | 35.0% | |
| CAATAGGAAGGTTAAGAATG+AGG | + | chr5.3:13033850-13033869 | None:intergenic | 35.0% | |
| CATGCTTGTGTATGTGATTA+TGG | - | chr5.3:13033970-13033989 | MS.gene68075:CDS | 35.0% | |
| CTCATTCTTAACCTTCCTAT+TGG | - | chr5.3:13033848-13033867 | MS.gene68075:CDS | 35.0% | |
| GAACCAATATATAGTGATCC+TGG | + | chr5.3:13033728-13033747 | None:intergenic | 35.0% | |
| GAGATAAACTGCTACTGTAA+CGG | + | chr5.3:13032437-13032456 | None:intergenic | 35.0% | |
| GATGAATAACTTGGGACAAA+TGG | - | chr5.3:13032795-13032814 | MS.gene68075:CDS | 35.0% | |
| GTTATGTTTACCAGCCAATA+AGG | + | chr5.3:13031379-13031398 | None:intergenic | 35.0% | |
| GTTCTTTGGTTACATTGCAT+TGG | - | chr5.3:13033691-13033710 | MS.gene68075:intron | 35.0% | |
| TACAGTAGCAGTTTATCTCT+TGG | - | chr5.3:13032438-13032457 | MS.gene68075:CDS | 35.0% | |
| TATGCAACTCTGCCTTTAAA+TGG | + | chr5.3:13031610-13031629 | None:intergenic | 35.0% | |
| TCTCAGATTCTGATGTTCTT+TGG | - | chr5.3:13033677-13033696 | MS.gene68075:intron | 35.0% | |
| TGAACAAACAGCAATGACTA+GGG | + | chr5.3:13032934-13032953 | None:intergenic | 35.0% | |
| TGTATATTCTTGTGTATGGG+TGG | - | chr5.3:13032112-13032131 | MS.gene68075:intron | 35.0% | |
| TGTATATTTAGACAGGGTGT+TGG | - | chr5.3:13032022-13032041 | MS.gene68075:intron | 35.0% | |
| TGTCAATGCAATGACAGTTT+AGG | - | chr5.3:13033045-13033064 | MS.gene68075:intron | 35.0% | |
| TTGAACAAACAGCAATGACT+AGG | + | chr5.3:13032935-13032954 | None:intergenic | 35.0% | |
| ! | ATAAGCATTTGGGGTTTCTT+TGG | - | chr5.3:13032862-13032881 | MS.gene68075:CDS | 35.0% |
| ! | CTGAACCTAACTTGTGTTAA+AGG | - | chr5.3:13033192-13033211 | MS.gene68075:intron | 35.0% |
| ! | TACACAACGTGATTTGTGAA+TGG | + | chr5.3:13031496-13031515 | None:intergenic | 35.0% |
| !! | TTGTTTGTGTCATTTCTCTG+TGG | - | chr5.3:13032751-13032770 | MS.gene68075:CDS | 35.0% |
| !!! | ATTTTAAAATGTGGTCGCCT+AGG | + | chr5.3:13033520-13033539 | None:intergenic | 35.0% |
| AAAAACCGTGGTCCAATTTC+CGG | - | chr5.3:13032193-13032212 | MS.gene68075:intron | 40.0% | |
| AAACTGTTTGGGAGAGCTTA+GGG | - | chr5.3:13031851-13031870 | MS.gene68075:intron | 40.0% | |
| AAGGAAGAGGGGATATTCTT+TGG | + | chr5.3:13031360-13031379 | None:intergenic | 40.0% | |
| ACAGGTTCATGAACCTTTGT+TGG | - | chr5.3:13032600-13032619 | MS.gene68075:CDS | 40.0% | |
| AGGATTTGTGACAGCCATAT+GGG | - | chr5.3:13031102-13031121 | MS.gene68075:CDS | 40.0% | |
| ATGGCTTTCGCTTGTGTATT+GGG | - | chr5.3:13033989-13034008 | MS.gene68075:CDS | 40.0% | |
| CAAGAAGTGGCATAGCTAAT+AGG | + | chr5.3:13032528-13032547 | None:intergenic | 40.0% | |
| CACTAGGACTGTTTATGGTT+CGG | - | chr5.3:13033119-13033138 | MS.gene68075:intron | 40.0% | |
| CACTCTCTGAATACTACATC+AGG | - | chr5.3:13032902-13032921 | MS.gene68075:CDS | 40.0% | |
| CCAAGAATCGATTAATCCGA+AGG | - | chr5.3:13031553-13031572 | MS.gene68075:intron | 40.0% | |
| CCAATTTCCGGCATTCTAAA+GGG | - | chr5.3:13032205-13032224 | MS.gene68075:intron | 40.0% | |
| CTCTCTGTTGCTAAAGATGT+TGG | - | chr5.3:13031217-13031236 | MS.gene68075:CDS | 40.0% | |
| CTCTTGGCATTTGATATCTC+TGG | - | chr5.3:13032454-13032473 | MS.gene68075:CDS | 40.0% | |
| GAATATCCCCTCTTCCTTAT+TGG | - | chr5.3:13031362-13031381 | MS.gene68075:CDS | 40.0% | |
| GCAATGAGACAAATGATAGC+AGG | + | chr5.3:13032325-13032344 | None:intergenic | 40.0% | |
| TAGAAACTTAGATGGGTCTG+AGG | + | chr5.3:13032284-13032303 | None:intergenic | 40.0% | |
| TAGGATTTGTGACAGCCATA+TGG | - | chr5.3:13031101-13031120 | MS.gene68075:CDS | 40.0% | |
| TATGGCTTTCGCTTGTGTAT+TGG | - | chr5.3:13033988-13034007 | MS.gene68075:CDS | 40.0% | |
| TCATTGGATATGGAGCTCAA+TGG | - | chr5.3:13031323-13031342 | MS.gene68075:CDS | 40.0% | |
| TCCAATTTCCGGCATTCTAA+AGG | - | chr5.3:13032204-13032223 | MS.gene68075:intron | 40.0% | |
| TCTTCAGTAGAAGTTGAAGC+TGG | + | chr5.3:13032373-13032392 | None:intergenic | 40.0% | |
| TGAACCTTTGTTGGCACAAA+AGG | - | chr5.3:13032609-13032628 | MS.gene68075:CDS | 40.0% | |
| TGCAACTCTGCCTTTAAATG+GGG | + | chr5.3:13031608-13031627 | None:intergenic | 40.0% | |
| TTACCAGCCAATAAGGAAGA+GGG | + | chr5.3:13031372-13031391 | None:intergenic | 40.0% | |
| TTCTTTGGACGCATTCTTTC+TGG | - | chr5.3:13032877-13032896 | MS.gene68075:CDS | 40.0% | |
| TTTACCAGCCAATAAGGAAG+AGG | + | chr5.3:13031373-13031392 | None:intergenic | 40.0% | |
| TTTGCAGCTGAAAAATGGCT+AGG | - | chr5.3:13031082-13031101 | MS.gene68075:CDS | 40.0% | |
| ! | CCTTCGGATTAATCGATTCT+TGG | + | chr5.3:13031556-13031575 | None:intergenic | 40.0% |
| ! | GAAACCTTTTGTGCCAACAA+AGG | + | chr5.3:13032616-13032635 | None:intergenic | 40.0% |
| ! | GTTTAACTCTCTGGTTCCTA+AGG | - | chr5.3:13031753-13031772 | MS.gene68075:intron | 40.0% |
| ! | TATCAGGGTTCGTTTTCCTT+AGG | + | chr5.3:13031772-13031791 | None:intergenic | 40.0% |
| ! | TGGTTACATTGCATTGGCAA+TGG | - | chr5.3:13033697-13033716 | MS.gene68075:intron | 40.0% |
| !! | ATCTTTTCTGGTCTCATTGC+CGG | - | chr5.3:13033878-13033897 | MS.gene68075:CDS | 40.0% |
| !! | CTGATGATTGGTGCTATCAT+GGG | - | chr5.3:13031298-13031317 | MS.gene68075:CDS | 40.0% |
| !! | GTTTATGGTTCGGTTCAAGA+AGG | - | chr5.3:13033129-13033148 | MS.gene68075:intron | 40.0% |
| !! | TACATAGCCCTTTAGAATGC+CGG | + | chr5.3:13032215-13032234 | None:intergenic | 40.0% |
| !! | TCTGATGATTGGTGCTATCA+TGG | - | chr5.3:13031297-13031316 | MS.gene68075:CDS | 40.0% |
| !!! | GAAATTGGACCACGGTTTTT+TGG | + | chr5.3:13032193-13032212 | None:intergenic | 40.0% |
| AAAGGAAGAGACATGCACCA+AGG | - | chr5.3:13032642-13032661 | MS.gene68075:CDS | 45.0% | |
| AAGCTGGTGGAGTTTCATGA+AGG | + | chr5.3:13032357-13032376 | None:intergenic | 45.0% | |
| ATTGAAGCCACTAGTGTACC+AGG | - | chr5.3:13033914-13033933 | MS.gene68075:CDS | 45.0% | |
| CGAACCATAAACAGTCCTAG+TGG | + | chr5.3:13033121-13033140 | None:intergenic | 45.0% | |
| GAAACTGTTTGGGAGAGCTT+AGG | - | chr5.3:13031850-13031869 | MS.gene68075:intron | 45.0% | |
| GCAGCAGCTTCAGAACTATT+TGG | - | chr5.3:13033794-13033813 | MS.gene68075:CDS | 45.0% | |
| GCTGCATTCCAAACTAACCT+TGG | + | chr5.3:13033656-13033675 | None:intergenic | 45.0% | |
| GTATGCTCTTCACCTATCAC+CGG | + | chr5.3:13032694-13032713 | None:intergenic | 45.0% | |
| TAACTTGGGACAAATGGGAC+AGG | - | chr5.3:13032801-13032820 | MS.gene68075:CDS | 45.0% | |
| TACCAGCCAATAAGGAAGAG+GGG | + | chr5.3:13031371-13031390 | None:intergenic | 45.0% | |
| TCAGTAGAAGTTGAAGCTGG+TGG | + | chr5.3:13032370-13032389 | None:intergenic | 45.0% | |
| TGGCTTTCGCTTGTGTATTG+GGG | - | chr5.3:13033990-13034009 | MS.gene68075:CDS | 45.0% | |
| TTGTGTATTGGGGTGTGGAT+TGG | - | chr5.3:13034000-13034019 | MS.gene68075:CDS | 45.0% | |
| ! | CAACGTGATTTGTGAATGGC+AGG | + | chr5.3:13031492-13031511 | None:intergenic | 45.0% |
| ! | GGCATTCTAAAGGGCTATGT+AGG | - | chr5.3:13032214-13032233 | MS.gene68075:intron | 45.0% |
| ! | GGTGCTATCATGGGATTCAT+TGG | - | chr5.3:13031307-13031326 | MS.gene68075:CDS | 45.0% |
| ! | TTTCTCTGTGGTGTTGGAAC+AGG | - | chr5.3:13032763-13032782 | MS.gene68075:CDS | 45.0% |
| !! | AATAGTTCTGAAGCTGCTGC+TGG | + | chr5.3:13033794-13033813 | None:intergenic | 45.0% |
| !! | ACAGTTTGGTTCTTCCGGTT+TGG | + | chr5.3:13033385-13033404 | None:intergenic | 45.0% |
| !! | CAGGTCTTGTTTCTGATCGT+TGG | - | chr5.3:13031260-13031279 | MS.gene68075:CDS | 45.0% |
| !! | CCATCACAGTTTGGTTCTTC+CGG | + | chr5.3:13033390-13033409 | None:intergenic | 45.0% |
| !! | CCCTTTAGAATGCCGGAAAT+TGG | + | chr5.3:13032208-13032227 | None:intergenic | 45.0% |
| !! | GTGTCATTTCTCTGTGGTGT+TGG | - | chr5.3:13032757-13032776 | MS.gene68075:CDS | 45.0% |
| !!! | ATTTTTTTTTTTTTAAAACT+CGG | - | chr5.3:13031522-13031541 | MS.gene68075:intron | 5.0% |
| ATCCCCTCTTCCTTATTGGC+TGG | - | chr5.3:13031366-13031385 | MS.gene68075:CDS | 50.0% | |
| CCGGAAGAACCAAACTGTGA+TGG | - | chr5.3:13033387-13033406 | MS.gene68075:intron | 50.0% | |
| GAATGCCGGAAATTGGACCA+CGG | + | chr5.3:13032201-13032220 | None:intergenic | 50.0% | |
| GCAGAAAATCAGGCATGCCA+AGG | - | chr5.3:13033636-13033655 | MS.gene68075:intron | 50.0% | |
| GCGACCACTAGGACTGTTTA+TGG | - | chr5.3:13033114-13033133 | MS.gene68075:intron | 50.0% | |
| TGGGTGGAAACAGCACAACA+TGG | - | chr5.3:13032128-13032147 | MS.gene68075:intron | 50.0% | |
| TGTAAAGGATCGCGACCACT+AGG | - | chr5.3:13033103-13033122 | MS.gene68075:intron | 50.0% | |
| TTCGCTTGTGTATTGGGGTG+TGG | - | chr5.3:13033995-13034014 | MS.gene68075:CDS | 50.0% | |
| TTGTGAGGGGCCCCATTTAA+AGG | - | chr5.3:13031595-13031614 | MS.gene68075:intron | 50.0% | |
| ! | CAGGCATGCCAAGGTTAGTT+TGG | - | chr5.3:13033645-13033664 | MS.gene68075:intron | 50.0% |
| AATCCCACCGTCCACTTGTG+AGG | - | chr5.3:13031580-13031599 | MS.gene68075:intron | 55.0% | |
| ATCCCACCGTCCACTTGTGA+GGG | - | chr5.3:13031581-13031600 | MS.gene68075:intron | 55.0% | |
| GAAGCCACTAGTGTACCAGG+AGG | - | chr5.3:13033917-13033936 | MS.gene68075:CDS | 55.0% | |
| GGACAAATGGGACAGGCACT+TGG | - | chr5.3:13032808-13032827 | MS.gene68075:CDS | 55.0% | |
| TAAATGGGGCCCCTCACAAG+TGG | + | chr5.3:13031594-13031613 | None:intergenic | 55.0% | |
| TCACAAGTGGACGGTGGGAT+TGG | + | chr5.3:13031581-13031600 | None:intergenic | 55.0% | |
| ! | GCATTGGCAATGGCCTTACC+AGG | - | chr5.3:13033707-13033726 | MS.gene68075:intron | 55.0% |
| GCCACTAGTGTACCAGGAGG+CGG | - | chr5.3:13033920-13033939 | MS.gene68075:CDS | 60.0% | |
| GGAGGCGGAAACACTTGCAC+TGG | - | chr5.3:13033935-13033954 | MS.gene68075:CDS | 60.0% | |
| GTGCAAGTGTTTCCGCCTCC+TGG | + | chr5.3:13033935-13033954 | None:intergenic | 60.0% | |
| TCCCACCGTCCACTTGTGAG+GGG | - | chr5.3:13031582-13031601 | MS.gene68075:intron | 60.0% | |
| TCCGCCTCCTGGTACACTAG+TGG | + | chr5.3:13033924-13033943 | None:intergenic | 60.0% | |
| !! | GACGGTGGGATTGGTCCCTT+CGG | + | chr5.3:13031572-13031591 | None:intergenic | 60.0% |
| GCCCCTCACAAGTGGACGGT+GGG | + | chr5.3:13031586-13031605 | None:intergenic | 65.0% | |
| TGGGGCCCCTCACAAGTGGA+CGG | + | chr5.3:13031590-13031609 | None:intergenic | 65.0% | |
| GGCCCCTCACAAGTGGACGG+TGG | + | chr5.3:13031587-13031606 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 13031058 | 13034111 | 13031058 | ID=MS.gene68075 |
| chr5.3 | mRNA | 13031058 | 13034111 | 13031058 | ID=MS.gene68075.t1;Parent=MS.gene68075 |
| chr5.3 | exon | 13033782 | 13034111 | 13033782 | ID=MS.gene68075.t1.exon1;Parent=MS.gene68075.t1 |
| chr5.3 | CDS | 13033782 | 13034111 | 13033782 | ID=cds.MS.gene68075.t1;Parent=MS.gene68075.t1 |
| chr5.3 | exon | 13032246 | 13033060 | 13032246 | ID=MS.gene68075.t1.exon2;Parent=MS.gene68075.t1 |
| chr5.3 | CDS | 13032246 | 13033060 | 13032246 | ID=cds.MS.gene68075.t1;Parent=MS.gene68075.t1 |
| chr5.3 | exon | 13031058 | 13031529 | 13031058 | ID=MS.gene68075.t1.exon3;Parent=MS.gene68075.t1 |
| chr5.3 | CDS | 13031058 | 13031529 | 13031058 | ID=cds.MS.gene68075.t1;Parent=MS.gene68075.t1 |
| Gene Sequence |
| Protein sequence |
