Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70524.t1 | XP_013461126.1 | 97.4 | 858 | 22 | 0 | 1 | 858 | 1 | 858 | 0.00E+00 | 1728.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70524.t1 | P27480 | 68.6 | 866 | 260 | 7 | 1 | 858 | 1 | 862 | 0.0e+00 | 1209.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70524.t1 | A0A072VAE0 | 97.4 | 858 | 22 | 0 | 1 | 858 | 1 | 858 | 0.0e+00 | 1728.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052709 | MS.gene70524 | 0.884607 | 1.66E-71 | -1.69E-46 |
MS.gene052711 | MS.gene70524 | 0.882311 | 1.16E-70 | -1.69E-46 |
MS.gene059850 | MS.gene70524 | 0.807052 | 6.10E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70524.t1 | MTR_3g081130 | 97.436 | 858 | 22 | 0 | 1 | 858 | 1 | 858 | 0.0 | 1739 |
MS.gene70524.t1 | MTR_3g081130 | 97.328 | 786 | 21 | 0 | 73 | 858 | 1 | 786 | 0.0 | 1596 |
MS.gene70524.t1 | MTR_5g024020 | 68.349 | 872 | 257 | 10 | 1 | 858 | 1 | 867 | 0.0 | 1214 |
MS.gene70524.t1 | MTR_8g018730 | 68.664 | 868 | 258 | 7 | 1 | 858 | 1 | 864 | 0.0 | 1209 |
MS.gene70524.t1 | MTR_8g018735 | 67.391 | 874 | 260 | 8 | 1 | 858 | 1 | 865 | 0.0 | 1196 |
MS.gene70524.t1 | MTR_2g099560 | 66.322 | 870 | 274 | 8 | 1 | 858 | 1 | 863 | 0.0 | 1195 |
MS.gene70524.t1 | MTR_8g018730 | 67.708 | 864 | 243 | 6 | 1 | 858 | 1 | 834 | 0.0 | 1177 |
MS.gene70524.t1 | MTR_2g099570 | 65.465 | 860 | 286 | 6 | 4 | 858 | 8 | 861 | 0.0 | 1169 |
MS.gene70524.t1 | MTR_8g018420 | 64.478 | 853 | 294 | 5 | 10 | 858 | 9 | 856 | 0.0 | 1155 |
MS.gene70524.t1 | MTR_8g018570 | 63.699 | 865 | 302 | 7 | 4 | 858 | 8 | 870 | 0.0 | 1144 |
MS.gene70524.t1 | MTR_5g024020 | 65.367 | 872 | 247 | 11 | 1 | 858 | 1 | 831 | 0.0 | 1144 |
MS.gene70524.t1 | MTR_8g018550 | 64.311 | 863 | 298 | 5 | 4 | 858 | 8 | 868 | 0.0 | 1133 |
MS.gene70524.t1 | MTR_8g020990 | 62.457 | 863 | 314 | 5 | 4 | 858 | 8 | 868 | 0.0 | 1123 |
MS.gene70524.t1 | MTR_8g018430 | 61.538 | 858 | 324 | 5 | 5 | 858 | 6 | 861 | 0.0 | 1121 |
MS.gene70524.t1 | MTR_8g018520 | 62.225 | 863 | 316 | 6 | 4 | 858 | 8 | 868 | 0.0 | 1117 |
MS.gene70524.t1 | MTR_8g018510 | 61.850 | 865 | 317 | 7 | 4 | 858 | 8 | 869 | 0.0 | 1112 |
MS.gene70524.t1 | MTR_8g018690 | 62.297 | 862 | 314 | 6 | 4 | 858 | 8 | 865 | 0.0 | 1110 |
MS.gene70524.t1 | MTR_8g018690 | 60.905 | 862 | 306 | 7 | 4 | 858 | 8 | 845 | 0.0 | 1076 |
MS.gene70524.t1 | MTR_8g018450 | 57.506 | 866 | 322 | 9 | 1 | 858 | 1 | 828 | 0.0 | 1013 |
MS.gene70524.t1 | MTR_1g083020 | 57.143 | 861 | 341 | 7 | 8 | 858 | 16 | 858 | 0.0 | 1000 |
MS.gene70524.t1 | MTR_7g113410 | 55.825 | 867 | 351 | 9 | 6 | 858 | 19 | 867 | 0.0 | 993 |
MS.gene70524.t1 | MTR_1g104650 | 55.300 | 868 | 354 | 9 | 8 | 858 | 6 | 856 | 0.0 | 979 |
MS.gene70524.t1 | MTR_8g018650 | 53.551 | 859 | 329 | 10 | 10 | 858 | 9 | 807 | 0.0 | 904 |
MS.gene70524.t1 | MTR_8g018620 | 53.738 | 856 | 332 | 12 | 10 | 858 | 9 | 807 | 0.0 | 903 |
MS.gene70524.t1 | MTR_8g018590 | 54.512 | 820 | 330 | 11 | 54 | 858 | 32 | 823 | 0.0 | 877 |
MS.gene70524.t1 | MTR_8g018730 | 69.915 | 585 | 170 | 4 | 278 | 858 | 2 | 584 | 0.0 | 844 |
MS.gene70524.t1 | MTR_8g018735 | 66.186 | 624 | 186 | 8 | 1 | 608 | 1 | 615 | 0.0 | 824 |
MS.gene70524.t1 | MTR_8g020970 | 47.138 | 821 | 415 | 11 | 49 | 857 | 113 | 926 | 0.0 | 718 |
MS.gene70524.t1 | MTR_8g080230 | 43.985 | 823 | 426 | 15 | 56 | 858 | 109 | 916 | 0.0 | 661 |
MS.gene70524.t1 | MTR_4g088810 | 43.450 | 771 | 400 | 12 | 96 | 857 | 151 | 894 | 0.0 | 627 |
MS.gene70524.t1 | MTR_3g479460 | 40.672 | 863 | 473 | 17 | 14 | 858 | 62 | 903 | 0.0 | 622 |
MS.gene70524.t1 | MTR_3g079450 | 40.670 | 836 | 458 | 15 | 39 | 858 | 89 | 902 | 0.0 | 621 |
MS.gene70524.t1 | MTR_4g066170 | 39.796 | 882 | 481 | 22 | 4 | 858 | 48 | 906 | 0.0 | 610 |
MS.gene70524.t1 | MTR_3g079420 | 40.728 | 852 | 481 | 13 | 20 | 858 | 25 | 865 | 0.0 | 596 |
MS.gene70524.t1 | MTR_8g011340 | 39.620 | 790 | 446 | 13 | 48 | 816 | 46 | 825 | 0.0 | 588 |
MS.gene70524.t1 | MTR_8g021020 | 63.457 | 405 | 142 | 3 | 459 | 858 | 28 | 431 | 0.0 | 542 |
MS.gene70524.t1 | MTR_8g020970 | 46.060 | 571 | 290 | 10 | 49 | 608 | 113 | 676 | 6.28e-153 | 464 |
MS.gene70524.t1 | MTR_6g452500 | 38.562 | 612 | 347 | 11 | 249 | 844 | 13 | 611 | 5.66e-141 | 432 |
MS.gene70524.t1 | MTR_3g079450 | 40.068 | 584 | 314 | 13 | 39 | 608 | 89 | 650 | 1.52e-130 | 405 |
MS.gene70524.t1 | MTR_7g012030 | 59.664 | 119 | 47 | 1 | 511 | 628 | 85 | 203 | 2.69e-40 | 148 |
MS.gene70524.t1 | MTR_6g046330 | 53.846 | 130 | 48 | 2 | 511 | 628 | 75 | 204 | 1.65e-34 | 134 |
MS.gene70524.t1 | MTR_8g463810 | 33.468 | 248 | 92 | 5 | 398 | 644 | 182 | 357 | 6.54e-31 | 126 |
MS.gene70524.t1 | MTR_3g107560 | 29.956 | 227 | 96 | 7 | 636 | 858 | 7 | 174 | 2.40e-19 | 86.7 |
MS.gene70524.t1 | MTR_4g088805 | 43.956 | 91 | 50 | 1 | 768 | 857 | 1 | 91 | 5.54e-17 | 77.4 |
MS.gene70524.t1 | MTR_2g005920 | 50.000 | 56 | 28 | 0 | 732 | 787 | 58 | 113 | 2.68e-14 | 70.5 |
MS.gene70524.t1 | MTR_5g023990 | 50.000 | 68 | 21 | 1 | 644 | 711 | 145 | 199 | 5.94e-13 | 71.2 |
MS.gene70524.t1 | MTR_7g113408 | 40.580 | 69 | 39 | 1 | 751 | 817 | 8 | 76 | 2.58e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70524.t1 | AT1G55020 | 56.729 | 862 | 340 | 8 | 9 | 858 | 19 | 859 | 0.0 | 991 |
MS.gene70524.t1 | AT3G22400 | 53.218 | 870 | 369 | 10 | 10 | 858 | 34 | 886 | 0.0 | 932 |
MS.gene70524.t1 | AT1G17420 | 44.752 | 867 | 433 | 15 | 8 | 858 | 83 | 919 | 0.0 | 709 |
MS.gene70524.t1 | AT1G72520 | 45.421 | 819 | 432 | 12 | 49 | 858 | 114 | 926 | 0.0 | 703 |
MS.gene70524.t1 | AT3G45140 | 42.770 | 823 | 437 | 15 | 49 | 858 | 95 | 896 | 0.0 | 629 |
MS.gene70524.t1 | AT3G45140 | 44.357 | 762 | 400 | 14 | 110 | 858 | 4 | 754 | 0.0 | 618 |
MS.gene70524.t1 | AT1G67560 | 43.240 | 821 | 434 | 18 | 56 | 858 | 111 | 917 | 0.0 | 613 |
Find 227 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAAGAGAGGTTATTCATTT+TGG | 0.130485 | 3.1:-67299953 | MS.gene70524:CDS |
TTTGAATGGGATAATGATTT+TGG | 0.139751 | 3.1:-67301503 | MS.gene70524:CDS |
TATGATGTTTACAATGATTT+AGG | 0.168997 | 3.1:-67301057 | MS.gene70524:CDS |
CTCCATCTCTGCATATTCTT+TGG | 0.194189 | 3.1:+67298863 | None:intergenic |
TGTTGGAGATCAGTTCTTTC+TGG | 0.199460 | 3.1:-67301585 | MS.gene70524:CDS |
ATGTGGAATTGGATACTTTA+AGG | 0.205166 | 3.1:-67301125 | MS.gene70524:CDS |
TTGTAACGTTGTTACCTTAT+TGG | 0.205979 | 3.1:+67301322 | None:intergenic |
CTTTGAACACCATGTCCTTC+TGG | 0.214131 | 3.1:+67299748 | None:intergenic |
CAAGCTGACTTCCTTGGATT+TGG | 0.218445 | 3.1:-67300741 | MS.gene70524:CDS |
CCTTCACTTGGAGCAGGATT+TGG | 0.225347 | 3.1:-67301938 | MS.gene70524:CDS |
ATCCAGAGCTCCAAGAGTTT+TGG | 0.282255 | 3.1:-67299097 | MS.gene70524:CDS |
GACCTTGCTCGTCCAATTCT+TGG | 0.289384 | 3.1:-67301015 | MS.gene70524:CDS |
CATTGGGATCTAGCTTGCTT+TGG | 0.293511 | 3.1:+67300201 | None:intergenic |
ACTAACTAACTAACCTGTTT+TGG | 0.297314 | 3.1:+67300939 | None:intergenic |
AAGATTATTACTGTCAGTTT+TGG | 0.302148 | 3.1:+67301829 | None:intergenic |
CTGTTGATGGATTAGAGATA+TGG | 0.306225 | 3.1:-67299190 | MS.gene70524:CDS |
GCTCCATATTGTTCGCCATC+TGG | 0.310105 | 3.1:+67299793 | None:intergenic |
GCAAGGTCTCGACTCTTATC+TGG | 0.311917 | 3.1:+67301030 | None:intergenic |
CCCAATAGTGTCTCTATCTA+AGG | 0.316321 | 3.1:-67298525 | None:intergenic |
ATTGGGATCTAGCTTGCTTT+GGG | 0.318628 | 3.1:+67300202 | None:intergenic |
TTCCACGCAGCTGTCAATTT+CGG | 0.322031 | 3.1:-67298957 | MS.gene70524:CDS |
TCAATGAGGGCCTCGGTCTT+TGG | 0.326798 | 3.1:+67298804 | None:intergenic |
CCTTATTGGCAAAGAAAATT+CGG | 0.330425 | 3.1:+67301336 | None:intergenic |
TTCCAAAACTCTTGGAGCTC+TGG | 0.331368 | 3.1:+67299095 | None:intergenic |
AGAGATATGGGATGCTATTA+AGG | 0.334051 | 3.1:-67299177 | MS.gene70524:CDS |
CCATGGGGTGCACTGGCATC+TGG | 0.359640 | 3.1:+67299245 | None:intergenic |
TTCTGCAGTTTACAAGGATT+GGG | 0.364413 | 3.1:-67299452 | MS.gene70524:CDS |
AAAGTGTAGGGCATCTTAAC+CGG | 0.367537 | 3.1:+67298591 | None:intergenic |
TTGGAAGAACCTCCAAGAAT+TGG | 0.374774 | 3.1:+67301003 | None:intergenic |
CCAGTTCGGTTAAGCAAATC+TGG | 0.375916 | 3.1:+67298615 | None:intergenic |
TCAAAGAACAATTTGGCAAT+TGG | 0.376529 | 3.1:-67299731 | MS.gene70524:CDS |
CATTCATCATAGCTACAAAT+AGG | 0.385478 | 3.1:-67299627 | MS.gene70524:CDS |
GTGGCATAAGACTTTGGAAT+AGG | 0.385698 | 3.1:+67299886 | None:intergenic |
TAACTTCAGACATGTGGAAT+TGG | 0.386708 | 3.1:-67301136 | MS.gene70524:CDS |
TCCTTAGATAGAGACACTAT+TGG | 0.386855 | 3.1:+67298524 | None:intergenic |
CACCCAGATGGCGAACAATA+TGG | 0.387853 | 3.1:-67299796 | MS.gene70524:CDS |
GGAATGGGAAATGGATTTGT+TGG | 0.388088 | 3.1:-67301602 | MS.gene70524:CDS |
CGACTTCTTTCCAAAACTCT+TGG | 0.388162 | 3.1:+67299087 | None:intergenic |
CCACCTCCCCATGTCATTCA+AGG | 0.388187 | 3.1:-67300519 | MS.gene70524:intron |
CTTCTGCAGTTTACAAGGAT+TGG | 0.394299 | 3.1:-67299453 | MS.gene70524:CDS |
GCTTCTGATGAAGTTTACTT+AGG | 0.398480 | 3.1:-67298750 | MS.gene70524:CDS |
TCTAATCCATCAACAGCAAA+AGG | 0.402862 | 3.1:+67299197 | None:intergenic |
TCCCATCATCTTTCAAGAAT+AGG | 0.410296 | 3.1:+67299854 | None:intergenic |
TTGAAGCAAGCTGACTTCCT+TGG | 0.412899 | 3.1:-67300747 | MS.gene70524:CDS |
AAGGAGGTTAATTCCTGAAA+AGG | 0.413826 | 3.1:-67298889 | MS.gene70524:CDS |
AAGCTAGATCCCAATGTCTA+TGG | 0.414423 | 3.1:-67300194 | MS.gene70524:CDS |
GTTGTTGGTGGTGTTATTGA+TGG | 0.414806 | 3.1:-67301902 | MS.gene70524:CDS |
TGACCAAACACTTCATCTCT+TGG | 0.417315 | 3.1:+67300771 | None:intergenic |
ATCCTATTCTTGAAAGATGA+TGG | 0.417499 | 3.1:-67299856 | MS.gene70524:CDS |
TTACATTTCTTTGCAACTCA+TGG | 0.419402 | 3.1:-67301388 | MS.gene70524:CDS |
CTTCTGATGAAGTTTACTTA+GGG | 0.425996 | 3.1:-67298749 | MS.gene70524:CDS |
ATTTCCTTTACCATTGCAAT+GGG | 0.435335 | 3.1:+67300576 | None:intergenic |
TTCCTTGGATTTGGATTGAA+AGG | 0.437541 | 3.1:-67300732 | MS.gene70524:CDS |
ACCAACCTTGGCAGCAAGAC+AGG | 0.439184 | 3.1:-67301543 | MS.gene70524:CDS |
CCTTAGATAGAGACACTATT+GGG | 0.439659 | 3.1:+67298525 | None:intergenic |
GGCAGAAAACCTACCAAAAC+AGG | 0.440053 | 3.1:-67300952 | MS.gene70524:intron |
AACAGGAATGCGTGAGGAAT+GGG | 0.441400 | 3.1:-67301094 | MS.gene70524:CDS |
ATGGTGTTCAAAGAACAATT+TGG | 0.442618 | 3.1:-67299738 | MS.gene70524:CDS |
CAAAAGGTTTGCAAAGAAGA+TGG | 0.447060 | 3.1:-67298676 | MS.gene70524:CDS |
ATTAACCTCCTTGTCATAGT+TGG | 0.447136 | 3.1:+67298900 | None:intergenic |
ACATGAAATGCCAGCTCCAC+TGG | 0.447913 | 3.1:-67301160 | MS.gene70524:CDS |
GATGTCTTCTGCAGTTTACA+AGG | 0.449432 | 3.1:-67299458 | MS.gene70524:CDS |
CCAGATTTGCTTAACCGAAC+TGG | 0.454793 | 3.1:-67298615 | MS.gene70524:CDS |
TTGTTCTCAAATAAGCCCTT+TGG | 0.455349 | 3.1:+67298832 | None:intergenic |
AACAATTTGGCAATTGGCCA+AGG | 0.456696 | 3.1:-67299725 | MS.gene70524:CDS |
TGCATCCTGTCTTGCTGCCA+AGG | 0.457351 | 3.1:+67301538 | None:intergenic |
GATGGTGCTACTGCTATCTT+AGG | 0.457579 | 3.1:-67301884 | MS.gene70524:CDS |
CTTGCTCGTCCAATTCTTGG+AGG | 0.462376 | 3.1:-67301012 | MS.gene70524:CDS |
GCGAAGTCCATGGGGTGCAC+TGG | 0.462964 | 3.1:+67299238 | None:intergenic |
ATCTCAACAGCGTACGGTCC+TGG | 0.464307 | 3.1:+67299478 | None:intergenic |
ATTAAAGCTGGCCCTTCACT+TGG | 0.465536 | 3.1:-67301950 | MS.gene70524:CDS |
CTCCATATTGTTCGCCATCT+GGG | 0.465552 | 3.1:+67299794 | None:intergenic |
GAGCTCTGGATCTCTTTGAA+TGG | 0.465944 | 3.1:+67299109 | None:intergenic |
GATTTGAATGATATTAAAGC+TGG | 0.467829 | 3.1:-67301962 | MS.gene70524:CDS |
TGTGGAATTGGATACTTTAA+GGG | 0.470355 | 3.1:-67301124 | MS.gene70524:CDS |
TGAGTTGCAAAGAAATGTAA+TGG | 0.473824 | 3.1:+67301391 | None:intergenic |
AGTCTTGCTCAATAATCATA+TGG | 0.473855 | 3.1:-67298992 | MS.gene70524:CDS |
GTCCCAAGAGATGAAGTGTT+TGG | 0.474010 | 3.1:-67300774 | MS.gene70524:CDS |
GTTTGATCTCCATAGACATT+GGG | 0.475274 | 3.1:+67300185 | None:intergenic |
AGGCAAGAGTAGCCTTCAAA+AGG | 0.476014 | 3.1:-67298692 | MS.gene70524:CDS |
GCAAGTCAAGCCTTCTCCAC+TGG | 0.478246 | 3.1:+67298557 | None:intergenic |
TGCTAACCTCTTGATAAGAT+CGG | 0.484839 | 3.1:+67299405 | None:intergenic |
CAAGTTTCCCTATCCTCGTA+GGG | 0.485796 | 3.1:-67300983 | MS.gene70524:CDS |
TCGGCAGGTAGTGCTTGGTC+GGG | 0.486620 | 3.1:+67299424 | None:intergenic |
ACTTTAAGGGGAGATGGAAC+AGG | 0.489102 | 3.1:-67301111 | MS.gene70524:CDS |
GGTTGTAGAAGCTTATGAAT+AGG | 0.489425 | 3.1:+67299586 | None:intergenic |
CCTACGAGGATAGGGAAACT+TGG | 0.489743 | 3.1:+67300984 | None:intergenic |
GCATCTTAACCGGGCCAGTT+CGG | 0.489800 | 3.1:+67298601 | None:intergenic |
TATCACAAGGCGAAGTCCAT+GGG | 0.490697 | 3.1:+67299229 | None:intergenic |
GTCCTAGTGGCATAAGACTT+TGG | 0.491486 | 3.1:+67299880 | None:intergenic |
TTCACCAACTCATGAGTCAC+TGG | 0.491593 | 3.1:-67299675 | MS.gene70524:CDS |
TGATGGGACTTTAAAACCAT+TGG | 0.493571 | 3.1:-67299839 | MS.gene70524:CDS |
TCCTGTCTTGCTGCCAAGGT+TGG | 0.493945 | 3.1:+67301542 | None:intergenic |
GGTTCTTCCCCTACGAGGAT+AGG | 0.494309 | 3.1:+67300975 | None:intergenic |
TACATTTCTTTGCAACTCAT+GGG | 0.494808 | 3.1:-67301387 | MS.gene70524:CDS |
TATCCTCGTAGGGGAAGAAC+CGG | 0.497238 | 3.1:-67300973 | MS.gene70524:CDS |
ATCGGCAGGTAGTGCTTGGT+CGG | 0.497811 | 3.1:+67299423 | None:intergenic |
CCAAGTTTCCCTATCCTCGT+AGG | 0.499485 | 3.1:-67300984 | MS.gene70524:CDS |
ACAATATCTCTATCACTGTA+AGG | 0.499764 | 3.1:+67298781 | None:intergenic |
GAACAGGAATGCGTGAGGAA+TGG | 0.500039 | 3.1:-67301095 | MS.gene70524:CDS |
GGATGGGCTCACAGTAGAAA+AGG | 0.502461 | 3.1:-67300126 | MS.gene70524:intron |
TGTTGATGGATTAGAGATAT+GGG | 0.503457 | 3.1:-67299189 | MS.gene70524:CDS |
TTTGCTTAACCGAACTGGCC+CGG | 0.506455 | 3.1:-67298610 | MS.gene70524:CDS |
TTGGATACTTTAAGGGGAGA+TGG | 0.507834 | 3.1:-67301117 | MS.gene70524:CDS |
GGAAAAGAGAGAATGATGAA+TGG | 0.508626 | 3.1:-67298728 | MS.gene70524:CDS |
GAATGGCTCAATCACGCAAT+GGG | 0.509022 | 3.1:+67299645 | None:intergenic |
GCTGGCCCTTCACTTGGAGC+AGG | 0.509825 | 3.1:-67301944 | MS.gene70524:CDS |
GACCAAACACTTCATCTCTT+GGG | 0.510760 | 3.1:+67300772 | None:intergenic |
ACTCATGAGTTGGTGAAAGC+AGG | 0.511744 | 3.1:+67299681 | None:intergenic |
TTTGCAAGAGAAATGCTTGC+TGG | 0.513602 | 3.1:-67300367 | MS.gene70524:CDS |
CTGAAGTTAACCAGTGGAGC+TGG | 0.514396 | 3.1:+67301150 | None:intergenic |
TCGTCAATCGAATTCATCTC+AGG | 0.514465 | 3.1:+67299023 | None:intergenic |
CACTTGGAGATTAACATGGA+TGG | 0.517226 | 3.1:-67300143 | MS.gene70524:CDS |
TACAATAACAAAAGAACACT+TGG | 0.517945 | 3.1:-67300159 | MS.gene70524:CDS |
ATTTACAACTACATAAGCCT+TGG | 0.519818 | 3.1:+67299708 | None:intergenic |
TAGCCCCATTGCAATGGTAA+AGG | 0.519925 | 3.1:-67300580 | MS.gene70524:CDS |
GTTCTTCCCCTACGAGGATA+GGG | 0.521362 | 3.1:+67300976 | None:intergenic |
GATTTCCTTTACCATTGCAA+TGG | 0.524164 | 3.1:+67300575 | None:intergenic |
GGATCTAGCTTGCTTTGGGG+TGG | 0.524788 | 3.1:+67300206 | None:intergenic |
GGTTTGATCTCCATAGACAT+TGG | 0.526818 | 3.1:+67300184 | None:intergenic |
CTATCACAAGGCGAAGTCCA+TGG | 0.527442 | 3.1:+67299228 | None:intergenic |
ACCTCCTTGTCATAGTTGGT+CGG | 0.527472 | 3.1:+67298904 | None:intergenic |
CCTTGAATGACATGGGGAGG+TGG | 0.527778 | 3.1:+67300519 | None:intergenic |
AGGAGGTTAATTCCTGAAAA+GGG | 0.528440 | 3.1:-67298888 | MS.gene70524:CDS |
GGCCTTGTTAGAGACGTTGT+TGG | 0.529037 | 3.1:-67301917 | MS.gene70524:CDS |
CTATTTGTAGCTATGATGAA+TGG | 0.530723 | 3.1:+67299628 | None:intergenic |
GGCATTTCATGTGGAAGGTA+TGG | 0.532327 | 3.1:+67301171 | None:intergenic |
GGAAGGTAAAAGCAAAGTGT+AGG | 0.537525 | 3.1:+67298578 | None:intergenic |
GATGGAGAAAGATGACCAAA+GGG | 0.537526 | 3.1:-67298847 | MS.gene70524:CDS |
AACCTCTTGATAAGATCGGC+AGG | 0.537837 | 3.1:+67299409 | None:intergenic |
TATTGTTCGCCATCTGGGTG+TGG | 0.538814 | 3.1:+67299799 | None:intergenic |
TGTAAGGTCAATGAGGGCCT+CGG | 0.540311 | 3.1:+67298797 | None:intergenic |
AACCTTTCAATCCAAATCCA+AGG | 0.541856 | 3.1:+67300730 | None:intergenic |
TGGAGGTGGCATTATAGAGC+AGG | 0.544535 | 3.1:-67299509 | MS.gene70524:CDS |
AAGGAAATCTTCCGAACTGA+TGG | 0.545276 | 3.1:-67300561 | MS.gene70524:CDS |
CCAAATCCTGCTCCAAGTGA+AGG | 0.545608 | 3.1:+67301938 | None:intergenic |
GAAGTACGTTGCCTCTTCGA+AGG | 0.547214 | 3.1:-67300639 | MS.gene70524:CDS |
GATGAATTCGATTGACGAGC+TGG | 0.547332 | 3.1:-67299018 | MS.gene70524:CDS |
TCCTATTCTTGAAAGATGAT+GGG | 0.547660 | 3.1:-67299855 | MS.gene70524:CDS |
TTGGGATCTAGCTTGCTTTG+GGG | 0.548828 | 3.1:+67300203 | None:intergenic |
AAACTTAGTTCGATGGCCAA+TGG | 0.549498 | 3.1:+67299823 | None:intergenic |
AATTTCGGACAATATCCTTA+CGG | 0.550104 | 3.1:-67298942 | MS.gene70524:CDS |
AACCAAAGAATATGCAGAGA+TGG | 0.552733 | 3.1:-67298865 | MS.gene70524:CDS |
TGCTATTAGCCCCATTGCAA+TGG | 0.555439 | 3.1:-67300586 | MS.gene70524:CDS |
TGAATGGACAGCTGATGAAA+AGG | 0.557554 | 3.1:-67298712 | MS.gene70524:CDS |
CTAATCCATCAACAGCAAAA+GGG | 0.562213 | 3.1:+67299198 | None:intergenic |
ACATAGTTAGTATCAGCTGC+TGG | 0.563293 | 3.1:+67300795 | None:intergenic |
CGGCAGGTAGTGCTTGGTCG+GGG | 0.563824 | 3.1:+67299425 | None:intergenic |
CAAGAATAGGATTGTCCTAG+TGG | 0.567428 | 3.1:+67299867 | None:intergenic |
AAAAGAAGCAAAAGATTAAG+GGG | 0.567519 | 3.1:-67302015 | MS.gene70524:CDS |
TAAGATCGGCAGGTAGTGCT+TGG | 0.567570 | 3.1:+67299419 | None:intergenic |
TGGAAAGAAGTCGTAGAGAT+CGG | 0.569928 | 3.1:-67299077 | MS.gene70524:CDS |
ATGGGATGCTATTAAGGCAT+GGG | 0.571991 | 3.1:-67299171 | MS.gene70524:CDS |
AAGTGTAGGGCATCTTAACC+GGG | 0.572310 | 3.1:+67298592 | None:intergenic |
ACTTGGAGATTAACATGGAT+GGG | 0.577979 | 3.1:-67300142 | MS.gene70524:CDS |
CTTGTTAGAGACGTTGTTGG+TGG | 0.579540 | 3.1:-67301914 | MS.gene70524:CDS |
TAGCAAACCTTGAATGACAT+GGG | 0.581902 | 3.1:+67300512 | None:intergenic |
GTTGATGTGCAAGAATGCAT+TGG | 0.582276 | 3.1:-67301984 | MS.gene70524:CDS |
AGTTCATTGATCAGTGGAGG+TGG | 0.583364 | 3.1:-67299523 | MS.gene70524:CDS |
GAAGGTAAAAGCAAAGTGTA+GGG | 0.585152 | 3.1:+67298579 | None:intergenic |
CACCAACAACGTCTCTAACA+AGG | 0.585280 | 3.1:+67301915 | None:intergenic |
TGAACATCAATGCACTTGCT+CGG | 0.585440 | 3.1:-67299546 | MS.gene70524:CDS |
TTCAAGATTAAACCACCGTA+AGG | 0.588798 | 3.1:+67298927 | None:intergenic |
AGATGGAGAAAGATGACCAA+AGG | 0.590304 | 3.1:-67298848 | MS.gene70524:CDS |
GGAGAAGGCTTGACTTGCAG+AGG | 0.594409 | 3.1:-67298552 | MS.gene70524:CDS |
GAATTCGATTGACGAGCTGG+TGG | 0.595464 | 3.1:-67299015 | MS.gene70524:CDS |
CAAATCCTGCTCCAAGTGAA+GGG | 0.596599 | 3.1:+67301939 | None:intergenic |
GAAGACATCTCAACAGCGTA+CGG | 0.596717 | 3.1:+67299472 | None:intergenic |
CGGAGTTCATTGATCAGTGG+AGG | 0.597825 | 3.1:-67299526 | MS.gene70524:CDS |
TGAATGGCTCAATCACGCAA+TGG | 0.601832 | 3.1:+67299644 | None:intergenic |
GTGTGGCAAACTTAGTTCGA+TGG | 0.601953 | 3.1:+67299816 | None:intergenic |
CTATCACTGTAAGGTCAATG+AGG | 0.603331 | 3.1:+67298790 | None:intergenic |
TTCATTGTGTCGCGATAGTG+AGG | 0.604171 | 3.1:+67299565 | None:intergenic |
TCAACCAGTGACTCATGAGT+TGG | 0.604385 | 3.1:+67299671 | None:intergenic |
CTTCAAGAGTTAAACTCACA+AGG | 0.604676 | 3.1:+67301432 | None:intergenic |
CTCCAAGAATTGGACGAGCA+AGG | 0.604855 | 3.1:+67301013 | None:intergenic |
AATGTAATGGAATCATGACC+AGG | 0.605186 | 3.1:+67301404 | None:intergenic |
TGAAGTCTTTGAATCACACA+TGG | 0.606497 | 3.1:+67300337 | None:intergenic |
GCTATCTTAGGCCGTAGTGT+TGG | 0.606801 | 3.1:-67301872 | MS.gene70524:CDS |
GTCAAGCCTTCTCCACTGGA+AGG | 0.607236 | 3.1:+67298561 | None:intergenic |
CTGCCGGTTCTTCCCCTACG+AGG | 0.609174 | 3.1:+67300970 | None:intergenic |
TTACAGCTGATAAGTCTGCA+TGG | 0.612258 | 3.1:-67300405 | MS.gene70524:intron |
TTAACTCTTGAAGACATACC+TGG | 0.612617 | 3.1:-67301422 | MS.gene70524:CDS |
TATGGGATGCTATTAAGGCA+TGG | 0.612849 | 3.1:-67299172 | MS.gene70524:CDS |
ATAGCACTGATGATATCTGT+AGG | 0.618114 | 3.1:+67300603 | None:intergenic |
AGTGGAGCTGGCATTTCATG+TGG | 0.620063 | 3.1:+67301162 | None:intergenic |
TTAGCAAACCTTGAATGACA+TGG | 0.620644 | 3.1:+67300511 | None:intergenic |
CTAAGTTTGCCACACCCAGA+TGG | 0.621788 | 3.1:-67299808 | MS.gene70524:CDS |
CAATGCAAAACAATATCGCA+AGG | 0.623439 | 3.1:-67301360 | MS.gene70524:CDS |
AAAGTGCTGTTGCCTCCAGA+AGG | 0.624021 | 3.1:-67299763 | MS.gene70524:CDS |
TGAACACCATGTCCTTCTGG+AGG | 0.624619 | 3.1:+67299751 | None:intergenic |
CCAGATGCCAGTGCACCCCA+TGG | 0.626322 | 3.1:-67299245 | MS.gene70524:CDS |
AACAATCACGCCAAAGACCG+AGG | 0.628587 | 3.1:-67298814 | MS.gene70524:CDS |
AACAGGCAATTCTAGAAGAG+AGG | 0.629314 | 3.1:-67299966 | MS.gene70524:intron |
GAGCTGGCATTTCATGTGGA+AGG | 0.633380 | 3.1:+67301166 | None:intergenic |
AGAACACTTGGAGATTAACA+TGG | 0.634190 | 3.1:-67300147 | MS.gene70524:CDS |
ACTGGTTAACTTCAGACATG+TGG | 0.635346 | 3.1:-67301142 | MS.gene70524:CDS |
CATGGGGAGGTGGATACTTG+AGG | 0.637216 | 3.1:+67300529 | None:intergenic |
GTACGTTGCCTCTTCGAAGG+AGG | 0.639618 | 3.1:-67300636 | MS.gene70524:CDS |
TTCGGACAATATCCTTACGG+TGG | 0.640595 | 3.1:-67298939 | MS.gene70524:CDS |
AAACCTTGAATGACATGGGG+AGG | 0.640983 | 3.1:+67300516 | None:intergenic |
TCAACTGGAGGCCAACACTA+CGG | 0.643629 | 3.1:+67301861 | None:intergenic |
GAAGTCGTAGAGATCGGTCA+TGG | 0.645460 | 3.1:-67299071 | MS.gene70524:CDS |
TGGTGGCACTGATCAACTGG+AGG | 0.646482 | 3.1:+67301849 | None:intergenic |
GTGGAATTGGATACTTTAAG+GGG | 0.647460 | 3.1:-67301123 | MS.gene70524:CDS |
GCTCGGAGTTCATTGATCAG+TGG | 0.652807 | 3.1:-67299529 | MS.gene70524:CDS |
TACCTGCCGATCTTATCAAG+AGG | 0.656004 | 3.1:-67299411 | MS.gene70524:intron |
AGTATGACATGAATGCGTCA+TGG | 0.657704 | 3.1:+67299926 | None:intergenic |
AGATGGAACAGGAATGCGTG+AGG | 0.658885 | 3.1:-67301100 | MS.gene70524:CDS |
TATCACTGTAAGGTCAATGA+GGG | 0.659038 | 3.1:+67298791 | None:intergenic |
TTCCAAAGTCTTATGCCACT+AGG | 0.660834 | 3.1:-67299882 | MS.gene70524:CDS |
TACAAATAGGTGTCTCAGTG+TGG | 0.662678 | 3.1:-67299614 | MS.gene70524:CDS |
GAATTCATCTCAGGCCACCA+AGG | 0.669468 | 3.1:+67299032 | None:intergenic |
GCTTAACTCCTCCTTCGAAG+AGG | 0.670395 | 3.1:+67300628 | None:intergenic |
CTGTTGCCTCCAGAAGGACA+TGG | 0.671292 | 3.1:-67299757 | MS.gene70524:CDS |
AAGTTTCCCTATCCTCGTAG+GGG | 0.672039 | 3.1:-67300982 | MS.gene70524:CDS |
ACATGTCTGAAGTTAACCAG+TGG | 0.674520 | 3.1:+67301144 | None:intergenic |
AAGGGTAGTCTTCTATCACA+AGG | 0.675709 | 3.1:+67299216 | None:intergenic |
GCAAAAGATTAAGGGGACAG+TGG | 0.678101 | 3.1:-67302008 | MS.gene70524:CDS |
AGCAAACCTTGAATGACATG+GGG | 0.687046 | 3.1:+67300513 | None:intergenic |
CAGTGATAGAGATATTGTCA+AGG | 0.688559 | 3.1:-67298776 | MS.gene70524:CDS |
GTCCGAAATTGACAGCTGCG+TGG | 0.691842 | 3.1:+67298955 | None:intergenic |
ATCACAAGGCGAAGTCCATG+GGG | 0.703789 | 3.1:+67299230 | None:intergenic |
TGAACCGACCAACTATGACA+AGG | 0.714882 | 3.1:-67298908 | MS.gene70524:CDS |
TTTCCTTTACCATTGCAATG+GGG | 0.726202 | 3.1:+67300577 | None:intergenic |
CTTGTACTACAAGACAGACG+TGG | 0.730806 | 3.1:-67299132 | MS.gene70524:CDS |
ACCGACCAACTATGACAAGG+AGG | 0.766347 | 3.1:-67298905 | MS.gene70524:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAATTTTAATTATTATTTT+AGG | - | chr3.1:67298935-67298954 | MS.gene70524:CDS | 0.0% |
!!! | ATGTATAAATCTTTTTTTAA+CGG | + | chr3.1:67298821-67298840 | None:intergenic | 10.0% |
!!! | TTAATTATTATTTTAGGAAT+GGG | - | chr3.1:67298941-67298960 | MS.gene70524:CDS | 10.0% |
!!! | TTTAATTATTATTTTAGGAA+TGG | - | chr3.1:67298940-67298959 | MS.gene70524:CDS | 10.0% |
!! | AAAAAAAAAAATGTCATATG+AGG | + | chr3.1:67300303-67300322 | None:intergenic | 15.0% |
!! | AGTATAACGAAAAAATATAA+AGG | + | chr3.1:67298780-67298799 | None:intergenic | 15.0% |
!! | ATATATGTGTATTGTATTAA+AGG | - | chr3.1:67300458-67300477 | MS.gene70524:intron | 15.0% |
!!! | ATTCAATGTTTTTTTTGAAT+GGG | - | chr3.1:67299042-67299061 | MS.gene70524:CDS | 15.0% |
!! | AAAAAGAAGCAAAAGATTAA+GGG | - | chr3.1:67298542-67298561 | MS.gene70524:CDS | 20.0% |
!! | AATTTGTATTCATTTACTTG+TGG | - | chr3.1:67300569-67300588 | MS.gene70524:CDS | 20.0% |
!! | TATGATGTTTACAATGATTT+AGG | - | chr3.1:67299501-67299520 | MS.gene70524:CDS | 20.0% |
!! | TCAAAAAAATTGCGAAATTT+AGG | + | chr3.1:67299871-67299890 | None:intergenic | 20.0% |
!! | TTTGATTCCAAAGTTAAATT+TGG | + | chr3.1:67299265-67299284 | None:intergenic | 20.0% |
!!! | CATTCAATGTTTTTTTTGAA+TGG | - | chr3.1:67299041-67299060 | MS.gene70524:CDS | 20.0% |
!!! | TTTTGCTTCTTTTTGAAAAT+GGG | + | chr3.1:67298536-67298555 | None:intergenic | 20.0% |
! | AAAAGAAGCAAAAGATTAAG+GGG | - | chr3.1:67298543-67298562 | MS.gene70524:CDS | 25.0% |
! | CAAAAAGAAGCAAAAGATTA+AGG | - | chr3.1:67298541-67298560 | MS.gene70524:CDS | 25.0% |
! | GATTTGAATGATATTAAAGC+TGG | - | chr3.1:67298596-67298615 | MS.gene70524:CDS | 25.0% |
! | TACAATAACAAAAGAACACT+TGG | - | chr3.1:67300399-67300418 | MS.gene70524:CDS | 25.0% |
! | TGACACAGATTAATTAAACA+AGG | + | chr3.1:67299324-67299343 | None:intergenic | 25.0% |
!! | AAGATTATTACTGTCAGTTT+TGG | + | chr3.1:67298732-67298751 | None:intergenic | 25.0% |
!! | ACAAGTACCAAATTTAACTT+TGG | - | chr3.1:67299255-67299274 | MS.gene70524:CDS | 25.0% |
!! | CTTTTAAGCTCAAAAAAAGT+CGG | - | chr3.1:67299288-67299307 | MS.gene70524:intron | 25.0% |
!! | TTTGAATGGGATAATGATTT+TGG | - | chr3.1:67299055-67299074 | MS.gene70524:CDS | 25.0% |
!! | TTTTAAGCTCAAAAAAAGTC+GGG | - | chr3.1:67299289-67299308 | MS.gene70524:intron | 25.0% |
!! | TTTTTAATGTAAAATGCTCC+TGG | + | chr3.1:67299085-67299104 | None:intergenic | 25.0% |
!!! | ATTATTTTAGGAATGGGAAA+TGG | - | chr3.1:67298947-67298966 | MS.gene70524:CDS | 25.0% |
!!! | CTTTTGCTTCTTTTTGAAAA+TGG | + | chr3.1:67298537-67298556 | None:intergenic | 25.0% |
AATTTCGGACAATATCCTTA+CGG | - | chr3.1:67301616-67301635 | MS.gene70524:intron | 30.0% | |
ACAATATCTCTATCACTGTA+AGG | + | chr3.1:67301780-67301799 | None:intergenic | 30.0% | |
AGTCTTGCTCAATAATCATA+TGG | - | chr3.1:67301566-67301585 | MS.gene70524:CDS | 30.0% | |
ATAAAAAGCCGTTGATATGT+CGG | + | chr3.1:67298887-67298906 | None:intergenic | 30.0% | |
ATCCTATTCTTGAAAGATGA+TGG | - | chr3.1:67300702-67300721 | MS.gene70524:CDS | 30.0% | |
ATGGTGTTCAAAGAACAATT+TGG | - | chr3.1:67300820-67300839 | MS.gene70524:intron | 30.0% | |
ATGTAAGTAAAACTCGTTAG+AGG | + | chr3.1:67301256-67301275 | None:intergenic | 30.0% | |
ATGTGGAATTGGATACTTTA+AGG | - | chr3.1:67299433-67299452 | MS.gene70524:CDS | 30.0% | |
ATTTACAACTACATAAGCCT+TGG | + | chr3.1:67300853-67300872 | None:intergenic | 30.0% | |
ATTTCCTTTACCATTGCAAT+GGG | + | chr3.1:67299985-67300004 | None:intergenic | 30.0% | |
CAAATTCGATAAACATCAAG+AGG | + | chr3.1:67300555-67300574 | None:intergenic | 30.0% | |
CACCTACATTCATTAATCAA+CGG | + | chr3.1:67300329-67300348 | None:intergenic | 30.0% | |
CATTCATCATAGCTACAAAT+AGG | - | chr3.1:67300931-67300950 | MS.gene70524:intron | 30.0% | |
CCTTATTGGCAAAGAAAATT+CGG | + | chr3.1:67299225-67299244 | None:intergenic | 30.0% | |
CTATTTGTAGCTATGATGAA+TGG | + | chr3.1:67300933-67300952 | None:intergenic | 30.0% | |
CTTCTGATGAAGTTTACTTA+GGG | - | chr3.1:67301809-67301828 | MS.gene70524:intron | 30.0% | |
TACATTTCTTTGCAACTCAT+GGG | - | chr3.1:67299171-67299190 | MS.gene70524:CDS | 30.0% | |
TATTCATTTACTTGTGGAAC+AGG | - | chr3.1:67300575-67300594 | MS.gene70524:CDS | 30.0% | |
TCAAAGAACAATTTGGCAAT+TGG | - | chr3.1:67300827-67300846 | MS.gene70524:intron | 30.0% | |
TCCTATTCTTGAAAGATGAT+GGG | - | chr3.1:67300703-67300722 | MS.gene70524:CDS | 30.0% | |
TGAGTTGCAAAGAAATGTAA+TGG | + | chr3.1:67299170-67299189 | None:intergenic | 30.0% | |
TGTGGAATTGGATACTTTAA+GGG | - | chr3.1:67299434-67299453 | MS.gene70524:CDS | 30.0% | |
TTAATTAAACAAGGTGCGTT+TGG | + | chr3.1:67299315-67299334 | None:intergenic | 30.0% | |
TTACATTTCTTTGCAACTCA+TGG | - | chr3.1:67299170-67299189 | MS.gene70524:CDS | 30.0% | |
TTGTAACGTTGTTACCTTAT+TGG | + | chr3.1:67299239-67299258 | None:intergenic | 30.0% | |
! | ACTAACTAACTAACCTGTTT+TGG | + | chr3.1:67299622-67299641 | None:intergenic | 30.0% |
! | AGAAGAGAGGTTATTCATTT+TGG | - | chr3.1:67300605-67300624 | MS.gene70524:CDS | 30.0% |
! | TATCGTTTTGCTTCATTTAG+AGG | - | chr3.1:67301280-67301299 | MS.gene70524:intron | 30.0% |
! | TTCCGTTGATTAATGAATGT+AGG | - | chr3.1:67300324-67300343 | MS.gene70524:intron | 30.0% |
! | TTTTGCTTCATTTAGAGGAA+TGG | - | chr3.1:67301285-67301304 | MS.gene70524:intron | 30.0% |
!! | ATTATTACTGTCAGTTTTGG+TGG | + | chr3.1:67298729-67298748 | None:intergenic | 30.0% |
!! | TGTTGATGGATTAGAGATAT+GGG | - | chr3.1:67301369-67301388 | MS.gene70524:CDS | 30.0% |
!!! | GATAATGATTTTGGAATTCC+AGG | - | chr3.1:67299064-67299083 | MS.gene70524:CDS | 30.0% |
!!! | GTGTTCTTTTGTTATTGTAC+TGG | + | chr3.1:67300398-67300417 | None:intergenic | 30.0% |
AACCAAAGAATATGCAGAGA+TGG | - | chr3.1:67301693-67301712 | MS.gene70524:intron | 35.0% | |
AACCTTTCAATCCAAATCCA+AGG | + | chr3.1:67299831-67299850 | None:intergenic | 35.0% | |
AAGGAGGTTAATTCCTGAAA+AGG | - | chr3.1:67301669-67301688 | MS.gene70524:intron | 35.0% | |
ACTTGGAGATTAACATGGAT+GGG | - | chr3.1:67300416-67300435 | MS.gene70524:intron | 35.0% | |
AGAACACTTGGAGATTAACA+TGG | - | chr3.1:67300411-67300430 | MS.gene70524:intron | 35.0% | |
AGAGATATGGGATGCTATTA+AGG | - | chr3.1:67301381-67301400 | MS.gene70524:CDS | 35.0% | |
AGGAGGTTAATTCCTGAAAA+GGG | - | chr3.1:67301670-67301689 | MS.gene70524:intron | 35.0% | |
ATCACAAAAATAAGCCTTGG+TGG | - | chr3.1:67301512-67301531 | MS.gene70524:CDS | 35.0% | |
ATTAACCTCCTTGTCATAGT+TGG | + | chr3.1:67301661-67301680 | None:intergenic | 35.0% | |
CAAAAGGTTTGCAAAGAAGA+TGG | - | chr3.1:67301882-67301901 | MS.gene70524:CDS | 35.0% | |
CAATGCAAAACAATATCGCA+AGG | - | chr3.1:67299198-67299217 | MS.gene70524:CDS | 35.0% | |
CAGTGATAGAGATATTGTCA+AGG | - | chr3.1:67301782-67301801 | MS.gene70524:intron | 35.0% | |
CTAATCCATCAACAGCAAAA+GGG | + | chr3.1:67301363-67301382 | None:intergenic | 35.0% | |
CTTCAAGAGTTAAACTCACA+AGG | + | chr3.1:67299129-67299148 | None:intergenic | 35.0% | |
GAAGGTAAAAGCAAAGTGTA+GGG | + | chr3.1:67301982-67302001 | None:intergenic | 35.0% | |
GATTTCCTTTACCATTGCAA+TGG | + | chr3.1:67299986-67300005 | None:intergenic | 35.0% | |
GCTTCTGATGAAGTTTACTT+AGG | - | chr3.1:67301808-67301827 | MS.gene70524:intron | 35.0% | |
GGAAAAGAGAGAATGATGAA+TGG | - | chr3.1:67301830-67301849 | MS.gene70524:intron | 35.0% | |
GGTTGTAGAAGCTTATGAAT+AGG | + | chr3.1:67300975-67300994 | None:intergenic | 35.0% | |
GTGATCACAAAAATAAGCCT+TGG | - | chr3.1:67301509-67301528 | MS.gene70524:CDS | 35.0% | |
GTGGAATTGGATACTTTAAG+GGG | - | chr3.1:67299435-67299454 | MS.gene70524:CDS | 35.0% | |
GTTTGATCTCCATAGACATT+GGG | + | chr3.1:67300376-67300395 | None:intergenic | 35.0% | |
TAAAAAGCCGTTGATATGTC+GGG | + | chr3.1:67298886-67298905 | None:intergenic | 35.0% | |
TAACTTCAGACATGTGGAAT+TGG | - | chr3.1:67299422-67299441 | MS.gene70524:CDS | 35.0% | |
TAGCAAACCTTGAATGACAT+GGG | + | chr3.1:67300049-67300068 | None:intergenic | 35.0% | |
TATCACTGTAAGGTCAATGA+GGG | + | chr3.1:67301770-67301789 | None:intergenic | 35.0% | |
TCCCATCATCTTTCAAGAAT+AGG | + | chr3.1:67300707-67300726 | None:intergenic | 35.0% | |
TCTAATCCATCAACAGCAAA+AGG | + | chr3.1:67301364-67301383 | None:intergenic | 35.0% | |
TGAAGTCTTTGAATCACACA+TGG | + | chr3.1:67300224-67300243 | None:intergenic | 35.0% | |
TGCTAACCTCTTGATAAGAT+CGG | + | chr3.1:67301156-67301175 | None:intergenic | 35.0% | |
TTAACTCTTGAAGACATACC+TGG | - | chr3.1:67299136-67299155 | MS.gene70524:CDS | 35.0% | |
TTAGCAAACCTTGAATGACA+TGG | + | chr3.1:67300050-67300069 | None:intergenic | 35.0% | |
TTCAAGATTAAACCACCGTA+AGG | + | chr3.1:67301634-67301653 | None:intergenic | 35.0% | |
TTCCTTGGATTTGGATTGAA+AGG | - | chr3.1:67299826-67299845 | MS.gene70524:CDS | 35.0% | |
TTCTGCAGTTTACAAGGATT+GGG | - | chr3.1:67301106-67301125 | MS.gene70524:CDS | 35.0% | |
TTGTTCTCAAATAAGCCCTT+TGG | + | chr3.1:67301729-67301748 | None:intergenic | 35.0% | |
TTTCCTTTACCATTGCAATG+GGG | + | chr3.1:67299984-67300003 | None:intergenic | 35.0% | |
! | AATGTAATGGAATCATGACC+AGG | + | chr3.1:67299157-67299176 | None:intergenic | 35.0% |
! | CCGAATTTTCTTTGCCAATA+AGG | - | chr3.1:67299222-67299241 | MS.gene70524:CDS | 35.0% |
! | CTTCTTTGCAAACCTTTTGA+AGG | + | chr3.1:67301881-67301900 | None:intergenic | 35.0% |
! | GGAAATTTTCACCATCAGTT+CGG | + | chr3.1:67300011-67300030 | None:intergenic | 35.0% |
!! | ATAGCACTGATGATATCTGT+AGG | + | chr3.1:67299958-67299977 | None:intergenic | 35.0% |
!! | CTGTTGATGGATTAGAGATA+TGG | - | chr3.1:67301368-67301387 | MS.gene70524:CDS | 35.0% |
!! | TATTCTTTGGTTCCCTTTTC+AGG | + | chr3.1:67301685-67301704 | None:intergenic | 35.0% |
!! | TGATGGGACTTTAAAACCAT+TGG | - | chr3.1:67300719-67300738 | MS.gene70524:CDS | 35.0% |
!! | TGTTCCATTTTTACCAACCT+TGG | - | chr3.1:67299003-67299022 | MS.gene70524:CDS | 35.0% |
!!! | ACTAACTAACCTGTTTTGGT+AGG | + | chr3.1:67299618-67299637 | None:intergenic | 35.0% |
AAACTTAGTTCGATGGCCAA+TGG | + | chr3.1:67300738-67300757 | None:intergenic | 40.0% | |
AACAATTTGGCAATTGGCCA+AGG | - | chr3.1:67300833-67300852 | MS.gene70524:intron | 40.0% | |
AAGCTAGATCCCAATGTCTA+TGG | - | chr3.1:67300364-67300383 | MS.gene70524:CDS | 40.0% | |
AAGGAAATCTTCCGAACTGA+TGG | - | chr3.1:67299997-67300016 | MS.gene70524:intron | 40.0% | |
AAGGGTAGTCTTCTATCACA+AGG | + | chr3.1:67301345-67301364 | None:intergenic | 40.0% | |
ACATAGTTAGTATCAGCTGC+TGG | + | chr3.1:67299766-67299785 | None:intergenic | 40.0% | |
ACTGGTTAACTTCAGACATG+TGG | - | chr3.1:67299416-67299435 | MS.gene70524:CDS | 40.0% | |
AGATGGAGAAAGATGACCAA+AGG | - | chr3.1:67301710-67301729 | MS.gene70524:intron | 40.0% | |
AGCAAACCTTGAATGACATG+GGG | + | chr3.1:67300048-67300067 | None:intergenic | 40.0% | |
AGTATGACATGAATGCGTCA+TGG | + | chr3.1:67300635-67300654 | None:intergenic | 40.0% | |
ATGGGATGCTATTAAGGCAT+GGG | - | chr3.1:67301387-67301406 | MS.gene70524:CDS | 40.0% | |
CAAGAATAGGATTGTCCTAG+TGG | + | chr3.1:67300694-67300713 | None:intergenic | 40.0% | |
CACTTGGAGATTAACATGGA+TGG | - | chr3.1:67300415-67300434 | MS.gene70524:intron | 40.0% | |
CGACTTCTTTCCAAAACTCT+TGG | + | chr3.1:67301474-67301493 | None:intergenic | 40.0% | |
CTATCACTGTAAGGTCAATG+AGG | + | chr3.1:67301771-67301790 | None:intergenic | 40.0% | |
CTCCATCTCTGCATATTCTT+TGG | + | chr3.1:67301698-67301717 | None:intergenic | 40.0% | |
CTTCTGCAGTTTACAAGGAT+TGG | - | chr3.1:67301105-67301124 | MS.gene70524:CDS | 40.0% | |
GACCAAACACTTCATCTCTT+GGG | + | chr3.1:67299789-67299808 | None:intergenic | 40.0% | |
GATGGAGAAAGATGACCAAA+GGG | - | chr3.1:67301711-67301730 | MS.gene70524:intron | 40.0% | |
GATGTCTTCTGCAGTTTACA+AGG | - | chr3.1:67301100-67301119 | MS.gene70524:CDS | 40.0% | |
GGAAGGTAAAAGCAAAGTGT+AGG | + | chr3.1:67301983-67302002 | None:intergenic | 40.0% | |
GGTTTGATCTCCATAGACAT+TGG | + | chr3.1:67300377-67300396 | None:intergenic | 40.0% | |
GTTGATGTGCAAGAATGCAT+TGG | - | chr3.1:67298574-67298593 | MS.gene70524:CDS | 40.0% | |
TACAAATAGGTGTCTCAGTG+TGG | - | chr3.1:67300944-67300963 | MS.gene70524:intron | 40.0% | |
TATGGGATGCTATTAAGGCA+TGG | - | chr3.1:67301386-67301405 | MS.gene70524:CDS | 40.0% | |
TCGTCAATCGAATTCATCTC+AGG | + | chr3.1:67301538-67301557 | None:intergenic | 40.0% | |
TGAACATCAATGCACTTGCT+CGG | - | chr3.1:67301012-67301031 | MS.gene70524:CDS | 40.0% | |
TGAATGGACAGCTGATGAAA+AGG | - | chr3.1:67301846-67301865 | MS.gene70524:CDS | 40.0% | |
TGACCAAACACTTCATCTCT+TGG | + | chr3.1:67299790-67299809 | None:intergenic | 40.0% | |
TGGAAAGAAGTCGTAGAGAT+CGG | - | chr3.1:67301481-67301500 | MS.gene70524:CDS | 40.0% | |
TGTTGGAGATCAGTTCTTTC+TGG | - | chr3.1:67298973-67298992 | MS.gene70524:CDS | 40.0% | |
TTACAGCTGATAAGTCTGCA+TGG | - | chr3.1:67300153-67300172 | MS.gene70524:CDS | 40.0% | |
TTGGAAGAACCTCCAAGAAT+TGG | + | chr3.1:67299558-67299577 | None:intergenic | 40.0% | |
TTTGCAAGAGAAATGCTTGC+TGG | - | chr3.1:67300191-67300210 | MS.gene70524:CDS | 40.0% | |
! | AAAGTGTAGGGCATCTTAAC+CGG | + | chr3.1:67301970-67301989 | None:intergenic | 40.0% |
! | AACAGGCAATTCTAGAAGAG+AGG | - | chr3.1:67300592-67300611 | MS.gene70524:CDS | 40.0% |
! | ACATGTCTGAAGTTAACCAG+TGG | + | chr3.1:67299417-67299436 | None:intergenic | 40.0% |
! | CGGCTTTTTATTGTTACGCA+AGG | - | chr3.1:67298896-67298915 | MS.gene70524:CDS | 40.0% |
! | GGAATGGGAAATGGATTTGT+TGG | - | chr3.1:67298956-67298975 | MS.gene70524:CDS | 40.0% |
! | TTCCAAAGTCTTATGCCACT+AGG | - | chr3.1:67300676-67300695 | MS.gene70524:CDS | 40.0% |
! | TTGGATACTTTAAGGGGAGA+TGG | - | chr3.1:67299441-67299460 | MS.gene70524:CDS | 40.0% |
!! | ACTTTGCTTTTACCTTCCAG+TGG | - | chr3.1:67301985-67302004 | MS.gene70524:CDS | 40.0% |
!! | ATTGGGATCTAGCTTGCTTT+GGG | + | chr3.1:67300359-67300378 | None:intergenic | 40.0% |
!! | GTGGCATAAGACTTTGGAAT+AGG | + | chr3.1:67300675-67300694 | None:intergenic | 40.0% |
!! | GTTGTTGGTGGTGTTATTGA+TGG | - | chr3.1:67298656-67298675 | MS.gene70524:CDS | 40.0% |
!!! | TGTTTTGGTAGGTTTTCTGC+CGG | + | chr3.1:67299607-67299626 | None:intergenic | 40.0% |
AAACCTTGAATGACATGGGG+AGG | + | chr3.1:67300045-67300064 | None:intergenic | 45.0% | |
AACAGGAATGCGTGAGGAAT+GGG | - | chr3.1:67299464-67299483 | MS.gene70524:CDS | 45.0% | |
AACCTCTTGATAAGATCGGC+AGG | + | chr3.1:67301152-67301171 | None:intergenic | 45.0% | |
AAGTTTCCCTATCCTCGTAG+GGG | - | chr3.1:67299576-67299595 | MS.gene70524:CDS | 45.0% | |
ACCTCCTTGTCATAGTTGGT+CGG | + | chr3.1:67301657-67301676 | None:intergenic | 45.0% | |
AGGCAAGAGTAGCCTTCAAA+AGG | - | chr3.1:67301866-67301885 | MS.gene70524:CDS | 45.0% | |
AGTTCATTGATCAGTGGAGG+TGG | - | chr3.1:67301035-67301054 | MS.gene70524:CDS | 45.0% | |
ATTAAAGCTGGCCCTTCACT+TGG | - | chr3.1:67298608-67298627 | MS.gene70524:CDS | 45.0% | |
CAAATCCTGCTCCAAGTGAA+GGG | + | chr3.1:67298622-67298641 | None:intergenic | 45.0% | |
CAAGTTTCCCTATCCTCGTA+GGG | - | chr3.1:67299575-67299594 | MS.gene70524:CDS | 45.0% | |
CACCAACAACGTCTCTAACA+AGG | + | chr3.1:67298646-67298665 | None:intergenic | 45.0% | |
CCAGTTCGGTTAAGCAAATC+TGG | + | chr3.1:67301946-67301965 | None:intergenic | 45.0% | |
CTCAGATCCCGACATATCAA+CGG | - | chr3.1:67298876-67298895 | MS.gene70524:CDS | 45.0% | |
CTCCATATTGTTCGCCATCT+GGG | + | chr3.1:67300767-67300786 | None:intergenic | 45.0% | |
CTTGTACTACAAGACAGACG+TGG | - | chr3.1:67301426-67301445 | MS.gene70524:CDS | 45.0% | |
CTTGTTAGAGACGTTGTTGG+TGG | - | chr3.1:67298644-67298663 | MS.gene70524:CDS | 45.0% | |
CTTTGAACACCATGTCCTTC+TGG | + | chr3.1:67300813-67300832 | None:intergenic | 45.0% | |
GAAGACATCTCAACAGCGTA+CGG | + | chr3.1:67301089-67301108 | None:intergenic | 45.0% | |
GAATGGCTCAATCACGCAAT+GGG | + | chr3.1:67300916-67300935 | None:intergenic | 45.0% | |
GATGAATTCGATTGACGAGC+TGG | - | chr3.1:67301540-67301559 | MS.gene70524:CDS | 45.0% | |
GCAAAAGATTAAGGGGACAG+TGG | - | chr3.1:67298550-67298569 | MS.gene70524:CDS | 45.0% | |
GGCAGAAAACCTACCAAAAC+AGG | - | chr3.1:67299606-67299625 | MS.gene70524:CDS | 45.0% | |
GGCATTTCATGTGGAAGGTA+TGG | + | chr3.1:67299390-67299409 | None:intergenic | 45.0% | |
GTCCTAGTGGCATAAGACTT+TGG | + | chr3.1:67300681-67300700 | None:intergenic | 45.0% | |
GTGTGGCAAACTTAGTTCGA+TGG | + | chr3.1:67300745-67300764 | None:intergenic | 45.0% | |
TACCTGCCGATCTTATCAAG+AGG | - | chr3.1:67301147-67301166 | MS.gene70524:CDS | 45.0% | |
TAGCCCCATTGCAATGGTAA+AGG | - | chr3.1:67299978-67299997 | MS.gene70524:intron | 45.0% | |
TATCACAAGGCGAAGTCCAT+GGG | + | chr3.1:67301332-67301351 | None:intergenic | 45.0% | |
TCAACCAGTGACTCATGAGT+TGG | + | chr3.1:67300890-67300909 | None:intergenic | 45.0% | |
TGAACCGACCAACTATGACA+AGG | - | chr3.1:67301650-67301669 | MS.gene70524:intron | 45.0% | |
TGAATGGCTCAATCACGCAA+TGG | + | chr3.1:67300917-67300936 | None:intergenic | 45.0% | |
TGCTATTAGCCCCATTGCAA+TGG | - | chr3.1:67299972-67299991 | MS.gene70524:intron | 45.0% | |
TTCACCAACTCATGAGTCAC+TGG | - | chr3.1:67300883-67300902 | MS.gene70524:intron | 45.0% | |
TTCATTGTGTCGCGATAGTG+AGG | + | chr3.1:67300996-67301015 | None:intergenic | 45.0% | |
TTCCAAAACTCTTGGAGCTC+TGG | + | chr3.1:67301466-67301485 | None:intergenic | 45.0% | |
TTCCACGCAGCTGTCAATTT+CGG | - | chr3.1:67301601-67301620 | MS.gene70524:CDS | 45.0% | |
TTCGGACAATATCCTTACGG+TGG | - | chr3.1:67301619-67301638 | MS.gene70524:intron | 45.0% | |
! | AAGTGTAGGGCATCTTAACC+GGG | + | chr3.1:67301969-67301988 | None:intergenic | 45.0% |
! | ACTTTAAGGGGAGATGGAAC+AGG | - | chr3.1:67299447-67299466 | MS.gene70524:CDS | 45.0% |
! | ATAGAGCAGGCATTTTTGCC+AGG | - | chr3.1:67301062-67301081 | MS.gene70524:CDS | 45.0% |
! | ATCCAGAGCTCCAAGAGTTT+TGG | - | chr3.1:67301461-67301480 | MS.gene70524:CDS | 45.0% |
! | CAAGCTGACTTCCTTGGATT+TGG | - | chr3.1:67299817-67299836 | MS.gene70524:CDS | 45.0% |
! | CCAGATTTGCTTAACCGAAC+TGG | - | chr3.1:67301943-67301962 | MS.gene70524:CDS | 45.0% |
! | CTTTTACCTTCCAGTGGAGA+AGG | - | chr3.1:67301991-67302010 | MS.gene70524:CDS | 45.0% |
! | GTCCCAAGAGATGAAGTGTT+TGG | - | chr3.1:67299784-67299803 | MS.gene70524:CDS | 45.0% |
! | TTGAAGCAAGCTGACTTCCT+TGG | - | chr3.1:67299811-67299830 | MS.gene70524:CDS | 45.0% |
!! | ACTCATGAGTTGGTGAAAGC+AGG | + | chr3.1:67300880-67300899 | None:intergenic | 45.0% |
!! | CATTGGGATCTAGCTTGCTT+TGG | + | chr3.1:67300360-67300379 | None:intergenic | 45.0% |
!! | GAGCTCTGGATCTCTTTGAA+TGG | + | chr3.1:67301452-67301471 | None:intergenic | 45.0% |
!! | GATGGTGCTACTGCTATCTT+AGG | - | chr3.1:67298674-67298693 | MS.gene70524:CDS | 45.0% |
!! | GCTGCCAAGGTTGGTAAAAA+TGG | + | chr3.1:67299010-67299029 | None:intergenic | 45.0% |
!! | TTGGGATCTAGCTTGCTTTG+GGG | + | chr3.1:67300358-67300377 | None:intergenic | 45.0% |
!!! | GACTACCCTTTTGCTGTTGA+TGG | - | chr3.1:67301355-67301374 | MS.gene70524:CDS | 45.0% |
!!! | TTTTGGTGGCACTGATCAAC+TGG | + | chr3.1:67298715-67298734 | None:intergenic | 45.0% |
AACAATCACGCCAAAGACCG+AGG | - | chr3.1:67301744-67301763 | MS.gene70524:intron | 50.0% | |
ACATGAAATGCCAGCTCCAC+TGG | - | chr3.1:67299398-67299417 | MS.gene70524:intron | 50.0% | |
ACCGACCAACTATGACAAGG+AGG | - | chr3.1:67301653-67301672 | MS.gene70524:intron | 50.0% | |
AGATGGAACAGGAATGCGTG+AGG | - | chr3.1:67299458-67299477 | MS.gene70524:CDS | 50.0% | |
AGTGGAGCTGGCATTTCATG+TGG | + | chr3.1:67299399-67299418 | None:intergenic | 50.0% | |
ATCACAAGGCGAAGTCCATG+GGG | + | chr3.1:67301331-67301350 | None:intergenic | 50.0% | |
CACCCAGATGGCGAACAATA+TGG | - | chr3.1:67300762-67300781 | MS.gene70524:CDS | 50.0% | |
CCAAATCCTGCTCCAAGTGA+AGG | + | chr3.1:67298623-67298642 | None:intergenic | 50.0% | |
CCAAGTTTCCCTATCCTCGT+AGG | - | chr3.1:67299574-67299593 | MS.gene70524:CDS | 50.0% | |
CCTACGAGGATAGGGAAACT+TGG | + | chr3.1:67299577-67299596 | None:intergenic | 50.0% | |
CCTTCACTTGGAGCAGGATT+TGG | - | chr3.1:67298620-67298639 | MS.gene70524:CDS | 50.0% | |
CGGAGTTCATTGATCAGTGG+AGG | - | chr3.1:67301032-67301051 | MS.gene70524:CDS | 50.0% | |
CTAAGTTTGCCACACCCAGA+TGG | - | chr3.1:67300750-67300769 | MS.gene70524:CDS | 50.0% | |
CTATCACAAGGCGAAGTCCA+TGG | + | chr3.1:67301333-67301352 | None:intergenic | 50.0% | |
CTCCAAGAATTGGACGAGCA+AGG | + | chr3.1:67299548-67299567 | None:intergenic | 50.0% | |
CTGAAGTTAACCAGTGGAGC+TGG | + | chr3.1:67299411-67299430 | None:intergenic | 50.0% | |
CTTGCTCGTCCAATTCTTGG+AGG | - | chr3.1:67299546-67299565 | MS.gene70524:CDS | 50.0% | |
GAACAGGAATGCGTGAGGAA+TGG | - | chr3.1:67299463-67299482 | MS.gene70524:CDS | 50.0% | |
GAAGTACGTTGCCTCTTCGA+AGG | - | chr3.1:67299919-67299938 | MS.gene70524:CDS | 50.0% | |
GAAGTCGTAGAGATCGGTCA+TGG | - | chr3.1:67301487-67301506 | MS.gene70524:CDS | 50.0% | |
GAATTCATCTCAGGCCACCA+AGG | + | chr3.1:67301529-67301548 | None:intergenic | 50.0% | |
GAATTCGATTGACGAGCTGG+TGG | - | chr3.1:67301543-67301562 | MS.gene70524:CDS | 50.0% | |
GACCTTGCTCGTCCAATTCT+TGG | - | chr3.1:67299543-67299562 | MS.gene70524:CDS | 50.0% | |
GAGCTGGCATTTCATGTGGA+AGG | + | chr3.1:67299395-67299414 | None:intergenic | 50.0% | |
GCAAGGTCTCGACTCTTATC+TGG | + | chr3.1:67299531-67299550 | None:intergenic | 50.0% | |
GCTATCTTAGGCCGTAGTGT+TGG | - | chr3.1:67298686-67298705 | MS.gene70524:CDS | 50.0% | |
GCTCCATATTGTTCGCCATC+TGG | + | chr3.1:67300768-67300787 | None:intergenic | 50.0% | |
GCTCGGAGTTCATTGATCAG+TGG | - | chr3.1:67301029-67301048 | MS.gene70524:CDS | 50.0% | |
GCTTAACTCCTCCTTCGAAG+AGG | + | chr3.1:67299933-67299952 | None:intergenic | 50.0% | |
GTTCTTCCCCTACGAGGATA+GGG | + | chr3.1:67299585-67299604 | None:intergenic | 50.0% | |
TAAGATCGGCAGGTAGTGCT+TGG | + | chr3.1:67301142-67301161 | None:intergenic | 50.0% | |
TATCCTCGTAGGGGAAGAAC+CGG | - | chr3.1:67299585-67299604 | MS.gene70524:CDS | 50.0% | |
TATTGTTCGCCATCTGGGTG+TGG | + | chr3.1:67300762-67300781 | None:intergenic | 50.0% | |
TCAACTGGAGGCCAACACTA+CGG | + | chr3.1:67298700-67298719 | None:intergenic | 50.0% | |
TGAACACCATGTCCTTCTGG+AGG | + | chr3.1:67300810-67300829 | None:intergenic | 50.0% | |
TGGAGGTGGCATTATAGAGC+AGG | - | chr3.1:67301049-67301068 | MS.gene70524:CDS | 50.0% | |
TGTAAGGTCAATGAGGGCCT+CGG | + | chr3.1:67301764-67301783 | None:intergenic | 50.0% | |
TTTGCTTAACCGAACTGGCC+CGG | - | chr3.1:67301948-67301967 | MS.gene70524:CDS | 50.0% | |
! | GGATGGGCTCACAGTAGAAA+AGG | - | chr3.1:67300432-67300451 | MS.gene70524:intron | 50.0% |
!! | AAAGTGCTGTTGCCTCCAGA+AGG | - | chr3.1:67300795-67300814 | MS.gene70524:CDS | 50.0% |
!! | GGCCTTGTTAGAGACGTTGT+TGG | - | chr3.1:67298641-67298660 | MS.gene70524:CDS | 50.0% |
ACCAACCTTGGCAGCAAGAC+AGG | - | chr3.1:67299015-67299034 | MS.gene70524:CDS | 55.0% | |
ATCGGCAGGTAGTGCTTGGT+CGG | + | chr3.1:67301138-67301157 | None:intergenic | 55.0% | |
ATCTCAACAGCGTACGGTCC+TGG | + | chr3.1:67301083-67301102 | None:intergenic | 55.0% | |
CATGGGGAGGTGGATACTTG+AGG | + | chr3.1:67300032-67300051 | None:intergenic | 55.0% | |
CCACCTCCCCATGTCATTCA+AGG | - | chr3.1:67300039-67300058 | MS.gene70524:intron | 55.0% | |
CCTTGAATGACATGGGGAGG+TGG | + | chr3.1:67300042-67300061 | None:intergenic | 55.0% | |
CTGTTGCCTCCAGAAGGACA+TGG | - | chr3.1:67300801-67300820 | MS.gene70524:CDS | 55.0% | |
GCAAGTCAAGCCTTCTCCAC+TGG | + | chr3.1:67302004-67302023 | None:intergenic | 55.0% | |
GCATCTTAACCGGGCCAGTT+CGG | + | chr3.1:67301960-67301979 | None:intergenic | 55.0% | |
GGTTCTTCCCCTACGAGGAT+AGG | + | chr3.1:67299586-67299605 | None:intergenic | 55.0% | |
GTACGTTGCCTCTTCGAAGG+AGG | - | chr3.1:67299922-67299941 | MS.gene70524:CDS | 55.0% | |
GTCAAGCCTTCTCCACTGGA+AGG | + | chr3.1:67302000-67302019 | None:intergenic | 55.0% | |
GTCCGAAATTGACAGCTGCG+TGG | + | chr3.1:67301606-67301625 | None:intergenic | 55.0% | |
TCAATGAGGGCCTCGGTCTT+TGG | + | chr3.1:67301757-67301776 | None:intergenic | 55.0% | |
TCCTGTCTTGCTGCCAAGGT+TGG | + | chr3.1:67299019-67299038 | None:intergenic | 55.0% | |
TGCATCCTGTCTTGCTGCCA+AGG | + | chr3.1:67299023-67299042 | None:intergenic | 55.0% | |
!! | GGAGAAGGCTTGACTTGCAG+AGG | - | chr3.1:67302006-67302025 | MS.gene70524:CDS | 55.0% |
!! | GGATCTAGCTTGCTTTGGGG+TGG | + | chr3.1:67300355-67300374 | None:intergenic | 55.0% |
!! | TGGTGGCACTGATCAACTGG+AGG | + | chr3.1:67298712-67298731 | None:intergenic | 55.0% |
TCGGCAGGTAGTGCTTGGTC+GGG | + | chr3.1:67301137-67301156 | None:intergenic | 60.0% | |
CCAGATGCCAGTGCACCCCA+TGG | - | chr3.1:67301313-67301332 | MS.gene70524:intron | 65.0% | |
CGGCAGGTAGTGCTTGGTCG+GGG | + | chr3.1:67301136-67301155 | None:intergenic | 65.0% | |
GCGAAGTCCATGGGGTGCAC+TGG | + | chr3.1:67301323-67301342 | None:intergenic | 65.0% | |
GCTGGCCCTTCACTTGGAGC+AGG | - | chr3.1:67298614-67298633 | MS.gene70524:CDS | 65.0% | |
! | CCATGGGGTGCACTGGCATC+TGG | + | chr3.1:67301316-67301335 | None:intergenic | 65.0% |
!! | CTGCCGGTTCTTCCCCTACG+AGG | + | chr3.1:67299591-67299610 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 67298527 | 67302053 | 67298527 | ID=MS.gene70524 |
chr3.1 | mRNA | 67298527 | 67302053 | 67298527 | ID=MS.gene70524.t1;Parent=MS.gene70524 |
chr3.1 | exon | 67301840 | 67302053 | 67301840 | ID=MS.gene70524.t1.exon1;Parent=MS.gene70524.t1 |
chr3.1 | CDS | 67301840 | 67302053 | 67301840 | ID=cds.MS.gene70524.t1;Parent=MS.gene70524.t1 |
chr3.1 | exon | 67301337 | 67301623 | 67301337 | ID=MS.gene70524.t1.exon2;Parent=MS.gene70524.t1 |
chr3.1 | CDS | 67301337 | 67301623 | 67301337 | ID=cds.MS.gene70524.t1;Parent=MS.gene70524.t1 |
chr3.1 | exon | 67300953 | 67301193 | 67300953 | ID=MS.gene70524.t1.exon3;Parent=MS.gene70524.t1 |
chr3.1 | CDS | 67300953 | 67301193 | 67300953 | ID=cds.MS.gene70524.t1;Parent=MS.gene70524.t1 |
chr3.1 | exon | 67300520 | 67300834 | 67300520 | ID=MS.gene70524.t1.exon4;Parent=MS.gene70524.t1 |
chr3.1 | CDS | 67300520 | 67300834 | 67300520 | ID=cds.MS.gene70524.t1;Parent=MS.gene70524.t1 |
chr3.1 | exon | 67300336 | 67300421 | 67300336 | ID=MS.gene70524.t1.exon5;Parent=MS.gene70524.t1 |
chr3.1 | CDS | 67300336 | 67300421 | 67300336 | ID=cds.MS.gene70524.t1;Parent=MS.gene70524.t1 |
chr3.1 | exon | 67300127 | 67300234 | 67300127 | ID=MS.gene70524.t1.exon6;Parent=MS.gene70524.t1 |
chr3.1 | CDS | 67300127 | 67300234 | 67300127 | ID=cds.MS.gene70524.t1;Parent=MS.gene70524.t1 |
chr3.1 | exon | 67299412 | 67299983 | 67299412 | ID=MS.gene70524.t1.exon7;Parent=MS.gene70524.t1 |
chr3.1 | CDS | 67299412 | 67299983 | 67299412 | ID=cds.MS.gene70524.t1;Parent=MS.gene70524.t1 |
chr3.1 | exon | 67298527 | 67299280 | 67298527 | ID=MS.gene70524.t1.exon8;Parent=MS.gene70524.t1 |
chr3.1 | CDS | 67298527 | 67299280 | 67298527 | ID=cds.MS.gene70524.t1;Parent=MS.gene70524.t1 |
Gene Sequence |
Protein sequence |