Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68870.t1 | XP_003610487.1 | 88.2 | 228 | 16 | 1 | 1 | 228 | 1 | 217 | 7.20E-67 | 263.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68870.t1 | G7JKF7 | 88.2 | 228 | 16 | 1 | 1 | 228 | 1 | 217 | 5.2e-67 | 263.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058853 | MS.gene68870 | 0.809759 | 1.61E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68870.t1 | MTR_4g132760 | 91.228 | 228 | 9 | 4 | 1 | 228 | 1 | 217 | 1.19e-136 | 382 |
| MS.gene68870.t1 | MTR_2g025080 | 53.589 | 209 | 66 | 5 | 1 | 201 | 1 | 186 | 3.47e-58 | 182 |
| MS.gene68870.t1 | MTR_8g013650 | 83.673 | 49 | 8 | 0 | 180 | 228 | 186 | 234 | 1.65e-26 | 102 |
| MS.gene68870.t1 | MTR_7g056407 | 44.231 | 104 | 39 | 2 | 143 | 228 | 237 | 339 | 7.27e-21 | 89.7 |
| MS.gene68870.t1 | MTR_3g065180 | 60.000 | 50 | 20 | 0 | 179 | 228 | 291 | 340 | 4.53e-17 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68870.t1 | AT4G03965 | 46.667 | 240 | 85 | 6 | 1 | 228 | 1 | 209 | 2.05e-58 | 184 |
| MS.gene68870.t1 | AT4G22250 | 48.624 | 218 | 76 | 7 | 21 | 228 | 23 | 214 | 7.35e-54 | 172 |
| MS.gene68870.t1 | AT1G62370 | 40.506 | 237 | 99 | 7 | 1 | 228 | 1 | 204 | 1.51e-45 | 150 |
| MS.gene68870.t1 | AT3G25030 | 52.542 | 118 | 46 | 2 | 118 | 228 | 96 | 210 | 1.96e-34 | 122 |
| MS.gene68870.t1 | AT3G25030 | 52.542 | 118 | 46 | 2 | 118 | 228 | 136 | 250 | 8.40e-34 | 122 |
| MS.gene68870.t1 | AT3G25030 | 52.542 | 118 | 46 | 2 | 118 | 228 | 136 | 250 | 8.40e-34 | 122 |
| MS.gene68870.t1 | AT3G25030 | 52.542 | 118 | 46 | 2 | 118 | 228 | 136 | 250 | 8.40e-34 | 122 |
| MS.gene68870.t1 | AT4G13100 | 49.612 | 129 | 32 | 4 | 118 | 228 | 146 | 259 | 3.12e-29 | 110 |
| MS.gene68870.t1 | AT4G13100 | 49.612 | 129 | 32 | 4 | 118 | 228 | 146 | 259 | 3.12e-29 | 110 |
| MS.gene68870.t1 | AT4G13100 | 49.612 | 129 | 32 | 4 | 118 | 228 | 146 | 259 | 3.12e-29 | 110 |
| MS.gene68870.t1 | AT4G13100 | 49.612 | 129 | 32 | 4 | 118 | 228 | 146 | 259 | 3.12e-29 | 110 |
| MS.gene68870.t1 | AT4G13100 | 49.612 | 129 | 32 | 4 | 118 | 228 | 143 | 256 | 3.61e-29 | 110 |
| MS.gene68870.t1 | AT4G13100 | 48.837 | 129 | 30 | 4 | 118 | 228 | 146 | 256 | 4.56e-29 | 110 |
| MS.gene68870.t1 | AT4G13100 | 48.837 | 129 | 30 | 4 | 118 | 228 | 146 | 256 | 4.56e-29 | 110 |
| MS.gene68870.t1 | AT4G13100 | 48.837 | 129 | 30 | 4 | 118 | 228 | 155 | 265 | 6.75e-29 | 109 |
| MS.gene68870.t1 | AT3G07120 | 59.184 | 49 | 20 | 0 | 180 | 228 | 312 | 360 | 7.07e-17 | 78.6 |
Find 76 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGTTCGTTGCGGATAAT+TGG | 0.249983 | 8.2:+1497207 | None:intergenic |
| GTTTCACATTCCGGTTCAAC+TGG | 0.280636 | 8.2:+1497090 | None:intergenic |
| GTGGTGGGTTCGTCTGGTTC+TGG | 0.300899 | 8.2:-1497063 | MS.gene68870:CDS |
| TTCTTTGAGACTACGTCTTC+TGG | 0.310742 | 8.2:+1497281 | None:intergenic |
| TGGGTTGTTGTGGTGCCACC+TGG | 0.326153 | 8.2:-1497239 | MS.gene68870:CDS |
| GAGGCTAGTGGCGGAGGCGG+AGG | 0.344398 | 8.2:-1496988 | MS.gene68870:CDS |
| ACTCCGGTGGTGGGTTCGTC+TGG | 0.370885 | 8.2:-1497069 | MS.gene68870:CDS |
| CCTTGCGGCGGCGTTGGCGG+CGG | 0.381107 | 8.2:-1497034 | MS.gene68870:CDS |
| CAAATGGACAGTTTAGATTC+AGG | 0.383260 | 8.2:-1497309 | MS.gene68870:CDS |
| CGCTTCAGATTCACCGGTAT+GGG | 0.387954 | 8.2:-1497258 | MS.gene68870:CDS |
| CGGTTTATTAACCGAACAAA+TGG | 0.401011 | 8.2:-1497325 | MS.gene68870:CDS |
| CCGCCGCCAACGCCGCCGCA+AGG | 0.401311 | 8.2:+1497034 | None:intergenic |
| CATTCCGGTTCAACTGGGTT+CGG | 0.404037 | 8.2:+1497096 | None:intergenic |
| ATCTAAACTGTCCATTTGTT+CGG | 0.404178 | 8.2:+1497314 | None:intergenic |
| GAACCTTGCGGCGGCGTTGG+CGG | 0.404942 | 8.2:-1497037 | MS.gene68870:CDS |
| TTCGGTTAATAAACCGAGAA+TGG | 0.411730 | 8.2:+1497332 | None:intergenic |
| GCTAGTGGCGGAGGCGGAGG+CGG | 0.412142 | 8.2:-1496985 | MS.gene68870:CDS |
| TCAACTCGGTCTCATATTGC+AGG | 0.414710 | 8.2:-1497385 | MS.gene68870:CDS |
| AGAGAATCAAGAACCATTCT+CGG | 0.424957 | 8.2:-1497345 | MS.gene68870:CDS |
| TTCAGTGTGCTGCGTGTGCA+TGG | 0.441328 | 8.2:-1496860 | MS.gene68870:CDS |
| GGCGGAGGCGGAGGCGGAGA+AGG | 0.447052 | 8.2:-1496979 | MS.gene68870:CDS |
| ACGGAGGAGGCTAGTGGCGG+AGG | 0.451095 | 8.2:-1496994 | MS.gene68870:CDS |
| AGATCCGAACCCAGTTGAAC+CGG | 0.458025 | 8.2:-1497100 | MS.gene68870:CDS |
| AATGAACCTTGCGGCGGCGT+TGG | 0.463100 | 8.2:-1497040 | MS.gene68870:CDS |
| ACCACCGGAGTTTCACATTC+CGG | 0.463442 | 8.2:+1497081 | None:intergenic |
| GAGGAGGCTAGTGGCGGAGG+CGG | 0.471756 | 8.2:-1496991 | MS.gene68870:CDS |
| TAATGCTGGTGCGGTGGTTG+TGG | 0.471853 | 8.2:-1496893 | MS.gene68870:CDS |
| TGGCGGCGGAGCGGCAAATG+AGG | 0.476419 | 8.2:-1497020 | MS.gene68870:CDS |
| GAGAATAGAACGATTACAAA+GGG | 0.479329 | 8.2:+1496747 | None:intergenic |
| CGGCGGCGTTGGCGGCGGAG+CGG | 0.486064 | 8.2:-1497029 | MS.gene68870:CDS |
| ACGCTTCAGATTCACCGGTA+TGG | 0.495940 | 8.2:-1497259 | MS.gene68870:CDS |
| GCTGGTGCGGTGGTTGTGGA+AGG | 0.512004 | 8.2:-1496889 | MS.gene68870:CDS |
| AGTTTCGTTGATGAAACTGT+TGG | 0.512656 | 8.2:-1496941 | MS.gene68870:CDS |
| CAACAACAGCAAAACGAAGA+AGG | 0.516607 | 8.2:-1497171 | MS.gene68870:CDS |
| GATGAAACTGTTGGAGGAAA+CGG | 0.519664 | 8.2:-1496932 | MS.gene68870:CDS |
| TTCGTTGATGAAACTGTTGG+AGG | 0.522016 | 8.2:-1496938 | MS.gene68870:CDS |
| GGAATGTGAAACTCCGGTGG+TGG | 0.529577 | 8.2:-1497079 | MS.gene68870:CDS |
| ACTGTTGGAGGAAACGGAAG+TGG | 0.532838 | 8.2:-1496926 | MS.gene68870:CDS |
| GCAAATGAGGGTAACGGAGG+AGG | 0.537713 | 8.2:-1497007 | MS.gene68870:CDS |
| GGCACCACAACAACCCATAC+CGG | 0.553017 | 8.2:+1497245 | None:intergenic |
| GGGTTGTTGTGGTGCCACCT+GGG | 0.563855 | 8.2:-1497238 | MS.gene68870:CDS |
| CGAAGAAGGTGGAGCTACAG+TGG | 0.576742 | 8.2:-1497157 | MS.gene68870:CDS |
| CCGGTCAATATGAGTCAACT+CGG | 0.576822 | 8.2:-1497399 | None:intergenic |
| TTTCACATTCCGGTTCAACT+GGG | 0.578697 | 8.2:+1497091 | None:intergenic |
| GAACCAGACGAACCCACCAC+CGG | 0.580808 | 8.2:+1497066 | None:intergenic |
| GTGTGCATGGGAAGAAAGAA+AGG | 0.583290 | 8.2:-1496847 | MS.gene68870:CDS |
| GTGGAAAATGAGAGTAATGC+TGG | 0.585452 | 8.2:-1496907 | MS.gene68870:CDS |
| AAAGAACGCTTCAGATTCAC+CGG | 0.587827 | 8.2:-1497264 | MS.gene68870:CDS |
| GGCGGCGGAGCGGCAAATGA+GGG | 0.590263 | 8.2:-1497019 | MS.gene68870:CDS |
| GCGGAGAAGGAGCGACGCCG+TGG | 0.591678 | 8.2:-1496966 | MS.gene68870:CDS |
| TCAGTGTGCTGCGTGTGCAT+GGG | 0.593233 | 8.2:-1496859 | MS.gene68870:CDS |
| CGAGAATAGAACGATTACAA+AGG | 0.598192 | 8.2:+1496746 | None:intergenic |
| CTGGTGCGGTGGTTGTGGAA+GGG | 0.603127 | 8.2:-1496888 | MS.gene68870:CDS |
| TTCACCGGTATGGGTTGTTG+TGG | 0.607708 | 8.2:-1497249 | MS.gene68870:CDS |
| GGAGCGGCAAATGAGGGTAA+CGG | 0.608763 | 8.2:-1497013 | MS.gene68870:CDS |
| CAACAGCAAAACGAAGAAGG+TGG | 0.612798 | 8.2:-1497168 | MS.gene68870:CDS |
| GTAACGGAGGAGGCTAGTGG+CGG | 0.613385 | 8.2:-1496997 | MS.gene68870:CDS |
| TGAACCGGAATGTGAAACTC+CGG | 0.616093 | 8.2:-1497085 | MS.gene68870:CDS |
| AGGGTAACGGAGGAGGCTAG+TGG | 0.623269 | 8.2:-1497000 | MS.gene68870:CDS |
| GTTCGTTGCGGATAATTGGA+CGG | 0.625036 | 8.2:+1497211 | None:intergenic |
| TTTGAGACTACGTCTTCTGG+TGG | 0.634831 | 8.2:+1497284 | None:intergenic |
| GAATGTGAAACTCCGGTGGT+GGG | 0.635237 | 8.2:-1497078 | MS.gene68870:CDS |
| GTTGATGATGATGTTCGTTG+CGG | 0.636681 | 8.2:+1497199 | None:intergenic |
| GCGGCAAATGAGGGTAACGG+AGG | 0.646014 | 8.2:-1497010 | MS.gene68870:CDS |
| GATAATTGGACGGAAAACCC+AGG | 0.649559 | 8.2:+1497221 | None:intergenic |
| AGGGAACTGTGGTTGAATCG+AGG | 0.655246 | 8.2:-1496778 | MS.gene68870:CDS |
| TTCATCAACGAAACTCTCCA+CGG | 0.677889 | 8.2:+1496949 | None:intergenic |
| TGAGAGTAATGCTGGTGCGG+TGG | 0.688076 | 8.2:-1496899 | MS.gene68870:CDS |
| GAGTGTGTTCGAGGGAACTG+TGG | 0.692857 | 8.2:-1496789 | MS.gene68870:CDS |
| TTCTGGAATGAACCTTGCGG+CGG | 0.694080 | 8.2:-1497046 | MS.gene68870:CDS |
| AAATGAGAGTAATGCTGGTG+CGG | 0.699341 | 8.2:-1496902 | MS.gene68870:CDS |
| GGTGCAGCGTTCATACCGTG+TGG | 0.706510 | 8.2:-1496826 | MS.gene68870:CDS |
| AGAATAGAACGATTACAAAG+GGG | 0.720178 | 8.2:+1496748 | None:intergenic |
| TGGTTCTGGAATGAACCTTG+CGG | 0.740354 | 8.2:-1497049 | MS.gene68870:CDS |
| ACCGGAATGTGAAACTCCGG+TGG | 0.748395 | 8.2:-1497082 | MS.gene68870:CDS |
| AATTGGACGGAAAACCCAGG+TGG | 0.782059 | 8.2:+1497224 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AGAATAGAACGATTACAAAG+GGG | + | chr8.2:1497371-1497390 | None:intergenic | 30.0% | |
| ATCTAAACTGTCCATTTGTT+CGG | + | chr8.2:1496805-1496824 | None:intergenic | 30.0% | |
| GAGAATAGAACGATTACAAA+GGG | + | chr8.2:1497372-1497391 | None:intergenic | 30.0% | |
| AGAGAATCAAGAACCATTCT+CGG | - | chr8.2:1496771-1496790 | MS.gene68870:CDS | 35.0% | |
| CAAATGGACAGTTTAGATTC+AGG | - | chr8.2:1496807-1496826 | MS.gene68870:CDS | 35.0% | |
| CGAGAATAGAACGATTACAA+AGG | + | chr8.2:1497373-1497392 | None:intergenic | 35.0% | |
| CGGTTTATTAACCGAACAAA+TGG | - | chr8.2:1496791-1496810 | MS.gene68870:CDS | 35.0% | |
| TTCGGTTAATAAACCGAGAA+TGG | + | chr8.2:1496787-1496806 | None:intergenic | 35.0% | |
| ! | AGTTTCGTTGATGAAACTGT+TGG | - | chr8.2:1497175-1497194 | MS.gene68870:CDS | 35.0% |
| AAAGAACGCTTCAGATTCAC+CGG | - | chr8.2:1496852-1496871 | MS.gene68870:CDS | 40.0% | |
| AAATGAGAGTAATGCTGGTG+CGG | - | chr8.2:1497214-1497233 | MS.gene68870:CDS | 40.0% | |
| CAACAACAGCAAAACGAAGA+AGG | - | chr8.2:1496945-1496964 | MS.gene68870:CDS | 40.0% | |
| GATGAAACTGTTGGAGGAAA+CGG | - | chr8.2:1497184-1497203 | MS.gene68870:CDS | 40.0% | |
| GTGGAAAATGAGAGTAATGC+TGG | - | chr8.2:1497209-1497228 | MS.gene68870:CDS | 40.0% | |
| TGATGTTCGTTGCGGATAAT+TGG | + | chr8.2:1496912-1496931 | None:intergenic | 40.0% | |
| TTCATCAACGAAACTCTCCA+CGG | + | chr8.2:1497170-1497189 | None:intergenic | 40.0% | |
| TTTCACATTCCGGTTCAACT+GGG | + | chr8.2:1497028-1497047 | None:intergenic | 40.0% | |
| ! | TTCGTTGATGAAACTGTTGG+AGG | - | chr8.2:1497178-1497197 | MS.gene68870:CDS | 40.0% |
| ! | TTTTTGCAGAGTGTGTTCGA+GGG | - | chr8.2:1497319-1497338 | MS.gene68870:CDS | 40.0% |
| !! | GTTGATGATGATGTTCGTTG+CGG | + | chr8.2:1496920-1496939 | None:intergenic | 40.0% |
| !! | TTCTTTGAGACTACGTCTTC+TGG | + | chr8.2:1496838-1496857 | None:intergenic | 40.0% |
| CAACAGCAAAACGAAGAAGG+TGG | - | chr8.2:1496948-1496967 | MS.gene68870:CDS | 45.0% | |
| GATAATTGGACGGAAAACCC+AGG | + | chr8.2:1496898-1496917 | None:intergenic | 45.0% | |
| GTGTGCATGGGAAGAAAGAA+AGG | - | chr8.2:1497269-1497288 | MS.gene68870:CDS | 45.0% | |
| GTTCGTTGCGGATAATTGGA+CGG | + | chr8.2:1496908-1496927 | None:intergenic | 45.0% | |
| GTTTCACATTCCGGTTCAAC+TGG | + | chr8.2:1497029-1497048 | None:intergenic | 45.0% | |
| TCAACTCGGTCTCATATTGC+AGG | - | chr8.2:1496731-1496750 | MS.gene68870:CDS | 45.0% | |
| TGAACCGGAATGTGAAACTC+CGG | - | chr8.2:1497031-1497050 | MS.gene68870:CDS | 45.0% | |
| ! | CTGCAAAAAGTGTGTCCACA+CGG | + | chr8.2:1497308-1497327 | None:intergenic | 45.0% |
| ! | CTTTTTGCAGAGTGTGTTCG+AGG | - | chr8.2:1497318-1497337 | MS.gene68870:CDS | 45.0% |
| ! | TTTGAGACTACGTCTTCTGG+TGG | + | chr8.2:1496835-1496854 | None:intergenic | 45.0% |
| !! | TGGTTCTGGAATGAACCTTG+CGG | - | chr8.2:1497067-1497086 | MS.gene68870:CDS | 45.0% |
| AATTGGACGGAAAACCCAGG+TGG | + | chr8.2:1496895-1496914 | None:intergenic | 50.0% | |
| ACCACCGGAGTTTCACATTC+CGG | + | chr8.2:1497038-1497057 | None:intergenic | 50.0% | |
| ACGCTTCAGATTCACCGGTA+TGG | - | chr8.2:1496857-1496876 | MS.gene68870:CDS | 50.0% | |
| ACTGTTGGAGGAAACGGAAG+TGG | - | chr8.2:1497190-1497209 | MS.gene68870:CDS | 50.0% | |
| AGATCCGAACCCAGTTGAAC+CGG | - | chr8.2:1497016-1497035 | MS.gene68870:CDS | 50.0% | |
| AGGGAACTGTGGTTGAATCG+AGG | - | chr8.2:1497338-1497357 | MS.gene68870:CDS | 50.0% | |
| CATTCCGGTTCAACTGGGTT+CGG | + | chr8.2:1497023-1497042 | None:intergenic | 50.0% | |
| CGCTTCAGATTCACCGGTAT+GGG | - | chr8.2:1496858-1496877 | MS.gene68870:CDS | 50.0% | |
| GAATGTGAAACTCCGGTGGT+GGG | - | chr8.2:1497038-1497057 | MS.gene68870:CDS | 50.0% | |
| ! | TTCACCGGTATGGGTTGTTG+TGG | - | chr8.2:1496867-1496886 | MS.gene68870:CDS | 50.0% |
| !! | TTCTGGAATGAACCTTGCGG+CGG | - | chr8.2:1497070-1497089 | MS.gene68870:CDS | 50.0% |
| ACCGGAATGTGAAACTCCGG+TGG | - | chr8.2:1497034-1497053 | MS.gene68870:CDS | 55.0% | |
| CGAAGAAGGTGGAGCTACAG+TGG | - | chr8.2:1496959-1496978 | MS.gene68870:CDS | 55.0% | |
| GAGTGTGTTCGAGGGAACTG+TGG | - | chr8.2:1497327-1497346 | MS.gene68870:CDS | 55.0% | |
| GGAATGTGAAACTCCGGTGG+TGG | - | chr8.2:1497037-1497056 | MS.gene68870:CDS | 55.0% | |
| GGAGCGGCAAATGAGGGTAA+CGG | - | chr8.2:1497103-1497122 | MS.gene68870:CDS | 55.0% | |
| GGCACCACAACAACCCATAC+CGG | + | chr8.2:1496874-1496893 | None:intergenic | 55.0% | |
| TAATGCTGGTGCGGTGGTTG+TGG | - | chr8.2:1497223-1497242 | MS.gene68870:CDS | 55.0% | |
| TCAGTGTGCTGCGTGTGCAT+GGG | - | chr8.2:1497257-1497276 | MS.gene68870:CDS | 55.0% | |
| TGAGAGTAATGCTGGTGCGG+TGG | - | chr8.2:1497217-1497236 | MS.gene68870:CDS | 55.0% | |
| TTCAGTGTGCTGCGTGTGCA+TGG | - | chr8.2:1497256-1497275 | MS.gene68870:CDS | 55.0% | |
| !! | GCAAATGAGGGTAACGGAGG+AGG | - | chr8.2:1497109-1497128 | MS.gene68870:CDS | 55.0% |
| AATGAACCTTGCGGCGGCGT+TGG | - | chr8.2:1497076-1497095 | MS.gene68870:CDS | 60.0% | |
| CTGGTGCGGTGGTTGTGGAA+GGG | - | chr8.2:1497228-1497247 | MS.gene68870:CDS | 60.0% | |
| GAACCAGACGAACCCACCAC+CGG | + | chr8.2:1497053-1497072 | None:intergenic | 60.0% | |
| GGTGCAGCGTTCATACCGTG+TGG | - | chr8.2:1497290-1497309 | MS.gene68870:CDS | 60.0% | |
| ! | GCGGCAAATGAGGGTAACGG+AGG | - | chr8.2:1497106-1497125 | MS.gene68870:CDS | 60.0% |
| ! | GTAACGGAGGAGGCTAGTGG+CGG | - | chr8.2:1497119-1497138 | MS.gene68870:CDS | 60.0% |
| !! | AGGGTAACGGAGGAGGCTAG+TGG | - | chr8.2:1497116-1497135 | MS.gene68870:CDS | 60.0% |
| !! | GGGTTGTTGTGGTGCCACCT+GGG | - | chr8.2:1496878-1496897 | MS.gene68870:CDS | 60.0% |
| !! | GTGGTGGGTTCGTCTGGTTC+TGG | - | chr8.2:1497053-1497072 | MS.gene68870:CDS | 60.0% |
| !! | TGGGTTGTTGTGGTGCCACC+TGG | - | chr8.2:1496877-1496896 | MS.gene68870:CDS | 60.0% |
| GCTGGTGCGGTGGTTGTGGA+AGG | - | chr8.2:1497227-1497246 | MS.gene68870:CDS | 65.0% | |
| !! | ACTCCGGTGGTGGGTTCGTC+TGG | - | chr8.2:1497047-1497066 | MS.gene68870:CDS | 65.0% |
| ACGGAGGAGGCTAGTGGCGG+AGG | - | chr8.2:1497122-1497141 | MS.gene68870:CDS | 70.0% | |
| GGCGGCGGAGCGGCAAATGA+GGG | - | chr8.2:1497097-1497116 | MS.gene68870:CDS | 70.0% | |
| TGGCGGCGGAGCGGCAAATG+AGG | - | chr8.2:1497096-1497115 | MS.gene68870:CDS | 70.0% | |
| ! | GAACCTTGCGGCGGCGTTGG+CGG | - | chr8.2:1497079-1497098 | MS.gene68870:CDS | 70.0% |
| ! | GAGGAGGCTAGTGGCGGAGG+CGG | - | chr8.2:1497125-1497144 | MS.gene68870:CDS | 70.0% |
| GCGGAGAAGGAGCGACGCCG+TGG | - | chr8.2:1497150-1497169 | MS.gene68870:CDS | 75.0% | |
| ! | GAGGCTAGTGGCGGAGGCGG+AGG | - | chr8.2:1497128-1497147 | MS.gene68870:CDS | 75.0% |
| ! | GCTAGTGGCGGAGGCGGAGG+CGG | - | chr8.2:1497131-1497150 | MS.gene68870:CDS | 75.0% |
| ! | GGCGGAGGCGGAGGCGGAGA+AGG | - | chr8.2:1497137-1497156 | MS.gene68870:CDS | 80.0% |
| !!! | CCTTGCGGCGGCGTTGGCGG+CGG | - | chr8.2:1497082-1497101 | MS.gene68870:CDS | 80.0% |
| ! | CCGCCGCCAACGCCGCCGCA+AGG | + | chr8.2:1497085-1497104 | None:intergenic | 85.0% |
| !!! | CGGCGGCGTTGGCGGCGGAG+CGG | - | chr8.2:1497087-1497106 | MS.gene68870:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 1496726 | 1497412 | 1496726 | ID=MS.gene68870 |
| chr8.2 | mRNA | 1496726 | 1497412 | 1496726 | ID=MS.gene68870.t1;Parent=MS.gene68870 |
| chr8.2 | exon | 1496726 | 1497412 | 1496726 | ID=MS.gene68870.t1.exon1;Parent=MS.gene68870.t1 |
| chr8.2 | CDS | 1496726 | 1497412 | 1496726 | ID=cds.MS.gene68870.t1;Parent=MS.gene68870.t1 |
| Gene Sequence |
| Protein sequence |
