AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69264

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69264.t1 MTR_3g070030 80.398 352 35 3 1 318 1 352 0.0 569
MS.gene69264.t1 MTR_3g070040 76.023 342 40 6 12 318 1 335 0.0 504
MS.gene69264.t1 MTR_7g011130 65.160 376 49 6 1 318 1 352 4.70e-163 458
MS.gene69264.t1 MTR_7g011120 68.657 335 52 6 12 318 1 310 1.81e-155 437
MS.gene69264.t1 MTR_6g012670 49.533 321 132 7 14 318 15 321 1.80e-93 280
MS.gene69264.t1 MTR_4g108760 43.909 353 147 7 13 318 11 359 9.20e-85 259
MS.gene69264.t1 MTR_3g435150 55.963 218 92 2 5 222 2 215 1.67e-78 241
MS.gene69264.t1 MTR_2g078700 68.354 158 47 2 19 174 23 179 1.21e-73 232
MS.gene69264.t1 MTR_6g032770 58.639 191 76 2 14 202 13 202 3.29e-73 231
MS.gene69264.t1 MTR_7g085260 60.795 176 64 3 5 176 3 177 1.32e-70 224
MS.gene69264.t1 MTR_1g008740 56.701 194 76 4 19 209 13 201 1.38e-68 218
MS.gene69264.t1 MTR_1g008740 56.701 194 76 4 19 209 27 215 2.26e-68 218
MS.gene69264.t1 MTR_6g084430 63.291 158 53 2 19 176 5 157 2.57e-68 216
MS.gene69264.t1 MTR_3g109340 53.333 195 76 4 19 202 22 212 4.68e-66 211
MS.gene69264.t1 MTR_3g109340 52.821 195 76 4 19 202 22 211 7.45e-65 208
MS.gene69264.t1 MTR_3g116070 55.080 187 65 4 19 202 23 193 8.58e-61 197
MS.gene69264.t1 MTR_2g064470 55.414 157 64 3 16 171 8 159 1.23e-55 183
MS.gene69264.t1 MTR_5g041940 51.534 163 78 1 17 178 1 163 1.69e-55 181
MS.gene69264.t1 MTR_5g012080 47.393 211 93 6 20 218 8 212 4.00e-55 183
MS.gene69264.t1 MTR_8g024480 50.829 181 79 3 14 184 10 190 1.87e-54 183
MS.gene69264.t1 MTR_4g081870 51.412 177 78 4 18 188 8 182 2.00e-54 179
MS.gene69264.t1 MTR_4g035590 58.125 160 56 3 20 175 9 161 2.33e-54 181
MS.gene69264.t1 MTR_4g101680 54.777 157 57 3 20 170 8 156 2.45e-54 181
MS.gene69264.t1 MTR_8g059170 50.932 161 78 1 16 176 11 170 3.51e-54 180
MS.gene69264.t1 MTR_3g093050 45.374 227 101 6 19 230 22 240 1.83e-53 184
MS.gene69264.t1 MTR_3g093050 45.374 227 101 6 19 230 22 240 2.18e-53 184
MS.gene69264.t1 MTR_4g036030 45.192 208 97 5 20 222 8 203 4.34e-53 177
MS.gene69264.t1 MTR_3g093040 44.976 209 105 4 17 223 106 306 6.03e-53 176
MS.gene69264.t1 MTR_1g069805 45.213 188 92 3 19 204 10 188 9.79e-53 174
MS.gene69264.t1 MTR_3g088110 50.323 155 76 1 16 170 4 157 3.81e-52 173
MS.gene69264.t1 MTR_8g094580 49.425 174 80 3 17 186 5 174 3.86e-52 173
MS.gene69264.t1 MTR_7g085220 38.636 264 138 4 12 251 1 264 8.75e-52 174
MS.gene69264.t1 MTR_2g062730 40.809 272 123 11 16 263 7 264 9.58e-52 174
MS.gene69264.t1 MTR_5g069030 49.180 183 86 3 18 198 24 201 1.32e-51 180
MS.gene69264.t1 MTR_2g079990 50.311 161 77 1 16 176 13 170 1.41e-51 174
MS.gene69264.t1 MTR_7g100990 51.534 163 76 2 11 170 3 165 5.21e-51 172
MS.gene69264.t1 MTR_1g096430 51.592 157 62 3 20 170 8 156 5.93e-51 172
MS.gene69264.t1 MTR_5g021710 44.221 199 100 4 12 204 1 194 2.09e-50 171
MS.gene69264.t1 MTR_8g076110 51.948 154 66 3 20 170 7 155 3.58e-50 169
MS.gene69264.t1 MTR_2g064090 52.500 160 64 3 17 170 4 157 3.68e-50 170
MS.gene69264.t1 MTR_6g477900 52.229 157 70 2 17 171 4 157 5.96e-50 166
MS.gene69264.t1 MTR_2g080010 46.784 171 81 2 15 175 11 181 6.50e-50 169
MS.gene69264.t1 MTR_3g096920 49.677 155 77 1 16 170 4 157 9.76e-50 167
MS.gene69264.t1 MTR_7g097090 49.342 152 68 2 19 168 10 154 1.66e-49 167
MS.gene69264.t1 MTR_4g089135 46.023 176 73 3 19 172 15 190 9.07e-49 166
MS.gene69264.t1 MTR_2157s0010 37.879 264 140 6 12 261 1 254 1.27e-48 164
MS.gene69264.t1 MTR_7g005280 52.096 167 68 6 13 176 9 166 1.44e-48 163
MS.gene69264.t1 MTR_5g076850 48.000 175 86 2 17 189 4 175 2.59e-48 171
MS.gene69264.t1 MTR_3g064580 51.923 156 71 2 17 170 4 157 4.63e-48 171
MS.gene69264.t1 MTR_2g093810 39.004 241 122 6 19 244 14 244 8.74e-48 163
MS.gene69264.t1 MTR_2g079990 43.548 186 80 2 16 176 13 198 1.35e-47 164
MS.gene69264.t1 MTR_8g063550 45.562 169 86 3 18 184 5 169 1.77e-46 160
MS.gene69264.t1 MTR_8g467490 46.988 166 79 3 15 172 11 175 4.16e-46 160
MS.gene69264.t1 MTR_8g063550 45.562 169 86 3 18 184 5 169 6.28e-46 161
MS.gene69264.t1 MTR_8g063550 45.562 169 86 3 18 184 5 169 8.94e-46 160
MS.gene69264.t1 MTR_6g011860 47.205 161 74 3 21 172 17 175 1.13e-45 159
MS.gene69264.t1 MTR_1g090723 45.503 189 94 5 22 206 11 194 1.42e-45 163
MS.gene69264.t1 MTR_3g096920 54.615 130 58 1 16 145 4 132 1.69e-45 157
MS.gene69264.t1 MTR_1g090723 45.503 189 95 5 22 206 11 195 2.05e-45 163
MS.gene69264.t1 MTR_1g090723 45.503 189 94 5 22 206 11 194 2.22e-45 163
MS.gene69264.t1 MTR_5g040420 47.273 165 79 4 15 172 11 174 5.65e-45 157
MS.gene69264.t1 MTR_3g096140 44.571 175 90 4 12 184 1 170 5.93e-45 154
MS.gene69264.t1 MTR_3g096140 44.571 175 90 4 12 184 1 170 4.30e-44 154
MS.gene69264.t1 MTR_0036s0150 36.226 265 148 8 22 278 8 259 7.29e-44 157
MS.gene69264.t1 MTR_4g098630 33.333 303 185 6 15 303 2 301 1.15e-43 152
MS.gene69264.t1 MTR_8g093580 44.379 169 88 3 18 184 5 169 1.69e-43 155
MS.gene69264.t1 MTR_5g014300 47.531 162 70 3 19 171 6 161 4.31e-43 151
MS.gene69264.t1 MTR_1g097300 48.795 166 75 4 22 183 22 181 2.21e-42 154
MS.gene69264.t1 MTR_2g068920 42.188 192 94 6 1 176 1 191 5.19e-42 147
MS.gene69264.t1 MTR_2g068880 42.932 191 85 6 1 171 1 187 8.13e-42 147
MS.gene69264.t1 MTR_5g090970 42.442 172 88 3 8 170 9 178 5.10e-41 145
MS.gene69264.t1 MTR_4g134460 47.020 151 74 2 21 170 56 201 5.25e-41 148
MS.gene69264.t1 MTR_2g086880 53.600 125 56 2 19 142 19 142 2.19e-40 148
MS.gene69264.t1 MTR_2g086880 53.600 125 56 2 19 142 19 142 2.77e-40 149
MS.gene69264.t1 MTR_5g090970 42.442 172 87 4 8 170 9 177 2.92e-39 140
MS.gene69264.t1 MTR_1g090720 45.882 170 86 3 21 185 44 212 4.46e-39 144
MS.gene69264.t1 MTR_8g099750 41.875 160 87 3 12 167 7 164 3.12e-37 133
MS.gene69264.t1 MTR_3g096140 44.371 151 78 3 36 184 3 149 3.56e-37 135
MS.gene69264.t1 MTR_8g023840 54.198 131 54 5 20 145 12 141 3.62e-37 137
MS.gene69264.t1 MTR_4g075980 39.779 181 94 4 1 178 1 169 1.53e-36 133
MS.gene69264.t1 MTR_3g098810 42.169 166 87 4 12 170 7 170 1.49e-35 129
MS.gene69264.t1 MTR_8g023860 51.163 129 57 5 20 143 13 140 6.54e-35 131
MS.gene69264.t1 MTR_8g094580 52.033 123 51 3 67 185 1 119 1.31e-33 123
MS.gene69264.t1 MTR_3g098810 44.928 138 70 2 12 145 7 142 3.76e-33 120
MS.gene69264.t1 MTR_4g052620 42.038 157 83 4 19 168 5 160 6.57e-33 122
MS.gene69264.t1 MTR_2g086690 40.385 156 86 4 20 168 5 160 8.37e-31 116
MS.gene69264.t1 MTR_7g105170 39.645 169 93 6 19 178 4 172 3.60e-30 115
MS.gene69264.t1 MTR_8g023930 39.216 204 98 9 19 215 24 208 4.76e-30 119
MS.gene69264.t1 MTR_8g023900 42.949 156 73 7 21 170 195 340 9.85e-30 118
MS.gene69264.t1 MTR_8g023900 41.875 160 75 7 19 170 12 161 1.05e-27 112
MS.gene69264.t1 MTR_8g023880 46.528 144 55 7 19 143 7 147 2.48e-27 108
MS.gene69264.t1 MTR_4g094302 34.524 168 97 3 19 181 11 170 5.94e-25 99.8
MS.gene69264.t1 MTR_7g070140 50.000 88 39 2 72 154 17 104 1.36e-23 94.4
MS.gene69264.t1 MTR_4g094302 37.500 128 70 2 19 144 11 130 1.18e-22 92.8
MS.gene69264.t1 MTR_3g096400 35.465 172 84 7 15 171 3 162 4.83e-21 89.7
MS.gene69264.t1 MTR_8g093790 37.267 161 75 6 17 177 8 142 1.23e-19 85.1
MS.gene69264.t1 MTR_7g083360 35.075 134 81 5 12 142 3 133 3.83e-17 77.8
MS.gene69264.t1 MTR_7g083330 32.609 138 87 5 8 142 7 141 5.12e-17 78.2
MS.gene69264.t1 MTR_2g014680 32.609 184 98 6 2 168 36 210 3.71e-16 78.2
MS.gene69264.t1 MTR_7g083370 32.143 140 89 4 14 150 5 141 1.53e-15 72.8
MS.gene69264.t1 MTR_4g078875 29.651 172 96 5 14 168 43 206 9.83e-15 73.6
MS.gene69264.t1 MTR_2g090735 34.028 144 74 5 19 144 49 189 1.52e-13 70.1
MS.gene69264.t1 MTR_8g102240 31.818 176 83 8 19 168 47 211 1.19e-12 68.6
MS.gene69264.t1 MTR_8g102240 31.818 176 83 8 19 168 47 211 1.19e-12 68.6
MS.gene69264.t1 MTR_7g070150 46.032 63 22 2 111 170 4 57 5.49e-12 61.6
MS.gene69264.t1 MTR_1g093680 30.899 178 98 8 7 168 46 214 4.91e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69264.t1 AT5G61430 46.429 336 141 8 13 318 10 336 2.42e-90 273
MS.gene69264.t1 AT5G07680 46.201 329 150 7 10 318 8 329 2.96e-86 262
MS.gene69264.t1 AT5G07680 47.352 321 140 8 19 318 3 315 6.80e-85 258
MS.gene69264.t1 AT3G29035 48.175 274 120 4 3 260 8 275 5.28e-75 233
MS.gene69264.t1 AT5G39610 66.667 165 54 1 13 177 14 177 4.25e-74 230
MS.gene69264.t1 AT5G18270 66.038 159 52 2 15 172 17 174 6.34e-72 226
MS.gene69264.t1 AT5G18270 66.038 159 52 2 15 172 17 174 9.98e-72 225
MS.gene69264.t1 AT5G53950 68.831 154 45 2 19 170 17 169 4.62e-71 225
MS.gene69264.t1 AT3G04060 49.597 248 115 6 7 246 8 253 7.28e-71 223
MS.gene69264.t1 AT3G18400 56.354 181 75 1 19 199 5 181 5.35e-69 218
MS.gene69264.t1 AT2G24430 61.176 170 60 2 9 176 6 171 1.67e-68 216
MS.gene69264.t1 AT2G24430 61.176 170 60 2 9 176 6 171 1.67e-68 216
MS.gene69264.t1 AT3G15170 63.580 162 55 3 11 170 13 172 8.47e-67 212
MS.gene69264.t1 AT1G76420 62.338 154 52 2 19 170 22 171 1.85e-65 209
MS.gene69264.t1 AT5G61430 43.972 282 119 8 67 318 1 273 5.02e-65 206
MS.gene69264.t1 AT3G12977 50.625 160 77 1 19 178 18 175 1.04e-57 187
MS.gene69264.t1 AT1G56010 43.439 221 110 5 1 213 1 214 3.15e-57 187
MS.gene69264.t1 AT2G46770 43.721 215 101 4 14 214 11 219 4.23e-56 186
MS.gene69264.t1 AT4G10350 57.233 159 62 2 20 175 10 165 7.68e-55 182
MS.gene69264.t1 AT4G35580 48.649 185 89 3 19 200 9 190 9.79e-54 183
MS.gene69264.t1 AT4G35580 48.649 185 89 3 19 200 9 190 1.40e-53 184
MS.gene69264.t1 AT4G35580 48.649 185 89 3 19 200 9 190 1.50e-53 183
MS.gene69264.t1 AT1G12260 55.195 154 61 3 20 170 8 156 1.90e-53 178
MS.gene69264.t1 AT1G12260 55.195 154 61 3 20 170 8 156 3.43e-53 179
MS.gene69264.t1 AT1G33280 55.346 159 62 3 20 175 9 161 6.84e-53 176
MS.gene69264.t1 AT3G61910 47.150 193 86 5 14 193 6 195 8.72e-53 176
MS.gene69264.t1 AT1G62700 53.459 159 60 3 18 170 6 156 1.20e-52 178
MS.gene69264.t1 AT1G62700 53.459 159 60 3 18 170 6 156 1.20e-52 178
MS.gene69264.t1 AT1G77450 50.649 154 75 1 17 170 8 160 1.33e-52 174
MS.gene69264.t1 AT4G27410 51.899 158 67 3 16 170 11 162 2.77e-52 174
MS.gene69264.t1 AT1G33060 53.459 159 67 3 19 173 24 179 3.29e-52 182
MS.gene69264.t1 AT1G33060 54.088 159 66 3 19 173 24 179 3.29e-52 182
MS.gene69264.t1 AT5G66300 51.613 155 68 2 19 170 12 162 1.89e-51 172
MS.gene69264.t1 AT3G04070 52.047 171 71 4 13 173 4 173 2.25e-51 173
MS.gene69264.t1 AT5G08790 46.354 192 96 4 16 201 4 194 3.67e-51 171
MS.gene69264.t1 AT3G15500 50.311 161 77 2 16 176 11 168 5.90e-51 171
MS.gene69264.t1 AT1G32770 48.876 178 81 2 14 181 11 188 9.14e-51 172
MS.gene69264.t1 AT1G52890 50.932 161 76 2 16 176 11 168 1.22e-50 170
MS.gene69264.t1 AT5G62380 52.903 155 65 3 19 170 7 156 1.27e-50 171
MS.gene69264.t1 AT5G62380 52.903 155 65 3 19 170 7 156 1.27e-50 171
MS.gene69264.t1 AT1G71930 49.677 155 70 3 19 170 9 158 1.31e-50 171
MS.gene69264.t1 AT1G71930 49.677 155 70 3 19 170 9 158 1.31e-50 171
MS.gene69264.t1 AT1G01720 43.750 192 104 3 14 202 2 192 1.39e-50 169
MS.gene69264.t1 AT2G18060 49.390 164 75 3 15 175 5 163 3.13e-50 171
MS.gene69264.t1 AT2G18060 49.390 164 75 3 15 175 5 163 3.13e-50 171
MS.gene69264.t1 AT4G36160 50.625 160 71 3 14 170 5 159 4.16e-50 171
MS.gene69264.t1 AT4G36160 50.625 160 71 3 14 170 5 159 4.16e-50 171
MS.gene69264.t1 AT1G61110 47.191 178 84 3 5 172 2 179 4.18e-50 169
MS.gene69264.t1 AT4G36160 50.625 160 71 3 14 170 9 163 4.61e-50 171
MS.gene69264.t1 AT1G65910 48.824 170 80 3 17 183 4 169 6.33e-50 176
MS.gene69264.t1 AT3G17730 48.214 168 82 2 17 182 4 168 6.36e-50 166
MS.gene69264.t1 AT5G63790 51.515 165 70 4 11 170 43 202 7.15e-50 168
MS.gene69264.t1 AT1G69490 50.311 161 79 1 19 178 9 169 7.71e-50 167
MS.gene69264.t1 AT5G63790 51.515 165 70 4 11 170 53 212 7.81e-50 168
MS.gene69264.t1 AT3G03200 54.777 157 65 3 17 170 4 157 8.11e-50 172
MS.gene69264.t1 AT5G17260 54.140 157 66 3 17 170 4 157 3.02e-49 171
MS.gene69264.t1 AT3G04070 45.699 186 76 3 13 173 4 189 3.82e-49 167
MS.gene69264.t1 AT3G49530 47.368 171 80 4 4 171 2 165 4.08e-48 166
MS.gene69264.t1 AT4G27410 46.857 175 67 4 16 170 11 179 6.77e-48 163
MS.gene69264.t1 AT1G79580 52.174 161 67 4 16 172 14 168 6.78e-48 165
MS.gene69264.t1 AT1G79580 52.174 161 67 4 16 172 14 168 6.78e-48 165
MS.gene69264.t1 AT1G79580 52.174 161 67 4 16 172 14 168 6.78e-48 165
MS.gene69264.t1 AT1G79580 52.174 161 67 4 16 172 14 168 6.78e-48 165
MS.gene69264.t1 AT1G79580 52.174 161 67 4 16 172 14 168 6.78e-48 165
MS.gene69264.t1 AT4G28530 45.614 171 68 4 18 170 9 172 9.53e-48 164
MS.gene69264.t1 AT2G33480 52.597 154 67 3 17 170 13 160 1.06e-47 161
MS.gene69264.t1 AT3G49530 47.368 171 80 4 4 171 2 165 1.29e-47 166
MS.gene69264.t1 AT1G54330 52.229 157 67 2 17 171 4 154 1.36e-47 162
MS.gene69264.t1 AT5G04410 50.000 166 73 4 22 183 12 171 1.69e-47 168
MS.gene69264.t1 AT3G15510 45.562 169 82 2 23 181 21 189 2.21e-47 163
MS.gene69264.t1 AT2G33480 52.597 154 65 3 17 170 13 158 2.41e-47 160
MS.gene69264.t1 AT3G10500 48.171 164 79 3 22 183 12 171 2.97e-47 167
MS.gene69264.t1 AT5G13180 47.904 167 78 3 12 176 7 166 3.15e-47 159
MS.gene69264.t1 AT5G24590 35.034 294 161 9 19 291 13 297 4.56e-47 164
MS.gene69264.t1 AT1G26870 46.667 180 85 4 1 172 1 177 5.90e-47 163
MS.gene69264.t1 AT3G10480 50.595 168 73 4 22 185 30 191 1.03e-46 163
MS.gene69264.t1 AT3G10480 50.296 169 73 4 22 185 30 192 4.26e-46 162
MS.gene69264.t1 AT2G27300 56.923 130 52 4 19 146 15 142 7.11e-46 159
MS.gene69264.t1 AT3G10490 48.521 169 76 4 22 185 30 192 1.06e-45 155
MS.gene69264.t1 AT5G46590 48.718 156 75 3 19 171 6 159 1.09e-45 157
MS.gene69264.t1 AT5G46590 51.471 136 63 2 19 151 6 141 1.01e-44 154
MS.gene69264.t1 AT2G43000 38.710 217 109 5 1 217 1 193 1.25e-44 154
MS.gene69264.t1 AT5G09330 43.529 170 90 3 16 183 3 168 1.30e-44 159
MS.gene69264.t1 AT5G09330 43.529 170 90 3 16 183 3 168 1.30e-44 159
MS.gene69264.t1 AT5G09330 43.529 170 90 3 16 183 3 168 1.30e-44 159
MS.gene69264.t1 AT5G09330 43.529 170 90 3 16 183 3 168 1.30e-44 159
MS.gene69264.t1 AT5G09330 43.529 170 90 3 16 183 3 168 1.30e-44 159
MS.gene69264.t1 AT3G10490 48.521 169 76 4 22 185 30 192 2.76e-44 157
MS.gene69264.t1 AT5G39820 44.134 179 79 4 15 173 17 194 3.16e-44 154
MS.gene69264.t1 AT5G64060 42.941 170 91 3 16 183 3 168 1.48e-43 153
MS.gene69264.t1 AT4G17980 46.835 158 77 4 19 171 6 161 6.18e-42 146
MS.gene69264.t1 AT4G17980 46.835 158 77 4 19 171 6 161 8.98e-42 147
MS.gene69264.t1 AT1G52880 46.541 159 76 2 23 172 21 179 9.16e-42 147
MS.gene69264.t1 AT2G02450 46.667 150 74 2 22 170 54 198 2.49e-41 147
MS.gene69264.t1 AT2G02450 46.667 150 74 2 22 170 54 198 3.31e-41 148
MS.gene69264.t1 AT3G10480 43.564 202 70 5 22 185 30 225 2.25e-40 148
MS.gene69264.t1 AT1G32510 45.062 162 78 3 19 171 6 165 3.94e-40 142
MS.gene69264.t1 AT5G22290 47.761 134 68 2 19 151 22 154 4.47e-40 143
MS.gene69264.t1 AT3G44290 49.242 132 65 2 19 149 15 145 5.48e-40 140
MS.gene69264.t1 AT1G34190 44.970 169 86 4 18 183 14 178 1.17e-39 146
MS.gene69264.t1 AT1G34180 45.029 171 83 5 18 183 14 178 2.06e-39 144
MS.gene69264.t1 AT3G44290 49.242 132 65 2 19 149 15 145 6.83e-39 140
MS.gene69264.t1 AT1G34180 45.029 171 83 5 18 183 14 178 7.56e-39 144
MS.gene69264.t1 AT3G12977 54.867 113 49 1 66 178 12 122 3.18e-38 135
MS.gene69264.t1 AT2G17040 41.212 165 85 3 17 178 5 160 6.76e-38 136
MS.gene69264.t1 AT3G12910 42.697 178 86 6 13 176 16 191 2.97e-37 135
MS.gene69264.t1 AT1G34180 41.530 183 84 5 18 183 14 190 3.71e-37 138
MS.gene69264.t1 AT1G34180 41.530 183 84 5 18 183 14 190 8.56e-37 139
MS.gene69264.t1 AT1G56010 46.753 154 68 4 67 213 1 147 1.15e-36 132
MS.gene69264.t1 AT4G10350 57.391 115 43 2 64 175 7 118 1.65e-35 130
MS.gene69264.t1 AT1G32870 45.238 168 78 5 22 183 13 172 6.73e-35 133
MS.gene69264.t1 AT1G32870 45.238 168 78 5 22 183 13 172 8.22e-35 132
MS.gene69264.t1 AT1G32870 45.238 168 78 5 22 183 49 208 9.27e-35 133
MS.gene69264.t1 AT5G04395 44.138 145 65 2 19 147 28 172 1.25e-32 119
MS.gene69264.t1 AT2G33480 56.566 99 40 2 72 170 8 103 6.50e-31 116
MS.gene69264.t1 AT4G28530 43.182 132 57 3 18 131 9 140 4.27e-29 114
MS.gene69264.t1 AT4G01550 45.926 135 67 4 17 145 2 136 2.64e-28 114
MS.gene69264.t1 AT5G22380 35.593 177 102 5 22 189 8 181 4.38e-28 109
MS.gene69264.t1 AT4G01520 41.912 136 72 5 17 145 2 137 4.55e-27 108
MS.gene69264.t1 AT1G02230 46.154 130 60 6 20 142 4 130 6.82e-27 108
MS.gene69264.t1 AT3G04420 41.732 127 70 2 20 142 4 130 1.33e-26 106
MS.gene69264.t1 AT3G44350 35.000 180 109 5 21 194 7 184 2.33e-26 104
MS.gene69264.t1 AT3G04420 41.732 127 70 2 20 142 4 130 2.78e-26 107
MS.gene69264.t1 AT4G01540 43.939 132 65 6 22 145 7 137 3.81e-26 107
MS.gene69264.t1 AT4G01540 43.939 132 65 6 22 145 7 137 7.61e-26 106
MS.gene69264.t1 AT4G01540 43.939 132 65 6 22 145 7 137 7.77e-26 106
MS.gene69264.t1 AT4G01540 43.939 132 65 6 22 145 7 137 1.01e-25 107
MS.gene69264.t1 AT3G44350 40.310 129 71 3 21 143 7 135 3.27e-25 99.4
MS.gene69264.t1 AT3G10490 53.608 97 36 3 92 185 2 92 1.50e-24 102
MS.gene69264.t1 AT3G10490 53.608 97 36 3 92 185 2 92 1.50e-24 102
MS.gene69264.t1 AT1G02220 39.370 127 70 3 20 142 4 127 6.19e-23 98.2
MS.gene69264.t1 AT1G02250 33.854 192 101 7 20 204 4 176 7.13e-23 97.8
MS.gene69264.t1 AT2G18060 53.165 79 32 2 97 175 2 75 1.02e-20 90.5
MS.gene69264.t1 AT2G43000 37.681 138 63 4 80 217 1 115 2.82e-20 87.4
MS.gene69264.t1 AT5G64530 31.792 173 92 5 19 178 3 162 1.98e-19 84.7
MS.gene69264.t1 AT1G01010 36.301 146 73 6 21 152 5 144 3.06e-19 88.2
MS.gene69264.t1 AT5G14000 32.948 173 105 4 14 183 10 174 4.85e-19 84.3
MS.gene69264.t1 AT5G64530 36.154 130 67 5 19 145 3 119 1.27e-18 81.6
MS.gene69264.t1 AT5G14000 35.556 135 83 2 14 146 10 142 1.73e-18 81.3
MS.gene69264.t1 AT3G56530 34.848 132 81 3 15 142 48 178 1.11e-17 82.4
MS.gene69264.t1 AT5G50820 29.775 178 110 5 12 182 10 179 3.84e-17 78.6
MS.gene69264.t1 AT3G04430 37.121 132 69 4 25 143 6 136 2.61e-16 76.6
MS.gene69264.t1 AT5G22290 55.556 54 24 0 98 151 2 55 4.09e-16 77.0
MS.gene69264.t1 AT3G55210 32.143 140 81 3 19 144 11 150 4.43e-14 71.6
MS.gene69264.t1 AT5G56620 32.240 183 81 8 17 168 41 211 1.06e-12 68.6
MS.gene69264.t1 AT5G56620 32.240 183 81 8 17 168 41 211 1.08e-12 68.6
MS.gene69264.t1 AT4G29230 32.402 179 83 9 17 168 46 213 1.14e-12 68.9
MS.gene69264.t1 AT4G29230 32.402 179 83 9 17 168 45 212 1.19e-12 68.6
MS.gene69264.t1 AT5G56620 32.240 183 81 8 17 168 41 211 1.68e-12 67.8
MS.gene69264.t1 AT4G29230 32.402 179 83 9 17 168 46 213 3.36e-12 67.4

Find 72 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAGGGAAATGCATTAAT+TGG 0.121823 3.2:-63804007 MS.gene69264:CDS
TTATTCAGAGCTGGCTAAAA+TGG 0.240651 3.2:-63804146 MS.gene69264:intron
AAATGAAAAGGTCAAATTTC+CGG 0.296027 3.2:-63805145 MS.gene69264:CDS
GGATAATTGTGGAAAGAAAA+TGG 0.302070 3.2:-63803220 MS.gene69264:CDS
GATATCTCATCTGTGGTATA+TGG 0.312060 3.2:-63802883 MS.gene69264:CDS
AAAACTCTTGGTTTAGGCTT+TGG 0.320721 3.2:+63802929 None:intergenic
CAAAAGAAAACTCTTGGTTT+AGG 0.327229 3.2:+63802923 None:intergenic
AGAGATTTATTAGTATTTGA+TGG 0.327312 3.2:+63803156 None:intergenic
TAGTAGCTCTATTGGTCCTT+TGG 0.349158 3.2:+63804071 None:intergenic
TGATTTCTCTTCAAAACAAA+TGG 0.368321 3.2:-63803094 MS.gene69264:CDS
TATTGGTCCTTTGGCCAGTT+GGG 0.376646 3.2:+63804080 None:intergenic
GGCATGTTTCAAAGGTGGTC+TGG 0.377514 3.2:-63802856 MS.gene69264:CDS
CAAGAATTGTCATCAGCTTC+AGG 0.379981 3.2:-63802829 MS.gene69264:CDS
CTAAAATGGGAGAAACAAAA+TGG 0.380978 3.2:-63804132 MS.gene69264:CDS
GAGCTACTAATGCTGGCTAT+TGG 0.387868 3.2:-63804057 MS.gene69264:CDS
GCCAGCATTAGTAGCTCTAT+TGG 0.388516 3.2:+63804063 None:intergenic
TTGGTTTAGGCTTTGGTTTG+AGG 0.390632 3.2:+63802936 None:intergenic
TCAAGGGAAATGCATTAATT+GGG 0.420828 3.2:-63804006 MS.gene69264:CDS
GCAGTTATTACTTCAGCTAA+AGG 0.433317 3.2:+63803063 None:intergenic
CTCTCCCAAAAGAAAACTCT+TGG 0.435959 3.2:+63802917 None:intergenic
TCATCTGTGGTATATGGAAA+TGG 0.441427 3.2:-63802877 MS.gene69264:CDS
AATTCCCGACCATTGAGGTT+TGG 0.446812 3.2:+63803031 None:intergenic
CTATTGGTCCTTTGGCCAGT+TGG 0.450132 3.2:+63804079 None:intergenic
AGAAATCAGAAAGAGTGGTT+TGG 0.453996 3.2:+63803109 None:intergenic
GCATGTTTCAAAGGTGGTCT+GGG 0.461659 3.2:-63802855 MS.gene69264:CDS
GTATTCATGCATGACCCAAT+TGG 0.462426 3.2:+63803931 None:intergenic
TATTCAGAGCTGGCTAAAAT+GGG 0.463612 3.2:-63804145 MS.gene69264:intron
AAATCAATACCTTGTCAAGA+AGG 0.466786 3.2:-63805085 MS.gene69264:CDS
GCTGGCTATTGGAAAGCAAC+AGG 0.467708 3.2:-63804046 MS.gene69264:CDS
TGAAGAGAAATCAGAAAGAG+TGG 0.474541 3.2:+63803104 None:intergenic
ACCAATAGAGCTACTAATGC+TGG 0.495849 3.2:-63804064 MS.gene69264:CDS
TTGATTTATAAGCTCTTCAT+CGG 0.497039 3.2:+63805101 None:intergenic
TTAGCTGAAGTAATAACTGC+TGG 0.510536 3.2:-63803060 MS.gene69264:CDS
TGAACCAAACCTCAATGGTC+GGG 0.515698 3.2:-63803035 MS.gene69264:CDS
AGGGAGAGAAAATACCCAAC+TGG 0.520226 3.2:-63804094 MS.gene69264:CDS
TTACCATTCCATGTGTGGAT+AGG 0.526862 3.2:+63803876 None:intergenic
GTTTAGGCTTTGGTTTGAGG+TGG 0.531634 3.2:+63802939 None:intergenic
TGGCTTGAACCAAACCTCAA+TGG 0.535838 3.2:-63803040 MS.gene69264:CDS
CAGTTGGAGAATGAGAATCT+TGG 0.538735 3.2:-63802964 MS.gene69264:CDS
ATGGAAATGGCATGTTTCAA+AGG 0.539060 3.2:-63802864 MS.gene69264:CDS
TTTATAAGCTCTTCATCGGT+CGG 0.540210 3.2:+63805105 None:intergenic
GAAAAGGTCAAATTTCCGGC+TGG 0.542041 3.2:-63805141 MS.gene69264:CDS
ATGCATGAATACCGATTGGC+GGG 0.543086 3.2:-63803920 MS.gene69264:CDS
CAACCTATCCACACATGGAA+TGG 0.547037 3.2:-63803879 MS.gene69264:intron
GTCTTTAAGAAGGATAATTG+TGG 0.552416 3.2:-63803231 MS.gene69264:CDS
ATCACTGTTGAGGATGCAGT+TGG 0.553870 3.2:-63802980 MS.gene69264:CDS
TTGAACCAAACCTCAATGGT+CGG 0.560970 3.2:-63803036 MS.gene69264:CDS
AATTGTGGAAAGAAAATGGA+TGG 0.567327 3.2:-63803216 MS.gene69264:CDS
CAATATTACCATTCCATGTG+TGG 0.569497 3.2:+63803871 None:intergenic
AAAATGGATGGTTCAAAACA+TGG 0.570089 3.2:-63803204 MS.gene69264:CDS
AGAGTGTGTTACCCGCCAAT+CGG 0.570583 3.2:+63803909 None:intergenic
CTCAAGAACAATCACTGTTG+AGG 0.576259 3.2:-63802990 MS.gene69264:CDS
TCTCAGTAGAGTCTTTAAGA+AGG 0.576793 3.2:-63803241 MS.gene69264:CDS
TGGATGGTTCAAAACATGGA+AGG 0.583286 3.2:-63803200 MS.gene69264:CDS
TGACGAATTCCCGACCATTG+AGG 0.585386 3.2:+63803026 None:intergenic
ATTTGATGGTCCTTCTCTAG+AGG 0.592265 3.2:+63803170 None:intergenic
AATTCACCTGGCAAATCCCA+TGG 0.596462 3.2:+63805003 None:intergenic
CATGCATGAATACCGATTGG+CGG 0.600090 3.2:-63803921 MS.gene69264:CDS
AGGTTTAACTCCTCTAGAGA+AGG 0.606008 3.2:-63803180 MS.gene69264:CDS
TGTCATCAACCTTCTTGACA+AGG 0.607463 3.2:+63805076 None:intergenic
GTCATCAGCTTCAGGACATG+TGG 0.608647 3.2:-63802821 MS.gene69264:CDS
GGTCATGCATGAATACCGAT+TGG 0.609797 3.2:-63803924 MS.gene69264:CDS
TGTGAACCATGGGATTTGCC+AGG 0.615720 3.2:-63805009 MS.gene69264:intron
GGAGAGAATCGATAACCAGC+CGG 0.632530 3.2:+63805126 None:intergenic
GAAAATACCCAACTGGCCAA+AGG 0.637584 3.2:-63804087 MS.gene69264:CDS
TATGAATAAGTGTGAACCAT+GGG 0.641317 3.2:-63805019 MS.gene69264:CDS
ATGTGGTCAATGATAGCTTG+TGG 0.641641 3.2:-63802804 MS.gene69264:CDS
GAAATGGCATGTTTCAAAGG+TGG 0.654634 3.2:-63802861 MS.gene69264:CDS
GAGCACAACCTATCCACACA+TGG 0.663138 3.2:-63803884 MS.gene69264:CDS
ATATGAATAAGTGTGAACCA+TGG 0.681966 3.2:-63805020 MS.gene69264:CDS
TGATGCTGATATCTCATCTG+TGG 0.688150 3.2:-63802890 MS.gene69264:CDS
TACAAAGGAAGAGCGCCGAG+TGG 0.721558 3.2:-63803962 MS.gene69264:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTACTTTATTTAGAAAA+AGG + chr3.2:63804427-63804446 None:intergenic 10.0%
!! AAAAAAAAAAAAAAACTCCA+AGG + chr3.2:63803071-63803090 None:intergenic 15.0%
!! AAATAGAAAGAAAAACAATT+TGG - chr3.2:63803460-63803479 MS.gene69264:intron 15.0%
!! ATTATATTATATTAGTAGTC+TGG - chr3.2:63803030-63803049 MS.gene69264:CDS 15.0%
!! TAAAGACATTAAAAACTAAA+GGG - chr3.2:63803133-63803152 MS.gene69264:CDS 15.0%
!! TTAAAGACATTAAAAACTAA+AGG - chr3.2:63803132-63803151 MS.gene69264:CDS 15.0%
!!! AATTGTTTTTCTTTCTATTT+TGG + chr3.2:63803460-63803479 None:intergenic 15.0%
!!! AGTGATTTTGATTTTTTTTA+GGG - chr3.2:63804362-63804381 MS.gene69264:intron 15.0%
!!! TAAAGTTTTTGTCAAAATTA+CGG + chr3.2:63804246-63804265 None:intergenic 15.0%
!!! TAGTGATTTTGATTTTTTTT+AGG - chr3.2:63804361-63804380 MS.gene69264:intron 15.0%
!!! TTTTTTTTTATAGAGTGAAT+GGG - chr3.2:63804713-63804732 MS.gene69264:intron 15.0%
!!! TTTTTTTTTTATAGAGTGAA+TGG - chr3.2:63804712-63804731 MS.gene69264:intron 15.0%
!! AAAAAAACAATAAATTCACC+TGG + chr3.2:63802990-63803009 None:intergenic 20.0%
!! AAAGACATTAAAAACTAAAG+GGG - chr3.2:63803134-63803153 MS.gene69264:CDS 20.0%
!! AGAGATTTATTAGTATTTGA+TGG + chr3.2:63804825-63804844 None:intergenic 20.0%
!! GAATGTTTACAATCAAAAAA+TGG - chr3.2:63802809-63802828 MS.gene69264:CDS 20.0%
!! TCAAAAAATGGAAAATGAAA+AGG - chr3.2:63802821-63802840 MS.gene69264:CDS 20.0%
!!! ACTTATGCTTTCTTATTTTT+TGG - chr3.2:63803808-63803827 MS.gene69264:intron 20.0%
!!! TTTTAAAGTTATTATGAGTG+CGG - chr3.2:63803733-63803752 MS.gene69264:intron 20.0%
! AAATGAAAAGGTCAAATTTC+CGG - chr3.2:63802833-63802852 MS.gene69264:CDS 25.0%
! AATTGGGATGAAAAAAACAT+TGG - chr3.2:63803988-63804007 MS.gene69264:CDS 25.0%
! GAAAGAAAAACAATTTGGAA+TGG - chr3.2:63803465-63803484 MS.gene69264:intron 25.0%
! TAAGTTTGACAATAATGACA+CGG + chr3.2:63804291-63804310 None:intergenic 25.0%
! TCTAATGTATGTATGTCTTT+CGG - chr3.2:63803772-63803791 MS.gene69264:intron 25.0%
! TGATTTCTCTTCAAAACAAA+TGG - chr3.2:63804884-63804903 MS.gene69264:intron 25.0%
! TTGATTTATAAGCTCTTCAT+CGG + chr3.2:63802880-63802899 None:intergenic 25.0%
!! AAAGACAAAGAGATTTTCAA+GGG - chr3.2:63803956-63803975 MS.gene69264:CDS 25.0%
!! TAAACCAAGAGTTTTCTTTT+GGG - chr3.2:63805057-63805076 MS.gene69264:CDS 25.0%
!!! AAAACATTGGTTTTCTACAA+AGG - chr3.2:63804001-63804020 MS.gene69264:CDS 25.0%
AAAATGGATGGTTCAAAACA+TGG - chr3.2:63804774-63804793 MS.gene69264:intron 30.0%
AAATCAATACCTTGTCAAGA+AGG - chr3.2:63802893-63802912 MS.gene69264:CDS 30.0%
AATTGTGGAAAGAAAATGGA+TGG - chr3.2:63804762-63804781 MS.gene69264:intron 30.0%
AGATAACGACAATATCTCTA+AGG + chr3.2:63803606-63803625 None:intergenic 30.0%
AGGTAATTCTATCAAACACA+TGG + chr3.2:63804216-63804235 None:intergenic 30.0%
ATATGAATAAGTGTGAACCA+TGG - chr3.2:63802958-63802977 MS.gene69264:CDS 30.0%
ATGCAGTGTTTATTTGATTC+AGG + chr3.2:63803310-63803329 None:intergenic 30.0%
CAAAAGAAAACTCTTGGTTT+AGG + chr3.2:63805058-63805077 None:intergenic 30.0%
CAAAGAAGACTTAGTTTATG+TGG - chr3.2:63803419-63803438 MS.gene69264:intron 30.0%
CACATAAACTAAGTCTTCTT+TGG + chr3.2:63803421-63803440 None:intergenic 30.0%
CTAAAATGGGAGAAACAAAA+TGG - chr3.2:63803846-63803865 MS.gene69264:intron 30.0%
CTAAGGTGTAATTAAACCAT+TGG + chr3.2:63803589-63803608 None:intergenic 30.0%
GGATAATTGTGGAAAGAAAA+TGG - chr3.2:63804758-63804777 MS.gene69264:intron 30.0%
TAAACTAAGTCTTCTTTGGT+AGG + chr3.2:63803417-63803436 None:intergenic 30.0%
TATGAATAAGTGTGAACCAT+GGG - chr3.2:63802959-63802978 MS.gene69264:CDS 30.0%
TCAAGGGAAATGCATTAATT+GGG - chr3.2:63803972-63803991 MS.gene69264:CDS 30.0%
TTCAAGGGAAATGCATTAAT+TGG - chr3.2:63803971-63803990 MS.gene69264:CDS 30.0%
TTGTCGTTATCTTACTTTGA+TGG - chr3.2:63803614-63803633 MS.gene69264:intron 30.0%
! CAAAGACAAAGAGATTTTCA+AGG - chr3.2:63803955-63803974 MS.gene69264:CDS 30.0%
! CTAAACCAAGAGTTTTCTTT+TGG - chr3.2:63805056-63805075 MS.gene69264:CDS 30.0%
! GTCTTTAAGAAGGATAATTG+TGG - chr3.2:63804747-63804766 MS.gene69264:intron 30.0%
!! ACAACTTTTAGAGAAACTAC+TGG - chr3.2:63804514-63804533 MS.gene69264:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG - chr3.2:63803864-63803883 MS.gene69264:intron 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG - chr3.2:63803865-63803884 MS.gene69264:intron 30.0%
!!! GTTTGGTTTTCACTATTGTA+TGG + chr3.2:63804855-63804874 None:intergenic 30.0%
!!! TTTTTTGGTTTATTCAGAGC+TGG - chr3.2:63803823-63803842 MS.gene69264:intron 30.0%
AAAACTCTTGGTTTAGGCTT+TGG + chr3.2:63805052-63805071 None:intergenic 35.0%
AGAAATCAGAAAGAGTGGTT+TGG + chr3.2:63804872-63804891 None:intergenic 35.0%
ATGGAAATGGCATGTTTCAA+AGG - chr3.2:63805114-63805133 MS.gene69264:CDS 35.0%
CAAACAATGTCGTACTAAGA+CGG - chr3.2:63803377-63803396 MS.gene69264:intron 35.0%
CAACACGACACTAATAAATG+TGG - chr3.2:63803690-63803709 MS.gene69264:intron 35.0%
CAATATTACCATTCCATGTG+TGG + chr3.2:63804110-63804129 None:intergenic 35.0%
CACATTTATTAGTGTCGTGT+TGG + chr3.2:63803692-63803711 None:intergenic 35.0%
CCAGATCTAATCAATGACTT+TGG + chr3.2:63803263-63803282 None:intergenic 35.0%
GAGTGGTGAAAAAACCAATT+GGG - chr3.2:63804033-63804052 MS.gene69264:CDS 35.0%
GATATCTCATCTGTGGTATA+TGG - chr3.2:63805095-63805114 MS.gene69264:CDS 35.0%
GCAGTTATTACTTCAGCTAA+AGG + chr3.2:63804918-63804937 None:intergenic 35.0%
GTCAAAATTACGGTAACACA+AGG + chr3.2:63804236-63804255 None:intergenic 35.0%
TATTCAGAGCTGGCTAAAAT+GGG - chr3.2:63803833-63803852 MS.gene69264:intron 35.0%
TCATCTGTGGTATATGGAAA+TGG - chr3.2:63805101-63805120 MS.gene69264:CDS 35.0%
TGAAGAGAAATCAGAAAGAG+TGG + chr3.2:63804877-63804896 None:intergenic 35.0%
TGGTGGAAAAAGAAGAAAAG+TGG - chr3.2:63803534-63803553 MS.gene69264:intron 35.0%
TTAGCTGAAGTAATAACTGC+TGG - chr3.2:63804918-63804937 MS.gene69264:intron 35.0%
TTATTCAGAGCTGGCTAAAA+TGG - chr3.2:63803832-63803851 MS.gene69264:intron 35.0%
TTTATAAGCTCTTCATCGGT+CGG + chr3.2:63802876-63802895 None:intergenic 35.0%
! CCAAAGTCATTGATTAGATC+TGG - chr3.2:63803260-63803279 MS.gene69264:intron 35.0%
! TCTCAGTAGAGTCTTTAAGA+AGG - chr3.2:63804737-63804756 MS.gene69264:intron 35.0%
! TGGTTTTCACTATTGTATGG+AGG + chr3.2:63804852-63804871 None:intergenic 35.0%
!! ACAATTTGGAATGGTGCTTT+TGG - chr3.2:63803474-63803493 MS.gene69264:intron 35.0%
!! CAATTTGGAATGGTGCTTTT+GGG - chr3.2:63803475-63803494 MS.gene69264:intron 35.0%
!!! CAATTGGTTTTTTCACCACT+CGG + chr3.2:63804034-63804053 None:intergenic 35.0%
ACAGATCCTCGATGAATGTT+TGG + chr3.2:63804322-63804341 None:intergenic 40.0%
ACCAATAGAGCTACTAATGC+TGG - chr3.2:63803914-63803933 MS.gene69264:CDS 40.0%
ATGTGGTCAATGATAGCTTG+TGG - chr3.2:63805174-63805193 MS.gene69264:CDS 40.0%
CAAGAATTGTCATCAGCTTC+AGG - chr3.2:63805149-63805168 MS.gene69264:CDS 40.0%
CAGTTGGAGAATGAGAATCT+TGG - chr3.2:63805014-63805033 MS.gene69264:CDS 40.0%
CATCGATGTTACAGATCTCT+AGG + chr3.2:63803237-63803256 None:intergenic 40.0%
CGAGTGGTGAAAAAACCAAT+TGG - chr3.2:63804032-63804051 MS.gene69264:CDS 40.0%
CTCAAGAACAATCACTGTTG+AGG - chr3.2:63804988-63805007 MS.gene69264:intron 40.0%
CTCTCCCAAAAGAAAACTCT+TGG + chr3.2:63805064-63805083 None:intergenic 40.0%
GAAATGGCATGTTTCAAAGG+TGG - chr3.2:63805117-63805136 MS.gene69264:CDS 40.0%
GTATTCATGCATGACCCAAT+TGG + chr3.2:63804050-63804069 None:intergenic 40.0%
TAACCCTAAAACACCCTCAT+TGG - chr3.2:63803505-63803524 MS.gene69264:intron 40.0%
TGATGCTGATATCTCATCTG+TGG - chr3.2:63805088-63805107 MS.gene69264:CDS 40.0%
TGGATGGTTCAAAACATGGA+AGG - chr3.2:63804778-63804797 MS.gene69264:intron 40.0%
TGTCATCAACCTTCTTGACA+AGG + chr3.2:63802905-63802924 None:intergenic 40.0%
TGTTACAGATCTCTAGGCAT+CGG + chr3.2:63803231-63803250 None:intergenic 40.0%
TTACCATTCCATGTGTGGAT+AGG + chr3.2:63804105-63804124 None:intergenic 40.0%
TTGAACCAAACCTCAATGGT+CGG - chr3.2:63804942-63804961 MS.gene69264:intron 40.0%
! AAGAAAAGTGGTGACGACTA+GGG - chr3.2:63803546-63803565 MS.gene69264:intron 40.0%
! AGGTTTAACTCCTCTAGAGA+AGG - chr3.2:63804798-63804817 MS.gene69264:intron 40.0%
! ATTTGATGGTCCTTCTCTAG+AGG + chr3.2:63804811-63804830 None:intergenic 40.0%
! GTCATTGATTAGATCTGGAC+TGG - chr3.2:63803265-63803284 MS.gene69264:intron 40.0%
! TAGTAGCTCTATTGGTCCTT+TGG + chr3.2:63803910-63803929 None:intergenic 40.0%
! TTATTAGTGTCGTGTTGGTG+CGG + chr3.2:63803687-63803706 None:intergenic 40.0%
!! TTGGTTTAGGCTTTGGTTTG+AGG + chr3.2:63805045-63805064 None:intergenic 40.0%
!!! CTACCAATGAGGGTGTTTTA+GGG + chr3.2:63803511-63803530 None:intergenic 40.0%
!!! TCTACCAATGAGGGTGTTTT+AGG + chr3.2:63803512-63803531 None:intergenic 40.0%
AACACCCTCATTGGTAGATC+TGG - chr3.2:63803514-63803533 MS.gene69264:intron 45.0%
AATTCACCTGGCAAATCCCA+TGG + chr3.2:63802978-63802997 None:intergenic 45.0%
AATTCCCGACCATTGAGGTT+TGG + chr3.2:63804950-63804969 None:intergenic 45.0%
AGGGAGAGAAAATACCCAAC+TGG - chr3.2:63803884-63803903 MS.gene69264:CDS 45.0%
ATCACTGTTGAGGATGCAGT+TGG - chr3.2:63804998-63805017 MS.gene69264:intron 45.0%
CAACCTATCCACACATGGAA+TGG - chr3.2:63804099-63804118 MS.gene69264:CDS 45.0%
CTATGTACCACCGACACATA+AGG - chr3.2:63803658-63803677 MS.gene69264:intron 45.0%
GAAAAGGTCAAATTTCCGGC+TGG - chr3.2:63802837-63802856 MS.gene69264:CDS 45.0%
GAAAATACCCAACTGGCCAA+AGG - chr3.2:63803891-63803910 MS.gene69264:CDS 45.0%
GCATGTTTCAAAGGTGGTCT+GGG - chr3.2:63805123-63805142 MS.gene69264:CDS 45.0%
GGATTTGAAAAGCTACGCCT+TGG - chr3.2:63803051-63803070 MS.gene69264:CDS 45.0%
GGTCATGCATGAATACCGAT+TGG - chr3.2:63804054-63804073 MS.gene69264:CDS 45.0%
GTCGATCCAAACATTCATCG+AGG - chr3.2:63804313-63804332 MS.gene69264:intron 45.0%
TATTGGTCCTTTGGCCAGTT+GGG + chr3.2:63803901-63803920 None:intergenic 45.0%
TCCACCAGATCTACCAATGA+GGG + chr3.2:63803521-63803540 None:intergenic 45.0%
TGAACCAAACCTCAATGGTC+GGG - chr3.2:63804943-63804962 MS.gene69264:intron 45.0%
TGGCTTGAACCAAACCTCAA+TGG - chr3.2:63804938-63804957 MS.gene69264:intron 45.0%
TTCCACCAGATCTACCAATG+AGG + chr3.2:63803522-63803541 None:intergenic 45.0%
! ATGCATGAATACCGATTGGC+GGG - chr3.2:63804058-63804077 MS.gene69264:CDS 45.0%
! CATGCATGAATACCGATTGG+CGG - chr3.2:63804057-63804076 MS.gene69264:CDS 45.0%
! GAAGAAAAGTGGTGACGACT+AGG - chr3.2:63803545-63803564 MS.gene69264:intron 45.0%
! GAGCTACTAATGCTGGCTAT+TGG - chr3.2:63803921-63803940 MS.gene69264:CDS 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG + chr3.2:63803918-63803937 None:intergenic 45.0%
!! GTTTAGGCTTTGGTTTGAGG+TGG + chr3.2:63805042-63805061 None:intergenic 45.0%
!! CTATAAAAAAAAAAAAAAAA+AGG + chr3.2:63804706-63804725 None:intergenic 5.0%
ACCCTCATTGGTAGATCTGG+TGG - chr3.2:63803517-63803536 MS.gene69264:intron 50.0%
AGAGTGTGTTACCCGCCAAT+CGG + chr3.2:63804072-63804091 None:intergenic 50.0%
CTAGGGTTTGGCAAGGAGAA+AGG - chr3.2:63803563-63803582 MS.gene69264:intron 50.0%
CTATTGGTCCTTTGGCCAGT+TGG + chr3.2:63803902-63803921 None:intergenic 50.0%
GAGCACAACCTATCCACACA+TGG - chr3.2:63804094-63804113 MS.gene69264:CDS 50.0%
GCTGGCTATTGGAAAGCAAC+AGG - chr3.2:63803932-63803951 MS.gene69264:CDS 50.0%
GGAGAGAATCGATAACCAGC+CGG + chr3.2:63802855-63802874 None:intergenic 50.0%
GGCATGTTTCAAAGGTGGTC+TGG - chr3.2:63805122-63805141 MS.gene69264:CDS 50.0%
GGTGCGGTTACCTTATGTGT+CGG + chr3.2:63803671-63803690 None:intergenic 50.0%
GTCATCAGCTTCAGGACATG+TGG - chr3.2:63805157-63805176 MS.gene69264:CDS 50.0%
TGACGAATTCCCGACCATTG+AGG + chr3.2:63804955-63804974 None:intergenic 50.0%
TGTGAACCATGGGATTTGCC+AGG - chr3.2:63802969-63802988 MS.gene69264:CDS 50.0%
TTGGCAAGGAGAAAGGCCAA+TGG - chr3.2:63803570-63803589 MS.gene69264:intron 50.0%
! AAGTGGTGACGACTAGGGTT+TGG - chr3.2:63803551-63803570 MS.gene69264:intron 50.0%
GCGGTTACCTTATGTGTCGG+TGG + chr3.2:63803668-63803687 None:intergenic 55.0%
GTGACGACTAGGGTTTGGCA+AGG - chr3.2:63803556-63803575 MS.gene69264:intron 55.0%
!! TACAAAGGAAGAGCGCCGAG+TGG - chr3.2:63804016-63804035 MS.gene69264:CDS 55.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 63802795 63805205 63802795 ID=MS.gene69264
chr3.2 mRNA 63802795 63805205 63802795 ID=MS.gene69264.t1;Parent=MS.gene69264
chr3.2 exon 63805010 63805205 63805010 ID=MS.gene69264.t1.exon1;Parent=MS.gene69264.t1
chr3.2 CDS 63805010 63805205 63805010 ID=cds.MS.gene69264.t1;Parent=MS.gene69264.t1
chr3.2 exon 63803880 63804160 63803880 ID=MS.gene69264.t1.exon2;Parent=MS.gene69264.t1
chr3.2 CDS 63803880 63804160 63803880 ID=cds.MS.gene69264.t1;Parent=MS.gene69264.t1
chr3.2 exon 63802795 63803274 63802795 ID=MS.gene69264.t1.exon3;Parent=MS.gene69264.t1
chr3.2 CDS 63802795 63803274 63802795 ID=cds.MS.gene69264.t1;Parent=MS.gene69264.t1
Gene Sequence

>MS.gene69264

ATGGGATCAAATGAGAATGTTTACAATCAAAAAATGGAAAATGAAAAGGTCAAATTTCCGGCTGGTTATCGATTCTCTCCGACCGATGAAGAGCTTATAAATCAATACCTTGTCAAGAAGGTTGATGACAATAATTTCTGTGCTATAGATATTGCTGAAGTTGATATGAATAAGTGTGAACCATGGGATTTGCCAGGTGAATTTATTGTTTTTTTGTAAGTAAATATTAGTTGTTATTATATTATATTAGTAGTCTGGATTTGAAAAGCTACGCCTTGGAGTTTTTTTTTTTTTTTTAAAATAAACGATGTTGATAGAACATTTATAACGCATACATTTAAAGACATTAAAAACTAAAGGGGTGATGCATTTGCGAAAAGAACAGCAAAATACAAAAGTCTACAAATATGACTACATTCAAGTGTAAAAAAAACCGATGCCTAGAGATCTGTAACATCGATGACGCCAAAGTCATTGATTAGATCTGGACTGGATCAAAGCTAATCTTTCAACCTGAATCAAATAAACACTGCATTAAGATGAAAAATCAAGAAAACACTATTCAAGAACGAGAAATCATAACAAACAATGTCGTACTAAGACGGTGAAATCATAAAAACCTACCAAAGAAGACTTAGTTTATGTGGAAATCACTTATATAACCAAAATAGAAAGAAAAACAATTTGGAATGGTGCTTTTGGGACAAAATTAACCCTAAAACACCCTCATTGGTAGATCTGGTGGAAAAAGAAGAAAAGTGGTGACGACTAGGGTTTGGCAAGGAGAAAGGCCAATGGTTTAATTACACCTTAGAGATATTGTCGTTATCTTACTTTGATGGTTATATATTTTCTCTTAATTACTATGTACCACCGACACATAAGGTAACCGCACCAACACGACACTAATAAATGTGGTTAGATTTAATTATTTTATTTTTTAAAGTTATTATGAGTGCGGATCTGTCAGTGTTATGTCTAATGTATGTATGTCTTTCGGTGTTTCATAACTTACTTATGCTTTCTTATTTTTTGGTTTATTCAGAGCTGGCTAAAATGGGAGAAACAAAATGGTATTTTTTCTGTGTGAGGGAGAGAAAATACCCAACTGGCCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAGAGATTTTCAAGGGAAATGCATTAATTGGGATGAAAAAAACATTGGTTTTCTACAAAGGAAGAGCGCCGAGTGGTGAAAAAACCAATTGGGTCATGCATGAATACCGATTGGCGGGTAACACACTCTCTGAGCACAACCTATCCACACATGGAATGGTAATATTGCTATATTTTTTTATTGCTTTGTTTTTGTCTATGATTTCTACTCTTACTACATGTGAAAATTCATTAGTGTATGTTCACATTGACCATGTGTTTGATAGAATTACCTTGTGTTACCGTAATTTTGACAAAAACTTTACTTTTGAATTTTGACAAAACTACCGTGTCATTATTGTCAAACTTATCGTCGATCCAAACATTCATCGAGGATCTGTTTGTAATAAATAATACAAATAGTGATTTTGATTTTTTTTAGGGAAATAGTGATTTTGATATATATAATTAAGAGATTAATTTCCTTTTTCTAAATAAAGTAAATTATTTCATGTTTGATTGCAATCATAAAAATAAAATAAAAAAACTTTTATAAAAAATCAATTAAAAAATACAACTTTTAGAGAAACTACTGGAAACAACTTTTTGTTTGAAGCAGATTTAATATTCTTTCAAATAGAATTAAAAAAAACTGTAATAAATGAATAAAAACTAAAAAAAAAGATTGTTTTGTTTAAAATAACGTTTTTTTCATCTAATATTTTTTTTAACAAATTTTTTCATCTAATATTAATGTGTGAACCTTTTTTTTTTTTTTTTTATAGAGTGAATGGGTTCTCAGTAGAGTCTTTAAGAAGGATAATTGTGGAAAGAAAATGGATGGTTCAAAACATGGAAGGTTTAACTCCTCTAGAGAAGGACCATCAAATACTAATAAATCTCTATTGCCTCCATACAATAGTGAAAACCAAACCACTCTTTCTGATTTCTCTTCAAAACAAATGGATGTTTATCCTTTAGCTGAAGTAATAACTGCTGGCTTGAACCAAACCTCAATGGTCGGGAATTCGTCAAACTTTTTCTTCTCTCAAGAACAATCACTGTTGAGGATGCAGTTGGAGAATGAGAATCTTGGAACCACCTCAAACCAAAGCCTAAACCAAGAGTTTTCTTTTGGGAGAGACACTGATGCTGATATCTCATCTGTGGTATATGGAAATGGCATGTTTCAAAGGTGGTCTGGGAATCAAGAATTGTCATCAGCTTCAGGACATGTGGTCAATGATAGCTTGTGGAATTTCTGA
Protein sequence

>MS.gene69264.t1

MGSNENVYNQKMENEKVKFPAGYRFSPTDEELINQYLVKKVDDNNFCAIDIAEVDMNKCEPWDLPELAKMGETKWYFFCVRERKYPTGQRTNRATNAGYWKATGKDKEIFKGNALIGMKKTLVFYKGRAPSGEKTNWVMHEYRLAGNTLSEHNLSTHGMSEWVLSRVFKKDNCGKKMDGSKHGRFNSSREGPSNTNKSLLPPYNSENQTTLSDFSSKQMDVYPLAEVITAGLNQTSMVGNSSNFFFSQEQSLLRMQLENENLGTTSNQSLNQEFSFGRDTDADISSVVYGNGMFQRWSGNQELSSASGHVVNDSLWNF