AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69291

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69291.t1 MTR_3g069520 90.217 368 36 0 81 448 1 368 0.0 688
MS.gene69291.t1 MTR_3g069780 87.399 373 41 3 81 449 1 371 0.0 655
MS.gene69291.t1 MTR_3g438030 87.131 373 42 3 81 449 1 371 0.0 654
MS.gene69291.t1 MTR_3g448360 78.226 372 77 4 81 449 1 371 0.0 588
MS.gene69291.t1 MTR_3g463960 64.249 386 120 4 81 448 2 387 0.0 512
MS.gene69291.t1 MTR_3g463950 64.249 386 120 4 81 448 2 387 0.0 512
MS.gene69291.t1 MTR_3g463970 64.249 386 120 4 81 448 2 387 0.0 512
MS.gene69291.t1 MTR_3g463940 64.249 386 120 4 81 448 2 387 0.0 512
MS.gene69291.t1 MTR_2g079090 66.129 372 108 6 81 448 1 358 2.46e-174 493
MS.gene69291.t1 MTR_3g463930 62.944 394 119 7 81 448 2 394 9.77e-174 493
MS.gene69291.t1 MTR_0029s0050 66.398 372 107 6 81 448 1 358 2.97e-173 490
MS.gene69291.t1 MTR_2g079080 65.591 372 110 6 81 448 1 358 3.96e-172 487
MS.gene69291.t1 MTR_0029s0100 66.129 372 108 6 81 448 1 358 1.81e-171 485
MS.gene69291.t1 MTR_2g043980 58.933 375 132 7 79 449 5 361 3.78e-150 431
MS.gene69291.t1 MTR_2g015650 49.091 385 174 6 76 449 1 374 6.52e-124 365
MS.gene69291.t1 MTR_2g015670 49.438 356 156 7 100 448 21 359 2.16e-110 330
MS.gene69291.t1 MTR_2g043990 52.703 296 111 6 79 370 67 337 2.84e-97 295
MS.gene69291.t1 MTR_2g015630 44.509 346 176 5 115 449 36 376 5.56e-95 291
MS.gene69291.t1 MTR_2g015580 42.857 371 191 7 79 439 21 380 2.07e-93 288
MS.gene69291.t1 MTR_2g015590 43.695 341 179 7 108 439 29 365 9.75e-91 280
MS.gene69291.t1 MTR_3g466240 53.846 221 70 3 181 397 2 194 6.81e-72 225
MS.gene69291.t1 MTR_4g104240 35.200 375 220 12 77 439 4 367 5.41e-68 221
MS.gene69291.t1 MTR_2g015590 43.382 272 145 5 108 371 29 299 1.05e-65 214
MS.gene69291.t1 MTR_3g466190 64.671 167 39 3 135 301 7 153 1.18e-64 208
MS.gene69291.t1 MTR_3g466190 82.051 78 14 0 372 449 152 229 1.73e-37 137
MS.gene69291.t1 MTR_7g087190 30.280 393 235 12 78 448 14 389 3.22e-50 175
MS.gene69291.t1 MTR_7g116870 33.708 356 206 11 108 447 31 372 3.73e-49 172
MS.gene69291.t1 MTR_8g028160 32.976 373 222 13 86 439 11 374 1.28e-48 171
MS.gene69291.t1 MTR_1g030220 32.208 385 225 11 78 442 11 379 4.70e-48 169
MS.gene69291.t1 MTR_1g030340 31.500 400 226 13 75 448 8 385 1.04e-46 166
MS.gene69291.t1 MTR_1g030268 33.983 359 194 11 108 442 38 377 3.86e-46 164
MS.gene69291.t1 MTR_6g007090 30.848 389 229 9 68 439 5 370 3.45e-44 159
MS.gene69291.t1 MTR_7g111780 31.965 341 205 13 110 441 36 358 1.79e-43 156
MS.gene69291.t1 MTR_1g030230 32.782 363 209 11 100 441 22 370 1.84e-43 157
MS.gene69291.t1 MTR_8g089805 30.423 355 215 9 108 441 38 381 9.17e-43 155
MS.gene69291.t1 MTR_1g030275 33.711 353 201 10 108 441 37 375 2.93e-42 154
MS.gene69291.t1 MTR_7g113860 33.151 365 190 17 106 439 25 366 3.78e-42 153
MS.gene69291.t1 MTR_7g113860 30.469 384 219 16 83 439 10 372 1.36e-41 152
MS.gene69291.t1 MTR_7g033150 32.979 376 202 15 100 444 25 381 1.73e-41 152
MS.gene69291.t1 MTR_7g033165 30.508 354 212 8 108 440 31 371 5.97e-40 147
MS.gene69291.t1 MTR_7g033155 29.829 409 226 13 76 444 8 395 9.70e-40 147
MS.gene69291.t1 MTR_6g007095 30.179 391 233 10 77 445 3 375 1.64e-39 151
MS.gene69291.t1 MTR_6g007095 27.941 340 196 11 121 441 381 690 2.03e-27 115
MS.gene69291.t1 MTR_1g082390 30.899 356 207 14 100 432 21 360 1.27e-36 138
MS.gene69291.t1 MTR_8g038680 31.282 390 214 18 78 439 1 364 1.44e-36 138
MS.gene69291.t1 MTR_1g030268 33.091 275 164 6 108 371 38 303 6.42e-34 130
MS.gene69291.t1 MTR_8g022810 30.523 344 184 17 109 428 40 352 6.00e-31 123
MS.gene69291.t1 MTR_8g031420 28.655 342 208 13 105 434 30 347 3.08e-30 120
MS.gene69291.t1 MTR_6g007100 31.143 350 205 15 108 445 31 356 3.18e-30 120
MS.gene69291.t1 MTR_1g030265 31.126 302 179 11 158 441 53 343 1.50e-29 118
MS.gene69291.t1 MTR_8g031430 28.307 378 228 15 81 441 11 362 2.39e-29 118
MS.gene69291.t1 MTR_8g031390 28.382 377 221 16 72 434 7 348 7.17e-29 117
MS.gene69291.t1 MTR_7g111780 31.086 267 161 10 182 441 9 259 1.58e-28 113
MS.gene69291.t1 MTR_1g025680 29.815 379 213 17 78 433 1 349 6.79e-28 115
MS.gene69291.t1 MTR_7g033165 30.651 261 165 4 108 357 31 286 1.43e-27 112
MS.gene69291.t1 MTR_8g031400 27.371 369 223 14 81 434 11 349 2.93e-27 112
MS.gene69291.t1 MTR_8g014910 29.204 339 201 13 110 432 32 347 4.79e-27 111
MS.gene69291.t1 MTR_1g025780 28.324 346 194 16 110 433 41 354 6.99e-27 111
MS.gene69291.t1 MTR_2g033930 29.674 337 204 12 110 434 32 347 4.52e-26 108
MS.gene69291.t1 MTR_4g056280 28.212 358 217 13 92 432 10 344 4.77e-26 108
MS.gene69291.t1 MTR_7g113860 29.032 310 175 14 156 439 8 298 1.88e-25 106
MS.gene69291.t1 MTR_2g100620 27.647 340 205 13 110 432 31 346 3.48e-25 106
MS.gene69291.t1 MTR_1g025700 29.155 343 196 16 110 433 50 364 4.46e-25 106
MS.gene69291.t1 MTR_1g025720 29.412 340 193 14 108 428 35 346 6.35e-25 105
MS.gene69291.t1 MTR_5g022630 28.022 364 221 13 81 427 15 354 6.41e-25 105
MS.gene69291.t1 MTR_4g056160 28.060 335 212 10 110 432 27 344 6.87e-25 105
MS.gene69291.t1 MTR_8g089805 27.000 300 187 9 163 441 25 313 7.67e-25 104
MS.gene69291.t1 MTR_2g015080 28.610 367 214 18 83 427 16 356 8.58e-25 105
MS.gene69291.t1 MTR_8g012540 29.213 356 212 15 78 412 1 337 1.13e-24 104
MS.gene69291.t1 MTR_1g025910 29.947 374 208 16 81 433 9 349 2.51e-24 104
MS.gene69291.t1 MTR_3g098270 29.683 347 201 16 108 435 32 354 4.13e-24 103
MS.gene69291.t1 MTR_1g025760 28.117 409 244 18 48 433 14 395 6.41e-24 103
MS.gene69291.t1 MTR_2g044100 27.809 356 209 16 103 437 36 364 8.40e-24 103
MS.gene69291.t1 MTR_8g031390 28.783 337 195 15 72 398 7 308 8.43e-24 101
MS.gene69291.t1 MTR_5g009100 28.190 337 212 11 112 437 48 365 3.39e-23 101
MS.gene69291.t1 MTR_3g464730 29.759 373 212 19 81 433 2 344 3.72e-23 100
MS.gene69291.t1 MTR_3g052490 29.395 347 207 13 110 440 32 356 4.26e-23 100
MS.gene69291.t1 MTR_4g087985 28.409 352 206 16 109 434 35 366 1.07e-22 99.4
MS.gene69291.t1 MTR_5g022640 26.431 367 237 15 78 433 15 359 3.00e-22 98.2
MS.gene69291.t1 MTR_5g084750 28.116 345 206 13 110 437 30 349 4.14e-22 97.4
MS.gene69291.t1 MTR_4g122200 28.065 367 215 14 100 447 27 363 1.59e-21 95.9
MS.gene69291.t1 MTR_5g084790 27.297 381 234 13 67 437 4 351 4.62e-21 94.4
MS.gene69291.t1 MTR_8g079050 27.708 397 233 19 67 440 1 366 9.36e-21 94.0
MS.gene69291.t1 MTR_2g033920 28.161 348 199 13 109 434 34 352 1.08e-20 93.6
MS.gene69291.t1 MTR_3g082830 26.331 338 221 10 110 437 38 357 1.21e-20 93.2
MS.gene69291.t1 MTR_3g005650 27.794 349 203 16 110 439 30 348 1.38e-20 93.2
MS.gene69291.t1 MTR_1g060490 27.515 338 199 15 107 431 34 338 1.80e-20 92.8
MS.gene69291.t1 MTR_5g078210 27.219 338 206 15 114 436 29 341 2.04e-20 92.4
MS.gene69291.t1 MTR_3g052580 29.261 352 200 16 110 440 27 350 3.83e-20 92.4
MS.gene69291.t1 MTR_3g052580 29.261 352 200 16 110 440 28 351 5.44e-20 91.7
MS.gene69291.t1 MTR_5g084770 28.775 351 203 15 101 432 21 343 7.41e-20 90.9
MS.gene69291.t1 MTR_1g069175 26.608 342 213 13 109 434 32 351 1.64e-19 90.1
MS.gene69291.t1 MTR_3g052480 28.613 346 208 14 110 438 33 356 1.83e-19 90.1
MS.gene69291.t1 MTR_3g114090 29.070 344 204 16 106 433 32 351 3.22e-19 89.0
MS.gene69291.t1 MTR_5g074270 26.786 336 212 16 108 429 31 346 3.24e-19 89.4
MS.gene69291.t1 MTR_4g035353 25.410 366 219 14 98 439 19 354 4.16e-19 89.0
MS.gene69291.t1 MTR_1g024890 27.350 351 221 14 103 439 25 355 1.32e-18 87.4
MS.gene69291.t1 MTR_3g023220 27.492 331 183 15 111 423 34 325 3.06e-18 86.3
MS.gene69291.t1 MTR_8g022790 24.855 346 212 10 105 434 32 345 4.63e-18 85.9
MS.gene69291.t1 MTR_5g078210 27.356 329 187 14 114 429 29 318 4.97e-18 85.1
MS.gene69291.t1 MTR_7g116520 26.571 350 213 16 109 439 33 357 4.98e-18 85.9
MS.gene69291.t1 MTR_3g005660 27.928 333 205 17 112 429 38 350 5.08e-18 85.9
MS.gene69291.t1 MTR_8g075200 27.154 383 221 17 81 433 2 356 8.81e-18 85.5
MS.gene69291.t1 MTR_5g083040 27.011 348 214 16 110 438 32 358 9.31e-18 84.7
MS.gene69291.t1 MTR_0009s0250 26.087 322 194 13 110 413 33 328 1.08e-17 84.3
MS.gene69291.t1 MTR_1g060500 27.954 347 194 17 107 431 37 349 1.41e-17 84.3
MS.gene69291.t1 MTR_2g084585 26.269 335 215 12 110 432 30 344 1.96e-17 84.0
MS.gene69291.t1 MTR_8g087890 26.409 337 201 15 112 429 33 341 1.24e-16 81.6
MS.gene69291.t1 MTR_4g108690 26.036 338 210 13 112 433 29 342 2.02e-16 80.9
MS.gene69291.t1 MTR_8g075220 25.364 343 219 13 108 433 38 360 4.22e-16 80.1
MS.gene69291.t1 MTR_8g022810 31.579 209 108 10 109 299 40 231 6.06e-16 79.0
MS.gene69291.t1 MTR_7g116570 25.073 343 223 13 109 438 33 354 7.35e-16 79.3
MS.gene69291.t1 MTR_3g435540 26.389 360 216 15 112 445 25 361 8.06e-16 79.0
MS.gene69291.t1 MTR_3g114120 26.531 343 195 17 110 428 47 356 9.18e-16 79.0
MS.gene69291.t1 MTR_7g116500 26.593 361 223 16 95 438 18 353 1.27e-15 78.6
MS.gene69291.t1 MTR_1g092750 23.692 325 213 9 111 427 41 338 3.53e-15 77.0
MS.gene69291.t1 MTR_6g021530 26.331 357 225 17 97 438 17 350 1.79e-14 75.1
MS.gene69291.t1 MTR_5g093090 26.062 353 211 12 110 440 28 352 2.82e-14 74.3
MS.gene69291.t1 MTR_7g104220 25.816 337 199 16 111 431 43 344 7.97e-14 72.8
MS.gene69291.t1 MTR_1g079530 26.667 345 201 15 109 434 28 339 2.94e-13 71.2
MS.gene69291.t1 MTR_3g021460 23.467 375 226 13 81 434 1 335 3.13e-13 71.2
MS.gene69291.t1 MTR_2g033920 27.046 281 168 10 109 371 34 295 6.07e-13 69.7
MS.gene69291.t1 MTR_8g074570 25.131 382 231 16 76 434 7 356 1.30e-12 69.3
MS.gene69291.t1 MTR_3g024510 24.478 335 210 14 112 429 40 348 2.82e-12 68.2
MS.gene69291.t1 MTR_8g087870 27.746 346 200 17 111 439 30 342 3.17e-12 68.2
MS.gene69291.t1 MTR_2g017965 25.641 351 207 19 111 439 34 352 3.60e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69291.t1 AT5G45910 44.385 374 190 9 81 440 1 370 1.42e-101 308
MS.gene69291.t1 AT1G28610 43.275 342 180 6 109 441 30 366 1.42e-91 283
MS.gene69291.t1 AT1G28580 41.228 342 186 7 108 439 35 371 6.53e-86 268
MS.gene69291.t1 AT2G27360 41.983 343 183 8 108 439 31 368 8.36e-86 268
MS.gene69291.t1 AT1G28570 42.398 342 182 7 108 439 32 368 1.82e-85 267
MS.gene69291.t1 AT1G28600 39.840 374 202 9 77 439 3 364 3.29e-85 266
MS.gene69291.t1 AT1G31550 40.379 369 201 10 83 439 8 369 6.52e-85 266
MS.gene69291.t1 AT1G28590 40.580 345 190 7 108 442 34 373 2.86e-84 265
MS.gene69291.t1 AT1G31550 40.108 369 199 11 83 439 8 366 1.00e-81 258
MS.gene69291.t1 AT1G28670 40.000 350 184 9 108 441 33 372 1.59e-79 251
MS.gene69291.t1 AT1G28660 40.571 350 181 10 108 441 33 371 2.99e-79 251
MS.gene69291.t1 AT1G28640 39.017 346 192 7 108 441 33 371 5.04e-78 248
MS.gene69291.t1 AT1G28660 40.857 350 179 11 108 441 33 370 5.26e-78 248
MS.gene69291.t1 AT1G28650 39.193 347 190 8 108 441 35 373 1.27e-76 244
MS.gene69291.t1 AT1G28580 39.175 291 168 5 153 439 5 290 1.34e-67 218
MS.gene69291.t1 AT3G48460 35.772 369 208 11 88 439 12 368 1.45e-61 205
MS.gene69291.t1 AT5G03980 33.431 341 179 9 95 431 14 310 5.62e-52 178
MS.gene69291.t1 AT1G28570 42.453 212 115 4 232 439 88 296 4.67e-50 172
MS.gene69291.t1 AT1G28570 42.308 208 113 4 236 439 1 205 3.96e-49 167
MS.gene69291.t1 AT4G01130 33.523 352 203 11 108 439 32 372 8.74e-49 171
MS.gene69291.t1 AT1G56670 30.077 389 229 14 75 446 5 367 4.96e-45 161
MS.gene69291.t1 AT1G54790 33.518 361 194 14 106 439 28 369 1.98e-43 157
MS.gene69291.t1 AT5G14450 32.123 358 208 12 108 445 39 381 3.46e-43 156
MS.gene69291.t1 AT1G67830 30.812 357 209 11 101 431 21 365 4.69e-42 153
MS.gene69291.t1 AT1G54790 32.609 368 200 15 100 439 21 368 4.44e-41 150
MS.gene69291.t1 AT3G05180 32.692 364 208 14 95 437 24 371 1.58e-40 149
MS.gene69291.t1 AT3G62280 31.034 348 210 12 101 439 31 357 5.62e-40 147
MS.gene69291.t1 AT1G09390 31.232 349 207 13 110 446 37 364 2.59e-39 145
MS.gene69291.t1 AT3G26430 29.630 351 223 6 108 441 29 372 4.88e-39 145
MS.gene69291.t1 AT1G54790 30.769 390 204 16 100 439 21 394 9.01e-38 142
MS.gene69291.t1 AT1G28600 38.605 215 114 6 77 282 3 208 1.14e-37 137
MS.gene69291.t1 AT1G28610 40.860 186 101 3 109 287 30 213 7.85e-37 135
MS.gene69291.t1 AT4G01130 32.130 277 165 7 108 371 32 298 2.20e-33 129
MS.gene69291.t1 AT3G27950 28.010 382 241 10 76 441 1 364 1.31e-30 122
MS.gene69291.t1 AT1G71120 29.204 339 199 11 110 434 31 342 1.35e-30 121
MS.gene69291.t1 AT1G56670 29.073 313 186 11 75 371 5 297 1.23e-29 117
MS.gene69291.t1 AT1G06990 28.836 378 236 15 69 436 2 356 1.63e-29 118
MS.gene69291.t1 AT1G73610 28.358 335 199 12 109 433 34 337 7.24e-29 116
MS.gene69291.t1 AT1G20120 29.859 355 192 16 108 436 76 399 4.38e-28 115
MS.gene69291.t1 AT4G10950 28.655 342 211 13 106 434 66 387 2.38e-27 113
MS.gene69291.t1 AT1G23500 26.593 361 224 14 85 434 9 339 2.86e-27 112
MS.gene69291.t1 AT2G40250 26.857 350 225 12 101 436 26 358 3.28e-27 112
MS.gene69291.t1 AT1G20132 28.198 344 199 14 110 433 61 376 4.03e-27 112
MS.gene69291.t1 AT3G14225 28.035 346 205 14 110 435 37 358 1.01e-26 111
MS.gene69291.t1 AT5G45950 28.869 336 199 13 110 432 40 348 1.52e-26 110
MS.gene69291.t1 AT3G14225 28.367 349 204 15 110 435 37 362 2.76e-26 110
MS.gene69291.t1 AT1G53920 28.652 356 212 15 110 448 48 378 4.95e-26 109
MS.gene69291.t1 AT1G53940 30.636 346 198 15 109 435 38 360 1.20e-25 108
MS.gene69291.t1 AT4G01130 27.667 300 180 11 163 439 1 286 2.49e-25 105
MS.gene69291.t1 AT3G16370 28.531 354 212 14 100 437 22 350 5.00e-25 105
MS.gene69291.t1 AT4G10950 28.363 342 208 14 106 434 66 383 7.33e-25 106
MS.gene69291.t1 AT5G40990 29.213 356 213 13 98 435 24 358 1.13e-24 105
MS.gene69291.t1 AT1G75880 28.144 334 212 12 110 433 52 367 1.29e-24 105
MS.gene69291.t1 AT2G31540 27.688 372 233 14 80 436 8 358 2.30e-24 104
MS.gene69291.t1 AT1G75880 29.167 336 207 14 110 433 52 368 7.69e-24 102
MS.gene69291.t1 AT5G63170 26.911 327 195 12 110 424 28 322 1.05e-23 102
MS.gene69291.t1 AT1G75920 26.975 367 218 13 81 433 6 336 2.24e-23 100
MS.gene69291.t1 AT2G42990 29.630 324 196 13 110 421 28 331 2.37e-23 101
MS.gene69291.t1 AT3G62280 28.777 278 174 9 101 371 31 291 3.88e-23 99.4
MS.gene69291.t1 AT1G20130 28.080 349 200 13 110 433 184 506 4.24e-23 102
MS.gene69291.t1 AT1G20130 28.080 349 200 13 110 433 204 526 6.40e-23 101
MS.gene69291.t1 AT4G26790 26.627 338 216 13 108 433 27 344 8.73e-23 99.4
MS.gene69291.t1 AT4G26790 26.627 338 216 13 108 433 27 344 8.73e-23 99.4
MS.gene69291.t1 AT5G42170 28.614 339 199 15 110 432 50 361 1.75e-22 99.0
MS.gene69291.t1 AT1G75890 27.139 339 210 14 110 433 47 363 1.82e-22 99.0
MS.gene69291.t1 AT1G75890 27.139 339 210 14 110 433 76 392 2.93e-22 98.6
MS.gene69291.t1 AT2G30310 27.978 361 222 16 85 428 7 346 5.63e-22 97.4
MS.gene69291.t1 AT1G75890 27.794 349 208 15 110 433 47 376 5.65e-22 97.4
MS.gene69291.t1 AT1G75900 27.108 332 215 12 110 432 43 356 1.07e-21 96.7
MS.gene69291.t1 AT1G71250 26.012 346 218 13 110 439 41 364 2.14e-21 95.9
MS.gene69291.t1 AT2G04570 27.397 365 226 16 86 436 7 346 2.43e-21 95.1
MS.gene69291.t1 AT5G45960 26.036 338 214 13 110 431 47 364 2.56e-21 95.5
MS.gene69291.t1 AT5G15720 27.679 336 203 13 110 428 30 342 3.19e-21 95.1
MS.gene69291.t1 AT5G22810 27.446 368 227 16 81 432 8 351 5.52e-21 94.4
MS.gene69291.t1 AT1G20135 25.203 369 209 14 79 427 5 326 6.13e-21 94.0
MS.gene69291.t1 AT3G04290 28.280 343 212 13 109 438 28 349 6.33e-21 94.4
MS.gene69291.t1 AT5G08460 27.078 373 224 15 77 428 18 363 6.52e-21 94.7
MS.gene69291.t1 AT1G75930 26.593 361 220 15 88 432 4 335 6.53e-21 94.0
MS.gene69291.t1 AT1G54000 25.876 371 227 14 76 431 1 338 1.12e-20 94.0
MS.gene69291.t1 AT4G28780 28.655 342 212 14 109 438 30 351 1.18e-20 93.6
MS.gene69291.t1 AT2G03980 28.221 326 204 12 108 423 41 346 1.18e-20 93.6
MS.gene69291.t1 AT2G03980 28.221 326 204 12 108 423 41 346 1.18e-20 93.6
MS.gene69291.t1 AT2G03980 28.221 326 204 12 108 423 41 346 1.18e-20 93.6
MS.gene69291.t1 AT2G03980 28.221 326 204 12 108 423 41 346 1.18e-20 93.6
MS.gene69291.t1 AT2G23540 29.551 379 217 19 81 434 18 371 1.32e-20 93.6
MS.gene69291.t1 AT5G03820 25.936 374 233 17 78 432 1 349 1.85e-20 92.8
MS.gene69291.t1 AT1G59406 27.647 340 203 14 110 433 30 342 1.85e-20 92.8
MS.gene69291.t1 AT1G59030 27.647 340 203 14 110 433 30 342 1.85e-20 92.8
MS.gene69291.t1 AT1G58725 27.647 340 203 14 110 433 30 342 1.85e-20 92.8
MS.gene69291.t1 AT1G75920 26.582 316 191 11 129 433 23 308 4.36e-20 91.3
MS.gene69291.t1 AT1G75920 26.178 382 217 14 81 433 1 346 7.36e-20 90.9
MS.gene69291.t1 AT3G14210 27.697 343 197 15 106 431 32 340 8.99e-20 91.3
MS.gene69291.t1 AT2G30220 27.049 366 218 15 85 428 7 345 2.15e-19 89.7
MS.gene69291.t1 AT1G58430 25.613 367 234 16 80 431 8 350 3.35e-19 89.4
MS.gene69291.t1 AT3G09930 26.979 341 206 12 101 427 30 341 3.62e-19 89.0
MS.gene69291.t1 AT3G09930 26.979 341 206 12 101 427 30 341 3.62e-19 89.0
MS.gene69291.t1 AT1G53990 24.533 375 234 15 80 435 5 349 1.05e-18 87.8
MS.gene69291.t1 AT1G29670 27.795 331 203 16 112 429 34 341 2.46e-18 86.7
MS.gene69291.t1 AT5G18430 24.928 349 218 13 109 438 27 350 3.10e-18 86.3
MS.gene69291.t1 AT5G33370 25.664 339 218 13 109 434 29 346 3.99e-18 85.9
MS.gene69291.t1 AT1G53940 30.686 277 161 11 109 371 38 297 4.75e-18 85.1
MS.gene69291.t1 AT1G58520 26.844 339 200 13 110 433 30 335 5.61e-18 85.5
MS.gene69291.t1 AT1G58525 26.844 339 200 13 110 433 30 335 5.61e-18 85.5
MS.gene69291.t1 AT2G24560 25.333 375 246 15 80 442 8 360 7.31e-18 85.1
MS.gene69291.t1 AT1G29670 28.097 331 202 16 112 429 102 409 9.69e-18 85.5
MS.gene69291.t1 AT2G19010 26.301 365 219 14 92 439 8 339 1.41e-17 84.3
MS.gene69291.t1 AT2G19010 26.110 383 227 15 80 439 20 369 1.51e-17 84.3
MS.gene69291.t1 AT5G37690 24.551 334 210 13 114 431 31 338 5.38e-17 82.4
MS.gene69291.t1 AT1G71691 27.035 344 213 14 110 439 55 374 9.42e-17 82.0
MS.gene69291.t1 AT2G19050 26.136 352 200 14 112 441 33 346 1.69e-16 80.9
MS.gene69291.t1 AT5G03610 24.185 368 235 12 84 433 9 350 2.45e-16 80.5
MS.gene69291.t1 AT3G14820 26.048 334 213 15 110 432 32 342 2.88e-16 80.5
MS.gene69291.t1 AT5G15720 27.798 277 171 11 110 371 30 292 9.77e-16 78.2
MS.gene69291.t1 AT5G41890 26.361 349 209 15 112 434 33 359 1.22e-15 78.6
MS.gene69291.t1 AT2G19060 26.286 350 196 15 112 437 32 343 2.20e-15 77.8
MS.gene69291.t1 AT1G33811 26.361 349 215 18 111 439 35 361 2.36e-15 77.8
MS.gene69291.t1 AT3G53100 23.881 335 223 13 110 432 29 343 3.91e-15 77.0
MS.gene69291.t1 AT1G74460 25.519 337 213 13 112 433 25 338 9.81e-15 75.9
MS.gene69291.t1 AT5G03600 24.251 367 229 12 73 427 13 342 1.11e-14 75.5
MS.gene69291.t1 AT3G14220 23.304 339 211 13 111 434 33 337 1.48e-14 75.5
MS.gene69291.t1 AT1G75920 25.410 366 194 13 81 433 6 305 1.51e-14 74.7
MS.gene69291.t1 AT5G03600 24.551 334 206 10 105 427 9 307 1.95e-14 74.3
MS.gene69291.t1 AT2G36325 25.075 335 207 13 111 432 48 351 2.32e-14 74.7
MS.gene69291.t1 AT1G71691 28.295 258 156 10 110 355 55 295 8.78e-14 72.4
MS.gene69291.t1 AT4G30140 25.581 344 202 15 112 439 35 340 1.52e-13 72.0
MS.gene69291.t1 AT5G15720 26.403 303 177 14 157 439 48 324 8.68e-13 69.7
MS.gene69291.t1 AT2G24560 25.879 313 204 14 80 380 8 304 1.58e-12 68.6
MS.gene69291.t1 AT5G37690 23.353 334 206 14 114 431 31 330 3.54e-12 67.8
MS.gene69291.t1 AT1G54030 21.713 327 211 12 109 427 51 340 1.17e-11 66.6
MS.gene69291.t1 AT2G04020 29.630 216 127 10 108 310 41 244 1.79e-11 64.7
MS.gene69291.t1 AT2G04020 30.189 212 123 10 108 306 41 240 8.44e-11 63.5

Find 102 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTCAAAACTAATAAAT+TGG 0.141859 3.2:-63301673 MS.gene69291:CDS
TTCTTTGGTGTTACACAATA+AGG 0.159526 3.2:+63302575 None:intergenic
CATGATGTTGTGTAGGGTTC+TGG 0.225739 3.2:+63304047 None:intergenic
AAAGAAGACTATGATGAATT+TGG 0.241383 3.2:-63302062 MS.gene69291:CDS
TCGCAGTTCTGAAATAGTTT+TGG 0.269806 3.2:+63302382 None:intergenic
AGTTAGGACAAAACCTTCTT+TGG 0.290406 3.2:+63302560 None:intergenic
TATCAAGCACCACAACAATT+TGG 0.294441 3.2:-63301906 MS.gene69291:intron
CCCAGAGATATGGGTCCTTA+TGG 0.303014 3.2:-63303078 MS.gene69291:CDS
ATTTGATTACCCCAGAGATA+TGG 0.312920 3.2:-63303088 MS.gene69291:CDS
CATTAAATGTGCAATTTGAT+TGG 0.321915 3.2:-63302614 MS.gene69291:CDS
CTGCGCACCCTCCTGTTAGA+AGG 0.342640 3.2:-63304111 MS.gene69291:CDS
TATGAAGCCATCTTCAACTT+TGG 0.350482 3.2:-63303141 MS.gene69291:CDS
GGTGATTCCGTAAGTGATAC+TGG 0.357764 3.2:-63303120 MS.gene69291:CDS
TTTAATGAGTTATCTTTCTC+TGG 0.377478 3.2:+63302630 None:intergenic
GCGAGAGATAGTTCCCTTGA+TGG 0.382382 3.2:-63302363 MS.gene69291:CDS
AAATATTGATCATGATGATA+TGG 0.391792 3.2:+63301728 None:intergenic
TCTTTGGTGTTACACAATAA+GGG 0.393980 3.2:+63302576 None:intergenic
GCGGTAGAGCTAGTGGTTCC+AGG 0.394718 3.2:-63302140 MS.gene69291:CDS
TTGTTTATAGTGGGAGAGAT+TGG 0.397836 3.2:-63302431 MS.gene69291:CDS
GGCTGAGCAGCAGGCGGTAC+CGG 0.397886 3.2:-63303984 MS.gene69291:CDS
CAGCCGCGTCCCCTTCTAAC+AGG 0.408535 3.2:+63304100 None:intergenic
TATTTGCTTATAAGCGGCTT+CGG 0.415948 3.2:+63301634 None:intergenic
AGTTATCTTTCTCTGGTGTA+AGG 0.416314 3.2:+63302637 None:intergenic
CGACTAATCATAGACTTCAT+AGG 0.419613 3.2:-63303012 MS.gene69291:intron
TTTGATTACCCCAGAGATAT+GGG 0.419732 3.2:-63303087 MS.gene69291:CDS
GAAGGGTGAGGCTGAGCAGC+AGG 0.424746 3.2:-63303993 MS.gene69291:CDS
TAAACTATCTTGAAAGGAGC+AGG 0.432894 3.2:+63301566 None:intergenic
TCCTTCAAAACTAATAAATT+GGG 0.433608 3.2:-63301672 MS.gene69291:CDS
GATGCCAAGTGCAGTTGAAC+CGG 0.439072 3.2:+63302683 None:intergenic
AATATACTATCTTAGCTTGT+GGG 0.439870 3.2:+63301958 None:intergenic
ACCATAAGGACCCATATCTC+TGG 0.443546 3.2:+63303077 None:intergenic
TTTAGAGAAGGATATGCAAA+AGG 0.444049 3.2:+63301590 None:intergenic
CCTGCCTACCCGTGCACTCA+TGG 0.444317 3.2:+63304138 None:intergenic
TTAACTGTAGCTGAGGCATA+TGG 0.452881 3.2:-63302783 MS.gene69291:intron
ATGACGATCTTCATTCTCTT+CGG 0.457193 3.2:-63303222 MS.gene69291:CDS
ATAGCTAAAGGTTTAATTGA+AGG 0.457396 3.2:-63301614 MS.gene69291:CDS
TATCAGGCTTTAATTGAAGA+AGG 0.458250 3.2:-63302164 MS.gene69291:intron
GAGTGCACGGGTAGGCAGGC+AGG 0.459642 3.2:-63304134 MS.gene69291:CDS
ATAGAAAGATAGCAAAGAAC+TGG 0.464096 3.2:+63303252 None:intergenic
TTTGATTGAATCAACCATCA+AGG 0.470104 3.2:+63302349 None:intergenic
CCATGAGTGCACGGGTAGGC+AGG 0.471500 3.2:-63304138 MS.gene69291:CDS
ATGATGTTGTGTAGGGTTCT+GGG 0.471592 3.2:+63304048 None:intergenic
GCATCGGGACGCATGTCAAA+TGG 0.472663 3.2:-63303036 MS.gene69291:CDS
TTAAAGTACGTTGAACCATA+AGG 0.472963 3.2:+63303063 None:intergenic
TGCGCACCCTCCTGTTAGAA+GGG 0.480156 3.2:-63304110 MS.gene69291:CDS
AACGTACTTTAAACATGCAT+CGG 0.490676 3.2:-63303052 MS.gene69291:CDS
CACCCCATTGGAAAGTTCCC+TGG 0.497541 3.2:+63302122 None:intergenic
ACCGGTCTGGGTGCAAACTC+CGG 0.499638 3.2:+63303965 None:intergenic
GCTTATAAGCAAATAGCTAA+AGG 0.500430 3.2:-63301626 MS.gene69291:CDS
TTATTGTGTAACACCAAAGA+AGG 0.504644 3.2:-63302573 MS.gene69291:intron
AAAGCATGTTGTGGAGGAAG+TGG 0.510426 3.2:-63301752 MS.gene69291:CDS
ACGTACTTTAAACATGCATC+GGG 0.510518 3.2:-63303051 MS.gene69291:CDS
GTTCCAGGGAACTTTCCAAT+GGG 0.514992 3.2:-63302125 MS.gene69291:CDS
TTTATAGTGGGAGAGATTGG+TGG 0.518109 3.2:-63302428 MS.gene69291:CDS
GGAATCACCAAAGTTGAAGA+TGG 0.520045 3.2:+63303134 None:intergenic
ATCAAATATTTCAGTGGCAG+TGG 0.522457 3.2:-63302663 MS.gene69291:CDS
TTGATTGAATCAACCATCAA+GGG 0.523996 3.2:+63302350 None:intergenic
TTTAGCTATTTGCTTATAAG+CGG 0.529705 3.2:+63301628 None:intergenic
CCATAAGGACCCATATCTCT+GGG 0.530553 3.2:+63303078 None:intergenic
TGTGCAGCCGCAACATCAGA+AGG 0.532548 3.2:-63304011 MS.gene69291:CDS
GGCTCCTCATGATGTTGTGT+AGG 0.532639 3.2:+63304040 None:intergenic
CGCGGCTGCGAACGTAAGAG+TGG 0.536319 3.2:-63304085 MS.gene69291:CDS
AGCATTTCCAGTATCACTTA+CGG 0.536373 3.2:+63303113 None:intergenic
TGCGAACGTAAGAGTGGGGA+GGG 0.543513 3.2:-63304079 MS.gene69291:CDS
TGATTCTAAACTATCTTGAA+AGG 0.547988 3.2:+63301560 None:intergenic
AAATATACTATCTTAGCTTG+TGG 0.550904 3.2:+63301957 None:intergenic
AAGATGGCTTCATACGGTAG+AGG 0.556476 3.2:+63303150 None:intergenic
CCGCGTCCCCTTCTAACAGG+AGG 0.558030 3.2:+63304103 None:intergenic
TTGGTGACATTCTTATAGGC+CGG 0.562861 3.2:+63302747 None:intergenic
GGTTCCAGGGAACTTTCCAA+TGG 0.563863 3.2:-63302126 MS.gene69291:CDS
GCCTCACCCTTCTGATGTTG+CGG 0.570914 3.2:+63304004 None:intergenic
ACCGGAGTTTGCACCCAGAC+CGG 0.571429 3.2:-63303966 MS.gene69291:intron
GCCGCAACATCAGAAGGGTG+AGG 0.573069 3.2:-63304005 MS.gene69291:CDS
CGGTAGAGCTAGTGGTTCCA+GGG 0.577023 3.2:-63302139 MS.gene69291:CDS
GCTCCTCATGATGTTGTGTA+GGG 0.577224 3.2:+63304041 None:intergenic
CGCGTCCCCTTCTAACAGGA+GGG 0.579746 3.2:+63304104 None:intergenic
TTAGAGAAGGATATGCAAAA+GGG 0.585091 3.2:+63301591 None:intergenic
AGAAGGAGCGGTAGAGCTAG+TGG 0.586129 3.2:-63302147 MS.gene69291:CDS
AGACGATGACCATGAGTGCA+CGG 0.589355 3.2:-63304147 None:intergenic
GCGGCTGCGAACGTAAGAGT+GGG 0.590041 3.2:-63304084 MS.gene69291:CDS
TATGCCGGTTCAACTGCACT+TGG 0.594009 3.2:-63302687 MS.gene69291:CDS
GGCTTTAATTGAAGAAGGAG+CGG 0.599772 3.2:-63302159 MS.gene69291:CDS
ATGTCAGTATTACACCCCAT+TGG 0.600994 3.2:+63302110 None:intergenic
AAGTTGAAGATGGCTTCATA+CGG 0.604507 3.2:+63303144 None:intergenic
CTCCACCCACCAAATTGTTG+TGG 0.605350 3.2:+63301897 None:intergenic
GACGATGACCATGAGTGCAC+GGG 0.609395 3.2:-63304146 None:intergenic
CCTCCTGTTAGAAGGGGACG+CGG 0.614061 3.2:-63304103 MS.gene69291:CDS
TCAAAACTAATAAATTGGGA+TGG 0.614495 3.2:-63301668 MS.gene69291:CDS
GCGCACCCTCCTGTTAGAAG+GGG 0.616191 3.2:-63304109 MS.gene69291:CDS
TGTTGCGGCTGCACATGCTG+AGG 0.618209 3.2:+63304019 None:intergenic
CTTGGCATCAAATATTTCAG+TGG 0.619832 3.2:-63302669 MS.gene69291:CDS
AAGAATGTCACCAAAACCCA+TGG 0.619842 3.2:-63302738 MS.gene69291:CDS
CTGCGAACGTAAGAGTGGGG+AGG 0.633142 3.2:-63304080 MS.gene69291:CDS
GGGTGAGGCTGAGCAGCAGG+CGG 0.634220 3.2:-63303990 MS.gene69291:CDS
TTCCAGGGAACTTTCCAATG+GGG 0.642288 3.2:-63302124 MS.gene69291:CDS
GAACCCTACACAACATCATG+AGG 0.656698 3.2:-63304044 MS.gene69291:CDS
GCGAACGTAAGAGTGGGGAG+GGG 0.663322 3.2:-63304078 MS.gene69291:CDS
GTGCAGCCGCAACATCAGAA+GGG 0.670237 3.2:-63304010 MS.gene69291:CDS
CGGCTGCGAACGTAAGAGTG+GGG 0.681221 3.2:-63304083 MS.gene69291:CDS
GAAGAGAATGAAGATCGTCA+TGG 0.696059 3.2:+63303224 None:intergenic
ATGACCATGAGTGCACGGGT+AGG 0.704658 3.2:-63304142 MS.gene69291:CDS
CATAAGGACCCATATCTCTG+GGG 0.759622 3.2:+63303079 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTAATTATGTTTATC+AGG - chr3.2:63303527-63303546 MS.gene69291:intron 10.0%
!!! AAAATATTATTTAAGATAAC+AGG + chr3.2:63301826-63301845 None:intergenic 10.0%
!!! TATATTGTTTTAGATAATTT+AGG - chr3.2:63302233-63302252 MS.gene69291:intron 10.0%
!!! TTTCACTTTTTTTTTTTTTT+AGG + chr3.2:63301992-63302011 None:intergenic 10.0%
!! TATCAAATAAATAACAATCT+TGG - chr3.2:63303488-63303507 MS.gene69291:intron 15.0%
!!! ACTATTTTAATTTCTTTTGT+GGG - chr3.2:63302144-63302163 MS.gene69291:CDS 15.0%
!!! TACTATTTTAATTTCTTTTG+TGG - chr3.2:63302143-63302162 MS.gene69291:CDS 15.0%
!!! TTATTTTTGTATTCATGAAA+TGG - chr3.2:63302751-63302770 MS.gene69291:CDS 15.0%
!! AAAAAGTCATTGTTTATAGT+GGG - chr3.2:63303267-63303286 MS.gene69291:CDS 20.0%
!! AAATATTGATCATGATGATA+TGG + chr3.2:63303982-63304001 None:intergenic 20.0%
!! AGAAATAAAAGAATGTGTAA+AGG + chr3.2:63302723-63302742 None:intergenic 20.0%
!! ATCCTTCAAAACTAATAAAT+TGG - chr3.2:63304034-63304053 MS.gene69291:CDS 20.0%
!! ATTCATTAATGATTATGCTT+TGG - chr3.2:63302285-63302304 MS.gene69291:intron 20.0%
!! GTAATTAAATGTTTGAGTAT+TGG - chr3.2:63303413-63303432 MS.gene69291:intron 20.0%
!! TAATCAATGAAAACTTAACA+TGG + chr3.2:63303850-63303869 None:intergenic 20.0%
!! TCCTTCAAAACTAATAAATT+GGG - chr3.2:63304035-63304054 MS.gene69291:CDS 20.0%
!!! AAGTTTTGTATAACATACAA+TGG + chr3.2:63303391-63303410 None:intergenic 20.0%
!!! AATTATTGTGTTTGAGTTAT+AGG - chr3.2:63303462-63303481 MS.gene69291:intron 20.0%
!!! ATAGATTATTTTAGAGTTCT+TGG + chr3.2:63302821-63302840 None:intergenic 20.0%
! AAAAAGTGAAATATCATCTG+TGG - chr3.2:63302001-63302020 MS.gene69291:CDS 25.0%
! AAAAGTGAAATATCATCTGT+GGG - chr3.2:63302002-63302021 MS.gene69291:CDS 25.0%
! AAAGAAGACTATGATGAATT+TGG - chr3.2:63303645-63303664 MS.gene69291:intron 25.0%
! AAGATATCTATTTGTTTGAG+AGG - chr3.2:63302170-63302189 MS.gene69291:intron 25.0%
! AATGAACATAAATTAGTGCA+TGG + chr3.2:63303896-63303915 None:intergenic 25.0%
! ATAGCTAAAGGTTTAATTGA+AGG - chr3.2:63304093-63304112 MS.gene69291:CDS 25.0%
! ATGAACATAAATTAGTGCAT+GGG + chr3.2:63303895-63303914 None:intergenic 25.0%
! CAAAAAGTCATTGTTTATAG+TGG - chr3.2:63303266-63303285 MS.gene69291:CDS 25.0%
! CATTAAATGTGCAATTTGAT+TGG - chr3.2:63303093-63303112 MS.gene69291:CDS 25.0%
! TCAAAACTAATAAATTGGGA+TGG - chr3.2:63304039-63304058 MS.gene69291:CDS 25.0%
! TCTATTATACTCACACAAAA+GGG + chr3.2:63302062-63302081 None:intergenic 25.0%
! TGCAAATATGTGGAAATTTA+TGG - chr3.2:63302025-63302044 MS.gene69291:CDS 25.0%
! TTCTATTATACTCACACAAA+AGG + chr3.2:63302063-63302082 None:intergenic 25.0%
! TTTAATGAGTTATCTTTCTC+TGG + chr3.2:63303080-63303099 None:intergenic 25.0%
! TTTAGCTATTTGCTTATAAG+CGG + chr3.2:63304082-63304101 None:intergenic 25.0%
! TTTATGTTCATTAATGATGC+AGG - chr3.2:63303904-63303923 MS.gene69291:intron 25.0%
!! AAATATACTATCTTAGCTTG+TGG + chr3.2:63303753-63303772 None:intergenic 25.0%
!! TTTTGTATAACATACAATGG+TGG + chr3.2:63303388-63303407 None:intergenic 25.0%
!!! AATATACTATCTTAGCTTGT+GGG + chr3.2:63303752-63303771 None:intergenic 25.0%
!!! ATTATTTTAGAGTTCTTGGT+AGG + chr3.2:63302817-63302836 None:intergenic 25.0%
!!! ATTTTAATTTCTTTTGTGGG+TGG - chr3.2:63302147-63302166 MS.gene69291:CDS 25.0%
!!! CATCATGATCAATATTTTTG+TGG - chr3.2:63303985-63304004 MS.gene69291:CDS 25.0%
!!! GATTTCTCTAATTTTTTAGC+TGG + chr3.2:63302359-63302378 None:intergenic 25.0%
!!! TCCCAATTTATTAGTTTTGA+AGG + chr3.2:63304039-63304058 None:intergenic 25.0%
!!! TTGTTATGATCTCTAGTTTT+AGG - chr3.2:63302101-63302120 MS.gene69291:CDS 25.0%
!!! TTTCTGTTTTATTGTCTCTA+TGG + chr3.2:63303727-63303746 None:intergenic 25.0%
AACCCATGGTGATATAAAAA+AGG - chr3.2:63302983-63303002 MS.gene69291:intron 30.0%
AACGTACTTTAAACATGCAT+CGG - chr3.2:63302655-63302674 MS.gene69291:CDS 30.0%
ACCCATGGTGATATAAAAAA+GGG - chr3.2:63302984-63303003 MS.gene69291:intron 30.0%
AGTAGAAGCAACATATTAGT+AGG + chr3.2:63301783-63301802 None:intergenic 30.0%
ATAGAAAGATAGCAAAGAAC+TGG + chr3.2:63302458-63302477 None:intergenic 30.0%
ATCGTTTCATAACAGGATAA+AGG - chr3.2:63302376-63302395 MS.gene69291:CDS 30.0%
GCTTATAAGCAAATAGCTAA+AGG - chr3.2:63304081-63304100 MS.gene69291:CDS 30.0%
GTAGAAGCAACATATTAGTA+GGG + chr3.2:63301782-63301801 None:intergenic 30.0%
TAGAAGCAACATATTAGTAG+GGG + chr3.2:63301781-63301800 None:intergenic 30.0%
TAGAGAAATCGTTTCATAAC+AGG - chr3.2:63302369-63302388 MS.gene69291:CDS 30.0%
TTAAAGTACGTTGAACCATA+AGG + chr3.2:63302647-63302666 None:intergenic 30.0%
TTAGAGAAGGATATGCAAAA+GGG + chr3.2:63304119-63304138 None:intergenic 30.0%
TTATTGTGTAACACCAAAGA+AGG - chr3.2:63303134-63303153 MS.gene69291:CDS 30.0%
TTGATTGAATCAACCATCAA+GGG + chr3.2:63303360-63303379 None:intergenic 30.0%
TTTAGAGAAGGATATGCAAA+AGG + chr3.2:63304120-63304139 None:intergenic 30.0%
TTTGATTGAATCAACCATCA+AGG + chr3.2:63303361-63303380 None:intergenic 30.0%
! TATCAGGCTTTAATTGAAGA+AGG - chr3.2:63303543-63303562 MS.gene69291:intron 30.0%
! TTTTATATCACCATGGGTTT+TGG + chr3.2:63302982-63303001 None:intergenic 30.0%
!! TCTTTGGTGTTACACAATAA+GGG + chr3.2:63303134-63303153 None:intergenic 30.0%
!! TTCTTTGGTGTTACACAATA+AGG + chr3.2:63303135-63303154 None:intergenic 30.0%
!!! ATATGGTTTGCCATTTTTAC+CGG - chr3.2:63302941-63302960 MS.gene69291:intron 30.0%
!!! CTGAAATAGTTTTGGAAAGA+TGG + chr3.2:63303320-63303339 None:intergenic 30.0%
!!! TCCCTTTTTTATATCACCAT+GGG + chr3.2:63302988-63303007 None:intergenic 30.0%
AAGTTGAAGATGGCTTCATA+CGG + chr3.2:63302566-63302585 None:intergenic 35.0%
ACGTACTTTAAACATGCATC+GGG - chr3.2:63302656-63302675 MS.gene69291:CDS 35.0%
AGCATTTCCAGTATCACTTA+CGG + chr3.2:63302597-63302616 None:intergenic 35.0%
AGTTAGGACAAAACCTTCTT+TGG + chr3.2:63303150-63303169 None:intergenic 35.0%
AGTTATCTTTCTCTGGTGTA+AGG + chr3.2:63303073-63303092 None:intergenic 35.0%
ATCAAATATTTCAGTGGCAG+TGG - chr3.2:63303044-63303063 MS.gene69291:CDS 35.0%
ATGACGATCTTCATTCTCTT+CGG - chr3.2:63302485-63302504 MS.gene69291:intron 35.0%
ATTTGATTACCCCAGAGATA+TGG - chr3.2:63302619-63302638 MS.gene69291:CDS 35.0%
CGACTAATCATAGACTTCAT+AGG - chr3.2:63302695-63302714 MS.gene69291:CDS 35.0%
CTTGGCATCAAATATTTCAG+TGG - chr3.2:63303038-63303057 MS.gene69291:CDS 35.0%
TAAACTATCTTGAAAGGAGC+AGG + chr3.2:63304144-63304163 None:intergenic 35.0%
TATCAAGCACCACAACAATT+TGG - chr3.2:63303801-63303820 MS.gene69291:intron 35.0%
TATGAAGCCATCTTCAACTT+TGG - chr3.2:63302566-63302585 MS.gene69291:intron 35.0%
TATTTGCTTATAAGCGGCTT+CGG + chr3.2:63304076-63304095 None:intergenic 35.0%
TTCTTATAGGCCGGTAAAAA+TGG + chr3.2:63302954-63302973 None:intergenic 35.0%
TTTGATTACCCCAGAGATAT+GGG - chr3.2:63302620-63302639 MS.gene69291:CDS 35.0%
! GGAGTTAATTTTGCTTATGC+CGG - chr3.2:63303005-63303024 MS.gene69291:intron 35.0%
! TTGTTTATAGTGGGAGAGAT+TGG - chr3.2:63303276-63303295 MS.gene69291:intron 35.0%
!! ATTTTGAAAGCATGTTGTGG+AGG - chr3.2:63303949-63303968 MS.gene69291:intron 35.0%
!! GAGATTTTGAAAGCATGTTG+TGG - chr3.2:63303946-63303965 MS.gene69291:intron 35.0%
!! GGTTTTGGTGACATTCTTAT+AGG + chr3.2:63302967-63302986 None:intergenic 35.0%
!!! CTCCCTTTTTTATATCACCA+TGG + chr3.2:63302989-63303008 None:intergenic 35.0%
!!! TCGCAGTTCTGAAATAGTTT+TGG + chr3.2:63303328-63303347 None:intergenic 35.0%
AAAGTAGCAAGCAAGGAGTT+AGG + chr3.2:63303166-63303185 None:intergenic 40.0%
AAGAATGTCACCAAAACCCA+TGG - chr3.2:63302969-63302988 MS.gene69291:intron 40.0%
AAGCACCACAACAATTTGGT+GGG - chr3.2:63303805-63303824 MS.gene69291:intron 40.0%
ATGATGTTGTGTAGGGTTCT+GGG + chr3.2:63301662-63301681 None:intergenic 40.0%
ATGTCAGTATTACACCCCAT+TGG + chr3.2:63303600-63303619 None:intergenic 40.0%
GAAGAGAATGAAGATCGTCA+TGG + chr3.2:63302486-63302505 None:intergenic 40.0%
GGAATCACCAAAGTTGAAGA+TGG + chr3.2:63302576-63302595 None:intergenic 40.0%
TCACACAAAAGTAGCAAGCA+AGG + chr3.2:63303173-63303192 None:intergenic 40.0%
TCCAAAAAACTAACCGGTCT+GGG + chr3.2:63301757-63301776 None:intergenic 40.0%
TCCAAAAAGCTCACATGCAA+AGG + chr3.2:63302516-63302535 None:intergenic 40.0%
TCTCATGTTAACTGTAGCTG+AGG - chr3.2:63302917-63302936 MS.gene69291:intron 40.0%
TTAACTGTAGCTGAGGCATA+TGG - chr3.2:63302924-63302943 MS.gene69291:intron 40.0%
! ACCTTTGCATGTGAGCTTTT+TGG - chr3.2:63302512-63302531 MS.gene69291:intron 40.0%
! GGCTTTAATTGAAGAAGGAG+CGG - chr3.2:63303548-63303567 MS.gene69291:intron 40.0%
! TTGGTGACATTCTTATAGGC+CGG + chr3.2:63302963-63302982 None:intergenic 40.0%
! TTTATAGTGGGAGAGATTGG+TGG - chr3.2:63303279-63303298 MS.gene69291:intron 40.0%
!!! AAAGGAGCAGGTTTTAGAGA+AGG + chr3.2:63304132-63304151 None:intergenic 40.0%
AAAGCATGTTGTGGAGGAAG+TGG - chr3.2:63303955-63303974 MS.gene69291:intron 45.0%
AAGATGGCTTCATACGGTAG+AGG + chr3.2:63302560-63302579 None:intergenic 45.0%
ACCATAAGGACCCATATCTC+TGG + chr3.2:63302633-63302652 None:intergenic 45.0%
AGGGGCTCCAAAAAACTAAC+CGG + chr3.2:63301763-63301782 None:intergenic 45.0%
CAAGCACCACAACAATTTGG+TGG - chr3.2:63303804-63303823 MS.gene69291:intron 45.0%
CATAAGGACCCATATCTCTG+GGG + chr3.2:63302631-63302650 None:intergenic 45.0%
CATCTGTGGGTGCAAATATG+TGG - chr3.2:63302015-63302034 MS.gene69291:CDS 45.0%
CATGATGTTGTGTAGGGTTC+TGG + chr3.2:63301663-63301682 None:intergenic 45.0%
CCATAAGGACCCATATCTCT+GGG + chr3.2:63302632-63302651 None:intergenic 45.0%
CTCCAAAAAACTAACCGGTC+TGG + chr3.2:63301758-63301777 None:intergenic 45.0%
GAACCCTACACAACATCATG+AGG - chr3.2:63301663-63301682 MS.gene69291:CDS 45.0%
GCTCCTCATGATGTTGTGTA+GGG + chr3.2:63301669-63301688 None:intergenic 45.0%
GGTGATTCCGTAAGTGATAC+TGG - chr3.2:63302587-63302606 MS.gene69291:CDS 45.0%
GTTCCAGGGAACTTTCCAAT+GGG - chr3.2:63303582-63303601 MS.gene69291:intron 45.0%
TTCCAGGGAACTTTCCAATG+GGG - chr3.2:63303583-63303602 MS.gene69291:intron 45.0%
!!! ACCCAGACCGGTTAGTTTTT+TGG - chr3.2:63301753-63301772 MS.gene69291:CDS 45.0%
CCCAGAGATATGGGTCCTTA+TGG - chr3.2:63302629-63302648 MS.gene69291:CDS 50.0%
CTCCACCCACCAAATTGTTG+TGG + chr3.2:63303813-63303832 None:intergenic 50.0%
GATGCCAAGTGCAGTTGAAC+CGG + chr3.2:63303027-63303046 None:intergenic 50.0%
GCGAGAGATAGTTCCCTTGA+TGG - chr3.2:63303344-63303363 MS.gene69291:intron 50.0%
GGCTCCTCATGATGTTGTGT+AGG + chr3.2:63301670-63301689 None:intergenic 50.0%
GGTTCCAGGGAACTTTCCAA+TGG - chr3.2:63303581-63303600 MS.gene69291:intron 50.0%
! CACCACAACAATTTGGTGGG+TGG - chr3.2:63303808-63303827 MS.gene69291:intron 50.0%
!! TATGCCGGTTCAACTGCACT+TGG - chr3.2:63303020-63303039 MS.gene69291:CDS 50.0%
AGAAGGAGCGGTAGAGCTAG+TGG - chr3.2:63303560-63303579 MS.gene69291:intron 55.0%
ATGACCATGAGTGCACGGGT+AGG - chr3.2:63301565-63301584 MS.gene69291:CDS 55.0%
CACCCCATTGGAAAGTTCCC+TGG + chr3.2:63303588-63303607 None:intergenic 55.0%
CGGTAGAGCTAGTGGTTCCA+GGG - chr3.2:63303568-63303587 MS.gene69291:intron 55.0%
GCATCGGGACGCATGTCAAA+TGG - chr3.2:63302671-63302690 MS.gene69291:CDS 55.0%
GCCTCACCCTTCTGATGTTG+CGG + chr3.2:63301706-63301725 None:intergenic 55.0%
GTGCAGCCGCAACATCAGAA+GGG - chr3.2:63301697-63301716 MS.gene69291:CDS 55.0%
TGCGAACGTAAGAGTGGGGA+GGG - chr3.2:63301628-63301647 MS.gene69291:CDS 55.0%
TGCGCACCCTCCTGTTAGAA+GGG - chr3.2:63301597-63301616 MS.gene69291:CDS 55.0%
TGTGCAGCCGCAACATCAGA+AGG - chr3.2:63301696-63301715 MS.gene69291:CDS 55.0%
ACCGGAGTTTGCACCCAGAC+CGG - chr3.2:63301741-63301760 MS.gene69291:CDS 60.0%
ACCGGTCTGGGTGCAAACTC+CGG + chr3.2:63301745-63301764 None:intergenic 60.0%
CCTCCTGTTAGAAGGGGACG+CGG - chr3.2:63301604-63301623 MS.gene69291:CDS 60.0%
CGCGTCCCCTTCTAACAGGA+GGG + chr3.2:63301606-63301625 None:intergenic 60.0%
CGGCTGCGAACGTAAGAGTG+GGG - chr3.2:63301624-63301643 MS.gene69291:CDS 60.0%
CTGCGAACGTAAGAGTGGGG+AGG - chr3.2:63301627-63301646 MS.gene69291:CDS 60.0%
CTGCGCACCCTCCTGTTAGA+AGG - chr3.2:63301596-63301615 MS.gene69291:CDS 60.0%
GCCGCAACATCAGAAGGGTG+AGG - chr3.2:63301702-63301721 MS.gene69291:CDS 60.0%
GCGAACGTAAGAGTGGGGAG+GGG - chr3.2:63301629-63301648 MS.gene69291:CDS 60.0%
GCGCACCCTCCTGTTAGAAG+GGG - chr3.2:63301598-63301617 MS.gene69291:CDS 60.0%
GCGGCTGCGAACGTAAGAGT+GGG - chr3.2:63301623-63301642 MS.gene69291:CDS 60.0%
GCGGTAGAGCTAGTGGTTCC+AGG - chr3.2:63303567-63303586 MS.gene69291:intron 60.0%
TGTTGCGGCTGCACATGCTG+AGG + chr3.2:63301691-63301710 None:intergenic 60.0%
CAGCCGCGTCCCCTTCTAAC+AGG + chr3.2:63301610-63301629 None:intergenic 65.0%
CCATGAGTGCACGGGTAGGC+AGG - chr3.2:63301569-63301588 MS.gene69291:CDS 65.0%
CCGCGTCCCCTTCTAACAGG+AGG + chr3.2:63301607-63301626 None:intergenic 65.0%
CCTGCCTACCCGTGCACTCA+TGG + chr3.2:63301572-63301591 None:intergenic 65.0%
CGCGGCTGCGAACGTAAGAG+TGG - chr3.2:63301622-63301641 MS.gene69291:CDS 65.0%
GAAGGGTGAGGCTGAGCAGC+AGG - chr3.2:63301714-63301733 MS.gene69291:CDS 65.0%
GAGTGCACGGGTAGGCAGGC+AGG - chr3.2:63301573-63301592 MS.gene69291:CDS 70.0%
GGCTGAGCAGCAGGCGGTAC+CGG - chr3.2:63301723-63301742 MS.gene69291:CDS 70.0%
GGGTGAGGCTGAGCAGCAGG+CGG - chr3.2:63301717-63301736 MS.gene69291:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 63301565 63304164 63301565 ID=MS.gene69291
chr3.2 mRNA 63301565 63304164 63301565 ID=MS.gene69291.t1;Parent=MS.gene69291
chr3.2 exon 63303967 63304164 63303967 ID=MS.gene69291.t1.exon1;Parent=MS.gene69291.t1
chr3.2 CDS 63303967 63304164 63303967 ID=cds.MS.gene69291.t1;Parent=MS.gene69291.t1
chr3.2 exon 63303013 63303286 63303013 ID=MS.gene69291.t1.exon2;Parent=MS.gene69291.t1
chr3.2 CDS 63303013 63303286 63303013 ID=cds.MS.gene69291.t1;Parent=MS.gene69291.t1
chr3.2 exon 63302574 63302795 63302574 ID=MS.gene69291.t1.exon3;Parent=MS.gene69291.t1
chr3.2 CDS 63302574 63302795 63302574 ID=cds.MS.gene69291.t1;Parent=MS.gene69291.t1
chr3.2 exon 63302337 63302479 63302337 ID=MS.gene69291.t1.exon4;Parent=MS.gene69291.t1
chr3.2 CDS 63302337 63302479 63302337 ID=cds.MS.gene69291.t1;Parent=MS.gene69291.t1
chr3.2 exon 63301907 63302180 63301907 ID=MS.gene69291.t1.exon5;Parent=MS.gene69291.t1
chr3.2 CDS 63301907 63302180 63301907 ID=cds.MS.gene69291.t1;Parent=MS.gene69291.t1
chr3.2 exon 63301565 63301803 63301565 ID=MS.gene69291.t1.exon6;Parent=MS.gene69291.t1
chr3.2 CDS 63301565 63301803 63301565 ID=cds.MS.gene69291.t1;Parent=MS.gene69291.t1
Gene Sequence

>MS.gene69291

ATGACCATGAGTGCACGGGTAGGCAGGCAGGCTGCGCACCCTCCTGTTAGAAGGGGACGCGGCTGCGAACGTAAGAGTGGGGAGGGGACGTCGTCCCAGAACCCTACACAACATCATGAGGAGCCTCAGCATGTGCAGCCGCAACATCAGAAGGGTGAGGCTGAGCAGCAGGCGGTACCGGAGTTTGCACCCAGACCGGTTAGTTTTTTGGAGCCCCTACTAATATGTTGCTTCTACTAAATTTTCGTAGACACAAAGCCTGTTATCTTAAATAATATTTTTTTAATTTTATTTAAATAATATTTTTTTTTACGATTCAACTGTTATCTTAAAATATTTATATGTTAATTTTTAATTATTGTTTTTTTAATAAAACAATAATTAAAACTAAAGTATTATGCTTCGAACTAACAACAAATTAAAACCTAAAAAAAAAAAAAAGTGAAATATCATCTGTGGGTGCAAATATGTGGAAATTTATGGAGCTATGAAAACCCTTTTGTGTGAGTATAATAGAATGATTAAAACTAGAAATTTTGTTATGATCTCTAGTTTTAGGATATGAATATTGTTATGATTACTATTTTAATTTCTTTTGTGGGTGGAAGATATCTATTTGTTTGAGAGGAGAAGATATCTAATTTTGTTATAATCTAATTTTAGTATATTATATTGTTTTAGATAATTTAGGTTTACAACAAACAAGCATAATCAATACACATTCATTAATGATTATGCTTTGGATATTTTAAGTTTACAACTTTACAAAAATAAAAATAGCAAAACAAGTTCCAGCTAAAAAATTAGAGAAATCGTTTCATAACAGGATAAAGGAGTAAGCGTGACAATATATAAAGATTATCAATCTCATTTTCTAGCAAAAATTAATACCAGTTCTTTGCTATCTTTCTATAAACACCATGACGATCTTCATTCTCTTCGGTATCACCTTTGCATGTGAGCTTTTTGGAAATTTCATTTCAAATGCTAATCCTCTACCGTATGAAGCCATCTTCAACTTTGGTGATTCCGTAAGTGATACTGGAAATGCTGCATTTGATTACCCCAGAGATATGGGTCCTTATGGTTCAACGTACTTTAAACATGCATCGGGACGCATGTCAAATGGACGACTAATCATAGACTTCATAGGTACCTTTACACATTCTTTTATTTCTTAAATAAATTATTTTTGTATTCATGAAATGGTAAATAACAAAATAAAAATAAAAAATAACAACAAAAATTTCCTACCAAGAACTCTAAAATAATCTATTTCATATAGTTGTTATAATTAAAATCAGTAATTTTTAATGTTGATACATTTCTGATTGACAAATTCACTAGCTCATTCTCATGTTAACTGTAGCTGAGGCATATGGTTTGCCATTTTTACCGGCCTATAAGAATGTCACCAAAACCCATGGTGATATAAAAAAGGGAGTTAATTTTGCTTATGCCGGTTCAACTGCACTTGGCATCAAATATTTCAGTGGCAGTGGAGTCCTTACACCAGAGAAAGATAACTCATTAAATGTGCAATTTGATTGGTTTAAGAAGCTAAAACCCTTATTGTGTAACACCAAAGAAGGTTTTGTCCTAACTCCTTGCTTGCTACTTTTGTGTGATATAAATGATTTATCATCTATAATACTAACAAAACTTTTTTTCTTGTGAGTTCACAGACTGTGATAGCTTCATCAAAAAGTCATTGTTTATAGTGGGAGAGATTGGTGGAAATGATATTTTTTACCATCTTTCCAAAACTATTTCAGAACTGCGAGAGATAGTTCCCTTGATGGTTGATTCAATCAAAAATACCACCATTGTATGTTATACAAAACTTAAGTAATTAAATGTTTGAGTATTGGAAAAAAAAAGTTTACTTCAATTGTAGAATTATTGTGTTTGAGTTATAGGTATTATCAAATAAATAACAATCTTGGAAAAAAGTAATTGATATTTATTTAATTATGTTTATCAGGCTTTAATTGAAGAAGGAGCGGTAGAGCTAGTGGTTCCAGGGAACTTTCCAATGGGGTGTAATACTGACATATTGTCAAAAAAGATTAGTCAGAAGAAAGAAGACTATGATGAATTTGGATGTTTGATAGCTTACAACACTCTCATCGAATACTTTAATGAGCAGCTAAAAAAATCCATAGAGACAATAAAACAGAAATACCCACAAGCTAAGATAGTATATTTTGACTATTACAACGATGCTAAACGTTTATATCAAGCACCACAACAATTTGGTGGGTGGAGCAATTATTTTCTTTCCATGTTAAGTTTTCATTGATTATTACTTTTCAAATTTATTTGATCCCATGCACTAATTTATGTTCATTAATGATGCAGGTTTTATTTCTGATAAAGTCGAGATTTTGAAAGCATGTTGTGGAGGAAGTGGACCATATCATCATGATCAATATTTTTGTGGAACGTCGAATACAACAATTTGCTCTGATCCTTCAAAACTAATAAATTGGGATGGTCAACACTTTACCGAAGCCGCTTATAAGCAAATAGCTAAAGGTTTAATTGAAGGCCCTTTTGCATATCCTTCTCTAAAACCTGCTCCTTTCAAGATAGTTTAG
Protein sequence

>MS.gene69291.t1

MTMSARVGRQAAHPPVRRGRGCERKSGEGTSSQNPTQHHEEPQHVQPQHQKGEAEQQAVPEFAPRPQKLIPVLCYLSINTMTIFILFGITFACELFGNFISNANPLPYEAIFNFGDSVSDTGNAAFDYPRDMGPYGSTYFKHASGRMSNGRLIIDFIAEAYGLPFLPAYKNVTKTHGDIKKGVNFAYAGSTALGIKYFSGSGVLTPEKDNSLNVQFDWFKKLKPLLCNTKEDCDSFIKKSLFIVGEIGGNDIFYHLSKTISELREIVPLMVDSIKNTTIALIEEGAVELVVPGNFPMGCNTDILSKKISQKKEDYDEFGCLIAYNTLIEYFNEQLKKSIETIKQKYPQAKIVYFDYYNDAKRLYQAPQQFGFISDKVEILKACCGGSGPYHHDQYFCGTSNTTICSDPSKLINWDGQHFTEAAYKQIAKGLIEGPFAYPSLKPAPFKIV