Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69525.t1 | XP_003599782.2 | 99.8 | 850 | 2 | 0 | 1 | 850 | 1 | 850 | 0.00E+00 | 1695.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69525.t1 | Q93VQ0 | 74.1 | 871 | 192 | 8 | 1 | 850 | 1 | 858 | 0.0e+00 | 1288.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69525.t1 | G7IXE7 | 99.8 | 850 | 2 | 0 | 1 | 850 | 1 | 850 | 0.0e+00 | 1695.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057987 | MS.gene69525 | 0.80856 | 2.92E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69525.t1 | MTR_3g046640 | 99.765 | 850 | 2 | 0 | 1 | 850 | 1 | 850 | 0.0 | 1751 |
| MS.gene69525.t1 | MTR_0071s0030 | 99.647 | 850 | 3 | 0 | 1 | 850 | 1 | 850 | 0.0 | 1748 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69525.t1 | AT2G38020 | 74.053 | 871 | 192 | 8 | 1 | 850 | 1 | 858 | 0.0 | 1328 |
| MS.gene69525.t1 | AT2G38020 | 74.755 | 816 | 179 | 5 | 1 | 796 | 1 | 809 | 0.0 | 1273 |
Find 220 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGTGAAAACAGAATTTA+AGG | 0.173476 | 3.1:-32960440 | MS.gene69525:intron |
| TGGATGCTGTTCTGCTTTAC+TGG | 0.199058 | 3.1:-32969961 | MS.gene69525:CDS |
| TTCTCGAGGGTCTGCAAGTT+TGG | 0.242669 | 3.1:+32958884 | None:intergenic |
| AGGATGTGGCATTTCTTCTT+TGG | 0.245760 | 3.1:-32961167 | MS.gene69525:CDS |
| CTTCTTCTCCTATGCTTAAC+AGG | 0.253059 | 3.1:+32965489 | None:intergenic |
| CGCGGTGAAGTTGGCTGATC+CGG | 0.270998 | 3.1:-32970973 | MS.gene69525:CDS |
| AGGCAACCGTTGGAGTTCTT+TGG | 0.274994 | 3.1:-32963745 | MS.gene69525:CDS |
| CACTCAGGAATAAGAATTAT+TGG | 0.279696 | 3.1:+32969878 | None:intergenic |
| TCTTAGTATTCAGCAATATA+AGG | 0.297573 | 3.1:-32968292 | MS.gene69525:intron |
| CTCCTAAGGGCAGCCAGTTA+TGG | 0.308461 | 3.1:-32968567 | MS.gene69525:CDS |
| TTGGATAGAGTTCGGGTTTA+CGG | 0.313821 | 3.1:+32972352 | None:intergenic |
| ATGTTGCTGATTGTGCGTTT+TGG | 0.320723 | 3.1:-32971064 | MS.gene69525:CDS |
| CCATCGCATTGGATAGAGTT+CGG | 0.330714 | 3.1:+32972344 | None:intergenic |
| AAGGACTTCTTCTTATCAAC+AGG | 0.338458 | 3.1:-32961612 | MS.gene69525:CDS |
| GAATTATTGGTTCGTCATAA+AGG | 0.341901 | 3.1:+32969891 | None:intergenic |
| GATATTGTCCAATGCTAGTA+TGG | 0.344621 | 3.1:-32969843 | MS.gene69525:CDS |
| TCCTAAGGGCAGCCAGTTAT+GGG | 0.348083 | 3.1:-32968566 | MS.gene69525:CDS |
| TTCCACCTGTTTAGATGAAC+GGG | 0.348566 | 3.1:+32965663 | None:intergenic |
| TTGATTCATTCCGAGATATT+CGG | 0.351522 | 3.1:+32968122 | None:intergenic |
| AGCAGCATCCGCAGCTTCCT+TGG | 0.359277 | 3.1:+32958074 | None:intergenic |
| CATCGCATTGGATAGAGTTC+GGG | 0.360048 | 3.1:+32972345 | None:intergenic |
| ACAAAAGGCCTGCCCATAAC+TGG | 0.360955 | 3.1:+32968554 | None:intergenic |
| TCTCGAGGGTCTGCAAGTTT+GGG | 0.366487 | 3.1:+32958885 | None:intergenic |
| GAAGAGATGGTATTGGCTTA+AGG | 0.372569 | 3.1:-32960219 | MS.gene69525:CDS |
| TTCCTCCAGAGCAGCTTGCT+TGG | 0.373313 | 3.1:-32969991 | MS.gene69525:CDS |
| GCCGTGAAGCTGGACGATTT+TGG | 0.377662 | 3.1:+32972245 | None:intergenic |
| TGTGGAGCCGCCACGGTGTA+TGG | 0.381850 | 3.1:-32970946 | MS.gene69525:CDS |
| TTCTTCTTTGGAAAGAATCA+TGG | 0.384884 | 3.1:-32961155 | MS.gene69525:CDS |
| GAGCCGCAGTATACGGTGTC+TGG | 0.388055 | 3.1:-32970915 | MS.gene69525:CDS |
| GATGTTGGTGAGCATTTATC+AGG | 0.390074 | 3.1:+32968163 | None:intergenic |
| TGCTAATTGTCTGGCCTGTA+TGG | 0.391082 | 3.1:+32963720 | None:intergenic |
| CCACACCAAGCAAGCTGCTC+TGG | 0.392027 | 3.1:+32969986 | None:intergenic |
| ATCTCCTGGCCGACACCGTC+TGG | 0.392057 | 3.1:-32972179 | MS.gene69525:CDS |
| TCTAGAGATTCTGCTTGATA+AGG | 0.399103 | 3.1:-32965863 | MS.gene69525:intron |
| TCAGCCAACTTCACCGCGTT+AGG | 0.401454 | 3.1:+32970978 | None:intergenic |
| AAAATCGCCGCCGCTCCTTT+CGG | 0.407311 | 3.1:-32972297 | MS.gene69525:CDS |
| TCCAAAATCGTCCAGCTTCA+CGG | 0.408922 | 3.1:-32972246 | MS.gene69525:CDS |
| TGCTAAGATAACTGCGTCAT+TGG | 0.410927 | 3.1:-32965905 | MS.gene69525:CDS |
| TAGGTAACCGGTTCTCCATC+AGG | 0.411163 | 3.1:+32969914 | None:intergenic |
| TGATTCAAAGGTATGTTCCT+TGG | 0.412852 | 3.1:+32961038 | None:intergenic |
| GAGCAGACTCGCCGTGAAGC+TGG | 0.414617 | 3.1:+32972235 | None:intergenic |
| CTCCTCCTCCGGTCATCTCC+TGG | 0.419707 | 3.1:-32972193 | MS.gene69525:CDS |
| CGAACCCCGTTCATCTAAAC+AGG | 0.421606 | 3.1:-32965668 | MS.gene69525:intron |
| ACAGTTTCAATCTTCACAAT+TGG | 0.427477 | 3.1:-32969794 | MS.gene69525:CDS |
| TCAATGCATGCCTCGACAAA+TGG | 0.430793 | 3.1:+32958942 | None:intergenic |
| AACCCCGGCGGTAGGTTAAT+CGG | 0.435433 | 3.1:-32972153 | MS.gene69525:CDS |
| CTTACACCATCTGTCCTGAT+TGG | 0.435960 | 3.1:-32968189 | MS.gene69525:CDS |
| CTCTGGCCACAATCAAGGAC+TGG | 0.436871 | 3.1:-32960190 | MS.gene69525:CDS |
| CAGAAATTCCATACTAGCAT+TGG | 0.439342 | 3.1:+32969835 | None:intergenic |
| CAAGCAAGGCAGCTAACTTT+CGG | 0.439766 | 3.1:+32965698 | None:intergenic |
| TTACTTGGTGTGGGAGATGG+TGG | 0.441418 | 3.1:-32970879 | MS.gene69525:CDS |
| CTTGCGTCGTTTACTCATGA+TGG | 0.441964 | 3.1:-32970741 | MS.gene69525:CDS |
| GGGAGATGGTGGTGAGGAGG+AGG | 0.444591 | 3.1:-32970868 | MS.gene69525:CDS |
| TGGTGGTGAGGAGGAGGATG+CGG | 0.446772 | 3.1:-32970862 | MS.gene69525:CDS |
| CATTTATCAGGCGACCAATC+AGG | 0.447792 | 3.1:+32968175 | None:intergenic |
| TAGTATGGAATTTCTGCAAC+GGG | 0.449925 | 3.1:-32969828 | MS.gene69525:CDS |
| ATGCATTGAAGCAGATGAAA+AGG | 0.452861 | 3.1:-32958928 | MS.gene69525:CDS |
| TTATTACCTAACGATAGATT+CGG | 0.453741 | 3.1:+32972042 | None:intergenic |
| GGACAGTCGTATGCTCGAAT+TGG | 0.456669 | 3.1:-32958102 | MS.gene69525:intron |
| GGAGTTCTTTGGAACCATAC+AGG | 0.459956 | 3.1:-32963734 | MS.gene69525:CDS |
| TGGTGTCACGGGATGGGAAG+TGG | 0.460977 | 3.1:-32970764 | MS.gene69525:CDS |
| ATTGAACCGAATCTATCGTT+AGG | 0.467559 | 3.1:-32972048 | MS.gene69525:intron |
| GCCCATAACTGGCTGCCCTT+AGG | 0.467629 | 3.1:+32968565 | None:intergenic |
| AATCCGGACTTGTATTGTCC+TGG | 0.468046 | 3.1:-32960482 | MS.gene69525:CDS |
| CAGCCAACTTCACCGCGTTA+GGG | 0.469202 | 3.1:+32970979 | None:intergenic |
| CTCAGCTGCCTTTGATTCAA+AGG | 0.470260 | 3.1:+32961026 | None:intergenic |
| GGTTATTGAGCCGCAGTATA+CGG | 0.474902 | 3.1:-32970922 | MS.gene69525:CDS |
| TAAGTCCCGTGCTAATTGTC+TGG | 0.474919 | 3.1:+32963711 | None:intergenic |
| GTTACTACGTCGGATTTGAC+TGG | 0.477285 | 3.1:-32970708 | MS.gene69525:CDS |
| TTCTAAAACTTACCTATTGG+AGG | 0.477730 | 3.1:+32960134 | None:intergenic |
| GACGGTGTGCAGAGGCTTGG+TGG | 0.478653 | 3.1:-32970819 | MS.gene69525:CDS |
| AAACCCTAACGCGGTGAAGT+TGG | 0.478744 | 3.1:-32970982 | MS.gene69525:CDS |
| CGCGCCAACGAACTCTCCTA+AGG | 0.480577 | 3.1:-32968581 | MS.gene69525:CDS |
| TTCACGGCGAGTCTGCTCTT+CGG | 0.483301 | 3.1:-32972230 | MS.gene69525:CDS |
| GCGGTGAAGTTGGCTGATCC+GGG | 0.483726 | 3.1:-32970972 | MS.gene69525:CDS |
| AAATCAAGCTTACCTACAAA+AGG | 0.483898 | 3.1:+32968539 | None:intergenic |
| GGATGCTGTTCTGCTTTACT+GGG | 0.487993 | 3.1:-32969960 | MS.gene69525:CDS |
| CAAGTATAAGTGACACAATC+CGG | 0.488003 | 3.1:-32960498 | MS.gene69525:CDS |
| TGGTCACTTCAAGTTCATGC+TGG | 0.488318 | 3.1:+32960545 | None:intergenic |
| AAGGAGAAGAAACCTCCAAT+AGG | 0.489908 | 3.1:-32960146 | MS.gene69525:intron |
| TCCGCCAGACGGTGTCGGCC+AGG | 0.490057 | 3.1:+32972175 | None:intergenic |
| AAGAGGACCGTTGCAGAAGA+TGG | 0.490500 | 3.1:-32970787 | MS.gene69525:CDS |
| GATGGGCCCTGATGGAGAAC+CGG | 0.492155 | 3.1:-32969921 | MS.gene69525:CDS |
| ACGCAGCTCGATGATTTCCC+AGG | 0.493746 | 3.1:+32960464 | None:intergenic |
| CCAGAGCAGCTTGCTTGGTG+TGG | 0.497588 | 3.1:-32969986 | MS.gene69525:CDS |
| TTCCCAGGACAATACAAGTC+CGG | 0.498893 | 3.1:+32960479 | None:intergenic |
| CTCGTCTGCGTTGTTCAAGA+TGG | 0.501709 | 3.1:-32972105 | MS.gene69525:CDS |
| AGCAAGGGATCTCCACTTCA+TGG | 0.501761 | 3.1:-32961108 | MS.gene69525:CDS |
| TGTGGGAGATGGTGGTGAGG+AGG | 0.503509 | 3.1:-32970871 | MS.gene69525:CDS |
| CTTCGATTATTCTCCTCCTC+CGG | 0.504997 | 3.1:-32972204 | MS.gene69525:CDS |
| TGGAGATCCCTTGCTTGCCA+TGG | 0.506046 | 3.1:+32961116 | None:intergenic |
| AAGATTGAAACTGTGGAGTC+AGG | 0.507333 | 3.1:+32969803 | None:intergenic |
| TGCGGCGGTGATTGCAGTTG+AGG | 0.511307 | 3.1:-32970844 | MS.gene69525:CDS |
| GGAGATCCCTTGCTTGCCAT+GGG | 0.511908 | 3.1:+32961117 | None:intergenic |
| TCGTCATAAAGGTAGGTAAC+CGG | 0.512033 | 3.1:+32969902 | None:intergenic |
| TCTTCTTTGGAAAGAATCAT+GGG | 0.514000 | 3.1:-32961154 | MS.gene69525:CDS |
| GGAACATACCTTTGAATCAA+AGG | 0.514086 | 3.1:-32961034 | MS.gene69525:CDS |
| AGAAGATACAGCCTTGATGA+AGG | 0.515874 | 3.1:-32965471 | MS.gene69525:CDS |
| AAGGGCAGCCAGTTATGGGC+AGG | 0.516825 | 3.1:-32968562 | MS.gene69525:CDS |
| GAGGACGGTGTGCAGAGGCT+TGG | 0.516868 | 3.1:-32970822 | MS.gene69525:CDS |
| ATGAGCAGCAACTGCTGCAT+AGG | 0.517654 | 3.1:+32965738 | None:intergenic |
| AAATGGCGTCGTTTGTATAA+CGG | 0.519833 | 3.1:-32971039 | MS.gene69525:CDS |
| TGCAGAAGATGGTGGTGTCA+CGG | 0.520389 | 3.1:-32970776 | MS.gene69525:CDS |
| GGAAACACGTCGACCTCGCT+CGG | 0.524035 | 3.1:-32972323 | MS.gene69525:CDS |
| TTATATTGCTGAATACTAAG+AGG | 0.525483 | 3.1:+32968294 | None:intergenic |
| TCGAATAAAACTTATTGAGA+AGG | 0.527366 | 3.1:-32961082 | MS.gene69525:CDS |
| CTGCCCTTAGGAGAGTTCGT+TGG | 0.528383 | 3.1:+32968577 | None:intergenic |
| GTTGGCTGATCCGGGGATTG+TGG | 0.529245 | 3.1:-32970964 | MS.gene69525:CDS |
| GGCCAGGAGATGACCGGAGG+AGG | 0.531377 | 3.1:+32972191 | None:intergenic |
| CACCAAGCAAGCTGCTCTGG+AGG | 0.533015 | 3.1:+32969989 | None:intergenic |
| AGATGGTGGTGTCACGGGAT+GGG | 0.533613 | 3.1:-32970770 | MS.gene69525:CDS |
| GTCGTATGCTCGAATTGGTA+TGG | 0.537967 | 3.1:-32958097 | MS.gene69525:CDS |
| GGCAGCCCAGTCCTTGATTG+TGG | 0.538088 | 3.1:+32960184 | None:intergenic |
| ATTCCGATTAACCTACCGCC+GGG | 0.539342 | 3.1:+32972150 | None:intergenic |
| GGGGTTCCGCCAGACGGTGT+CGG | 0.539733 | 3.1:+32972170 | None:intergenic |
| ACACATGCTTCAACAGCCTC+AGG | 0.541349 | 3.1:+32968633 | None:intergenic |
| AGCCGCAGTATACGGTGTCT+GGG | 0.544978 | 3.1:-32970914 | MS.gene69525:CDS |
| CTGCGTTGTTCAAGATGGAA+CGG | 0.545056 | 3.1:-32972100 | MS.gene69525:CDS |
| TTTGGAATCGTCGCGGATCA+CGG | 0.546524 | 3.1:+32972263 | None:intergenic |
| CGGGGATTGTGGAGCCGCCA+CGG | 0.546561 | 3.1:-32970953 | MS.gene69525:CDS |
| ATTCCACCTGTTTAGATGAA+CGG | 0.548796 | 3.1:+32965662 | None:intergenic |
| ATCTCTAGAAGAGTAGCATC+GGG | 0.550017 | 3.1:+32965877 | None:intergenic |
| AAGATGGTGGTGTCACGGGA+TGG | 0.552664 | 3.1:-32970771 | MS.gene69525:CDS |
| GCAGAAGATGGTGGTGTCAC+GGG | 0.552876 | 3.1:-32970775 | MS.gene69525:CDS |
| TCAAAAGACGGTGAGTTGCT+TGG | 0.554692 | 3.1:-32958045 | MS.gene69525:CDS |
| TGGTGTGGGAGATGGTGGTG+AGG | 0.554808 | 3.1:-32970874 | MS.gene69525:CDS |
| ATCCGGACTTGTATTGTCCT+GGG | 0.555622 | 3.1:-32960481 | MS.gene69525:CDS |
| TTTATTCGAGGACCATGAAG+TGG | 0.556071 | 3.1:+32961096 | None:intergenic |
| TGTCGGAGAAGAGATGGTAT+TGG | 0.556366 | 3.1:-32960226 | MS.gene69525:CDS |
| TCGACGTGTTTCCATCGCAT+TGG | 0.557598 | 3.1:+32972333 | None:intergenic |
| TCCTGGCCGACACCGTCTGG+CGG | 0.558100 | 3.1:-32972176 | MS.gene69525:CDS |
| AAGACGGTGAGTTGCTTGGT+CGG | 0.558308 | 3.1:-32958041 | MS.gene69525:CDS |
| ATTCTTATTCCTGAGTGCGA+TGG | 0.559064 | 3.1:-32969872 | MS.gene69525:CDS |
| TATTGGTTCGTCATAAAGGT+AGG | 0.559582 | 3.1:+32969895 | None:intergenic |
| GTTCCTCTCCTGTTAAGCAT+AGG | 0.561921 | 3.1:-32965497 | MS.gene69525:CDS |
| TCTGGCCACAATCAAGGACT+GGG | 0.562575 | 3.1:-32960189 | MS.gene69525:CDS |
| CTTGGTGGTGAGATGCTAAG+AGG | 0.563154 | 3.1:-32970804 | MS.gene69525:CDS |
| AGAAATGTGTAAAATTCTGC+GGG | 0.563554 | 3.1:-32968352 | MS.gene69525:CDS |
| TGCATTGAAGCAGATGAAAA+GGG | 0.563780 | 3.1:-32958927 | MS.gene69525:CDS |
| AATCTCTAGAAGAGTAGCAT+CGG | 0.563932 | 3.1:+32965876 | None:intergenic |
| AGGAGGTGGTGATAATGCAC+TGG | 0.564792 | 3.1:-32965933 | MS.gene69525:CDS |
| TGCTCGAATTGGTATGGCCA+AGG | 0.566532 | 3.1:-32958091 | MS.gene69525:CDS |
| AAGAAATGTGTAAAATTCTG+CGG | 0.567717 | 3.1:-32968353 | MS.gene69525:CDS |
| TCGTCGCGGATCACGGCGAG+TGG | 0.568578 | 3.1:+32972270 | None:intergenic |
| GCAGCTTGCTTGGTGTGGAA+TGG | 0.569731 | 3.1:-32969981 | MS.gene69525:CDS |
| TCCGCGATGCAAGCAGATGT+TGG | 0.571309 | 3.1:+32968148 | None:intergenic |
| GACACCGTCTGGCGGAACCC+CGG | 0.572063 | 3.1:-32972168 | MS.gene69525:CDS |
| ATCCTCACTCCATCGCACTC+AGG | 0.575710 | 3.1:+32969863 | None:intergenic |
| ATCGCCGCCGCTCCTTTCGG+TGG | 0.576413 | 3.1:-32972294 | MS.gene69525:CDS |
| ACATTCAGTCGCCTTCATCA+AGG | 0.578060 | 3.1:+32965460 | None:intergenic |
| GGTGTCGGCCAGGAGATGAC+CGG | 0.578122 | 3.1:+32972185 | None:intergenic |
| CCGAACTCTATCCAATGCGA+TGG | 0.579890 | 3.1:-32972344 | MS.gene69525:CDS |
| GCGTCATACAGCAAAGCTGC+GGG | 0.580917 | 3.1:+32969761 | None:intergenic |
| ACTTGAAGTGACCACAAAGC+AGG | 0.580954 | 3.1:-32960536 | MS.gene69525:CDS |
| CTTTGAATCAAAGGCAGCTG+AGG | 0.582645 | 3.1:-32961025 | MS.gene69525:CDS |
| GATGATGCAGAGGCAACCGT+TGG | 0.584115 | 3.1:-32963755 | MS.gene69525:intron |
| CTAGTATGGAATTTCTGCAA+CGG | 0.584740 | 3.1:-32969829 | MS.gene69525:CDS |
| TACAGGTGTCGGAGAAGAGA+TGG | 0.586198 | 3.1:-32960232 | MS.gene69525:intron |
| TACGGTAGTAACGGTTGTAG+AGG | 0.586205 | 3.1:+32972370 | None:intergenic |
| AGGTTATAGGCCATTTGTCG+AGG | 0.587978 | 3.1:-32958952 | MS.gene69525:CDS |
| CGTGGCGGCTCCACAATCCC+CGG | 0.588150 | 3.1:+32970954 | None:intergenic |
| TACGGTGTCTGGGAATGTTG+AGG | 0.590077 | 3.1:-32970904 | MS.gene69525:CDS |
| GTGATTGCAGTTGAGGAGGA+CGG | 0.591821 | 3.1:-32970837 | MS.gene69525:CDS |
| CGTCGTTTACTCATGATGGC+CGG | 0.595011 | 3.1:-32970737 | MS.gene69525:CDS |
| TTCCTGAGTGCGATGGAGTG+AGG | 0.596415 | 3.1:-32969865 | MS.gene69525:CDS |
| GTTCGGGTTTACGGTAGTAA+CGG | 0.598178 | 3.1:+32972361 | None:intergenic |
| ATGCTTCAACAGCCTCAGGA+AGG | 0.598204 | 3.1:+32968637 | None:intergenic |
| TACAGGCCAGACAATTAGCA+CGG | 0.598484 | 3.1:-32963717 | MS.gene69525:CDS |
| TGGTGAGGAGGAGGATGCGG+CGG | 0.599087 | 3.1:-32970859 | MS.gene69525:CDS |
| ACCGCCGGGGTTCCGCCAGA+CGG | 0.600762 | 3.1:+32972164 | None:intergenic |
| TCTGGCGGAACCCCGGCGGT+AGG | 0.600872 | 3.1:-32972161 | MS.gene69525:CDS |
| GCAGTGCGCAGCTTTGAGAT+CGG | 0.602610 | 3.1:-32968321 | MS.gene69525:CDS |
| CATTCCGATTAACCTACCGC+CGG | 0.602682 | 3.1:+32972149 | None:intergenic |
| GACACCACCATCTTCTGCAA+CGG | 0.602911 | 3.1:+32970780 | None:intergenic |
| AGGCGACCAATCAGGACAGA+TGG | 0.604026 | 3.1:+32968183 | None:intergenic |
| ACTTATTTATAACTTATGCA+CGG | 0.605925 | 3.1:-32963693 | MS.gene69525:intron |
| GAAGCATGTGTTGATGCTGC+AGG | 0.606318 | 3.1:-32968621 | MS.gene69525:CDS |
| CCGGCTTCTTGTTACTACGT+CGG | 0.606461 | 3.1:-32970718 | MS.gene69525:CDS |
| AGGTAACCGGTTCTCCATCA+GGG | 0.607086 | 3.1:+32969915 | None:intergenic |
| GGCGGTGATTGCAGTTGAGG+AGG | 0.608076 | 3.1:-32970841 | MS.gene69525:CDS |
| GACTGGTGTTATCATCGAGA+GGG | 0.609135 | 3.1:-32970691 | MS.gene69525:CDS |
| GTAGGTTAATCGGAATGTCG+TGG | 0.613022 | 3.1:-32972143 | MS.gene69525:CDS |
| TGCTTCAACAGCCTCAGGAA+GGG | 0.613074 | 3.1:+32968638 | None:intergenic |
| TTGAGGAGGACGGTGTGCAG+AGG | 0.614752 | 3.1:-32970827 | MS.gene69525:CDS |
| GGCAAACGTCTCAGTAGCAG+CGG | 0.614786 | 3.1:-32972403 | MS.gene69525:CDS |
| CCGACGTAGTAACAAGAAGC+CGG | 0.616053 | 3.1:+32970718 | None:intergenic |
| TCTCCTATGCTTAACAGGAG+AGG | 0.616681 | 3.1:+32965494 | None:intergenic |
| TCGCGGATATCCGAATATCT+CGG | 0.618444 | 3.1:-32968132 | MS.gene69525:CDS |
| GAGTGGACCACCGAAAGGAG+CGG | 0.618491 | 3.1:+32972287 | None:intergenic |
| CGCGTCATACAGCAAAGCTG+CGG | 0.620218 | 3.1:+32969760 | None:intergenic |
| GCGCCAACGAACTCTCCTAA+GGG | 0.630802 | 3.1:-32968580 | MS.gene69525:CDS |
| TGGACCACCGAAAGGAGCGG+CGG | 0.633119 | 3.1:+32972290 | None:intergenic |
| TTGATGAAGGCGACTGAATG+TGG | 0.633961 | 3.1:-32965458 | MS.gene69525:CDS |
| ACGGCGAGTGGACCACCGAA+AGG | 0.636490 | 3.1:+32972282 | None:intergenic |
| TGACTGGTGTTATCATCGAG+AGG | 0.637654 | 3.1:-32970692 | MS.gene69525:CDS |
| CGGTGAAGTTGGCTGATCCG+GGG | 0.639768 | 3.1:-32970971 | MS.gene69525:CDS |
| TGGTATGGCCAAGGAAGCTG+CGG | 0.640973 | 3.1:-32958082 | MS.gene69525:CDS |
| AGGACTTCTTCTTATCAACA+GGG | 0.646073 | 3.1:-32961611 | MS.gene69525:CDS |
| TCTCAGTTAAAAGTGTGCAA+AGG | 0.649118 | 3.1:-32965766 | MS.gene69525:intron |
| ACAGGCCAGACAATTAGCAC+GGG | 0.649292 | 3.1:-32963716 | MS.gene69525:CDS |
| GATAAGATCGTCCCTTCCTG+AGG | 0.650860 | 3.1:-32968649 | MS.gene69525:CDS |
| GCAAGGCAGCTAACTTTCGG+CGG | 0.651634 | 3.1:+32965701 | None:intergenic |
| GGGTTCGTGTTCAACAAGCA+AGG | 0.653717 | 3.1:+32965684 | None:intergenic |
| ATGGTTCCAAAGAACTCCAA+CGG | 0.655891 | 3.1:+32963739 | None:intergenic |
| GGAGCCGCCACGGTGTATGG+CGG | 0.656611 | 3.1:-32970943 | MS.gene69525:CDS |
| GCTGCTGCACAGTCAAAAGA+CGG | 0.657054 | 3.1:-32958057 | MS.gene69525:CDS |
| GTCGGCCAGGAGATGACCGG+AGG | 0.663556 | 3.1:+32972188 | None:intergenic |
| TATCATCGAGAGGGAGTGCG+AGG | 0.667435 | 3.1:-32970682 | MS.gene69525:intron |
| AATTGTGAAGATTGAAACTG+TGG | 0.675128 | 3.1:+32969796 | None:intergenic |
| AGGACCGTTGCAGAAGATGG+TGG | 0.678490 | 3.1:-32970784 | MS.gene69525:CDS |
| ACGTCTCAGTAGCAGCGGAG+TGG | 0.683175 | 3.1:-32972398 | MS.gene69525:CDS |
| ACCAACATCTGCTTGCATCG+CGG | 0.685084 | 3.1:-32968149 | MS.gene69525:CDS |
| TTCCCAGACACCGTATACTG+CGG | 0.689357 | 3.1:+32970912 | None:intergenic |
| ACCGTCTGGCGGAACCCCGG+CGG | 0.690268 | 3.1:-32972165 | MS.gene69525:CDS |
| GGAGGTGGTGATAATGCACT+GGG | 0.702431 | 3.1:-32965932 | MS.gene69525:CDS |
| GCAGACGAGAGTATGATCAT+CGG | 0.705692 | 3.1:+32972119 | None:intergenic |
| TCCACCTGTTTAGATGAACG+GGG | 0.712415 | 3.1:+32965664 | None:intergenic |
| TTCCGATTAACCTACCGCCG+GGG | 0.712943 | 3.1:+32972151 | None:intergenic |
| TCAATAACCGCCATACACCG+TGG | 0.722018 | 3.1:+32970936 | None:intergenic |
| ATAACCGCCATACACCGTGG+CGG | 0.766199 | 3.1:+32970939 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 32957954 | 32972427 | 32957954 | ID=MS.gene69525 |
| chr3.1 | mRNA | 32957954 | 32972427 | 32957954 | ID=MS.gene69525.t1;Parent=MS.gene69525 |
| chr3.1 | exon | 32972049 | 32972427 | 32972049 | ID=MS.gene69525.t1.exon1;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32972049 | 32972427 | 32972049 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32970683 | 32971107 | 32970683 | ID=MS.gene69525.t1.exon2;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32970683 | 32971107 | 32970683 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32969730 | 32970020 | 32969730 | ID=MS.gene69525.t1.exon3;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32969730 | 32970020 | 32969730 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32968552 | 32968691 | 32968552 | ID=MS.gene69525.t1.exon4;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32968552 | 32968691 | 32968552 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32968293 | 32968398 | 32968293 | ID=MS.gene69525.t1.exon5;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32968293 | 32968398 | 32968293 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32968122 | 32968214 | 32968122 | ID=MS.gene69525.t1.exon6;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32968122 | 32968214 | 32968122 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32965864 | 32965953 | 32965864 | ID=MS.gene69525.t1.exon7;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32965864 | 32965953 | 32965864 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32965669 | 32965782 | 32965669 | ID=MS.gene69525.t1.exon8;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32965669 | 32965782 | 32965669 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32965412 | 32965519 | 32965412 | ID=MS.gene69525.t1.exon9;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32965412 | 32965519 | 32965412 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32963694 | 32963767 | 32963694 | ID=MS.gene69525.t1.exon10;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32963694 | 32963767 | 32963694 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32961602 | 32961656 | 32961602 | ID=MS.gene69525.t1.exon11;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32961602 | 32961656 | 32961602 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32961006 | 32961187 | 32961006 | ID=MS.gene69525.t1.exon12;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32961006 | 32961187 | 32961006 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32960441 | 32960570 | 32960441 | ID=MS.gene69525.t1.exon13;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32960441 | 32960570 | 32960441 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32960147 | 32960249 | 32960147 | ID=MS.gene69525.t1.exon14;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32960147 | 32960249 | 32960147 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32958875 | 32958972 | 32958875 | ID=MS.gene69525.t1.exon15;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32958875 | 32958972 | 32958875 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| chr3.1 | exon | 32957954 | 32958118 | 32957954 | ID=MS.gene69525.t1.exon16;Parent=MS.gene69525.t1 |
| chr3.1 | CDS | 32957954 | 32958118 | 32957954 | ID=cds.MS.gene69525.t1;Parent=MS.gene69525.t1 |
| Gene Sequence |
| Protein sequence |
