AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68706

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68706.t1 MTR_2g450070 90.698 688 60 2 3 689 4 688 0.0 1257
MS.gene68706.t1 MTR_2g450070 90.526 665 59 2 3 666 4 665 0.0 1205
MS.gene68706.t1 MTR_4g131570 43.161 658 296 13 1 651 1 587 4.80e-145 436
MS.gene68706.t1 MTR_4g131580 42.478 678 304 17 1 667 1 603 6.02e-141 426
MS.gene68706.t1 MTR_3g106220 39.769 694 339 15 15 686 6 642 3.25e-137 417
MS.gene68706.t1 MTR_4g131600 40.971 659 290 17 8 651 7 581 4.24e-129 394
MS.gene68706.t1 MTR_1g013170 43.852 488 222 10 15 496 3 444 3.42e-113 350
MS.gene68706.t1 MTR_1g013180 52.679 336 138 6 15 345 154 473 2.63e-99 320
MS.gene68706.t1 MTR_7g117705 49.057 371 126 11 15 384 3 311 1.48e-94 300
MS.gene68706.t1 MTR_4g121020 45.526 380 174 7 15 382 29 387 3.21e-90 296
MS.gene68706.t1 MTR_4g121020 45.526 380 174 7 15 382 29 387 4.39e-90 295
MS.gene68706.t1 MTR_1g032570 49.508 305 137 5 17 317 11 302 9.64e-86 282
MS.gene68706.t1 MTR_2g034960 42.896 366 173 8 13 375 25 357 3.06e-84 278
MS.gene68706.t1 MTR_8g079940 52.692 260 107 3 14 272 22 266 4.79e-80 265
MS.gene68706.t1 MTR_3g086100 54.086 257 104 3 17 272 13 256 5.11e-79 263
MS.gene68706.t1 MTR_1g032570 50.000 246 106 5 76 317 1 233 3.72e-64 223
MS.gene68706.t1 MTR_3g086100 53.535 198 78 3 76 272 1 185 2.03e-54 194
MS.gene68706.t1 MTR_3g102600 65.909 132 45 0 11 142 2 133 1.31e-53 182
MS.gene68706.t1 MTR_3g102600 62.264 53 20 0 214 266 131 183 2.70e-16 78.2
MS.gene68706.t1 MTR_3g102600 65.909 132 45 0 11 142 2 133 1.78e-52 181
MS.gene68706.t1 MTR_3g102600 43.902 123 36 2 214 336 131 220 2.55e-24 102
MS.gene68706.t1 MTR_4g121020 40.134 299 146 7 96 382 6 283 8.75e-49 181
MS.gene68706.t1 MTR_4g021760 36.822 258 123 4 17 274 11 228 4.30e-47 169
MS.gene68706.t1 MTR_4g021790 34.630 257 128 4 17 273 10 226 1.94e-43 158
MS.gene68706.t1 MTR_1g013160 52.500 160 64 2 79 238 1 148 3.33e-43 153
MS.gene68706.t1 MTR_4g021855 33.463 257 131 4 17 273 10 226 5.48e-43 157
MS.gene68706.t1 MTR_3g102590 64.615 130 45 1 15 143 6 135 4.83e-41 150
MS.gene68706.t1 MTR_3g102590 61.905 84 26 2 206 283 134 217 1.34e-23 100
MS.gene68706.t1 MTR_4g021845 34.274 248 123 4 17 264 10 217 5.62e-41 149
MS.gene68706.t1 MTR_3g102590 63.433 134 48 1 11 143 2 135 5.46e-40 145
MS.gene68706.t1 MTR_3g102590 67.797 59 19 0 206 264 134 192 2.00e-18 84.3
MS.gene68706.t1 MTR_0450s0040 33.068 251 135 2 21 271 8 225 1.75e-39 149
MS.gene68706.t1 MTR_3g102600 70.238 84 25 0 59 142 1 84 8.45e-36 132
MS.gene68706.t1 MTR_3g102600 62.264 53 20 0 214 266 82 134 8.12e-17 78.2
MS.gene68706.t1 MTR_6g045327 32.331 266 138 5 11 275 8 232 4.37e-35 137
MS.gene68706.t1 MTR_7g026400 34.454 238 126 4 47 284 17 224 6.16e-35 140
MS.gene68706.t1 MTR_8g105600 32.824 262 154 4 17 277 9 249 1.26e-34 139
MS.gene68706.t1 MTR_3g102600 70.238 84 25 0 59 142 1 84 1.67e-34 129
MS.gene68706.t1 MTR_3g102600 43.902 123 36 2 214 336 82 171 4.04e-24 100
MS.gene68706.t1 MTR_8g032710 27.843 255 174 4 20 267 20 271 5.63e-26 112
MS.gene68706.t1 MTR_5g055260 28.405 257 117 6 17 273 10 199 7.00e-26 107
MS.gene68706.t1 MTR_3g092780 38.710 124 71 2 21 140 56 178 6.99e-24 107
MS.gene68706.t1 MTR_3g092780 38.095 126 73 2 21 142 56 180 7.03e-24 107
MS.gene68706.t1 MTR_3g092780 38.710 124 71 2 21 140 56 178 8.26e-24 107
MS.gene68706.t1 MTR_3g092780 38.095 126 73 2 21 142 56 180 8.61e-24 107
MS.gene68706.t1 MTR_7g118260 38.356 146 77 3 18 153 11 153 1.19e-23 106
MS.gene68706.t1 MTR_4g064730 60.526 76 30 0 197 272 113 188 1.58e-23 102
MS.gene68706.t1 MTR_7g118260 34.759 187 110 4 18 197 11 192 2.88e-23 104
MS.gene68706.t1 MTR_1g067110 39.344 122 71 2 21 139 85 206 5.10e-23 104
MS.gene68706.t1 MTR_4g061360 40.945 127 71 2 17 139 84 210 5.31e-23 104
MS.gene68706.t1 MTR_1g067110 39.344 122 71 2 21 139 85 206 5.54e-23 104
MS.gene68706.t1 MTR_7g089010 59.155 71 29 0 202 272 78 148 1.07e-21 96.7
MS.gene68706.t1 MTR_8g024260 34.932 146 84 2 23 157 38 183 9.55e-21 97.4
MS.gene68706.t1 MTR_8g093040 33.094 139 93 0 9 147 6 144 2.34e-20 92.0
MS.gene68706.t1 MTR_3g037390 28.251 223 147 4 5 218 10 228 2.19e-19 92.8
MS.gene68706.t1 MTR_4g023980 28.571 175 86 3 67 241 39 174 1.59e-18 84.3
MS.gene68706.t1 MTR_4g108880 31.373 153 100 2 5 154 19 169 1.87e-18 90.1
MS.gene68706.t1 MTR_6g016850 31.579 133 88 2 15 145 7 138 6.78e-18 82.0
MS.gene68706.t1 MTR_4g098870 56.923 65 28 0 211 275 306 370 8.36e-18 87.8
MS.gene68706.t1 MTR_4g098870 56.923 65 28 0 211 275 326 390 9.02e-18 87.8
MS.gene68706.t1 MTR_4g098870 56.923 65 28 0 211 275 306 370 9.15e-18 87.8
MS.gene68706.t1 MTR_4g098870 32.800 125 78 4 17 139 14 134 8.39e-11 65.5
MS.gene68706.t1 MTR_4g098870 56.923 65 28 0 211 275 326 390 9.97e-18 87.4
MS.gene68706.t1 MTR_4g098870 56.923 65 28 0 211 275 345 409 1.17e-17 87.4
MS.gene68706.t1 MTR_5g014040 35.484 155 81 5 211 360 307 447 2.33e-17 86.3
MS.gene68706.t1 MTR_5g014040 36.508 126 72 5 17 139 14 134 1.28e-12 71.2
MS.gene68706.t1 MTR_2g090675 47.436 78 41 0 194 271 140 217 3.89e-17 84.7
MS.gene68706.t1 MTR_4g078810 56.452 62 27 0 210 271 153 214 5.94e-17 84.3
MS.gene68706.t1 MTR_7g115530 56.522 69 28 2 213 279 216 284 1.51e-15 78.6
MS.gene68706.t1 MTR_5g014040 34.375 160 81 6 211 360 267 412 1.84e-15 80.1
MS.gene68706.t1 MTR_5g014040 34.375 160 81 6 211 360 307 452 2.09e-15 80.1
MS.gene68706.t1 MTR_5g014040 36.508 126 72 5 17 139 14 134 1.46e-12 71.2
MS.gene68706.t1 MTR_7g115530 56.522 69 28 2 213 279 216 284 3.00e-15 77.8
MS.gene68706.t1 MTR_4g086835 40.952 105 48 3 212 310 271 367 3.02e-15 79.0
MS.gene68706.t1 MTR_6g032990 57.627 59 24 1 211 268 38 96 3.39e-15 78.6
MS.gene68706.t1 MTR_1g080330 58.621 58 23 1 211 267 171 228 5.02e-15 76.6
MS.gene68706.t1 MTR_7g115530 56.522 69 28 2 213 279 216 284 5.48e-15 78.2
MS.gene68706.t1 MTR_2g086450 57.627 59 24 1 211 268 41 99 6.01e-15 77.8
MS.gene68706.t1 MTR_1g080330 58.621 58 23 1 211 267 171 228 1.04e-14 77.0
MS.gene68706.t1 MTR_7g115530 62.500 56 20 1 213 267 216 271 1.24e-14 76.3
MS.gene68706.t1 MTR_1g053830 53.333 60 27 1 217 275 20 79 1.28e-14 70.5
MS.gene68706.t1 MTR_7g098250 58.621 58 23 1 211 267 258 315 2.15e-14 76.6
MS.gene68706.t1 MTR_4g113140 49.231 65 32 1 212 275 232 296 2.59e-14 76.3
MS.gene68706.t1 MTR_1g093080 35.897 117 68 3 208 319 204 318 3.05e-14 75.5
MS.gene68706.t1 MTR_5g041350 54.237 59 26 1 211 268 11 69 3.16e-14 75.1
MS.gene68706.t1 MTR_5g054300 32.886 149 82 6 205 348 188 323 6.42e-14 74.3
MS.gene68706.t1 MTR_4g086835 40.566 106 48 4 212 310 271 368 9.60e-14 74.3
MS.gene68706.t1 MTR_2g023580 58.182 55 22 1 214 267 54 108 1.81e-13 70.9
MS.gene68706.t1 MTR_7g115530 61.111 54 20 1 213 265 216 269 2.22e-13 71.6
MS.gene68706.t1 MTR_7g490310 31.579 171 86 5 21 170 9 169 3.65e-13 70.1
MS.gene68706.t1 MTR_5g017980 49.180 61 31 0 212 272 189 249 4.14e-13 71.2
MS.gene68706.t1 MTR_5g017980 49.180 61 31 0 212 272 190 250 4.42e-13 71.2
MS.gene68706.t1 MTR_5g027440 54.545 55 24 1 215 268 25 79 1.12e-12 69.3
MS.gene68706.t1 MTR_7g115530 53.333 60 27 1 213 271 216 275 1.17e-12 69.7
MS.gene68706.t1 MTR_6g088950 26.036 169 117 3 19 184 5 168 2.01e-12 67.4
MS.gene68706.t1 MTR_1g090670 52.542 59 27 1 211 268 40 98 2.01e-12 68.9
MS.gene68706.t1 MTR_5g017980 50.000 62 30 1 212 272 190 251 4.58e-12 68.2
MS.gene68706.t1 MTR_7g093030 57.407 54 22 1 215 267 212 265 4.68e-12 67.8
MS.gene68706.t1 MTR_2g027800 44.595 74 36 2 200 268 20 93 4.89e-12 67.8
MS.gene68706.t1 MTR_6g453220 70.455 44 13 0 231 274 379 422 5.00e-12 69.3
MS.gene68706.t1 MTR_2g027800 44.595 74 36 2 200 268 20 93 5.82e-12 67.8
MS.gene68706.t1 MTR_7g069660 54.545 55 24 1 214 267 70 124 6.97e-12 67.8
MS.gene68706.t1 MTR_4g081710 49.153 59 29 1 211 268 13 71 7.94e-12 67.8
MS.gene68706.t1 MTR_7g093030 57.407 54 22 1 215 267 212 265 8.78e-12 67.8
MS.gene68706.t1 MTR_7g088070 54.545 55 24 1 215 268 50 104 9.06e-12 66.6
MS.gene68706.t1 MTR_7g088070 54.545 55 24 1 215 268 50 104 9.23e-12 66.6
MS.gene68706.t1 MTR_2g084230 54.545 55 24 1 214 267 96 150 9.95e-12 67.0
MS.gene68706.t1 MTR_1874s0010 34.513 113 70 2 19 129 2 112 1.41e-11 65.5
MS.gene68706.t1 MTR_2g084230 54.545 55 24 1 214 267 96 150 1.46e-11 67.0
MS.gene68706.t1 MTR_1g053835 56.364 55 23 1 215 268 258 312 1.64e-11 67.4
MS.gene68706.t1 MTR_8g086410 52.727 55 25 1 214 267 108 162 1.80e-11 67.0
MS.gene68706.t1 MTR_8g086410 52.727 55 25 1 214 267 110 164 1.86e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68706.t1 AT2G25180 45.476 431 202 10 13 430 9 419 1.69e-104 331
MS.gene68706.t1 AT5G58080 42.188 512 234 13 10 495 7 482 1.50e-96 311
MS.gene68706.t1 AT4G31920 45.412 425 166 11 13 430 9 374 3.32e-95 305
MS.gene68706.t1 AT3G16857 32.060 733 378 22 5 685 21 685 3.83e-92 301
MS.gene68706.t1 AT3G16857 35.614 570 250 16 5 505 21 542 1.49e-90 296
MS.gene68706.t1 AT1G67710 55.039 258 99 4 18 272 8 251 7.45e-78 258
MS.gene68706.t1 AT3G16857 31.085 682 350 22 56 685 2 615 9.14e-76 256
MS.gene68706.t1 AT2G01760 47.601 271 115 5 15 274 5 259 3.12e-71 236
MS.gene68706.t1 AT2G01760 43.144 299 115 6 15 274 5 287 3.20e-65 221
MS.gene68706.t1 AT1G67710 54.500 200 74 4 76 272 1 186 8.70e-53 189
MS.gene68706.t1 AT2G01760 48.571 210 81 5 76 274 1 194 7.21e-50 177
MS.gene68706.t1 AT5G49240 37.097 248 143 2 17 264 38 272 6.06e-44 160
MS.gene68706.t1 AT3G62670 38.211 246 124 7 36 275 54 277 2.37e-41 156
MS.gene68706.t1 AT1G67710 49.444 180 74 4 96 272 12 177 1.91e-38 149
MS.gene68706.t1 AT1G49190 29.446 343 194 9 3 335 16 320 3.93e-37 144
MS.gene68706.t1 AT5G07210 29.697 330 206 10 19 328 14 337 7.24e-33 134
MS.gene68706.t1 AT5G07210 28.994 338 206 11 19 328 14 345 2.31e-30 127
MS.gene68706.t1 AT2G27070 29.290 338 198 9 19 328 14 338 5.15e-30 125
MS.gene68706.t1 AT5G59570 52.688 93 44 0 180 272 106 198 1.90e-25 107
MS.gene68706.t1 AT5G59570 52.688 93 44 0 180 272 106 198 1.90e-25 107
MS.gene68706.t1 AT5G24470 38.194 144 80 4 11 146 36 178 4.36e-25 110
MS.gene68706.t1 AT2G46790 39.024 123 70 2 21 139 37 158 8.82e-24 105
MS.gene68706.t1 AT2G46790 39.024 123 70 2 21 139 37 158 1.06e-23 105
MS.gene68706.t1 AT1G49190 35.507 138 89 0 3 140 16 153 1.47e-23 106
MS.gene68706.t1 AT5G05090 58.667 75 30 1 199 272 64 138 3.68e-23 100
MS.gene68706.t1 AT3G10760 56.098 82 35 1 192 272 81 162 1.01e-22 100
MS.gene68706.t1 AT3G46640 69.492 59 18 0 214 272 143 201 1.95e-22 99.4
MS.gene68706.t1 AT3G46640 69.492 59 18 0 214 272 143 201 1.95e-22 99.4
MS.gene68706.t1 AT3G46640 58.904 73 30 0 200 272 129 201 2.32e-22 99.0
MS.gene68706.t1 AT2G40970 55.844 77 34 0 196 272 86 162 2.51e-22 97.4
MS.gene68706.t1 AT5G60100 37.008 127 76 2 17 139 59 185 3.76e-21 97.1
MS.gene68706.t1 AT5G60100 37.008 127 76 2 17 139 59 185 3.76e-21 97.1
MS.gene68706.t1 AT5G60100 37.008 127 76 2 17 139 59 185 3.76e-21 97.1
MS.gene68706.t1 AT5G60100 37.008 127 76 2 17 139 59 185 6.34e-21 97.1
MS.gene68706.t1 AT5G60100 37.008 127 76 2 17 139 59 185 6.34e-21 97.1
MS.gene68706.t1 AT5G60100 37.008 127 76 2 17 139 59 185 6.34e-21 97.1
MS.gene68706.t1 AT5G02810 37.705 122 73 1 21 139 78 199 7.65e-21 97.8
MS.gene68706.t1 AT5G60100 37.008 127 76 2 17 139 59 185 1.30e-20 96.3
MS.gene68706.t1 AT5G61380 35.075 134 82 2 11 141 11 142 1.04e-19 94.0
MS.gene68706.t1 AT5G44190 62.121 66 23 1 206 271 140 203 3.89e-19 90.1
MS.gene68706.t1 AT5G44190 62.121 66 23 1 206 271 140 203 4.65e-19 90.5
MS.gene68706.t1 AT1G68210 25.475 263 179 4 21 267 13 274 6.21e-19 92.0
MS.gene68706.t1 AT4G18020 39.669 121 55 1 173 275 236 356 3.74e-16 82.4
MS.gene68706.t1 AT4G18020 39.669 121 55 1 173 275 236 356 3.74e-16 82.4
MS.gene68706.t1 AT4G18020 39.669 121 55 1 173 275 236 356 3.74e-16 82.4
MS.gene68706.t1 AT4G18020 39.669 121 55 1 173 275 236 356 3.74e-16 82.4
MS.gene68706.t1 AT4G18020 39.669 121 55 1 173 275 236 356 3.74e-16 82.4
MS.gene68706.t1 AT4G18020 39.669 121 55 1 173 275 236 356 3.74e-16 82.4
MS.gene68706.t1 AT2G20570 59.322 59 24 0 213 271 151 209 3.99e-16 81.6
MS.gene68706.t1 AT4G18020 39.669 121 55 1 173 275 236 356 5.06e-16 82.0
MS.gene68706.t1 AT4G18020 39.669 121 55 1 173 275 236 356 5.06e-16 82.0
MS.gene68706.t1 AT4G18020 39.669 121 55 1 173 275 236 356 5.06e-16 82.0
MS.gene68706.t1 AT4G18020 39.669 121 55 1 173 275 236 356 5.06e-16 82.0
MS.gene68706.t1 AT4G18020 39.669 121 55 1 173 275 236 356 5.06e-16 82.0
MS.gene68706.t1 AT2G20570 61.818 55 21 0 217 271 171 225 1.85e-15 79.7
MS.gene68706.t1 AT3G04030 57.627 59 24 1 211 268 41 99 5.56e-15 77.8
MS.gene68706.t1 AT3G04030 57.627 59 24 1 211 268 41 99 6.02e-15 77.8
MS.gene68706.t1 AT5G18240 57.627 59 24 1 211 268 41 99 1.07e-14 77.0
MS.gene68706.t1 AT5G18240 57.627 59 24 1 211 268 41 99 1.07e-14 77.0
MS.gene68706.t1 AT5G18240 57.627 59 24 1 211 268 41 99 1.21e-14 77.0
MS.gene68706.t1 AT5G18240 57.627 59 24 1 211 268 41 99 1.23e-14 77.0
MS.gene68706.t1 AT5G18240 57.627 59 24 1 211 268 41 99 1.23e-14 77.0
MS.gene68706.t1 AT2G03500 50.769 65 31 1 212 275 230 294 1.87e-14 76.6
MS.gene68706.t1 AT1G25550 38.983 118 62 4 212 324 206 318 3.08e-14 75.1
MS.gene68706.t1 AT3G04030 53.448 58 27 0 211 268 41 98 7.65e-14 74.3
MS.gene68706.t1 AT2G42660 47.619 84 40 3 216 298 51 131 1.29e-13 72.0
MS.gene68706.t1 AT5G45580 56.364 55 23 1 215 268 7 61 4.73e-13 70.5
MS.gene68706.t1 AT5G45580 56.364 55 23 1 215 268 23 77 5.27e-13 70.5
MS.gene68706.t1 AT1G68670 33.333 132 77 5 212 334 212 341 2.36e-12 69.3
MS.gene68706.t1 AT4G28610 49.231 65 32 1 215 278 225 289 2.37e-12 70.1
MS.gene68706.t1 AT4G37180 43.750 80 38 2 210 282 199 278 3.16e-12 68.9
MS.gene68706.t1 AT4G37180 43.750 80 38 2 210 282 206 285 3.83e-12 68.9
MS.gene68706.t1 AT3G25790 31.405 121 72 3 219 328 200 320 5.51e-12 68.6
MS.gene68706.t1 AT5G06800 50.000 68 33 1 202 268 179 246 5.84e-12 67.4
MS.gene68706.t1 AT4G04605 54.545 55 24 1 214 267 13 67 1.02e-11 65.5
MS.gene68706.t1 AT5G29000 57.407 54 22 1 215 267 231 284 1.11e-11 67.0
MS.gene68706.t1 AT3G04450 55.556 54 23 1 215 267 238 291 1.32e-11 66.6
MS.gene68706.t1 AT5G29000 51.429 70 30 2 215 283 188 254 1.48e-11 67.0
MS.gene68706.t1 AT5G29000 51.429 70 30 2 215 283 188 254 1.48e-11 67.0
MS.gene68706.t1 AT2G01060 54.545 55 24 1 215 268 15 69 1.55e-11 66.2
MS.gene68706.t1 AT5G29000 57.407 54 22 1 215 267 231 284 1.73e-11 67.4
MS.gene68706.t1 AT3G04450 55.556 54 23 1 215 267 238 291 1.93e-11 67.4
MS.gene68706.t1 AT1G49560 43.210 81 42 2 214 290 191 271 2.03e-11 66.2
MS.gene68706.t1 AT3G04450 55.556 54 23 1 215 267 198 251 2.07e-11 67.0
MS.gene68706.t1 AT3G04450 55.556 54 23 1 215 267 198 251 2.07e-11 67.0
MS.gene68706.t1 AT5G06800 50.000 68 33 1 202 268 179 246 2.54e-11 66.6
MS.gene68706.t1 AT5G06800 50.000 68 33 1 202 268 179 246 2.72e-11 66.2
MS.gene68706.t1 AT2G38300 52.727 55 25 1 214 267 53 107 3.21e-11 65.9
MS.gene68706.t1 AT3G13040 53.571 56 25 1 214 268 240 295 3.37e-11 66.6
MS.gene68706.t1 AT3G13040 53.571 56 25 1 214 268 240 295 3.37e-11 66.6
MS.gene68706.t1 AT3G13040 53.571 56 25 1 214 268 240 295 3.37e-11 66.6
MS.gene68706.t1 AT2G06020 35.115 131 62 4 170 295 44 156 4.01e-11 65.1
MS.gene68706.t1 AT3G56380 32.061 131 75 2 21 137 20 150 4.80e-11 62.0
MS.gene68706.t1 AT2G40260 52.727 55 25 1 214 267 81 135 5.98e-11 65.5
MS.gene68706.t1 AT1G13300 41.892 74 42 1 200 272 166 239 6.60e-11 65.1

Find 172 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGCATCTCGGCACATTTC+TGG 0.123885 2.3:+38815931 None:intergenic
TTGCTTCCACCAGAAATATT+AGG 0.214532 2.3:+38817534 None:intergenic
GTTGGATATGTTGAGGGTTT+TGG 0.226504 2.3:-38815578 MS.gene68706:CDS
GATAAGGTCCCTAATATTTC+TGG 0.257219 2.3:-38817543 MS.gene68706:CDS
TGCACCCATTATGTCTTCTA+AGG 0.258237 2.3:+38815553 None:intergenic
AAGCTTGAGCTTTGATTTGC+AGG 0.261012 2.3:+38816439 None:intergenic
GACGAGAATTTCTCAACTTC+GGG 0.287871 2.3:+38815656 None:intergenic
TTCTGTTGGATCTGCTTCCT+TGG 0.307813 2.3:-38816197 MS.gene68706:CDS
ACAAATTTCTTATGCAAATC+AGG 0.313939 2.3:+38817339 None:intergenic
TGAAGGGACGACTCGTGTTT+TGG 0.320959 2.3:+38815828 None:intergenic
ATATAGACTCTATCTGAAAA+AGG 0.324190 2.3:-38816722 MS.gene68706:CDS
ATTTCTCAACTTCGGGGTAC+TGG 0.340831 2.3:+38815663 None:intergenic
ATTTCCTGCTAGTGCTTTGC+CGG 0.341449 2.3:-38816083 MS.gene68706:CDS
AGATGCCAAGATGGCTTGAT+TGG 0.342606 2.3:-38815917 MS.gene68706:CDS
TACTAGCATGGTTGCTGGAC+TGG 0.346162 2.3:-38816686 MS.gene68706:CDS
TGCTTCCACCAGAAATATTA+GGG 0.349156 2.3:+38817535 None:intergenic
CACCATTGTTTAGGTTAGAT+TGG 0.351569 2.3:+38816389 None:intergenic
GTTATGCTCCGCGACAAAAC+TGG 0.353541 2.3:-38815874 MS.gene68706:CDS
CCATGGTGCATGTGACTATC+TGG 0.354596 2.3:-38817664 MS.gene68706:CDS
CTTCAGACTTTCAAGATAGT+AGG 0.356157 2.3:-38816315 MS.gene68706:CDS
TACCAGTTGCACCATTGTTT+AGG 0.365444 2.3:+38816380 None:intergenic
ACAGTGCTGATCGGAATAAA+AGG 0.366820 2.3:-38817494 MS.gene68706:CDS
TTATCTTGTTCTAGTGTTGT+CGG 0.373558 2.3:-38817724 MS.gene68706:intron
AACCTAAACAATGGTGCAAC+TGG 0.377336 2.3:-38816382 MS.gene68706:CDS
ATTAGGGACCTTATCCTCAT+TGG 0.379637 2.3:+38817551 None:intergenic
CACAATCACTGCTGCTTTGG+AGG 0.379911 2.3:-38815957 MS.gene68706:CDS
TCTGTTGGATCTGCTTCCTT+GGG 0.381102 2.3:-38816196 MS.gene68706:CDS
GGAAGCCTTGTTATCATCCT+TGG 0.385654 2.3:+38817572 None:intergenic
AAATGTAGCAAGCCATTTGC+AGG 0.393120 2.3:-38817106 MS.gene68706:intron
CTAAGCTCTTCAAGTCGAAC+AGG 0.403595 2.3:+38817636 None:intergenic
AAACACAATCACTGCTGCTT+TGG 0.405385 2.3:-38815960 MS.gene68706:CDS
AATCAAATGCATGATCCAAC+AGG 0.405727 2.3:+38813883 None:intergenic
TTTGGCACCTCAACCAGATC+TGG 0.406957 2.3:-38816610 MS.gene68706:CDS
GAGAGTGAAGGGAGTGCAGA+TGG 0.407661 2.3:-38817411 MS.gene68706:CDS
TATCTTGTTCTAGTGTTGTC+GGG 0.408272 2.3:-38817723 MS.gene68706:intron
GCTTGCGATCCTTCCAGATC+TGG 0.414334 2.3:+38816597 None:intergenic
ATAATCGGTGTAGTGAAAAC+TGG 0.418658 2.3:-38816129 MS.gene68706:CDS
TGGATTTAAGTTGCTTGAAT+TGG 0.418723 2.3:-38817881 MS.gene68706:CDS
GGAAACAGAAACATTACTAT+TGG 0.419569 2.3:-38816175 MS.gene68706:CDS
CCTCATCTTCTCCAACTTGT+AGG 0.419938 2.3:+38815607 None:intergenic
GCAGTTACTACAGCTACTAA+TGG 0.421788 2.3:-38817985 MS.gene68706:intron
CTCAAAACATCAACAACTCC+TGG 0.422296 2.3:-38816465 MS.gene68706:CDS
GTTTGAGACTTGATTAGAAC+TGG 0.423035 2.3:+38816285 None:intergenic
TTCCTTGCAACAACAGATGA+TGG 0.430350 2.3:+38816263 None:intergenic
TGGAACCTTAGAAGACATAA+TGG 0.430422 2.3:-38815558 MS.gene68706:CDS
CAAGGCTTCCAATGAGGATA+AGG 0.433857 2.3:-38817559 MS.gene68706:CDS
TAATGGGTGCAATAGTCAAA+AGG 0.436630 2.3:-38815541 MS.gene68706:CDS
TGTTAGCGATAAGAGGGCTT+TGG 0.437040 2.3:+38816005 None:intergenic
CTTCGGATGAGTGGAATAGA+TGG 0.438392 2.3:-38816643 MS.gene68706:CDS
CATCATACTAGCATGGTTGC+TGG 0.444803 2.3:-38816691 MS.gene68706:CDS
TGGAAGCAATCAGAACATAT+TGG 0.447324 2.3:-38817520 MS.gene68706:CDS
GGGATACAGTGATACAAGTA+TGG 0.449701 2.3:-38817703 MS.gene68706:CDS
AATTCCCAATCAAGCCATCT+TGG 0.450564 2.3:+38815912 None:intergenic
AACTTAAATCCATCCATGTC+AGG 0.455967 2.3:+38817892 None:intergenic
GGAACCTTAGAAGACATAAT+GGG 0.455999 2.3:-38815557 MS.gene68706:CDS
AAAGCACTAGCAGGAAATTC+AGG 0.456039 2.3:+38816088 None:intergenic
TGAATTGGTAGGACTTGAAA+TGG 0.456042 2.3:-38817866 MS.gene68706:CDS
TGATACAAGTATGGTATTCA+AGG 0.457007 2.3:-38817694 MS.gene68706:CDS
GCCAAGACTTTGAGACAAGT+TGG 0.461455 2.3:+38818633 None:intergenic
ACTGGACTGTTAGCGATAAG+AGG 0.464251 2.3:+38815998 None:intergenic
ACTAGCATGGTTGCTGGACT+GGG 0.464924 2.3:-38816685 MS.gene68706:CDS
TTGAAGAGCTTAGAAACATA+TGG 0.466760 2.3:-38817626 MS.gene68706:CDS
CTTGAGCTGATGAATATTGA+AGG 0.466769 2.3:-38817141 MS.gene68706:CDS
GCAAGAACACGCATACCAAC+AGG 0.467353 2.3:+38818669 None:intergenic
TGTCGCGGAGCATAACTTGA+AGG 0.467950 2.3:+38815881 None:intergenic
CTTCAATCCTTTGAACTCAC+AGG 0.468279 2.3:-38815810 MS.gene68706:CDS
CCAAGACTTTGAGACAAGTT+GGG 0.470214 2.3:+38818634 None:intergenic
AGAAGAAACCTCGTGTGGTT+TGG 0.471370 2.3:-38817365 MS.gene68706:CDS
CCTCTCATGTTCAAGCCGGC+TGG 0.473952 2.3:+38816523 None:intergenic
TGACGAGAATTTCTCAACTT+CGG 0.474747 2.3:+38815655 None:intergenic
ATCAAGCCATCTTGGCATCT+CGG 0.475852 2.3:+38815920 None:intergenic
TTAGATTGGTTAAGCTCGGT+TGG 0.477468 2.3:+38816403 None:intergenic
GTGGTAATGATTCTTACCTT+CGG 0.478612 2.3:-38816660 MS.gene68706:CDS
GTCAGAAATCAGTCTTCTGT+TGG 0.479269 2.3:-38816211 MS.gene68706:CDS
AAGATGATGAAGAGAGTGAA+GGG 0.479274 2.3:-38817422 MS.gene68706:CDS
GCTTTGATTTGCAGGAATCC+AGG 0.479427 2.3:+38816447 None:intergenic
CTGTGAGTTCAAAGGATTGA+AGG 0.479684 2.3:+38815811 None:intergenic
TTTCTCAACTTCGGGGTACT+GGG 0.482057 2.3:+38815664 None:intergenic
CAGCAACCATGCTAGTATGA+TGG 0.485179 2.3:+38816692 None:intergenic
TTTCCAGACGAAAAGTCAAC+TGG 0.489789 2.3:+38815980 None:intergenic
CGAGGTTTCTTCTGTGATGA+CGG 0.491161 2.3:+38817375 None:intergenic
GATGCCAAGATGGCTTGATT+GGG 0.492450 2.3:-38815916 MS.gene68706:CDS
TCCCAAGTTGGATATGTTGA+GGG 0.496240 2.3:-38815584 MS.gene68706:CDS
AACCCTCAACATATCCAACT+TGG 0.496341 2.3:+38815582 None:intergenic
ATCAAAGGAGAGATGAAGAT+GGG 0.500012 2.3:-38818707 MS.gene68706:CDS
GCAAATTGAGATGACATTGA+TGG 0.500991 2.3:-38813932 MS.gene68706:CDS
TAGGTTAGATTGGTTAAGCT+CGG 0.501769 2.3:+38816399 None:intergenic
GTTTGTGCTGTTAATCAACT+TGG 0.503058 2.3:-38817318 MS.gene68706:CDS
ATGGTTGCTGGACTGGGCGG+TGG 0.508241 2.3:-38816679 MS.gene68706:CDS
TTCAGACTTTCAAGATAGTA+GGG 0.510320 2.3:-38816314 MS.gene68706:CDS
AACAGAAACATTACTATTGG+CGG 0.510655 2.3:-38816172 MS.gene68706:CDS
AGCAACCATGCTAGTATGAT+GGG 0.510988 2.3:+38816693 None:intergenic
TTTAAGTTGCTTGAATTGGT+AGG 0.511254 2.3:-38817877 MS.gene68706:CDS
AGAATTTGTCAATGCCCTAC+TGG 0.521387 2.3:+38815781 None:intergenic
AATCAAAGGAGAGATGAAGA+TGG 0.521500 2.3:-38818708 MS.gene68706:CDS
ATAGATGGATATGCAGACTT+TGG 0.523223 2.3:-38816628 MS.gene68706:CDS
CCCAACTTGTCTCAAAGTCT+TGG 0.525945 2.3:-38818634 MS.gene68706:CDS
TTATGCTCCGCGACAAAACT+GGG 0.527456 2.3:-38815873 MS.gene68706:CDS
TTAAATCAAATAGATTCCAC+TGG 0.528119 2.3:-38816349 MS.gene68706:CDS
TCACAACAGACACACAATGC+AGG 0.528194 2.3:-38816238 MS.gene68706:CDS
GAAGATGATGAAGAGAGTGA+AGG 0.530545 2.3:-38817423 MS.gene68706:CDS
GTCCCAAGTTGGATATGTTG+AGG 0.530635 2.3:-38815585 MS.gene68706:CDS
AAGGAAGGAGCAAGATGAGG+AGG 0.530715 2.3:-38817460 MS.gene68706:CDS
CTCACAGGTTTGTTCCAGTA+GGG 0.532258 2.3:-38815795 MS.gene68706:CDS
CACGCATACCAACAGGAAAA+CGG 0.532394 2.3:+38818676 None:intergenic
AGATGGGTGTGGAGAATCAA+AGG 0.532717 2.3:-38818722 MS.gene68706:CDS
AATGGGTGCAATAGTCAAAA+GGG 0.534269 2.3:-38815540 MS.gene68706:intron
CTTGCTGAATGCAAATATCA+TGG 0.534603 2.3:-38818603 MS.gene68706:intron
AAACTGGGCAGAAAATAAAC+CGG 0.545815 2.3:-38815858 MS.gene68706:CDS
CAAGAATAAAGACCTGCAAA+TGG 0.545943 2.3:+38817094 None:intergenic
CACGAATGATGCCTACAAGT+TGG 0.548868 2.3:-38815618 MS.gene68706:CDS
ATAAAAGGCTCGGTAAAAGA+AGG 0.549420 2.3:-38817479 MS.gene68706:CDS
GAGGTTTCTTCTGTGATGAC+GGG 0.558825 2.3:+38817376 None:intergenic
CAAAGCTCAAGCTTATTACA+TGG 0.559367 2.3:-38816430 MS.gene68706:CDS
GATTCTTACCTTCGGATGAG+TGG 0.560817 2.3:-38816652 MS.gene68706:CDS
CATACCGGCAAAGCACTAGC+AGG 0.561071 2.3:+38816079 None:intergenic
AAGAAGGAAGGAGCAAGATG+AGG 0.564374 2.3:-38817463 MS.gene68706:CDS
CTACCGAAAACTCCGCTCGA+TGG 0.564638 2.3:+38816556 None:intergenic
TGTATGAACTTACTGATGAC+AGG 0.566085 2.3:+38817838 None:intergenic
CAGATAGTCACATGCACCAT+GGG 0.568320 2.3:+38817665 None:intergenic
AATTCCTCTCATGTTCAAGC+CGG 0.569294 2.3:+38816519 None:intergenic
TGTTATGATGCATACCCTGT+TGG 0.570787 2.3:-38813898 MS.gene68706:CDS
AACCATCATCTGTTGTTGCA+AGG 0.571223 2.3:-38816265 MS.gene68706:CDS
GATACAAGTATGGTATTCAA+GGG 0.580166 2.3:-38817693 MS.gene68706:CDS
CTGGACTGTTAGCGATAAGA+GGG 0.580850 2.3:+38815999 None:intergenic
AGTAATGTTTCTGTTTCCCA+AGG 0.584116 2.3:+38816180 None:intergenic
TAATGTTATTGAGAGGCAGT+TGG 0.591128 2.3:+38816038 None:intergenic
GTGGCTATGCCTGACATGGA+TGG 0.592957 2.3:-38817901 MS.gene68706:CDS
GATCCTTCCAGATCTGGTTG+AGG 0.592986 2.3:+38816603 None:intergenic
ACCCTCAACATATCCAACTT+GGG 0.593353 2.3:+38815583 None:intergenic
GAACAAACCTGTGAGTTCAA+AGG 0.594050 2.3:+38815803 None:intergenic
GGGGTACTGGGCAACTGACG+TGG 0.594340 2.3:+38815676 None:intergenic
TTGAGCTGATGAATATTGAA+GGG 0.595042 2.3:-38817140 MS.gene68706:CDS
ACTCCGCTCGATGGATATGA+CGG 0.596427 2.3:+38816565 None:intergenic
TAGCCACATCACTGATAACC+AGG 0.596968 2.3:+38817917 None:intergenic
CACAACAGACACACAATGCA+GGG 0.597049 2.3:-38816237 MS.gene68706:CDS
TTATTGAAAGACTTGCATAC+CGG 0.597636 2.3:+38816064 None:intergenic
AATGTGCCGAGATGCCAAGA+TGG 0.600462 2.3:-38815926 MS.gene68706:CDS
AGGGAGTGCAGATGGAGATG+AGG 0.602885 2.3:-38817403 MS.gene68706:CDS
AAGGTCCCTAATATTTCTGG+TGG 0.603122 2.3:-38817540 MS.gene68706:CDS
AAAGCAGTAATGTTATTGAG+AGG 0.604446 2.3:+38816031 None:intergenic
GAGAAGATGAGGTCCCAAGT+TGG 0.610844 2.3:-38815596 MS.gene68706:CDS
ACTCACAGGTTTGTTCCAGT+AGG 0.610848 2.3:-38815796 MS.gene68706:CDS
CATCTATTCCACTCATCCGA+AGG 0.612751 2.3:+38816644 None:intergenic
TGTGAGTTCAAAGGATTGAA+GGG 0.613107 2.3:+38815812 None:intergenic
TATTGGAGAACAGTGCTGAT+CGG 0.614955 2.3:-38817503 MS.gene68706:CDS
GTATTCAAGGGTGTTACCCA+TGG 0.618028 2.3:-38817681 MS.gene68706:CDS
CCAGATAGTCACATGCACCA+TGG 0.618479 2.3:+38817664 None:intergenic
GGTAGGCTGAATTCTCCAGC+CGG 0.622126 2.3:-38816538 MS.gene68706:CDS
TGATGTGGCTATGCCTGACA+TGG 0.623238 2.3:-38817905 MS.gene68706:CDS
AACTCCCCATCATACTAGCA+TGG 0.628311 2.3:-38816698 MS.gene68706:CDS
AACCAATCTAACCTAAACAA+TGG 0.629254 2.3:-38816391 MS.gene68706:CDS
GCTGATCGGAATAAAAGGCT+CGG 0.629794 2.3:-38817489 MS.gene68706:CDS
AAGGCTCGGTAAAAGAAGGA+AGG 0.633186 2.3:-38817475 MS.gene68706:CDS
ATTGAGATGACATTGATGGA+TGG 0.636234 2.3:-38813928 MS.gene68706:CDS
CCTACAAGTTGGAGAAGATG+AGG 0.646079 2.3:-38815607 MS.gene68706:CDS
TGAAGCAGTTGCAAATCCAG+TGG 0.651314 2.3:+38816333 None:intergenic
TAATTCCAAGGATGATAACA+AGG 0.654052 2.3:-38817577 MS.gene68706:CDS
CCAGCCGGCTTGAACATGAG+AGG 0.656492 2.3:-38816523 MS.gene68706:CDS
TCAAAGGAGAGATGAAGATG+GGG 0.663775 2.3:-38818706 MS.gene68706:CDS
GCACCTCAACCAGATCTGGA+AGG 0.664461 2.3:-38816606 MS.gene68706:CDS
TGATAACAAGGCTTCCAATG+AGG 0.667904 2.3:-38817565 MS.gene68706:CDS
AGCATGGTTGCTGGACTGGG+CGG 0.674097 2.3:-38816682 MS.gene68706:CDS
TCAGGAGACCAAACCACACG+AGG 0.674901 2.3:+38817357 None:intergenic
ACGAGAATTTCTCAACTTCG+GGG 0.680347 2.3:+38815657 None:intergenic
TGACCTGGTTATCAGTGATG+TGG 0.683171 2.3:-38817920 MS.gene68706:CDS
AAACAGAAAGAACTATGACC+TGG 0.684794 2.3:-38817935 MS.gene68706:CDS
GCAACCATGCTAGTATGATG+GGG 0.686090 2.3:+38816694 None:intergenic
ATCAAATGCATGATCCAACA+GGG 0.688787 2.3:+38813884 None:intergenic
TTGCCGTCATATCCATCGAG+CGG 0.699753 2.3:-38816568 MS.gene68706:CDS
ATCACAGAAGAAACCTCGTG+TGG 0.712689 2.3:-38817370 MS.gene68706:CDS
CGATGGATATGACGGCAATG+TGG 0.745057 2.3:+38816573 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATATATTTTTTTTTT+AGG - chr2.3:38814540-38814559 MS.gene68706:intron 0.0%
!! TAAAAAATAATTTCATGATT+TGG + chr2.3:38815574-38815593 None:intergenic 10.0%
!! TTAAAATAAAAAGACAATAA+AGG + chr2.3:38817570-38817589 None:intergenic 10.0%
!!! ATATTTTTTTTTTAGGTTTT+TGG - chr2.3:38814547-38814566 MS.gene68706:intron 10.0%
!!! TTTTATTTATTTTGGTATAA+CGG - chr2.3:38817302-38817321 MS.gene68706:intron 10.0%
!! AAATAATGCAAAAGAATTTA+TGG - chr2.3:38817444-38817463 MS.gene68706:CDS 15.0%
!! ATAAATGTTAATTCATCATT+TGG + chr2.3:38815662-38815681 None:intergenic 15.0%
!! TAAAATTACAAAAAGCTATA+TGG + chr2.3:38818524-38818543 None:intergenic 15.0%
!! TGAACTAAAACATAAAATTA+AGG + chr2.3:38814068-38814087 None:intergenic 15.0%
!! TTTGAGAAAATCATATAATT+CGG + chr2.3:38814235-38814254 None:intergenic 15.0%
!!! AAATAAATAAAATGATAACG+CGG + chr2.3:38817294-38817313 None:intergenic 15.0%
!!! ATAGCTTTTTGTAATTTTAA+GGG - chr2.3:38818525-38818544 MS.gene68706:intron 15.0%
!!! CGTTATCATTTTATTTATTT+TGG - chr2.3:38817294-38817313 MS.gene68706:intron 15.0%
!!! CTAATTTTTTGGATTATAAT+CGG - chr2.3:38816461-38816480 MS.gene68706:CDS 15.0%
!!! GTTCTATTAATTTTGTTTAA+AGG - chr2.3:38817689-38817708 MS.gene68706:CDS 15.0%
!!! TATAGCTTTTTGTAATTTTA+AGG - chr2.3:38818524-38818543 MS.gene68706:intron 15.0%
!!! TGATTTTCTCAAATTATTAA+CGG - chr2.3:38814242-38814261 MS.gene68706:intron 15.0%
!! AAAGAAAAAAACTAATTCCA+AGG - chr2.3:38815016-38815035 MS.gene68706:intron 20.0%
!! AATGATGAATGTAATTTAGA+CGG - chr2.3:38817712-38817731 MS.gene68706:CDS 20.0%
!! ATCTTAACATGAAAGATAAA+AGG + chr2.3:38818288-38818307 None:intergenic 20.0%
!! ATTCTTCTATTTACAATAAC+GGG - chr2.3:38814814-38814833 MS.gene68706:intron 20.0%
!! ATTTCTTCATAAAAATGAAG+AGG + chr2.3:38815803-38815822 None:intergenic 20.0%
!! CATTCTTCTATTTACAATAA+CGG - chr2.3:38814813-38814832 MS.gene68706:intron 20.0%
!! TCTATAATGTTAGATACTAT+AGG - chr2.3:38818475-38818494 MS.gene68706:intron 20.0%
!! TCTTAAATTATTATACGTGT+CGG + chr2.3:38814394-38814413 None:intergenic 20.0%
!! TCTTAACATGAAAGATAAAA+GGG + chr2.3:38818287-38818306 None:intergenic 20.0%
!!! AGTCTACTACATTATTTTTT+TGG - chr2.3:38817175-38817194 MS.gene68706:intron 20.0%
!!! ATAATTTCATGATTTGGAAA+AGG + chr2.3:38815568-38815587 None:intergenic 20.0%
!!! CATGAGAATAAATCTTTTAT+TGG + chr2.3:38815411-38815430 None:intergenic 20.0%
!!! TACTAAGTTCTAAAGTAATA+AGG + chr2.3:38814117-38814136 None:intergenic 20.0%
!!! TCTTTTGCATTATTTCTAAA+AGG + chr2.3:38817439-38817458 None:intergenic 20.0%
!!! TGAATTTTGAATACTTCTTT+TGG - chr2.3:38817330-38817349 MS.gene68706:CDS 20.0%
!!! TGGAATTAGTTTTTTTCTTT+CGG + chr2.3:38815016-38815035 None:intergenic 20.0%
!!! TGTATCTAGTATTATTTCTT+TGG - chr2.3:38817360-38817379 MS.gene68706:CDS 20.0%
!!! TTAAGTGTAATAATTTGTGT+CGG - chr2.3:38814425-38814444 MS.gene68706:intron 20.0%
!!! TTACATTGCTATTAGAATTT+AGG - chr2.3:38814574-38814593 MS.gene68706:intron 20.0%
!!! TTTTAACTTAATTGTATGCA+AGG - chr2.3:38817584-38817603 MS.gene68706:CDS 20.0%
! AATGCAAATTTGTCTACATT+TGG + chr2.3:38817498-38817517 None:intergenic 25.0%
! ACAAATTTCTTATGCAAATC+AGG + chr2.3:38815269-38815288 None:intergenic 25.0%
! ACATCAACCTTATATATTAG+TGG + chr2.3:38818201-38818220 None:intergenic 25.0%
! AGATAAAAGGGTAGATATAA+TGG + chr2.3:38818275-38818294 None:intergenic 25.0%
! ATATAGACTCTATCTGAAAA+AGG - chr2.3:38815883-38815902 MS.gene68706:CDS 25.0%
! ATATATTTGAATTCTCACCT+TGG - chr2.3:38818548-38818567 MS.gene68706:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG + chr2.3:38818033-38818052 None:intergenic 25.0%
! TATTGAAATTATGCAGACTA+TGG + chr2.3:38817405-38817424 None:intergenic 25.0%
! TGCAAGATAGTTTCAAATAA+TGG - chr2.3:38818155-38818174 MS.gene68706:intron 25.0%
! TTAAATCAAATAGATTCCAC+TGG - chr2.3:38816256-38816275 MS.gene68706:CDS 25.0%
! TTCTTCAATAACTATGAAAC+AGG - chr2.3:38817629-38817648 MS.gene68706:CDS 25.0%
!! ATTATTTGAAACTATCTTGC+AGG + chr2.3:38818156-38818175 None:intergenic 25.0%
!! ATTTAGTTTAGTTTAGTCGA+CGG - chr2.3:38817251-38817270 MS.gene68706:intron 25.0%
!! TCTTTTGTTGATCATGTATA+TGG - chr2.3:38816901-38816920 MS.gene68706:intron 25.0%
!! TTATTTGAAACTATCTTGCA+GGG + chr2.3:38818155-38818174 None:intergenic 25.0%
!!! GATAGTTTCAAATAATGGAT+TGG - chr2.3:38818160-38818179 MS.gene68706:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr2.3:38817857-38817876 MS.gene68706:CDS 25.0%
!!! TAGAATTTAGGTTTGATTTG+TGG - chr2.3:38814586-38814605 MS.gene68706:intron 25.0%
!!! TTTCAAATAATGGATTGGAT+TGG - chr2.3:38818165-38818184 MS.gene68706:intron 25.0%
AAAGCAGTAATGTTATTGAG+AGG + chr2.3:38816577-38816596 None:intergenic 30.0%
AAATTTATGAAGCACGGATA+CGG + chr2.3:38814285-38814304 None:intergenic 30.0%
AACAACTTCATATGTAGACA+TGG - chr2.3:38815373-38815392 MS.gene68706:intron 30.0%
AACAGAAACATTACTATTGG+CGG - chr2.3:38816433-38816452 MS.gene68706:CDS 30.0%
AACCAATCTAACCTAAACAA+TGG - chr2.3:38816214-38816233 MS.gene68706:CDS 30.0%
AACCATTCGAAAAGATTTAG+AGG - chr2.3:38817993-38818012 MS.gene68706:intron 30.0%
AATAAACTTGTCTAGTCAGT+AGG + chr2.3:38815748-38815767 None:intergenic 30.0%
ATGTTAAGATCATATCTCTC+AGG - chr2.3:38818298-38818317 MS.gene68706:intron 30.0%
GATACAAGTATGGTATTCAA+GGG - chr2.3:38814912-38814931 MS.gene68706:intron 30.0%
GGAAACAGAAACATTACTAT+TGG - chr2.3:38816430-38816449 MS.gene68706:CDS 30.0%
GTAGCAAAATTTATGAAGCA+CGG + chr2.3:38814291-38814310 None:intergenic 30.0%
GTCTGCATAATTTCAATATC+AGG - chr2.3:38817407-38817426 MS.gene68706:CDS 30.0%
TAATTCCAAGGATGATAACA+AGG - chr2.3:38815028-38815047 MS.gene68706:intron 30.0%
TCTCAAATTATTAACGGTGT+CGG - chr2.3:38814248-38814267 MS.gene68706:intron 30.0%
TGATACAAGTATGGTATTCA+AGG - chr2.3:38814911-38814930 MS.gene68706:intron 30.0%
TGATGCACTAAAAATGTTGA+GGG - chr2.3:38814646-38814665 MS.gene68706:intron 30.0%
TGTAAGAAGAGTAGATCAAA+TGG - chr2.3:38817918-38817937 MS.gene68706:CDS 30.0%
TTATCTTGTTCTAGTGTTGT+CGG - chr2.3:38814881-38814900 MS.gene68706:intron 30.0%
TTATTGAAAGACTTGCATAC+CGG + chr2.3:38816544-38816563 None:intergenic 30.0%
TTCAGACTTTCAAGATAGTA+GGG - chr2.3:38816291-38816310 MS.gene68706:CDS 30.0%
TTGAAGAGCTTAGAAACATA+TGG - chr2.3:38814979-38814998 MS.gene68706:intron 30.0%
TTGAGCTGATGAATATTGAA+GGG - chr2.3:38815465-38815484 MS.gene68706:intron 30.0%
TTGATCTACTCTTCTTACAA+CGG + chr2.3:38817917-38817936 None:intergenic 30.0%
TTGATGCACTAAAAATGTTG+AGG - chr2.3:38814645-38814664 MS.gene68706:intron 30.0%
! ATCAGCTCAAGTATTTTCTT+CGG + chr2.3:38815455-38815474 None:intergenic 30.0%
! ATTGAATCGGTTTATTGACT+CGG - chr2.3:38814841-38814860 MS.gene68706:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr2.3:38817976-38817995 None:intergenic 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr2.3:38817853-38817872 None:intergenic 30.0%
! TGATTTTGTGCTAAATGATG+TGG - chr2.3:38818441-38818460 MS.gene68706:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG - chr2.3:38818037-38818056 MS.gene68706:intron 30.0%
! TTTTCGAATGGTTTCTCTAA+TGG + chr2.3:38817986-38818005 None:intergenic 30.0%
!! AAGTTCTAAAGTAATAAGGC+TGG + chr2.3:38814113-38814132 None:intergenic 30.0%
!! AATAACGGGTTGAATTGAAT+CGG - chr2.3:38814828-38814847 MS.gene68706:intron 30.0%
!! TGGATTTAAGTTGCTTGAAT+TGG - chr2.3:38814724-38814743 MS.gene68706:intron 30.0%
!! TTTAAGTTGCTTGAATTGGT+AGG - chr2.3:38814728-38814747 MS.gene68706:intron 30.0%
AAACAGAAAGAACTATGACC+TGG - chr2.3:38814670-38814689 MS.gene68706:intron 35.0%
AAACTGGGCAGAAAATAAAC+CGG - chr2.3:38816747-38816766 MS.gene68706:intron 35.0%
AACGATTATGGTGACTACAA+AGG + chr2.3:38815537-38815556 None:intergenic 35.0%
AACTTAAATCCATCCATGTC+AGG + chr2.3:38814716-38814735 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr2.3:38817921-38817940 MS.gene68706:CDS 35.0%
AAGATGATGAAGAGAGTGAA+GGG - chr2.3:38815183-38815202 MS.gene68706:intron 35.0%
AAGGCTAAACAGAACGATTA+TGG + chr2.3:38815549-38815568 None:intergenic 35.0%
AATCAAAGGAGAGATGAAGA+TGG - chr2.3:38813897-38813916 MS.gene68706:CDS 35.0%
AATGGGTGCAATAGTCAAAA+GGG - chr2.3:38817065-38817084 MS.gene68706:intron 35.0%
ACAGACACACTATTTCGATT+AGG - chr2.3:38814153-38814172 MS.gene68706:intron 35.0%
AGACTAGATAGGATAGGATT+AGG - chr2.3:38817795-38817814 MS.gene68706:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr2.3:38818005-38818024 MS.gene68706:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr2.3:38817846-38817865 MS.gene68706:intron 35.0%
AGGACATACATTCAAATCCA+AGG + chr2.3:38818568-38818587 None:intergenic 35.0%
ATAATCGGTGTAGTGAAAAC+TGG - chr2.3:38816476-38816495 MS.gene68706:CDS 35.0%
ATAGATGGATATGCAGACTT+TGG - chr2.3:38815977-38815996 MS.gene68706:CDS 35.0%
ATCAAAGGAGAGATGAAGAT+GGG - chr2.3:38813898-38813917 MS.gene68706:CDS 35.0%
ATTGAGATGACATTGATGGA+TGG - chr2.3:38818677-38818696 MS.gene68706:CDS 35.0%
CAAAGCTCAAGCTTATTACA+TGG - chr2.3:38816175-38816194 MS.gene68706:CDS 35.0%
CAAGAATAAAGACCTGCAAA+TGG + chr2.3:38815514-38815533 None:intergenic 35.0%
CATGATAGACTTTGTAATGC+AGG - chr2.3:38818649-38818668 MS.gene68706:CDS 35.0%
CTTACAATGTCTTAGAGAGA+TGG + chr2.3:38818597-38818616 None:intergenic 35.0%
CTTCAGACTTTCAAGATAGT+AGG - chr2.3:38816290-38816309 MS.gene68706:CDS 35.0%
CTTGAGCTGATGAATATTGA+AGG - chr2.3:38815464-38815483 MS.gene68706:intron 35.0%
CTTGCTGAATGCAAATATCA+TGG - chr2.3:38814002-38814021 MS.gene68706:intron 35.0%
GATAAGGTCCCTAATATTTC+TGG - chr2.3:38815062-38815081 MS.gene68706:intron 35.0%
GCAAATTGAGATGACATTGA+TGG - chr2.3:38818673-38818692 MS.gene68706:CDS 35.0%
GCAAGCACCACTAATATATA+AGG - chr2.3:38818191-38818210 MS.gene68706:intron 35.0%
GGAACCTTAGAAGACATAAT+GGG - chr2.3:38817048-38817067 MS.gene68706:intron 35.0%
GTAACTATATGTGTCAGTGT+CGG + chr2.3:38814211-38814230 None:intergenic 35.0%
GTAGACTAGAGCAAGAAAAA+AGG + chr2.3:38817162-38817181 None:intergenic 35.0%
TAATGTTATTGAGAGGCAGT+TGG + chr2.3:38816570-38816589 None:intergenic 35.0%
TATCTTGTTCTAGTGTTGTC+GGG - chr2.3:38814882-38814901 MS.gene68706:intron 35.0%
TGAATTGGTAGGACTTGAAA+TGG - chr2.3:38814739-38814758 MS.gene68706:intron 35.0%
TGACGAGAATTTCTCAACTT+CGG + chr2.3:38816953-38816972 None:intergenic 35.0%
TGCTTCCACCAGAAATATTA+GGG + chr2.3:38815073-38815092 None:intergenic 35.0%
TGGAACCTTAGAAGACATAA+TGG - chr2.3:38817047-38817066 MS.gene68706:intron 35.0%
TGGAAGCAATCAGAACATAT+TGG - chr2.3:38815085-38815104 MS.gene68706:intron 35.0%
TGGATTGAAAGTTTAGTCTG+CGG - chr2.3:38817195-38817214 MS.gene68706:intron 35.0%
TGTATGAACTTACTGATGAC+AGG + chr2.3:38814770-38814789 None:intergenic 35.0%
TGTGAGTTCAAAGGATTGAA+GGG + chr2.3:38816796-38816815 None:intergenic 35.0%
TTGCTTCCACCAGAAATATT+AGG + chr2.3:38815074-38815093 None:intergenic 35.0%
! AGTAATGTTTCTGTTTCCCA+AGG + chr2.3:38816428-38816447 None:intergenic 35.0%
! ATAAAAGGCTCGGTAAAAGA+AGG - chr2.3:38815126-38815145 MS.gene68706:intron 35.0%
! ATAAAGGTGTATGTAACCAG+AGG + chr2.3:38817554-38817573 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr2.3:38818017-38818036 MS.gene68706:intron 35.0%
! CACCATTGTTTAGGTTAGAT+TGG + chr2.3:38816219-38816238 None:intergenic 35.0%
! GACCTCTAAATCTTTTCGAA+TGG + chr2.3:38817998-38818017 None:intergenic 35.0%
! GGTTGTTGTTGTTGTTGTAA+GGG - chr2.3:38818106-38818125 MS.gene68706:intron 35.0%
! GTAATAATTTGTGTCGGTGT+CGG - chr2.3:38814431-38814450 MS.gene68706:intron 35.0%
! GTGGTAATGATTCTTACCTT+CGG - chr2.3:38815945-38815964 MS.gene68706:CDS 35.0%
! GTTGTTGTTGTTGTTGTAAG+GGG - chr2.3:38818107-38818126 MS.gene68706:intron 35.0%
! GTTTGAGACTTGATTAGAAC+TGG + chr2.3:38816323-38816342 None:intergenic 35.0%
! GTTTGTGCTGTTAATCAACT+TGG - chr2.3:38815287-38815306 MS.gene68706:intron 35.0%
! TAATGGGTGCAATAGTCAAA+AGG - chr2.3:38817064-38817083 MS.gene68706:intron 35.0%
! TAGGTTAGATTGGTTAAGCT+CGG + chr2.3:38816209-38816228 None:intergenic 35.0%
! TGGTTGTTGTTGTTGTTGTA+AGG - chr2.3:38818105-38818124 MS.gene68706:intron 35.0%
!! AGGTTGATGTACTAATTTGC+TGG - chr2.3:38818211-38818230 MS.gene68706:intron 35.0%
!! ATTCTCATGTTTGTTGTTGC+AGG - chr2.3:38815422-38815441 MS.gene68706:intron 35.0%
!! TTCTCATGTTTGTTGTTGCA+GGG - chr2.3:38815423-38815442 MS.gene68706:intron 35.0%
!!! TGGCGGTTCTTCTAATTTTT+TGG - chr2.3:38816450-38816469 MS.gene68706:CDS 35.0%
!!! TTGATGTTTTGAGACTGAAC+AGG + chr2.3:38816133-38816152 None:intergenic 35.0%
AAATGTAGCAAGCCATTTGC+AGG - chr2.3:38815499-38815518 MS.gene68706:intron 40.0%
AACCATCATCTGTTGTTGCA+AGG - chr2.3:38816340-38816359 MS.gene68706:CDS 40.0%
AACCCTCAACATATCCAACT+TGG + chr2.3:38817026-38817045 None:intergenic 40.0%
AACCTAAACAATGGTGCAAC+TGG - chr2.3:38816223-38816242 MS.gene68706:CDS 40.0%
AATTCCCAATCAAGCCATCT+TGG + chr2.3:38816696-38816715 None:intergenic 40.0%
AATTCCTCTCATGTTCAAGC+CGG + chr2.3:38816089-38816108 None:intergenic 40.0%
ACCCTCAACATATCCAACTT+GGG + chr2.3:38817025-38817044 None:intergenic 40.0%
ACGAGAATTTCTCAACTTCG+GGG + chr2.3:38816951-38816970 None:intergenic 40.0%
AGAATTTGTCAATGCCCTAC+TGG + chr2.3:38816827-38816846 None:intergenic 40.0%
AGCAACCATGCTAGTATGAT+GGG + chr2.3:38815915-38815934 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr2.3:38817946-38817965 MS.gene68706:CDS 40.0%
ATTAGGGACCTTATCCTCAT+TGG + chr2.3:38815057-38815076 None:intergenic 40.0%
CTCAAAACATCAACAACTCC+TGG - chr2.3:38816140-38816159 MS.gene68706:CDS 40.0%
CTGTGAGTTCAAAGGATTGA+AGG + chr2.3:38816797-38816816 None:intergenic 40.0%
CTTCAATCCTTTGAACTCAC+AGG - chr2.3:38816795-38816814 MS.gene68706:intron 40.0%
GAACAAACCTGTGAGTTCAA+AGG + chr2.3:38816805-38816824 None:intergenic 40.0%
GAAGATGATGAAGAGAGTGA+AGG - chr2.3:38815182-38815201 MS.gene68706:intron 40.0%
GACGAGAATTTCTCAACTTC+GGG + chr2.3:38816952-38816971 None:intergenic 40.0%
GATGAGTGGTAAGACTAGAT+AGG - chr2.3:38817784-38817803 MS.gene68706:intron 40.0%
GCAGTTACTACAGCTACTAA+TGG - chr2.3:38814620-38814639 MS.gene68706:intron 40.0%
GGGATACAGTGATACAAGTA+TGG - chr2.3:38814902-38814921 MS.gene68706:intron 40.0%
GTCAGAAATCAGTCTTCTGT+TGG - chr2.3:38816394-38816413 MS.gene68706:CDS 40.0%
GTGGTAAGACTAGATAGGAT+AGG - chr2.3:38817789-38817808 MS.gene68706:intron 40.0%
TACCAGTTGCACCATTGTTT+AGG + chr2.3:38816228-38816247 None:intergenic 40.0%
TACTATAGGTGTTAGTGCAC+TGG - chr2.3:38818489-38818508 MS.gene68706:intron 40.0%
TCAAAGGAGAGATGAAGATG+GGG - chr2.3:38813899-38813918 MS.gene68706:CDS 40.0%
TCTTAGAGAGATGGATGACA+AGG + chr2.3:38818588-38818607 None:intergenic 40.0%
TCTTCTTACAACGGCATCTA+CGG + chr2.3:38817908-38817927 None:intergenic 40.0%
TGATAACAAGGCTTCCAATG+AGG - chr2.3:38815040-38815059 MS.gene68706:intron 40.0%
TGCACCCATTATGTCTTCTA+AGG + chr2.3:38817055-38817074 None:intergenic 40.0%
TGTTATGATGCATACCCTGT+TGG - chr2.3:38818707-38818726 MS.gene68706:CDS 40.0%
TTCCTTGCAACAACAGATGA+TGG + chr2.3:38816345-38816364 None:intergenic 40.0%
TTTCCAGACGAAAAGTCAAC+TGG + chr2.3:38816628-38816647 None:intergenic 40.0%
! AAACACAATCACTGCTGCTT+TGG - chr2.3:38816645-38816664 MS.gene68706:CDS 40.0%
! AAAGCACTAGCAGGAAATTC+AGG + chr2.3:38816520-38816539 None:intergenic 40.0%
! AACTTTTGCCCTATGAAGCT+GGG - chr2.3:38814327-38814346 MS.gene68706:intron 40.0%
! GTTGGATATGTTGAGGGTTT+TGG - chr2.3:38817027-38817046 MS.gene68706:intron 40.0%
! TAACTTTTGCCCTATGAAGC+TGG - chr2.3:38814326-38814345 MS.gene68706:intron 40.0%
! TCCCAAGTTGGATATGTTGA+GGG - chr2.3:38817021-38817040 MS.gene68706:intron 40.0%
! TCTGCTCTTATGTTTTCCTC+TGG - chr2.3:38817535-38817554 MS.gene68706:CDS 40.0%
! TGCTGCAGACTGTTTTACTT+TGG + chr2.3:38816867-38816886 None:intergenic 40.0%
! TTAGATTGGTTAAGCTCGGT+TGG + chr2.3:38816205-38816224 None:intergenic 40.0%
!! AAGCTTGAGCTTTGATTTGC+AGG + chr2.3:38816169-38816188 None:intergenic 40.0%
!! AAGGTCCCTAATATTTCTGG+TGG - chr2.3:38815065-38815084 MS.gene68706:intron 40.0%
!! ACAGTGCTGATCGGAATAAA+AGG - chr2.3:38815111-38815130 MS.gene68706:intron 40.0%
!! CCAAGACTTTGAGACAAGTT+GGG + chr2.3:38813974-38813993 None:intergenic 40.0%
!! GATGTACTAATTTGCTGGCA+TGG - chr2.3:38818216-38818235 MS.gene68706:intron 40.0%
!! TATTGGAGAACAGTGCTGAT+CGG - chr2.3:38815102-38815121 MS.gene68706:intron 40.0%
!! TCTCATGTTTGTTGTTGCAG+GGG - chr2.3:38815424-38815443 MS.gene68706:intron 40.0%
!!! ATGGCTTGCTACATTTTCTC+TGG + chr2.3:38815495-38815514 None:intergenic 40.0%
AACTCCCCATCATACTAGCA+TGG - chr2.3:38815907-38815926 MS.gene68706:CDS 45.0%
AAGAAGGAAGGAGCAAGATG+AGG - chr2.3:38815142-38815161 MS.gene68706:intron 45.0%
ACACCATTAGAGAGAGAGTG+GGG - chr2.3:38817822-38817841 MS.gene68706:intron 45.0%
ACTGGACTGTTAGCGATAAG+AGG + chr2.3:38816610-38816629 None:intergenic 45.0%
AGAAGAAACCTCGTGTGGTT+TGG - chr2.3:38815240-38815259 MS.gene68706:intron 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr2.3:38817930-38817949 MS.gene68706:CDS 45.0%
AGATGCCAAGATGGCTTGAT+TGG - chr2.3:38816688-38816707 MS.gene68706:CDS 45.0%
ATCAAGCCATCTTGGCATCT+CGG + chr2.3:38816688-38816707 None:intergenic 45.0%
ATCACAGAAGAAACCTCGTG+TGG - chr2.3:38815235-38815254 MS.gene68706:intron 45.0%
ATCGGGATACACATTATCCG+AGG - chr2.3:38814459-38814478 MS.gene68706:intron 45.0%
ATTTCCTGCTAGTGCTTTGC+CGG - chr2.3:38816522-38816541 MS.gene68706:CDS 45.0%
ATTTCTCAACTTCGGGGTAC+TGG + chr2.3:38816945-38816964 None:intergenic 45.0%
CAAGGCTTCCAATGAGGATA+AGG - chr2.3:38815046-38815065 MS.gene68706:intron 45.0%
CACAACAGACACACAATGCA+GGG - chr2.3:38816368-38816387 MS.gene68706:CDS 45.0%
CACGAATGATGCCTACAAGT+TGG - chr2.3:38816987-38817006 MS.gene68706:intron 45.0%
CACGCATACCAACAGGAAAA+CGG + chr2.3:38813932-38813951 None:intergenic 45.0%
CAGATAGTCACATGCACCAT+GGG + chr2.3:38814943-38814962 None:intergenic 45.0%
CAGCAACCATGCTAGTATGA+TGG + chr2.3:38815916-38815935 None:intergenic 45.0%
CATCATACTAGCATGGTTGC+TGG - chr2.3:38815914-38815933 MS.gene68706:CDS 45.0%
CATCTATTCCACTCATCCGA+AGG + chr2.3:38815964-38815983 None:intergenic 45.0%
CCCAACTTGTCTCAAAGTCT+TGG - chr2.3:38813971-38813990 MS.gene68706:intron 45.0%
CCTCATCTTCTCCAACTTGT+AGG + chr2.3:38817001-38817020 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr2.3:38817742-38817761 MS.gene68706:intron 45.0%
CGAGGTTTCTTCTGTGATGA+CGG + chr2.3:38815233-38815252 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr2.3:38817739-38817758 None:intergenic 45.0%
CTAAGCTCTTCAAGTCGAAC+AGG + chr2.3:38814972-38814991 None:intergenic 45.0%
CTGGACTGTTAGCGATAAGA+GGG + chr2.3:38816609-38816628 None:intergenic 45.0%
CTTCGGATGAGTGGAATAGA+TGG - chr2.3:38815962-38815981 MS.gene68706:CDS 45.0%
CTTCTTACAACGGCATCTAC+GGG + chr2.3:38817907-38817926 None:intergenic 45.0%
GACACCATTAGAGAGAGAGT+GGG - chr2.3:38817821-38817840 MS.gene68706:intron 45.0%
GAGCCAAAAGCTATCAAGCA+CGG + chr2.3:38814490-38814509 None:intergenic 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr2.3:38817940-38817959 MS.gene68706:CDS 45.0%
GAGGTTTCTTCTGTGATGAC+GGG + chr2.3:38815232-38815251 None:intergenic 45.0%
GATGCCAAGATGGCTTGATT+GGG - chr2.3:38816689-38816708 MS.gene68706:CDS 45.0%
GATTCTTACCTTCGGATGAG+TGG - chr2.3:38815953-38815972 MS.gene68706:CDS 45.0%
GCAACCATGCTAGTATGATG+GGG + chr2.3:38815914-38815933 None:intergenic 45.0%
GCTGATCGGAATAAAAGGCT+CGG - chr2.3:38815116-38815135 MS.gene68706:intron 45.0%
TAGCCACATCACTGATAACC+AGG + chr2.3:38814691-38814710 None:intergenic 45.0%
TCACAACAGACACACAATGC+AGG - chr2.3:38816367-38816386 MS.gene68706:CDS 45.0%
TCTGTTGGATCTGCTTCCTT+GGG - chr2.3:38816409-38816428 MS.gene68706:CDS 45.0%
TGAAGCAGTTGCAAATCCAG+TGG + chr2.3:38816275-38816294 None:intergenic 45.0%
TGACACCATTAGAGAGAGAG+TGG - chr2.3:38817820-38817839 MS.gene68706:intron 45.0%
TGACCTGGTTATCAGTGATG+TGG - chr2.3:38814685-38814704 MS.gene68706:intron 45.0%
TGTTAGCGATAAGAGGGCTT+TGG + chr2.3:38816603-38816622 None:intergenic 45.0%
TTATGCTCCGCGACAAAACT+GGG - chr2.3:38816732-38816751 MS.gene68706:intron 45.0%
TTCTGTTGGATCTGCTTCCT+TGG - chr2.3:38816408-38816427 MS.gene68706:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr2.3:38818086-38818105 None:intergenic 45.0%
! AAGGCTCGGTAAAAGAAGGA+AGG - chr2.3:38815130-38815149 MS.gene68706:intron 45.0%
! ACTCACAGGTTTGTTCCAGT+AGG - chr2.3:38816809-38816828 MS.gene68706:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr2.3:38818087-38818106 None:intergenic 45.0%
! CCTACAAGTTGGAGAAGATG+AGG - chr2.3:38816998-38817017 MS.gene68706:intron 45.0%
! CTCACAGGTTTGTTCCAGTA+GGG - chr2.3:38816810-38816829 MS.gene68706:intron 45.0%
! GTCCCAAGTTGGATATGTTG+AGG - chr2.3:38817020-38817039 MS.gene68706:intron 45.0%
! TATCCATCGAGCGGAGTTTT+CGG - chr2.3:38816046-38816065 MS.gene68706:CDS 45.0%
! TATTATACGTGTCGGCGTGT+AGG + chr2.3:38814386-38814405 None:intergenic 45.0%
! TTTCTCAACTTCGGGGTACT+GGG + chr2.3:38816944-38816963 None:intergenic 45.0%
!! AGTCCAGTTGACTTTTCGTC+TGG - chr2.3:38816622-38816641 MS.gene68706:CDS 45.0%
!! CAAGTCTCAAAAGCGTCAAG+AGG + chr2.3:38815707-38815726 None:intergenic 45.0%
!! GCCAAGACTTTGAGACAAGT+TGG + chr2.3:38813975-38813994 None:intergenic 45.0%
!! GCTTTGATTTGCAGGAATCC+AGG + chr2.3:38816161-38816180 None:intergenic 45.0%
!! GGAAGCCTTGTTATCATCCT+TGG + chr2.3:38815036-38815055 None:intergenic 45.0%
!! GTATTCAAGGGTGTTACCCA+TGG - chr2.3:38814924-38814943 MS.gene68706:intron 45.0%
!! TGTCCGTGCTTGATAGCTTT+TGG - chr2.3:38814484-38814503 MS.gene68706:intron 45.0%
!! TTTTCTGCCCAGTTTTGTCG+CGG + chr2.3:38816742-38816761 None:intergenic 45.0%
!!! CTCGTGTTTTGGCTGTAATC+CGG + chr2.3:38816769-38816788 None:intergenic 45.0%
AAGGAAGGAGCAAGATGAGG+AGG - chr2.3:38815145-38815164 MS.gene68706:intron 50.0%
AATGTGCCGAGATGCCAAGA+TGG - chr2.3:38816679-38816698 MS.gene68706:CDS 50.0%
ACTAGCATGGTTGCTGGACT+GGG - chr2.3:38815920-38815939 MS.gene68706:CDS 50.0%
ACTCCGCTCGATGGATATGA+CGG + chr2.3:38816043-38816062 None:intergenic 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr2.3:38817770-38817789 MS.gene68706:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr2.3:38818085-38818104 MS.gene68706:intron 50.0%
CCAGATAGTCACATGCACCA+TGG + chr2.3:38814944-38814963 None:intergenic 50.0%
CCATGGTGCATGTGACTATC+TGG - chr2.3:38814941-38814960 MS.gene68706:intron 50.0%
CGATGGATATGACGGCAATG+TGG + chr2.3:38816035-38816054 None:intergenic 50.0%
CTACCCCACTCTCTCTCTAA+TGG + chr2.3:38817828-38817847 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr2.3:38818082-38818101 None:intergenic 50.0%
GAGAAGATGAGGTCCCAAGT+TGG - chr2.3:38817009-38817028 MS.gene68706:intron 50.0%
GATCCTTCCAGATCTGGTTG+AGG + chr2.3:38816005-38816024 None:intergenic 50.0%
GCAAGAACACGCATACCAAC+AGG + chr2.3:38813939-38813958 None:intergenic 50.0%
GTCTGTGTCCCAGCTTCATA+GGG + chr2.3:38814338-38814357 None:intergenic 50.0%
GTTATGCTCCGCGACAAAAC+TGG - chr2.3:38816731-38816750 MS.gene68706:intron 50.0%
TACTAGCATGGTTGCTGGAC+TGG - chr2.3:38815919-38815938 MS.gene68706:CDS 50.0%
TATCAAGCACGGACACTCCT+CGG + chr2.3:38814479-38814498 None:intergenic 50.0%
TGATGTGGCTATGCCTGACA+TGG - chr2.3:38814700-38814719 MS.gene68706:intron 50.0%
TGTCGCGGAGCATAACTTGA+AGG + chr2.3:38816727-38816746 None:intergenic 50.0%
TGTCTGTGTCCCAGCTTCAT+AGG + chr2.3:38814339-38814358 None:intergenic 50.0%
TTCGATTAGGCATGTCCCAG+TGG - chr2.3:38814166-38814185 MS.gene68706:intron 50.0%
TTGCCGTCATATCCATCGAG+CGG - chr2.3:38816037-38816056 MS.gene68706:CDS 50.0%
TTGGCATCTCGGCACATTTC+TGG + chr2.3:38816677-38816696 None:intergenic 50.0%
TTTGGCACCTCAACCAGATC+TGG - chr2.3:38815995-38816014 MS.gene68706:CDS 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr2.3:38817750-38817769 MS.gene68706:intron 50.0%
! AGGTGTTAGTGCACTGGTGA+GGG - chr2.3:38818495-38818514 MS.gene68706:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr2.3:38818088-38818107 None:intergenic 50.0%
! GTCGTTGACCGTTTTCCTGT+TGG - chr2.3:38813921-38813940 MS.gene68706:CDS 50.0%
! TAGGTGTTAGTGCACTGGTG+AGG - chr2.3:38818494-38818513 MS.gene68706:intron 50.0%
! TGAAGGGACGACTCGTGTTT+TGG + chr2.3:38816780-38816799 None:intergenic 50.0%
!! CACAATCACTGCTGCTTTGG+AGG - chr2.3:38816648-38816667 MS.gene68706:CDS 50.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr2.3:38818074-38818093 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr2.3:38818073-38818092 MS.gene68706:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr2.3:38818080-38818099 MS.gene68706:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr2.3:38817762-38817781 MS.gene68706:intron 55.0%
CTACCGAAAACTCCGCTCGA+TGG + chr2.3:38816052-38816071 None:intergenic 55.0%
GACACGTGTCTGACACCACT+GGG + chr2.3:38814184-38814203 None:intergenic 55.0%
GCACCTCAACCAGATCTGGA+AGG - chr2.3:38815999-38816018 MS.gene68706:CDS 55.0%
GCTTGCGATCCTTCCAGATC+TGG + chr2.3:38816011-38816030 None:intergenic 55.0%
GGTAGGCTGAATTCTCCAGC+CGG - chr2.3:38816067-38816086 MS.gene68706:CDS 55.0%
GTGGCTATGCCTGACATGGA+TGG - chr2.3:38814704-38814723 MS.gene68706:intron 55.0%
TCAGGAGACCAAACCACACG+AGG + chr2.3:38815251-38815270 None:intergenic 55.0%
TGGGACACAGACACGAACAG+CGG - chr2.3:38814346-38814365 MS.gene68706:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr2.3:38818074-38818093 MS.gene68706:intron 55.0%
! AGGGAGTGCAGATGGAGATG+AGG - chr2.3:38815202-38815221 MS.gene68706:intron 55.0%
! CATACCGGCAAAGCACTAGC+AGG + chr2.3:38816529-38816548 None:intergenic 55.0%
! CATCGAGCGGAGTTTTCGGT+AGG - chr2.3:38816050-38816069 MS.gene68706:CDS 55.0%
! GAGAGTGAAGGGAGTGCAGA+TGG - chr2.3:38815194-38815213 MS.gene68706:intron 55.0%
CCTCTCATGTTCAAGCCGGC+TGG + chr2.3:38816085-38816104 None:intergenic 60.0%
CGACACGTGTCTGACACCAC+TGG + chr2.3:38814185-38814204 None:intergenic 60.0%
CGGCGTGTAGGTGTCTGTGT+CGG + chr2.3:38814374-38814393 None:intergenic 60.0%
GGCGTGTAGGTGTCTGTGTC+GGG + chr2.3:38814373-38814392 None:intergenic 60.0%
! AGCATGGTTGCTGGACTGGG+CGG - chr2.3:38815923-38815942 MS.gene68706:CDS 60.0%
!! CCAGCCGGCTTGAACATGAG+AGG - chr2.3:38816082-38816101 MS.gene68706:CDS 60.0%
!! GTGTCGGTGTCGGACGACAT+CGG - chr2.3:38814441-38814460 MS.gene68706:intron 60.0%
!! TGTCGGTGTCGGACGACATC+GGG - chr2.3:38814442-38814461 MS.gene68706:intron 60.0%
! ATGGTTGCTGGACTGGGCGG+TGG - chr2.3:38815926-38815945 MS.gene68706:CDS 65.0%
!! GGGGTACTGGGCAACTGACG+TGG + chr2.3:38816932-38816951 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 38813885 38818742 38813885 ID=MS.gene68706
chr2.3 mRNA 38813885 38818742 38813885 ID=MS.gene68706.t1;Parent=MS.gene68706
chr2.3 exon 38818604 38818742 38818604 ID=MS.gene68706.t1.exon1;Parent=MS.gene68706.t1
chr2.3 CDS 38818604 38818742 38818604 ID=cds.MS.gene68706.t1;Parent=MS.gene68706.t1
chr2.3 exon 38817851 38818003 38817851 ID=MS.gene68706.t1.exon2;Parent=MS.gene68706.t1
chr2.3 CDS 38817851 38818003 38817851 ID=cds.MS.gene68706.t1;Parent=MS.gene68706.t1
chr2.3 exon 38817310 38817732 38817310 ID=MS.gene68706.t1.exon3;Parent=MS.gene68706.t1
chr2.3 CDS 38817310 38817732 38817310 ID=cds.MS.gene68706.t1;Parent=MS.gene68706.t1
chr2.3 exon 38817107 38817183 38817107 ID=MS.gene68706.t1.exon4;Parent=MS.gene68706.t1
chr2.3 CDS 38817107 38817183 38817107 ID=cds.MS.gene68706.t1;Parent=MS.gene68706.t1
chr2.3 exon 38815541 38816746 38815541 ID=MS.gene68706.t1.exon5;Parent=MS.gene68706.t1
chr2.3 CDS 38815541 38816746 38815541 ID=cds.MS.gene68706.t1;Parent=MS.gene68706.t1
chr2.3 exon 38813885 38813956 38813885 ID=MS.gene68706.t1.exon6;Parent=MS.gene68706.t1
chr2.3 CDS 38813885 38813956 38813885 ID=cds.MS.gene68706.t1;Parent=MS.gene68706.t1
Gene Sequence

>MS.gene68706

ATGGGTGTGGAGAATCAAAGGAGAGATGAAGATGGGGTCGTTGACCGTTTTCCTGTTGGTATGCGTGTTCTTGCTGTTGATGACAACCCAACTTGTCTCAAAGTCTTGGCTAAACTGCTTGCTGAATGCAAATATCATGGTTAGTTACTTACTCATAATTCTTATGTTTGTGCAATTTAACCTTAATTTTATGTTTTAGTTCAATTGTAACTACATGCTGTGTTTCCAGCCTTATTACTTTAGAACTTAGTATTTTGCTCTATGAAGCACAGACACACTATTTCGATTAGGCATGTCCCAGTGGTGTCAGACACGTGTCGTGTCCGACACTGACACATATAGTTACACCGAATTATATGATTTTCTCAAATTATTAACGGTGTCGGCGTGTTCGTGTCCGTATCCGTGCTTCATAAATTTTGCTACATGTGTCAAAGTTGATAACTTTTGCCCTATGAAGCTGGGACACAGACACGAACAGCGGACCCGACACAGACACCTACACGCCGACACGTATAATAATTTAAGAAAATGACATAATTAAGTGTAATAATTTGTGTCGGTGTCGGACGACATCGGGATACACATTATCCGAGGAGTGTCCGTGCTTGATAGCTTTTGGCTCAAAATTGTTTTTTTTATTTTTTATTTTATGTTATTATATATTTTTTTTTTAGGTTTTTGGCTTGTTACATTGCTATTAGAATTTAGGTTTGATTTGTGGTTGTTGTTGTTGCAGTTACTACAGCTACTAATGGATTTGATGCACTAAAAATGTTGAGGGAAAACAGAAAGAACTATGACCTGGTTATCAGTGATGTGGCTATGCCTGACATGGATGGATTTAAGTTGCTTGAATTGGTAGGACTTGAAATGGACTTACCTGTCATCAGTAAGTTCATACATATGCTTTTATTTTGTTGTTGAGCATTCTTCTATTTACAATAACGGGTTGAATTGAATCGGTTTATTGACTCGGAACTATTTTCTTCGCTTTTATCTTGTTCTAGTGTTGTCGGGATACAGTGATACAAGTATGGTATTCAAGGGTGTTACCCATGGTGCATGTGACTATCTGGTGAAACCTGTTCGACTTGAAGAGCTTAGAAACATATGGCAACATGTAATCCGAAAGAAAAAAACTAATTCCAAGGATGATAACAAGGCTTCCAATGAGGATAAGGTCCCTAATATTTCTGGTGGAAGCAATCAGAACATATTGGAGAACAGTGCTGATCGGAATAAAAGGCTCGGTAAAAGAAGGAAGGAGCAAGATGAGGAGGAGAAAGAAGAAGAAGAAGATGATGAAGAGAGTGAAGGGAGTGCAGATGGAGATGAGGATGACCCGTCATCACAGAAGAAACCTCGTGTGGTTTGGTCTCCTGATTTGCATAAGAAATTTGTTTGTGCTGTTAATCAACTTGGTGCAGACAGTAAGTTTTTGATAGTGATGATATAACTTAATCGTTTTGCTTGAGTTCAGTGCTTAACAACTTCATATGTAGACATGGTTGCAAAAATTTCCAATAAAAGATTTATTCTCATGTTTGTTGTTGCAGGGGCTGTTCCGAAGAAAATACTTGAGCTGATGAATATTGAAGGGATTACCAGAGAAAATGTAGCAAGCCATTTGCAGGTCTTTATTCTTGCCTTTGTAGTCACCATAATCGTTCTGTTTAGCCTTTTCCAAATCATGAAATTATTTTTTAATTTTTTTTATAGATTTTATGAGCTTAAAATCTTGTTTAATAGAAGTTTCGTGAAAAAATAAAGTCCAAATGATGAATTAACATTTATCAAAGTGTTGAAAACATTACATCCTCTTGACGCTTTTGAGACTTGAAACACATGTTTTCAAGTCCTACTGACTAGACAAGTTTATTCAAGCATAGATGTATAACTTTGTACAGTGAAACCTCTTCATTTTTATGAAGAAATATACTTTTTTAGTATTGAGATGATCACAGATGAAGCTCATTTTCGTTTTGTATTGCAGAAATATAGACTCTATCTGAAAAAGGCAACTCCCCATCATACTAGCATGGTTGCTGGACTGGGCGGTGGTAATGATTCTTACCTTCGGATGAGTGGAATAGATGGATATGCAGACTTTGGCACCTCAACCAGATCTGGAAGGATCGCAAGCACCACATTGCCGTCATATCCATCGAGCGGAGTTTTCGGTAGGCTGAATTCTCCAGCCGGCTTGAACATGAGAGGAATTAATTCTTCAACACTGATTCAGCCTGTTCAGTCTCAAAACATCAACAACTCCTGGATTCCTGCAAATCAAAGCTCAAGCTTATTACATGGCGTTCCAACCGAGCTTAACCAATCTAACCTAAACAATGGTGCAACTGGTATATCGCAGTTAAATCAAATAGATTCCACTGGATTTGCAACTGCTTCAGACTTTCAAGATAGTAGGGCTATTACCAGTTCTAATCAAGTCTCAAACCATCATCTGTTGTTGCAAGGAAATTCACAACAGACACACAATGCAGGGTCAGTCAGAAATCAGTCTTCTGTTGGATCTGCTTCCTTGGGAAACAGAAACATTACTATTGGCGGTTCTTCTAATTTTTTGGATTATAATCGGTGTAGTGAAAACTGGCAAAGTCAAGCTCAGTTACCTGAATTTCCTGCTAGTGCTTTGCCGGTATGCAAGTCTTTCAATAACGACCAACTGCCTCTCAATAACATTACTGCTTTTAACCAAAGCCCTCTTATCGCTAACAGTCCAGTTGACTTTTCGTCTGGAAACACAATCACTGCTGCTTTGGAGGAAGCCAGAAATGTGCCGAGATGCCAAGATGGCTTGATTGGGAATTTTATACAGCCTTCAAGTTATGCTCCGCGACAAAACTGGGCAGAAAATAAACCGGATTACAGCCAAAACACGAGTCGTCCCTTCAATCCTTTGAACTCACAGGTTTGTTCCAGTAGGGCATTGACAAATTCTGCGTCTCACAATATCAACCAAAGTAAAACAGTCTGCAGCAATAGAGTTGATGCATCTTTTGTTGATCATGTATATGGCGCTTCCACGTCAGTTGCCCAGTACCCCGAAGTTGAGAAATTCTCGTCAGACGTACAAGTCAACACGAATGATGCCTACAAGTTGGAGAAGATGAGGTCCCAAGTTGGATATGTTGAGGGTTTTGGAACCTTAGAAGACATAATGGGTGCAATAGTCAAAAGGGTATGATTAAATTGACTGCTTCTGTTGCACAGATTTTAAAATGAAACTAACAAATTTTTTCTTCTTTACACTCCTTTTTTCTTGCTCTAGTCTACTACATTATTTTTTTGGATTGAAAGTTTAGTCTGCGGTATTATGACACAACTTAGTCGCGTTATCATTTTATTTAGTTTAGTTTAGTCGACGGTATTTGAAACATCTTAGCCGCGTTATCATTTTATTTATTTTGGTATAACGGTTTTATGAATTTTGAATACTTCTTTTGGATGCTTGTGTATCTAGTATTATTTCTTTGGTTTATAACTTCTATCTCAACCATAGTCTGCATAATTTCAATATCAGGTATCTACCTTTTAGAAATAATGCAAAAGAATTTATGGACAAATTCAGCAGTTACAAAAAATGCTACCAAATGTAGACAAATTTGCATTTTTCTAAATCATAATCATCTGCTCTTATGTTTTCCTCTGGTTACATACACCTTTATTGTCTTTTTATTTTAACTTAATTGTATGCAAGGTTGTACAAGTACAATGTAATTGTTCTTCAATAACTATGAAACAGGTTAAAATGAAAATGCAAAAAAAAAAAAAAAAAAGTTTGTTCTATTAATTTTGTTTAAAGGAATGATGAATGTAATTTAGACGGTCCAACACGAGAGTAAAGTAAGCGTAGCGGAGATGAGGATGTTGCGTTGGATGAGTGGTAAGACTAGATAGGATAGGATTAGGAATGACACCATTAGAGAGAGAGTGGGGTAGCACCTATAGTAGAAAAGTTGGTAGAAAATAGGCTTAGATGGTTTGGACATGTAGAGCCCGTAGATGCCGTTGTAAGAAGAGTAGATCAAATGGAGGAGAGTCAGGTTAAAAGAGGTAGAGGAAGACCTAAGAAAACCATTAGAGAAACCATTCGAAAAGATTTAGAGGTCAATGAGTTGGATCCAAATATGGTTTTTGATAGAACACTATGGCGTCATTTGATCCATGTAGCCGACCCCACTTAGTGGGATAAGGCTTGGTTGTTGTTGTTGTTGTAAGGGGATCAAATGTTTATAATAATTAACCCTGCAAGATAGTTTCAAATAATGGATTGGATTGGATTGCAAGCACCACTAATATATAAGGTTGATGTACTAATTTGCTGGCATGGATTGACTTTTTTGTTGAATTGAGTACTTTTTAACCATTATATCTACCCTTTTATCTTTCATGTTAAGATCATATCTCTCAGGTATTGAGAGTTTAATATCTTAACATACAACATGTTTTAAATCACATTTTTTGAAACTGTTTACATTAACAACATGATTATACGTCAATGTACACGAGTGTTATTGTTTATTATATTGTTGTGATTTTGTGCTAAATGATGTGGTTTTAACTTGTTCTATAATGTTAGATACTATAGGTGTTAGTGCACTGGTGAGGGTGACCATATAGCTTTTTGTAATTTTAAGGGATATATTTGAATTCTCACCTTGGATTTGAATGTATGTCCTTGTCATCCATCTCTCTAAGACATTGTAAGAAGATACTGTGCGTTGTTTTATTTCATTCTTTCATGATAGACTTTGTAATGCAGGAGCAAATTGAGATGACATTGATGGATGGAGAAATGTGTTATGATGCATACCCTGTTGGATCATGCATTTGA
Protein sequence

>MS.gene68706.t1

MGVENQRRDEDGVVDRFPVGMRVLAVDDNPTCLKVLAKLLAECKYHVTTATNGFDALKMLRENRKNYDLVISDVAMPDMDGFKLLELVGLEMDLPVIMLSGYSDTSMVFKGVTHGACDYLVKPVRLEELRNIWQHVIRKKKTNSKDDNKASNEDKVPNISGGSNQNILENSADRNKRLGKRRKEQDEEEKEEEEDDEESEGSADGDEDDPSSQKKPRVVWSPDLHKKFVCAVNQLGADRAVPKKILELMNIEGITRENVASHLQKYRLYLKKATPHHTSMVAGLGGGNDSYLRMSGIDGYADFGTSTRSGRIASTTLPSYPSSGVFGRLNSPAGLNMRGINSSTLIQPVQSQNINNSWIPANQSSSLLHGVPTELNQSNLNNGATGISQLNQIDSTGFATASDFQDSRAITSSNQVSNHHLLLQGNSQQTHNAGSVRNQSSVGSASLGNRNITIGGSSNFLDYNRCSENWQSQAQLPEFPASALPVCKSFNNDQLPLNNITAFNQSPLIANSPVDFSSGNTITAALEEARNVPRCQDGLIGNFIQPSSYAPRQNWAENKPDYSQNTSRPFNPLNSQVCSSRALTNSASHNINQSKTVCSNRVDASFVDHVYGASTSVAQYPEVEKFSSDVQVNTNDAYKLEKMRSQVGYVEGFGTLEDIMGAIVKREQIEMTLMDGEMCYDAYPVGSCI