Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69572.t1 | XP_013459546.1 | 93.8 | 371 | 23 | 0 | 1 | 371 | 1 | 371 | 5.40E-205 | 723.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69572.t1 | Q9FJ45 | 45.5 | 376 | 185 | 10 | 1 | 362 | 1 | 370 | 1.9e-81 | 304.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69572.t1 | A0A072UVC7 | 93.8 | 371 | 23 | 0 | 1 | 371 | 1 | 371 | 3.9e-205 | 723.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene69572 | MS.gene002554 | PPI |
MS.gene69572 | MS.gene54327 | PPI |
MS.gene69572 | MS.gene54325 | PPI |
MS.gene004228 | MS.gene69572 | PPI |
MS.gene69572 | MS.gene002555 | PPI |
MS.gene01536 | MS.gene69572 | PPI |
MS.gene69572 | MS.gene004227 | PPI |
MS.gene69572 | MS.gene004229 | PPI |
MS.gene002553 | MS.gene69572 | PPI |
MS.gene69572 | MS.gene54326 | PPI |
MS.gene01537 | MS.gene69572 | PPI |
MS.gene01535 | MS.gene69572 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69572.t1 | MTR_3g448360 | 93.801 | 371 | 23 | 0 | 1 | 371 | 1 | 371 | 0.0 | 725 |
MS.gene69572.t1 | MTR_3g069780 | 80.697 | 373 | 68 | 3 | 1 | 371 | 1 | 371 | 0.0 | 608 |
MS.gene69572.t1 | MTR_3g438030 | 80.161 | 373 | 70 | 3 | 1 | 371 | 1 | 371 | 0.0 | 606 |
MS.gene69572.t1 | MTR_3g069520 | 77.419 | 372 | 80 | 3 | 1 | 371 | 1 | 369 | 0.0 | 582 |
MS.gene69572.t1 | MTR_3g463960 | 66.408 | 387 | 112 | 5 | 1 | 370 | 2 | 387 | 0.0 | 511 |
MS.gene69572.t1 | MTR_3g463950 | 66.408 | 387 | 112 | 5 | 1 | 370 | 2 | 387 | 0.0 | 511 |
MS.gene69572.t1 | MTR_3g463970 | 66.408 | 387 | 112 | 5 | 1 | 370 | 2 | 387 | 0.0 | 511 |
MS.gene69572.t1 | MTR_3g463940 | 66.408 | 387 | 112 | 5 | 1 | 370 | 2 | 387 | 0.0 | 511 |
MS.gene69572.t1 | MTR_2g079090 | 68.901 | 373 | 98 | 7 | 1 | 370 | 1 | 358 | 4.06e-179 | 501 |
MS.gene69572.t1 | MTR_0029s0050 | 68.633 | 373 | 99 | 7 | 1 | 370 | 1 | 358 | 4.64e-177 | 496 |
MS.gene69572.t1 | MTR_2g079080 | 67.828 | 373 | 102 | 7 | 1 | 370 | 1 | 358 | 3.87e-176 | 494 |
MS.gene69572.t1 | MTR_3g463930 | 64.304 | 395 | 114 | 7 | 1 | 370 | 2 | 394 | 3.66e-175 | 493 |
MS.gene69572.t1 | MTR_0029s0100 | 68.097 | 373 | 101 | 7 | 1 | 370 | 1 | 358 | 8.86e-175 | 490 |
MS.gene69572.t1 | MTR_2g043980 | 60.322 | 373 | 128 | 6 | 1 | 371 | 7 | 361 | 8.67e-152 | 432 |
MS.gene69572.t1 | MTR_2g015650 | 51.467 | 375 | 168 | 7 | 5 | 371 | 6 | 374 | 2.53e-124 | 363 |
MS.gene69572.t1 | MTR_2g015670 | 50.275 | 364 | 158 | 8 | 13 | 371 | 15 | 360 | 1.01e-113 | 335 |
MS.gene69572.t1 | MTR_2g015630 | 49.263 | 339 | 157 | 7 | 34 | 363 | 36 | 368 | 6.02e-104 | 311 |
MS.gene69572.t1 | MTR_2g015580 | 45.257 | 369 | 181 | 8 | 10 | 364 | 22 | 383 | 4.46e-102 | 307 |
MS.gene69572.t1 | MTR_2g043990 | 53.061 | 294 | 111 | 5 | 1 | 292 | 69 | 337 | 2.10e-95 | 288 |
MS.gene69572.t1 | MTR_2g015590 | 44.282 | 341 | 180 | 5 | 27 | 361 | 29 | 365 | 8.05e-92 | 280 |
MS.gene69572.t1 | MTR_3g466240 | 59.729 | 221 | 58 | 2 | 102 | 319 | 2 | 194 | 4.27e-82 | 249 |
MS.gene69572.t1 | MTR_2g015590 | 44.689 | 273 | 143 | 4 | 27 | 293 | 29 | 299 | 5.62e-70 | 223 |
MS.gene69572.t1 | MTR_4g104240 | 35.695 | 367 | 209 | 12 | 5 | 361 | 18 | 367 | 1.81e-64 | 210 |
MS.gene69572.t1 | MTR_3g466190 | 60.000 | 175 | 45 | 4 | 56 | 226 | 7 | 160 | 5.47e-59 | 191 |
MS.gene69572.t1 | MTR_3g466190 | 78.205 | 78 | 17 | 0 | 294 | 371 | 152 | 229 | 4.40e-35 | 129 |
MS.gene69572.t1 | MTR_7g087190 | 33.770 | 382 | 198 | 16 | 19 | 370 | 33 | 389 | 1.25e-51 | 177 |
MS.gene69572.t1 | MTR_1g030220 | 35.294 | 357 | 195 | 11 | 27 | 363 | 38 | 378 | 1.11e-48 | 169 |
MS.gene69572.t1 | MTR_8g028160 | 33.867 | 375 | 218 | 13 | 6 | 361 | 11 | 374 | 4.09e-47 | 165 |
MS.gene69572.t1 | MTR_7g111780 | 34.795 | 342 | 197 | 12 | 29 | 363 | 36 | 358 | 1.66e-45 | 160 |
MS.gene69572.t1 | MTR_6g007090 | 31.759 | 381 | 223 | 10 | 1 | 361 | 7 | 370 | 2.44e-45 | 160 |
MS.gene69572.t1 | MTR_1g030268 | 34.831 | 356 | 196 | 13 | 27 | 363 | 38 | 376 | 3.20e-45 | 160 |
MS.gene69572.t1 | MTR_7g116870 | 33.241 | 361 | 204 | 13 | 27 | 369 | 31 | 372 | 4.35e-45 | 159 |
MS.gene69572.t1 | MTR_8g089805 | 32.283 | 381 | 207 | 15 | 15 | 363 | 20 | 381 | 5.70e-45 | 159 |
MS.gene69572.t1 | MTR_1g030340 | 33.247 | 388 | 218 | 14 | 4 | 370 | 18 | 385 | 5.94e-45 | 159 |
MS.gene69572.t1 | MTR_7g033165 | 34.174 | 357 | 198 | 12 | 27 | 362 | 31 | 371 | 2.86e-44 | 157 |
MS.gene69572.t1 | MTR_7g113860 | 31.443 | 388 | 212 | 16 | 3 | 361 | 10 | 372 | 2.06e-42 | 152 |
MS.gene69572.t1 | MTR_1g030275 | 34.746 | 354 | 191 | 13 | 27 | 357 | 37 | 373 | 4.14e-42 | 151 |
MS.gene69572.t1 | MTR_7g113860 | 32.353 | 374 | 204 | 15 | 15 | 361 | 15 | 366 | 1.27e-40 | 147 |
MS.gene69572.t1 | MTR_1g030230 | 32.877 | 365 | 209 | 12 | 19 | 363 | 22 | 370 | 2.02e-40 | 147 |
MS.gene69572.t1 | MTR_6g007095 | 31.026 | 390 | 225 | 11 | 1 | 367 | 7 | 375 | 3.22e-40 | 151 |
MS.gene69572.t1 | MTR_6g007095 | 28.375 | 363 | 211 | 11 | 22 | 363 | 356 | 690 | 5.41e-26 | 110 |
MS.gene69572.t1 | MTR_7g033150 | 32.010 | 403 | 215 | 17 | 1 | 366 | 1 | 381 | 1.11e-39 | 145 |
MS.gene69572.t1 | MTR_7g033155 | 32.115 | 383 | 206 | 13 | 21 | 366 | 30 | 395 | 5.52e-38 | 140 |
MS.gene69572.t1 | MTR_1g082390 | 30.220 | 364 | 224 | 13 | 18 | 364 | 20 | 370 | 9.01e-36 | 134 |
MS.gene69572.t1 | MTR_1g030268 | 35.252 | 278 | 157 | 9 | 27 | 293 | 38 | 303 | 1.85e-35 | 132 |
MS.gene69572.t1 | MTR_8g031420 | 29.380 | 371 | 218 | 13 | 2 | 356 | 5 | 347 | 7.76e-34 | 129 |
MS.gene69572.t1 | MTR_8g031390 | 28.739 | 341 | 211 | 12 | 24 | 356 | 32 | 348 | 5.06e-33 | 127 |
MS.gene69572.t1 | MTR_8g031430 | 29.825 | 342 | 207 | 13 | 24 | 356 | 32 | 349 | 1.36e-32 | 125 |
MS.gene69572.t1 | MTR_8g038680 | 28.460 | 383 | 223 | 13 | 3 | 361 | 9 | 364 | 2.18e-32 | 125 |
MS.gene69572.t1 | MTR_7g033165 | 35.606 | 264 | 151 | 8 | 27 | 279 | 31 | 286 | 2.71e-32 | 123 |
MS.gene69572.t1 | MTR_6g007100 | 30.491 | 387 | 212 | 18 | 1 | 367 | 7 | 356 | 3.30e-32 | 124 |
MS.gene69572.t1 | MTR_7g111780 | 33.955 | 268 | 153 | 10 | 103 | 363 | 9 | 259 | 8.71e-31 | 118 |
MS.gene69572.t1 | MTR_8g031400 | 30.086 | 349 | 197 | 14 | 24 | 356 | 32 | 349 | 9.83e-31 | 120 |
MS.gene69572.t1 | MTR_8g022810 | 29.915 | 351 | 199 | 15 | 28 | 360 | 40 | 361 | 4.67e-30 | 119 |
MS.gene69572.t1 | MTR_8g031390 | 29.153 | 295 | 180 | 11 | 24 | 313 | 32 | 302 | 7.71e-28 | 111 |
MS.gene69572.t1 | MTR_4g056160 | 29.970 | 337 | 206 | 11 | 29 | 354 | 27 | 344 | 9.47e-28 | 112 |
MS.gene69572.t1 | MTR_1g025780 | 28.533 | 368 | 222 | 16 | 1 | 355 | 15 | 354 | 4.65e-27 | 110 |
MS.gene69572.t1 | MTR_4g056280 | 30.226 | 354 | 215 | 12 | 19 | 363 | 21 | 351 | 1.14e-26 | 109 |
MS.gene69572.t1 | MTR_1g025680 | 29.111 | 371 | 216 | 14 | 3 | 355 | 8 | 349 | 5.46e-26 | 108 |
MS.gene69572.t1 | MTR_8g014910 | 28.610 | 367 | 217 | 14 | 3 | 354 | 11 | 347 | 7.91e-26 | 107 |
MS.gene69572.t1 | MTR_2g044100 | 27.614 | 373 | 223 | 14 | 3 | 356 | 17 | 361 | 1.32e-25 | 107 |
MS.gene69572.t1 | MTR_3g052490 | 28.763 | 372 | 218 | 16 | 3 | 358 | 12 | 352 | 2.86e-25 | 105 |
MS.gene69572.t1 | MTR_2g033930 | 27.763 | 371 | 234 | 11 | 1 | 362 | 8 | 353 | 5.02e-25 | 104 |
MS.gene69572.t1 | MTR_2g015080 | 27.248 | 367 | 220 | 17 | 5 | 349 | 15 | 356 | 6.26e-25 | 104 |
MS.gene69572.t1 | MTR_1g030265 | 31.353 | 303 | 170 | 12 | 79 | 357 | 53 | 341 | 8.63e-25 | 103 |
MS.gene69572.t1 | MTR_5g078210 | 27.463 | 335 | 198 | 13 | 33 | 351 | 29 | 334 | 1.52e-24 | 103 |
MS.gene69572.t1 | MTR_8g089805 | 28.289 | 304 | 179 | 12 | 84 | 363 | 25 | 313 | 2.35e-24 | 102 |
MS.gene69572.t1 | MTR_2g100620 | 27.219 | 338 | 212 | 11 | 29 | 354 | 31 | 346 | 2.53e-24 | 102 |
MS.gene69572.t1 | MTR_8g079050 | 28.912 | 377 | 214 | 17 | 3 | 356 | 15 | 360 | 1.36e-23 | 100 |
MS.gene69572.t1 | MTR_5g022630 | 30.211 | 331 | 196 | 12 | 29 | 346 | 43 | 351 | 1.81e-23 | 100 |
MS.gene69572.t1 | MTR_8g012540 | 28.135 | 327 | 207 | 10 | 3 | 320 | 9 | 316 | 3.41e-23 | 99.4 |
MS.gene69572.t1 | MTR_1g025720 | 29.526 | 359 | 208 | 16 | 3 | 347 | 16 | 343 | 7.70e-23 | 98.6 |
MS.gene69572.t1 | MTR_7g113860 | 28.617 | 311 | 176 | 13 | 77 | 361 | 8 | 298 | 9.98e-23 | 97.4 |
MS.gene69572.t1 | MTR_3g098270 | 26.649 | 379 | 229 | 16 | 1 | 357 | 3 | 354 | 1.35e-22 | 98.2 |
MS.gene69572.t1 | MTR_4g035353 | 26.027 | 365 | 235 | 14 | 4 | 357 | 8 | 348 | 1.44e-22 | 97.8 |
MS.gene69572.t1 | MTR_5g009100 | 27.353 | 340 | 214 | 13 | 31 | 359 | 48 | 365 | 3.01e-22 | 97.4 |
MS.gene69572.t1 | MTR_1g025700 | 29.178 | 353 | 209 | 15 | 16 | 355 | 40 | 364 | 4.02e-22 | 96.7 |
MS.gene69572.t1 | MTR_3g052580 | 28.032 | 371 | 220 | 17 | 3 | 358 | 9 | 347 | 1.39e-21 | 95.5 |
MS.gene69572.t1 | MTR_3g435540 | 27.945 | 365 | 207 | 14 | 31 | 367 | 25 | 361 | 1.42e-21 | 95.1 |
MS.gene69572.t1 | MTR_3g052580 | 28.032 | 371 | 220 | 17 | 3 | 358 | 8 | 346 | 1.83e-21 | 95.1 |
MS.gene69572.t1 | MTR_2g033920 | 29.213 | 356 | 200 | 14 | 28 | 362 | 34 | 358 | 1.93e-21 | 94.7 |
MS.gene69572.t1 | MTR_5g078210 | 27.327 | 333 | 185 | 12 | 33 | 351 | 29 | 318 | 2.28e-21 | 94.0 |
MS.gene69572.t1 | MTR_4g108690 | 27.273 | 341 | 205 | 13 | 31 | 355 | 29 | 342 | 2.71e-21 | 94.4 |
MS.gene69572.t1 | MTR_1g025760 | 29.118 | 340 | 204 | 14 | 29 | 355 | 80 | 395 | 7.10e-21 | 93.6 |
MS.gene69572.t1 | MTR_3g052480 | 28.800 | 375 | 215 | 19 | 4 | 358 | 12 | 354 | 8.55e-21 | 92.8 |
MS.gene69572.t1 | MTR_5g084750 | 27.327 | 333 | 195 | 14 | 29 | 343 | 30 | 333 | 1.50e-20 | 92.0 |
MS.gene69572.t1 | MTR_5g074270 | 28.190 | 337 | 209 | 13 | 27 | 351 | 31 | 346 | 1.85e-20 | 92.0 |
MS.gene69572.t1 | MTR_5g084790 | 29.226 | 349 | 192 | 17 | 29 | 355 | 32 | 347 | 2.30e-20 | 91.7 |
MS.gene69572.t1 | MTR_3g464730 | 26.273 | 373 | 227 | 14 | 1 | 355 | 2 | 344 | 3.01e-20 | 91.3 |
MS.gene69572.t1 | MTR_4g087985 | 27.321 | 377 | 223 | 16 | 6 | 356 | 15 | 366 | 3.07e-20 | 91.3 |
MS.gene69572.t1 | MTR_3g082830 | 27.143 | 350 | 206 | 14 | 29 | 359 | 38 | 357 | 3.12e-20 | 91.3 |
MS.gene69572.t1 | MTR_8g022790 | 26.531 | 343 | 213 | 9 | 24 | 356 | 32 | 345 | 3.34e-20 | 91.3 |
MS.gene69572.t1 | MTR_5g022640 | 27.654 | 358 | 225 | 13 | 9 | 355 | 25 | 359 | 3.52e-20 | 91.3 |
MS.gene69572.t1 | MTR_5g084770 | 27.882 | 373 | 215 | 16 | 3 | 354 | 4 | 343 | 5.16e-20 | 90.5 |
MS.gene69572.t1 | MTR_8g075230 | 28.000 | 375 | 218 | 14 | 6 | 355 | 4 | 351 | 1.14e-19 | 89.7 |
MS.gene69572.t1 | MTR_0009s0250 | 26.542 | 373 | 228 | 14 | 4 | 362 | 5 | 345 | 1.84e-19 | 89.0 |
MS.gene69572.t1 | MTR_5g093090 | 27.056 | 377 | 222 | 16 | 4 | 362 | 11 | 352 | 2.05e-19 | 89.0 |
MS.gene69572.t1 | MTR_4g122200 | 28.497 | 386 | 214 | 19 | 1 | 365 | 15 | 359 | 4.80e-19 | 87.8 |
MS.gene69572.t1 | MTR_3g005650 | 27.576 | 330 | 197 | 15 | 29 | 345 | 30 | 330 | 5.82e-19 | 87.4 |
MS.gene69572.t1 | MTR_3g114090 | 29.023 | 348 | 198 | 18 | 27 | 355 | 34 | 351 | 8.95e-19 | 87.0 |
MS.gene69572.t1 | MTR_7g116520 | 27.042 | 355 | 196 | 18 | 28 | 356 | 33 | 350 | 1.40e-18 | 86.7 |
MS.gene69572.t1 | MTR_5g083040 | 27.596 | 337 | 215 | 13 | 29 | 353 | 32 | 351 | 2.15e-18 | 85.9 |
MS.gene69572.t1 | MTR_8g075200 | 26.371 | 383 | 226 | 15 | 1 | 355 | 2 | 356 | 1.23e-17 | 84.0 |
MS.gene69572.t1 | MTR_1g024890 | 26.178 | 382 | 212 | 18 | 8 | 356 | 4 | 348 | 1.38e-17 | 83.6 |
MS.gene69572.t1 | MTR_1g092750 | 25.382 | 327 | 208 | 10 | 30 | 349 | 41 | 338 | 1.66e-17 | 83.2 |
MS.gene69572.t1 | MTR_1g060490 | 24.260 | 338 | 213 | 11 | 26 | 353 | 34 | 338 | 8.89e-17 | 80.9 |
MS.gene69572.t1 | MTR_2g084585 | 26.190 | 336 | 217 | 11 | 29 | 354 | 30 | 344 | 1.27e-16 | 80.5 |
MS.gene69572.t1 | MTR_3g114120 | 27.353 | 340 | 199 | 14 | 29 | 350 | 47 | 356 | 1.71e-16 | 80.5 |
MS.gene69572.t1 | MTR_8g022810 | 32.843 | 204 | 115 | 9 | 28 | 221 | 40 | 231 | 1.94e-16 | 79.7 |
MS.gene69572.t1 | MTR_1g060500 | 25.073 | 343 | 212 | 14 | 26 | 353 | 37 | 349 | 2.01e-16 | 80.1 |
MS.gene69572.t1 | MTR_8g075220 | 24.479 | 384 | 237 | 13 | 1 | 355 | 1 | 360 | 2.55e-16 | 79.7 |
MS.gene69572.t1 | MTR_3g021460 | 24.484 | 339 | 217 | 9 | 29 | 359 | 31 | 338 | 5.25e-16 | 79.0 |
MS.gene69572.t1 | MTR_1g069175 | 25.464 | 377 | 222 | 15 | 9 | 358 | 9 | 353 | 5.20e-15 | 75.9 |
MS.gene69572.t1 | MTR_1g092740 | 24.776 | 335 | 211 | 12 | 30 | 353 | 39 | 343 | 1.69e-14 | 74.3 |
MS.gene69572.t1 | MTR_2g033920 | 28.470 | 281 | 167 | 11 | 28 | 293 | 34 | 295 | 3.43e-14 | 73.2 |
MS.gene69572.t1 | MTR_2g461580 | 23.181 | 371 | 240 | 11 | 1 | 359 | 1 | 338 | 1.06e-13 | 72.0 |
MS.gene69572.t1 | MTR_5g093090 | 26.452 | 310 | 182 | 13 | 4 | 295 | 11 | 292 | 5.23e-13 | 69.3 |
MS.gene69572.t1 | MTR_3g023220 | 24.316 | 329 | 199 | 11 | 30 | 345 | 34 | 325 | 6.41e-13 | 69.7 |
MS.gene69572.t1 | MTR_2g017965 | 25.298 | 336 | 204 | 14 | 30 | 350 | 34 | 337 | 4.45e-12 | 67.0 |
MS.gene69572.t1 | MTR_1g060520 | 24.118 | 340 | 183 | 14 | 26 | 353 | 37 | 313 | 8.80e-12 | 65.9 |
MS.gene69572.t1 | MTR_5g087690 | 23.615 | 343 | 207 | 11 | 29 | 352 | 50 | 356 | 1.60e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69572.t1 | AT5G45910 | 45.623 | 377 | 183 | 11 | 1 | 362 | 1 | 370 | 7.09e-101 | 303 |
MS.gene69572.t1 | AT1G28600 | 43.056 | 360 | 189 | 10 | 11 | 361 | 12 | 364 | 7.15e-87 | 268 |
MS.gene69572.t1 | AT1G28610 | 41.689 | 367 | 198 | 9 | 6 | 363 | 7 | 366 | 3.59e-86 | 266 |
MS.gene69572.t1 | AT1G31550 | 42.318 | 371 | 193 | 11 | 1 | 361 | 10 | 369 | 4.42e-86 | 266 |
MS.gene69572.t1 | AT1G28590 | 42.197 | 346 | 186 | 7 | 27 | 364 | 34 | 373 | 7.39e-86 | 266 |
MS.gene69572.t1 | AT1G28570 | 41.240 | 371 | 200 | 9 | 1 | 361 | 6 | 368 | 9.53e-85 | 263 |
MS.gene69572.t1 | AT1G28580 | 40.270 | 370 | 204 | 9 | 1 | 361 | 10 | 371 | 8.68e-84 | 260 |
MS.gene69572.t1 | AT2G27360 | 42.319 | 345 | 182 | 9 | 27 | 361 | 31 | 368 | 7.75e-83 | 258 |
MS.gene69572.t1 | AT1G31550 | 41.779 | 371 | 192 | 12 | 1 | 361 | 10 | 366 | 3.78e-82 | 256 |
MS.gene69572.t1 | AT1G28640 | 40.751 | 346 | 189 | 8 | 27 | 363 | 33 | 371 | 1.69e-80 | 251 |
MS.gene69572.t1 | AT1G28670 | 41.429 | 350 | 182 | 10 | 27 | 363 | 33 | 372 | 1.86e-79 | 249 |
MS.gene69572.t1 | AT1G28660 | 39.678 | 373 | 199 | 11 | 3 | 363 | 13 | 371 | 1.53e-78 | 246 |
MS.gene69572.t1 | AT1G28660 | 39.678 | 373 | 198 | 12 | 3 | 363 | 13 | 370 | 1.52e-77 | 244 |
MS.gene69572.t1 | AT1G28650 | 40.974 | 349 | 184 | 9 | 27 | 363 | 35 | 373 | 2.80e-77 | 243 |
MS.gene69572.t1 | AT1G28580 | 39.726 | 292 | 166 | 6 | 74 | 361 | 5 | 290 | 2.66e-66 | 213 |
MS.gene69572.t1 | AT3G48460 | 38.000 | 350 | 187 | 11 | 26 | 361 | 35 | 368 | 9.42e-63 | 206 |
MS.gene69572.t1 | AT5G03980 | 35.838 | 346 | 165 | 10 | 15 | 353 | 15 | 310 | 2.10e-54 | 182 |
MS.gene69572.t1 | AT5G14450 | 32.987 | 385 | 214 | 13 | 3 | 367 | 21 | 381 | 2.11e-46 | 163 |
MS.gene69572.t1 | AT1G28570 | 40.187 | 214 | 117 | 5 | 154 | 361 | 88 | 296 | 3.51e-46 | 160 |
MS.gene69572.t1 | AT1G28570 | 40.476 | 210 | 114 | 5 | 158 | 361 | 1 | 205 | 8.33e-46 | 157 |
MS.gene69572.t1 | AT1G56670 | 32.398 | 392 | 216 | 15 | 1 | 368 | 1 | 367 | 8.56e-45 | 158 |
MS.gene69572.t1 | AT4G01130 | 32.773 | 357 | 202 | 12 | 27 | 361 | 32 | 372 | 9.07e-44 | 155 |
MS.gene69572.t1 | AT1G67830 | 33.702 | 362 | 195 | 15 | 20 | 353 | 21 | 365 | 3.13e-43 | 154 |
MS.gene69572.t1 | AT1G54790 | 32.632 | 380 | 213 | 16 | 3 | 361 | 12 | 369 | 7.79e-43 | 153 |
MS.gene69572.t1 | AT3G62280 | 31.638 | 354 | 203 | 12 | 20 | 361 | 31 | 357 | 3.43e-40 | 146 |
MS.gene69572.t1 | AT1G09390 | 32.295 | 353 | 201 | 14 | 29 | 368 | 37 | 364 | 3.26e-39 | 143 |
MS.gene69572.t1 | AT3G26430 | 31.373 | 357 | 212 | 12 | 27 | 363 | 29 | 372 | 6.61e-39 | 143 |
MS.gene69572.t1 | AT1G54790 | 31.538 | 390 | 211 | 17 | 1 | 361 | 6 | 368 | 1.42e-38 | 142 |
MS.gene69572.t1 | AT1G28600 | 42.289 | 201 | 105 | 7 | 11 | 204 | 12 | 208 | 1.93e-38 | 137 |
MS.gene69572.t1 | AT3G05180 | 31.034 | 348 | 209 | 12 | 27 | 356 | 34 | 368 | 3.90e-37 | 138 |
MS.gene69572.t1 | AT1G54790 | 30.097 | 412 | 214 | 18 | 1 | 361 | 6 | 394 | 1.15e-35 | 135 |
MS.gene69572.t1 | AT1G28610 | 40.097 | 207 | 108 | 8 | 6 | 204 | 7 | 205 | 6.81e-34 | 126 |
MS.gene69572.t1 | AT4G01130 | 33.692 | 279 | 161 | 8 | 27 | 293 | 32 | 298 | 9.78e-34 | 128 |
MS.gene69572.t1 | AT3G27950 | 31.268 | 355 | 206 | 11 | 27 | 363 | 30 | 364 | 1.41e-33 | 128 |
MS.gene69572.t1 | AT1G56670 | 31.429 | 315 | 176 | 11 | 1 | 293 | 1 | 297 | 2.69e-31 | 120 |
MS.gene69572.t1 | AT2G40250 | 29.041 | 365 | 219 | 13 | 3 | 350 | 9 | 350 | 1.81e-30 | 119 |
MS.gene69572.t1 | AT5G40990 | 30.645 | 372 | 218 | 14 | 4 | 358 | 11 | 359 | 1.82e-30 | 120 |
MS.gene69572.t1 | AT3G14225 | 27.907 | 344 | 211 | 11 | 29 | 357 | 37 | 358 | 1.32e-29 | 117 |
MS.gene69572.t1 | AT1G71120 | 26.765 | 340 | 209 | 11 | 29 | 356 | 31 | 342 | 6.36e-29 | 115 |
MS.gene69572.t1 | AT3G14225 | 27.907 | 344 | 215 | 11 | 29 | 357 | 37 | 362 | 1.08e-28 | 115 |
MS.gene69572.t1 | AT5G45950 | 30.612 | 343 | 195 | 13 | 29 | 358 | 40 | 352 | 1.16e-28 | 114 |
MS.gene69572.t1 | AT4G10950 | 28.116 | 345 | 212 | 14 | 25 | 356 | 66 | 387 | 5.87e-28 | 113 |
MS.gene69572.t1 | AT1G75920 | 29.679 | 374 | 201 | 16 | 1 | 355 | 6 | 336 | 8.08e-28 | 112 |
MS.gene69572.t1 | AT1G53920 | 29.167 | 360 | 208 | 16 | 29 | 370 | 48 | 378 | 1.88e-26 | 109 |
MS.gene69572.t1 | AT1G53990 | 26.882 | 372 | 225 | 13 | 3 | 357 | 8 | 349 | 3.56e-26 | 108 |
MS.gene69572.t1 | AT1G53940 | 30.523 | 344 | 204 | 13 | 29 | 358 | 39 | 361 | 3.87e-26 | 108 |
MS.gene69572.t1 | AT1G06990 | 28.818 | 347 | 217 | 13 | 19 | 355 | 27 | 353 | 7.51e-26 | 107 |
MS.gene69572.t1 | AT3G62280 | 29.682 | 283 | 168 | 9 | 20 | 293 | 31 | 291 | 1.03e-25 | 105 |
MS.gene69572.t1 | AT4G10950 | 27.826 | 345 | 209 | 15 | 25 | 356 | 66 | 383 | 2.01e-25 | 106 |
MS.gene69572.t1 | AT1G20132 | 29.204 | 339 | 205 | 13 | 29 | 355 | 61 | 376 | 5.69e-25 | 105 |
MS.gene69572.t1 | AT5G45960 | 26.361 | 349 | 202 | 15 | 29 | 353 | 47 | 364 | 3.09e-24 | 102 |
MS.gene69572.t1 | AT1G75920 | 28.792 | 389 | 200 | 17 | 1 | 355 | 1 | 346 | 3.12e-24 | 102 |
MS.gene69572.t1 | AT1G20120 | 28.116 | 345 | 205 | 12 | 27 | 355 | 76 | 393 | 6.69e-24 | 102 |
MS.gene69572.t1 | AT2G03980 | 30.183 | 328 | 198 | 13 | 27 | 345 | 41 | 346 | 7.62e-24 | 101 |
MS.gene69572.t1 | AT2G03980 | 30.183 | 328 | 198 | 13 | 27 | 345 | 41 | 346 | 7.62e-24 | 101 |
MS.gene69572.t1 | AT2G03980 | 30.183 | 328 | 198 | 13 | 27 | 345 | 41 | 346 | 7.62e-24 | 101 |
MS.gene69572.t1 | AT2G03980 | 30.183 | 328 | 198 | 13 | 27 | 345 | 41 | 346 | 7.62e-24 | 101 |
MS.gene69572.t1 | AT1G23500 | 28.000 | 350 | 195 | 15 | 28 | 360 | 34 | 343 | 1.98e-23 | 100 |
MS.gene69572.t1 | AT1G73610 | 28.198 | 383 | 209 | 18 | 1 | 359 | 1 | 341 | 6.29e-23 | 98.6 |
MS.gene69572.t1 | AT2G04570 | 26.431 | 367 | 221 | 14 | 6 | 354 | 7 | 342 | 1.04e-22 | 98.2 |
MS.gene69572.t1 | AT2G42990 | 29.448 | 326 | 197 | 13 | 29 | 343 | 28 | 331 | 1.42e-22 | 97.8 |
MS.gene69572.t1 | AT1G75920 | 29.283 | 321 | 167 | 14 | 55 | 355 | 28 | 308 | 3.41e-22 | 96.3 |
MS.gene69572.t1 | AT3G09930 | 26.706 | 337 | 215 | 10 | 20 | 349 | 30 | 341 | 5.75e-22 | 96.3 |
MS.gene69572.t1 | AT3G09930 | 26.706 | 337 | 215 | 10 | 20 | 349 | 30 | 341 | 5.75e-22 | 96.3 |
MS.gene69572.t1 | AT5G42170 | 29.217 | 332 | 209 | 10 | 29 | 354 | 50 | 361 | 3.83e-21 | 94.0 |
MS.gene69572.t1 | AT5G15720 | 27.193 | 342 | 200 | 15 | 29 | 350 | 30 | 342 | 4.58e-21 | 93.6 |
MS.gene69572.t1 | AT5G08460 | 27.410 | 332 | 206 | 12 | 27 | 344 | 47 | 357 | 1.04e-20 | 92.8 |
MS.gene69572.t1 | AT4G01130 | 26.846 | 298 | 186 | 10 | 84 | 361 | 1 | 286 | 1.33e-20 | 91.3 |
MS.gene69572.t1 | AT1G71250 | 25.882 | 340 | 225 | 11 | 29 | 360 | 41 | 361 | 1.52e-20 | 92.4 |
MS.gene69572.t1 | AT1G75930 | 28.451 | 355 | 187 | 18 | 27 | 353 | 27 | 342 | 2.85e-20 | 91.3 |
MS.gene69572.t1 | AT2G30310 | 29.121 | 364 | 217 | 18 | 3 | 350 | 8 | 346 | 5.71e-20 | 90.5 |
MS.gene69572.t1 | AT3G16370 | 26.190 | 336 | 218 | 11 | 29 | 354 | 30 | 345 | 8.94e-20 | 89.7 |
MS.gene69572.t1 | AT1G75910 | 26.810 | 373 | 209 | 16 | 3 | 355 | 8 | 336 | 1.21e-19 | 89.4 |
MS.gene69572.t1 | AT5G03610 | 24.194 | 372 | 241 | 12 | 3 | 360 | 11 | 355 | 1.29e-19 | 89.4 |
MS.gene69572.t1 | AT3G14820 | 28.909 | 339 | 200 | 14 | 29 | 354 | 32 | 342 | 1.62e-19 | 89.0 |
MS.gene69572.t1 | AT1G20135 | 25.138 | 362 | 212 | 13 | 3 | 349 | 9 | 326 | 1.67e-19 | 88.6 |
MS.gene69572.t1 | AT1G74460 | 26.835 | 395 | 216 | 17 | 3 | 367 | 6 | 357 | 1.76e-19 | 89.4 |
MS.gene69572.t1 | AT3G04290 | 27.596 | 366 | 223 | 14 | 6 | 358 | 11 | 347 | 1.99e-19 | 89.0 |
MS.gene69572.t1 | AT1G58430 | 27.596 | 366 | 225 | 17 | 4 | 353 | 9 | 350 | 2.76e-19 | 88.6 |
MS.gene69572.t1 | AT4G26790 | 26.163 | 344 | 213 | 12 | 27 | 355 | 27 | 344 | 7.30e-19 | 87.0 |
MS.gene69572.t1 | AT4G26790 | 26.163 | 344 | 213 | 12 | 27 | 355 | 27 | 344 | 7.30e-19 | 87.0 |
MS.gene69572.t1 | AT1G54020 | 26.271 | 354 | 214 | 17 | 16 | 360 | 21 | 336 | 7.91e-19 | 87.4 |
MS.gene69572.t1 | AT1G75920 | 27.322 | 366 | 189 | 15 | 1 | 355 | 6 | 305 | 1.31e-18 | 85.9 |
MS.gene69572.t1 | AT5G22810 | 27.794 | 349 | 219 | 13 | 18 | 354 | 24 | 351 | 1.52e-18 | 86.3 |
MS.gene69572.t1 | AT1G20130 | 26.934 | 349 | 207 | 14 | 29 | 355 | 204 | 526 | 1.58e-18 | 87.4 |
MS.gene69572.t1 | AT1G75900 | 26.944 | 360 | 229 | 12 | 6 | 354 | 20 | 356 | 1.80e-18 | 86.3 |
MS.gene69572.t1 | AT1G20130 | 26.934 | 349 | 207 | 14 | 29 | 355 | 184 | 506 | 1.95e-18 | 87.0 |
MS.gene69572.t1 | AT5G03820 | 26.703 | 367 | 235 | 15 | 1 | 354 | 4 | 349 | 2.43e-18 | 85.9 |
MS.gene69572.t1 | AT2G31540 | 28.184 | 369 | 222 | 17 | 1 | 353 | 9 | 350 | 2.99e-18 | 85.5 |
MS.gene69572.t1 | AT5G03820 | 26.431 | 367 | 236 | 15 | 1 | 354 | 32 | 377 | 7.95e-18 | 84.3 |
MS.gene69572.t1 | AT1G59406 | 28.191 | 376 | 215 | 17 | 1 | 355 | 1 | 342 | 8.16e-18 | 84.0 |
MS.gene69572.t1 | AT1G59030 | 28.191 | 376 | 215 | 17 | 1 | 355 | 1 | 342 | 8.16e-18 | 84.0 |
MS.gene69572.t1 | AT1G58725 | 28.191 | 376 | 215 | 17 | 1 | 355 | 1 | 342 | 8.16e-18 | 84.0 |
MS.gene69572.t1 | AT4G28780 | 27.536 | 345 | 207 | 14 | 28 | 356 | 30 | 347 | 9.64e-18 | 84.0 |
MS.gene69572.t1 | AT5G63170 | 25.893 | 336 | 190 | 14 | 29 | 346 | 28 | 322 | 2.43e-17 | 82.4 |
MS.gene69572.t1 | AT1G29670 | 28.818 | 347 | 198 | 16 | 31 | 359 | 34 | 349 | 3.21e-17 | 82.4 |
MS.gene69572.t1 | AT5G55050 | 27.003 | 337 | 208 | 13 | 29 | 349 | 39 | 353 | 3.39e-17 | 82.4 |
MS.gene69572.t1 | AT1G29670 | 27.746 | 346 | 203 | 15 | 31 | 359 | 102 | 417 | 4.20e-17 | 82.8 |
MS.gene69572.t1 | AT5G18430 | 25.956 | 366 | 227 | 16 | 9 | 356 | 7 | 346 | 4.83e-17 | 82.0 |
MS.gene69572.t1 | AT1G71691 | 27.350 | 351 | 194 | 14 | 29 | 356 | 55 | 367 | 6.00e-17 | 82.0 |
MS.gene69572.t1 | AT2G24560 | 25.788 | 349 | 221 | 14 | 20 | 353 | 24 | 349 | 8.56e-17 | 81.3 |
MS.gene69572.t1 | AT5G03810 | 26.287 | 369 | 233 | 15 | 1 | 354 | 1 | 345 | 1.36e-16 | 80.5 |
MS.gene69572.t1 | AT2G19010 | 28.116 | 345 | 197 | 16 | 31 | 361 | 32 | 339 | 1.41e-16 | 80.5 |
MS.gene69572.t1 | AT2G19010 | 28.116 | 345 | 197 | 16 | 31 | 361 | 62 | 369 | 1.43e-16 | 80.9 |
MS.gene69572.t1 | AT5G15720 | 25.965 | 285 | 169 | 11 | 29 | 293 | 30 | 292 | 1.75e-16 | 79.7 |
MS.gene69572.t1 | AT2G30220 | 28.297 | 364 | 219 | 17 | 3 | 350 | 8 | 345 | 2.27e-16 | 80.1 |
MS.gene69572.t1 | AT1G54010 | 24.642 | 349 | 214 | 16 | 25 | 360 | 32 | 344 | 2.40e-16 | 80.1 |
MS.gene69572.t1 | AT3G53100 | 25.816 | 337 | 217 | 13 | 29 | 354 | 29 | 343 | 5.40e-16 | 79.0 |
MS.gene69572.t1 | AT1G53940 | 29.496 | 278 | 166 | 10 | 28 | 293 | 38 | 297 | 7.55e-16 | 77.8 |
MS.gene69572.t1 | AT5G41890 | 26.273 | 373 | 223 | 13 | 11 | 356 | 12 | 359 | 2.03e-15 | 77.4 |
MS.gene69572.t1 | AT3G14210 | 24.713 | 348 | 218 | 12 | 18 | 353 | 25 | 340 | 3.68e-15 | 76.6 |
MS.gene69572.t1 | AT1G58520 | 25.806 | 341 | 204 | 12 | 29 | 355 | 30 | 335 | 4.72e-15 | 75.9 |
MS.gene69572.t1 | AT1G58525 | 25.806 | 341 | 204 | 12 | 29 | 355 | 30 | 335 | 4.72e-15 | 75.9 |
MS.gene69572.t1 | AT5G37690 | 23.881 | 335 | 214 | 13 | 33 | 353 | 31 | 338 | 8.64e-15 | 75.1 |
MS.gene69572.t1 | AT1G29660 | 26.727 | 333 | 208 | 16 | 31 | 351 | 34 | 342 | 1.02e-14 | 75.1 |
MS.gene69572.t1 | AT5G03600 | 25.672 | 335 | 204 | 14 | 24 | 349 | 9 | 307 | 1.95e-14 | 73.9 |
MS.gene69572.t1 | AT5G03600 | 25.672 | 335 | 204 | 14 | 24 | 349 | 44 | 342 | 3.01e-14 | 73.6 |
MS.gene69572.t1 | AT2G19060 | 26.225 | 347 | 203 | 15 | 31 | 361 | 32 | 341 | 4.94e-14 | 72.8 |
MS.gene69572.t1 | AT1G33811 | 23.720 | 371 | 239 | 16 | 1 | 351 | 4 | 350 | 5.21e-14 | 73.2 |
MS.gene69572.t1 | AT2G36325 | 24.702 | 336 | 210 | 11 | 30 | 354 | 48 | 351 | 1.75e-13 | 71.2 |
MS.gene69572.t1 | AT1G54030 | 23.171 | 328 | 208 | 12 | 28 | 349 | 51 | 340 | 9.01e-13 | 69.7 |
MS.gene69572.t1 | AT1G71691 | 27.574 | 272 | 143 | 10 | 29 | 277 | 55 | 295 | 2.32e-12 | 67.8 |
MS.gene69572.t1 | AT5G15720 | 24.658 | 292 | 173 | 13 | 78 | 350 | 48 | 311 | 1.02e-11 | 65.9 |
MS.gene69572.t1 | AT3G43550 | 27.240 | 279 | 167 | 11 | 29 | 293 | 30 | 286 | 2.78e-11 | 64.3 |
MS.gene69572.t1 | AT1G53970 | 51.515 | 66 | 29 | 1 | 29 | 91 | 20 | 85 | 3.41e-11 | 59.7 |
MS.gene69572.t1 | AT1G53970 | 51.515 | 66 | 29 | 1 | 29 | 91 | 20 | 85 | 3.41e-11 | 59.7 |
Find 72 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTGAAAGGAGCAGGTTTA+AGG | 0.171469 | 3.1:-34084544 | None:intergenic |
AAAGAGGATTATGATGAATT+TGG | 0.194125 | 3.1:+34084075 | MS.gene69572:CDS |
CATCATAATCCTCTTTCTTC+TGG | 0.251095 | 3.1:-34084068 | None:intergenic |
CATACCACCGTGACGCTAAT+TGG | 0.297782 | 3.1:+34084390 | MS.gene69572:CDS |
TACGAAGCCATCTTTAACTT+TGG | 0.316279 | 3.1:+34083111 | MS.gene69572:CDS |
CAAACAATCATTATTTATAG+TGG | 0.326230 | 3.1:+34083718 | MS.gene69572:CDS |
TGCTTTCGGCAGAACATCTA+TGG | 0.352248 | 3.1:+34083161 | MS.gene69572:CDS |
AAAGCATGTTGTGGAGGAAT+TGG | 0.363705 | 3.1:+34084365 | MS.gene69572:CDS |
CGTAATTGATTCAACTATCA+AGG | 0.368396 | 3.1:-34083810 | None:intergenic |
AAAGAGAATGAAAATCTTCA+TGG | 0.368824 | 3.1:-34083031 | None:intergenic |
CTTGAAAGGAGCAGGTTTAA+GGG | 0.370952 | 3.1:-34084543 | None:intergenic |
AAAATATACTATCTTAGCTT+GGG | 0.372407 | 3.1:-34084181 | None:intergenic |
AGGACCTTCAATTAAACCTT+TGG | 0.383976 | 3.1:-34084507 | None:intergenic |
TTTCTGTCGTAATGTCTCTA+TGG | 0.389347 | 3.1:-34084154 | None:intergenic |
ATGGATAAAAGAAGTCCTTA+TGG | 0.404744 | 3.1:+34083180 | MS.gene69572:CDS |
TTATTTATAGTGGGAGAGAT+TGG | 0.406970 | 3.1:+34083728 | MS.gene69572:CDS |
TATGAAGCACCACAACAATA+TGG | 0.415657 | 3.1:+34084231 | MS.gene69572:CDS |
TCCCTTCTTTGTATCAGCTA+GGG | 0.417238 | 3.1:-34083432 | None:intergenic |
TTGAAATACGTTGAACCATA+AGG | 0.431464 | 3.1:-34083195 | None:intergenic |
TAGACTATCTTGAAAGGAGC+AGG | 0.441952 | 3.1:-34084551 | None:intergenic |
GCAGTTGAGCTAGTGGTTCC+AGG | 0.445047 | 3.1:+34083997 | MS.gene69572:CDS |
CGACTCATCATAGATTTCAT+AGG | 0.447348 | 3.1:+34083246 | MS.gene69572:CDS |
TACTAGGCATTAATTGAAGA+AGG | 0.448453 | 3.1:+34083973 | MS.gene69572:intron |
CAAAATATACTATCTTAGCT+TGG | 0.450001 | 3.1:-34084182 | None:intergenic |
CATCCCATTGGAAAGTTACC+TGG | 0.451479 | 3.1:-34084015 | None:intergenic |
ATAGCCAAAGGTTTAATTGA+AGG | 0.457396 | 3.1:+34084503 | MS.gene69572:CDS |
TGTAGGCTTTACTTCTGATA+AGG | 0.458739 | 3.1:+34084331 | MS.gene69572:intron |
TGGTGCTTCATATAAACGTT+TGG | 0.458875 | 3.1:-34084220 | None:intergenic |
TATTTGCTTATATGCTGCTT+CGG | 0.461985 | 3.1:-34084483 | None:intergenic |
GACACGGGAAACGCTGCTTT+CGG | 0.463262 | 3.1:+34083147 | MS.gene69572:CDS |
CTCCCTTCTTTGTATCAGCT+AGG | 0.478067 | 3.1:-34083433 | None:intergenic |
TTATTGTGTAAAAGCAAAGA+AGG | 0.488816 | 3.1:+34083584 | MS.gene69572:CDS |
ACGTATTTCAAACATCCAAC+GGG | 0.490382 | 3.1:+34083207 | MS.gene69572:CDS |
AACCCTAGCTGATACAAAGA+AGG | 0.493055 | 3.1:+34083430 | MS.gene69572:CDS |
CGTTGAGTGTGCAATTTGAC+TGG | 0.498847 | 3.1:+34083543 | MS.gene69572:CDS |
AAACAATCATTATTTATAGT+GGG | 0.503187 | 3.1:+34083719 | MS.gene69572:CDS |
CAATTAGCGTCACGGTGGTA+TGG | 0.513008 | 3.1:-34084389 | None:intergenic |
AGAGTCACCAAAGTTAAAGA+TGG | 0.513197 | 3.1:-34083118 | None:intergenic |
TTTAGTATTACCTTTGCATG+TGG | 0.514086 | 3.1:+34083051 | MS.gene69572:CDS |
TTTATAGTGGGAGAGATTGG+TGG | 0.518109 | 3.1:+34083731 | MS.gene69572:CDS |
GCTAATTGGTGTGGAATGCC+TGG | 0.524013 | 3.1:+34084404 | MS.gene69572:CDS |
AAAGGAGCAGGTTTAAGGGA+TGG | 0.527635 | 3.1:-34084539 | None:intergenic |
GTTCCAGGTAACTTTCCAAT+GGG | 0.527784 | 3.1:+34084012 | MS.gene69572:CDS |
TTGTTGACATTTAAAGAGGC+CGG | 0.532940 | 3.1:-34083407 | None:intergenic |
TTAAATGTAGCTGAGGCATA+CGG | 0.536180 | 3.1:+34083371 | MS.gene69572:intron |
AACGTATTTCAAACATCCAA+CGG | 0.542080 | 3.1:+34083206 | MS.gene69572:CDS |
AAGATGGCTTCGTATGGTAG+AGG | 0.549261 | 3.1:-34083102 | None:intergenic |
GGTTCCAGGTAACTTTCCAA+TGG | 0.550612 | 3.1:+34084011 | MS.gene69572:CDS |
ATGTCAACATTGCATCCCAT+TGG | 0.563361 | 3.1:-34084027 | None:intergenic |
TTAAGGGATGGATTTGCAGA+AGG | 0.566452 | 3.1:-34084527 | None:intergenic |
CCATCTGACATGCGTCCCGT+TGG | 0.567012 | 3.1:-34083222 | None:intergenic |
CCAACGGGACGCATGTCAGA+TGG | 0.570122 | 3.1:+34083222 | MS.gene69572:CDS |
GTAATTGATTCAACTATCAA+GGG | 0.575388 | 3.1:-34083809 | None:intergenic |
TGAGATATAACATACATTGG+TGG | 0.578047 | 3.1:-34083837 | None:intergenic |
CACCGTGACGCTAATTGGTG+TGG | 0.579361 | 3.1:+34084395 | MS.gene69572:CDS |
CAATTCTAGACTATCTTGAA+AGG | 0.579606 | 3.1:-34084557 | None:intergenic |
TCAGAGCAAACTGTTGTACC+AGG | 0.580648 | 3.1:-34084422 | None:intergenic |
AGAAGGTGCAGTTGAGCTAG+TGG | 0.586681 | 3.1:+34083990 | MS.gene69572:CDS |
CTTTACACACCATATTGTTG+TGG | 0.589049 | 3.1:-34084240 | None:intergenic |
CTCAACGAGTTATTTGTCGC+GGG | 0.589753 | 3.1:-34083527 | None:intergenic |
AAGTTAAAGATGGCTTCGTA+TGG | 0.591022 | 3.1:-34083108 | None:intergenic |
AAATATTATTATGATCATAG+TGG | 0.607839 | 3.1:+34083494 | MS.gene69572:CDS |
ACCCTAGCTGATACAAAGAA+GGG | 0.622754 | 3.1:+34083431 | MS.gene69572:CDS |
TGGTGACTCTACAAGTGACA+CGG | 0.631100 | 3.1:+34083131 | MS.gene69572:CDS |
AAATATACTATCTTAGCTTG+GGG | 0.633730 | 3.1:-34084180 | None:intergenic |
GCATATAAGCAAATAGCCAA+AGG | 0.635574 | 3.1:+34084491 | MS.gene69572:CDS |
TATGCTGCTTCGGTTAAGTG+AGG | 0.639327 | 3.1:-34084473 | None:intergenic |
TTCCACACCAATTAGCGTCA+CGG | 0.646318 | 3.1:-34084397 | None:intergenic |
TTATTATGATCATAGTGGAG+TGG | 0.656693 | 3.1:+34083499 | MS.gene69572:CDS |
ACTCAACGAGTTATTTGTCG+CGG | 0.663418 | 3.1:-34083528 | None:intergenic |
GGTGACTCTACAAGTGACAC+GGG | 0.677598 | 3.1:+34083132 | MS.gene69572:CDS |
CACACCAATTAGCGTCACGG+TGG | 0.757662 | 3.1:-34084394 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATTTAATTTTTCTTACT+AGG | + | chr3.1:34083957-34083976 | MS.gene69572:intron | 10.0% |
!! | AAACAATCATTATTTATAGT+GGG | + | chr3.1:34083719-34083738 | MS.gene69572:CDS | 15.0% |
!! | AAATATTATTATGATCATAG+TGG | + | chr3.1:34083494-34083513 | MS.gene69572:CDS | 15.0% |
!! | ATATAATCTATAACTTAAAG+AGG | - | chr3.1:34083903-34083922 | None:intergenic | 15.0% |
!!! | TCAAAACTAATAAATTTTGA+TGG | + | chr3.1:34084449-34084468 | MS.gene69572:CDS | 15.0% |
!!! | TCAAAATTTATTAGTTTTGA+AGG | - | chr3.1:34084449-34084468 | None:intergenic | 15.0% |
!! | AAAATATACTATCTTAGCTT+GGG | - | chr3.1:34084184-34084203 | None:intergenic | 20.0% |
!! | CAAACAATCATTATTTATAG+TGG | + | chr3.1:34083718-34083737 | MS.gene69572:CDS | 20.0% |
!! | TATTATTTGTGTCAAATTCA+TGG | + | chr3.1:34083628-34083647 | MS.gene69572:intron | 20.0% |
! | AAAGAGGATTATGATGAATT+TGG | + | chr3.1:34084075-34084094 | MS.gene69572:CDS | 25.0% |
! | ATCAAATGAATTGCTTAACA+AGG | - | chr3.1:34084280-34084299 | None:intergenic | 25.0% |
! | CAAAATATACTATCTTAGCT+TGG | - | chr3.1:34084185-34084204 | None:intergenic | 25.0% |
! | TTATTGTGTAAAAGCAAAGA+AGG | + | chr3.1:34083584-34083603 | MS.gene69572:CDS | 25.0% |
! | TTTATGTGCATTAATGATGT+AGG | + | chr3.1:34084314-34084333 | MS.gene69572:intron | 25.0% |
!! | AAATATACTATCTTAGCTTG+GGG | - | chr3.1:34084183-34084202 | None:intergenic | 25.0% |
!! | ATCTGAGATATAACATACAT+TGG | - | chr3.1:34083843-34083862 | None:intergenic | 25.0% |
!! | GTAATTGATTCAACTATCAA+GGG | - | chr3.1:34083812-34083831 | None:intergenic | 25.0% |
!!! | TCTTTGCTTTTACACAATAA+GGG | - | chr3.1:34083584-34083603 | None:intergenic | 25.0% |
!!! | TGTTATTTTAAATGTAGCTG+AGG | + | chr3.1:34083364-34083383 | MS.gene69572:intron | 25.0% |
!!! | TTCTTTGCTTTTACACAATA+AGG | - | chr3.1:34083585-34083604 | None:intergenic | 25.0% |
!!! | TTTTAAAAATCCACATGCAA+AGG | - | chr3.1:34083064-34083083 | None:intergenic | 25.0% |
AAAAATTAGCCAGAAGAAAG+AGG | + | chr3.1:34084059-34084078 | MS.gene69572:CDS | 30.0% | |
AACGTATTTCAAACATCCAA+CGG | + | chr3.1:34083206-34083225 | MS.gene69572:CDS | 30.0% | |
ATAGCCAAAGGTTTAATTGA+AGG | + | chr3.1:34084503-34084522 | MS.gene69572:CDS | 30.0% | |
ATGGATAAAAGAAGTCCTTA+TGG | + | chr3.1:34083180-34083199 | MS.gene69572:CDS | 30.0% | |
CAAATAATATGCAAGAAGGT+AGG | - | chr3.1:34083617-34083636 | None:intergenic | 30.0% | |
GACACAAATAATATGCAAGA+AGG | - | chr3.1:34083621-34083640 | None:intergenic | 30.0% | |
TACTAGGCATTAATTGAAGA+AGG | + | chr3.1:34083973-34083992 | MS.gene69572:intron | 30.0% | |
TGAGATATAACATACATTGG+TGG | - | chr3.1:34083840-34083859 | None:intergenic | 30.0% | |
TTAATGCACATAAACTAGTG+AGG | - | chr3.1:34084308-34084327 | None:intergenic | 30.0% | |
TTGAAATACGTTGAACCATA+AGG | - | chr3.1:34083198-34083217 | None:intergenic | 30.0% | |
TTTAGTATTACCTTTGCATG+TGG | + | chr3.1:34083051-34083070 | MS.gene69572:CDS | 30.0% | |
! | AAGGGAGTTAATTTTGCTTT+TGG | + | chr3.1:34083449-34083468 | MS.gene69572:CDS | 30.0% |
! | CGTAATTGATTCAACTATCA+AGG | - | chr3.1:34083813-34083832 | None:intergenic | 30.0% |
! | TATTTGCTTATATGCTGCTT+CGG | - | chr3.1:34084486-34084505 | None:intergenic | 30.0% |
! | TTATTATGATCATAGTGGAG+TGG | + | chr3.1:34083499-34083518 | MS.gene69572:CDS | 30.0% |
! | TTATTTATAGTGGGAGAGAT+TGG | + | chr3.1:34083728-34083747 | MS.gene69572:CDS | 30.0% |
!!! | GGTTTTGTTGACATTTAAAG+AGG | - | chr3.1:34083414-34083433 | None:intergenic | 30.0% |
AAGTTAAAGATGGCTTCGTA+TGG | - | chr3.1:34083111-34083130 | None:intergenic | 35.0% | |
ACGTATTTCAAACATCCAAC+GGG | + | chr3.1:34083207-34083226 | MS.gene69572:CDS | 35.0% | |
AGAGTCACCAAAGTTAAAGA+TGG | - | chr3.1:34083121-34083140 | None:intergenic | 35.0% | |
AGGACCTTCAATTAAACCTT+TGG | - | chr3.1:34084510-34084529 | None:intergenic | 35.0% | |
CATCATAATCCTCTTTCTTC+TGG | - | chr3.1:34084071-34084090 | None:intergenic | 35.0% | |
CGACTCATCATAGATTTCAT+AGG | + | chr3.1:34083246-34083265 | MS.gene69572:CDS | 35.0% | |
CTTTACACACCATATTGTTG+TGG | - | chr3.1:34084243-34084262 | None:intergenic | 35.0% | |
GCATATAAGCAAATAGCCAA+AGG | + | chr3.1:34084491-34084510 | MS.gene69572:CDS | 35.0% | |
TGGTGCTTCATATAAACGTT+TGG | - | chr3.1:34084223-34084242 | None:intergenic | 35.0% | |
TGTAGGCTTTACTTCTGATA+AGG | + | chr3.1:34084331-34084350 | MS.gene69572:intron | 35.0% | |
TTAAATGTAGCTGAGGCATA+CGG | + | chr3.1:34083371-34083390 | MS.gene69572:intron | 35.0% | |
TTGTTGACATTTAAAGAGGC+CGG | - | chr3.1:34083410-34083429 | None:intergenic | 35.0% | |
TTTCTGTCGTAATGTCTCTA+TGG | - | chr3.1:34084157-34084176 | None:intergenic | 35.0% | |
! | TACGAAGCCATCTTTAACTT+TGG | + | chr3.1:34083111-34083130 | MS.gene69572:CDS | 35.0% |
! | TATGAAGCACCACAACAATA+TGG | + | chr3.1:34084231-34084250 | MS.gene69572:CDS | 35.0% |
!! | ATTTTGAAAGCATGTTGTGG+AGG | + | chr3.1:34084359-34084378 | MS.gene69572:CDS | 35.0% |
!! | GAGATTTTGAAAGCATGTTG+TGG | + | chr3.1:34084356-34084375 | MS.gene69572:CDS | 35.0% |
!! | GGAGTTAATTTTGCTTTTGG+AGG | + | chr3.1:34083452-34083471 | MS.gene69572:CDS | 35.0% |
AAAGCATGTTGTGGAGGAAT+TGG | + | chr3.1:34084365-34084384 | MS.gene69572:CDS | 40.0% | |
AACCCTAGCTGATACAAAGA+AGG | + | chr3.1:34083430-34083449 | MS.gene69572:CDS | 40.0% | |
ACCCTAGCTGATACAAAGAA+GGG | + | chr3.1:34083431-34083450 | MS.gene69572:CDS | 40.0% | |
ACTCAACGAGTTATTTGTCG+CGG | - | chr3.1:34083531-34083550 | None:intergenic | 40.0% | |
ATGTCAACATTGCATCCCAT+TGG | - | chr3.1:34084030-34084049 | None:intergenic | 40.0% | |
CTTGAAAGGAGCAGGTTTAA+GGG | - | chr3.1:34084546-34084565 | None:intergenic | 40.0% | |
GCACATAAACTAGTGAGGAT+GGG | - | chr3.1:34084303-34084322 | None:intergenic | 40.0% | |
GTTCCAGGTAACTTTCCAAT+GGG | + | chr3.1:34084012-34084031 | MS.gene69572:CDS | 40.0% | |
TAGACTATCTTGAAAGGAGC+AGG | - | chr3.1:34084554-34084573 | None:intergenic | 40.0% | |
TCCCTTCTTTGTATCAGCTA+GGG | - | chr3.1:34083435-34083454 | None:intergenic | 40.0% | |
TCTTGAAAGGAGCAGGTTTA+AGG | - | chr3.1:34084547-34084566 | None:intergenic | 40.0% | |
TGCACATAAACTAGTGAGGA+TGG | - | chr3.1:34084304-34084323 | None:intergenic | 40.0% | |
TTTAAAGAGGCCGGCAAAAA+TGG | - | chr3.1:34083401-34083420 | None:intergenic | 40.0% | |
! | TTAAGGGATGGATTTGCAGA+AGG | - | chr3.1:34084530-34084549 | None:intergenic | 40.0% |
! | TTTATAGTGGGAGAGATTGG+TGG | + | chr3.1:34083731-34083750 | MS.gene69572:CDS | 40.0% |
!!! | ATACGGATTGCCATTTTTGC+CGG | + | chr3.1:34083388-34083407 | MS.gene69572:CDS | 40.0% |
AAAGGAGCAGGTTTAAGGGA+TGG | - | chr3.1:34084542-34084561 | None:intergenic | 45.0% | |
AAGATGGCTTCGTATGGTAG+AGG | - | chr3.1:34083105-34083124 | None:intergenic | 45.0% | |
CATCCCATTGGAAAGTTACC+TGG | - | chr3.1:34084018-34084037 | None:intergenic | 45.0% | |
CGTTGAGTGTGCAATTTGAC+TGG | + | chr3.1:34083543-34083562 | MS.gene69572:CDS | 45.0% | |
CTCAACGAGTTATTTGTCGC+GGG | - | chr3.1:34083530-34083549 | None:intergenic | 45.0% | |
CTCCCTTCTTTGTATCAGCT+AGG | - | chr3.1:34083436-34083455 | None:intergenic | 45.0% | |
GGTTCCAGGTAACTTTCCAA+TGG | + | chr3.1:34084011-34084030 | MS.gene69572:CDS | 45.0% | |
TCAGAGCAAACTGTTGTACC+AGG | - | chr3.1:34084425-34084444 | None:intergenic | 45.0% | |
TGCTTTCGGCAGAACATCTA+TGG | + | chr3.1:34083161-34083180 | MS.gene69572:CDS | 45.0% | |
TGGTGACTCTACAAGTGACA+CGG | + | chr3.1:34083131-34083150 | MS.gene69572:CDS | 45.0% | |
TTCCACACCAATTAGCGTCA+CGG | - | chr3.1:34084400-34084419 | None:intergenic | 45.0% | |
! | TATGCTGCTTCGGTTAAGTG+AGG | - | chr3.1:34084476-34084495 | None:intergenic | 45.0% |
CAATTAGCGTCACGGTGGTA+TGG | - | chr3.1:34084392-34084411 | None:intergenic | 50.0% | |
CATACCACCGTGACGCTAAT+TGG | + | chr3.1:34084390-34084409 | MS.gene69572:CDS | 50.0% | |
GCTAATTGGTGTGGAATGCC+TGG | + | chr3.1:34084404-34084423 | MS.gene69572:CDS | 50.0% | |
GGTGACTCTACAAGTGACAC+GGG | + | chr3.1:34083132-34083151 | MS.gene69572:CDS | 50.0% | |
! | AGAAGGTGCAGTTGAGCTAG+TGG | + | chr3.1:34083990-34084009 | MS.gene69572:CDS | 50.0% |
CACACCAATTAGCGTCACGG+TGG | - | chr3.1:34084397-34084416 | None:intergenic | 55.0% | |
CACCGTGACGCTAATTGGTG+TGG | + | chr3.1:34084395-34084414 | MS.gene69572:CDS | 55.0% | |
GCAGTTGAGCTAGTGGTTCC+AGG | + | chr3.1:34083997-34084016 | MS.gene69572:CDS | 55.0% | |
! | GACACGGGAAACGCTGCTTT+CGG | + | chr3.1:34083147-34083166 | MS.gene69572:CDS | 55.0% |
CCAACGGGACGCATGTCAGA+TGG | + | chr3.1:34083222-34083241 | MS.gene69572:CDS | 60.0% | |
CCATCTGACATGCGTCCCGT+TGG | - | chr3.1:34083225-34083244 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 34083033 | 34084574 | 34083033 | ID=MS.gene69572 |
chr3.1 | mRNA | 34083033 | 34084574 | 34083033 | ID=MS.gene69572.t1;Parent=MS.gene69572 |
chr3.1 | exon | 34083033 | 34083267 | 34083033 | ID=MS.gene69572.t1.exon1;Parent=MS.gene69572.t1 |
chr3.1 | CDS | 34083033 | 34083267 | 34083033 | ID=cds.MS.gene69572.t1;Parent=MS.gene69572.t1 |
chr3.1 | exon | 34083381 | 34083605 | 34083381 | ID=MS.gene69572.t1.exon2;Parent=MS.gene69572.t1 |
chr3.1 | CDS | 34083381 | 34083605 | 34083381 | ID=cds.MS.gene69572.t1;Parent=MS.gene69572.t1 |
chr3.1 | exon | 34083702 | 34083844 | 34083702 | ID=MS.gene69572.t1.exon3;Parent=MS.gene69572.t1 |
chr3.1 | CDS | 34083702 | 34083844 | 34083702 | ID=cds.MS.gene69572.t1;Parent=MS.gene69572.t1 |
chr3.1 | exon | 34083979 | 34084252 | 34083979 | ID=MS.gene69572.t1.exon4;Parent=MS.gene69572.t1 |
chr3.1 | CDS | 34083979 | 34084252 | 34083979 | ID=cds.MS.gene69572.t1;Parent=MS.gene69572.t1 |
chr3.1 | exon | 34084336 | 34084574 | 34084336 | ID=MS.gene69572.t1.exon5;Parent=MS.gene69572.t1 |
chr3.1 | CDS | 34084336 | 34084574 | 34084336 | ID=cds.MS.gene69572.t1;Parent=MS.gene69572.t1 |
Gene Sequence |
Protein sequence |