Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70658.t1 | XP_003601211.1 | 97.1 | 382 | 11 | 0 | 1 | 382 | 1 | 382 | 1.40E-214 | 755.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70658.t1 | Q94A02 | 57.6 | 399 | 159 | 5 | 1 | 396 | 1 | 392 | 6.7e-125 | 448.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70658.t1 | G7J4U4 | 97.1 | 382 | 11 | 0 | 1 | 382 | 1 | 382 | 1.0e-214 | 755.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057669 | MS.gene70658 | 0.816211 | 6.22E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70658.t1 | MTR_3g077250 | 97.120 | 382 | 11 | 0 | 1 | 382 | 1 | 382 | 0.0 | 780 |
| MS.gene70658.t1 | MTR_4g105220 | 71.018 | 383 | 101 | 5 | 1 | 380 | 2 | 377 | 0.0 | 546 |
| MS.gene70658.t1 | MTR_5g033510 | 52.104 | 309 | 146 | 2 | 73 | 379 | 30 | 338 | 9.62e-118 | 348 |
| MS.gene70658.t1 | MTR_5g033520 | 48.544 | 309 | 155 | 4 | 66 | 370 | 15 | 323 | 4.10e-107 | 321 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70658.t1 | AT4G24670 | 57.644 | 399 | 159 | 5 | 1 | 396 | 1 | 392 | 8.05e-161 | 459 |
| MS.gene70658.t1 | AT4G24670 | 57.644 | 399 | 159 | 5 | 1 | 396 | 1 | 392 | 8.05e-161 | 459 |
| MS.gene70658.t1 | AT1G70560 | 56.721 | 305 | 127 | 2 | 79 | 380 | 24 | 326 | 4.71e-131 | 382 |
| MS.gene70658.t1 | AT1G23320 | 54.098 | 305 | 135 | 2 | 77 | 380 | 23 | 323 | 1.20e-122 | 360 |
| MS.gene70658.t1 | AT1G34040 | 39.216 | 306 | 171 | 3 | 80 | 379 | 90 | 386 | 2.02e-76 | 242 |
| MS.gene70658.t1 | AT1G34040 | 39.216 | 306 | 171 | 3 | 80 | 379 | 90 | 386 | 1.02e-75 | 243 |
| MS.gene70658.t1 | AT1G34060 | 33.503 | 394 | 222 | 7 | 14 | 379 | 7 | 388 | 2.26e-75 | 242 |
| MS.gene70658.t1 | AT1G34060 | 37.671 | 292 | 164 | 4 | 96 | 379 | 2 | 283 | 2.47e-70 | 226 |
Find 78 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACAGTATATGAAAGATTT+TGG | 0.156498 | 3.1:-63556629 | MS.gene70658:CDS |
| ACATGTCCATCAGGATTATT+TGG | 0.199142 | 3.1:+63555227 | None:intergenic |
| TCTTAGCTGCTTCCATCTAT+TGG | 0.244795 | 3.1:+63554224 | None:intergenic |
| TCCAGCATGACCAGTGCTTT+TGG | 0.265293 | 3.1:+63555085 | None:intergenic |
| TTCATGATCTTGCCTATTAC+TGG | 0.286944 | 3.1:-63555166 | MS.gene70658:CDS |
| TCTACTTGCAAAGATCTTAC+AGG | 0.306436 | 3.1:-63560191 | MS.gene70658:CDS |
| ATTTGTATAGCCCAGACTTT+AGG | 0.319669 | 3.1:+63555309 | None:intergenic |
| CAATAGAAGTCAGGGACTTC+TGG | 0.326416 | 3.1:-63555189 | MS.gene70658:CDS |
| AGTATATTGTGGCCAGTAAT+AGG | 0.326509 | 3.1:+63555154 | None:intergenic |
| TATCAATTGACAAATTTGAT+AGG | 0.341131 | 3.1:-63554077 | MS.gene70658:intron |
| ATTGGTTGAGATGCATGATT+TGG | 0.341642 | 3.1:+63556387 | None:intergenic |
| GGAGGTACTGACAGAGTAGT+AGG | 0.352359 | 3.1:+63556344 | None:intergenic |
| TTTAGGTAATCTGTCATTGA+TGG | 0.369661 | 3.1:+63555326 | None:intergenic |
| AGAATTCTTCAAAGAAGAAA+TGG | 0.385093 | 3.1:+63560211 | None:intergenic |
| CTCAAGGAGAATACAGTATT+GGG | 0.389922 | 3.1:+63560377 | None:intergenic |
| GACTTTCTCACATGTCCATC+AGG | 0.393495 | 3.1:+63555218 | None:intergenic |
| TTGGTTGAGATGCATGATTT+GGG | 0.397818 | 3.1:+63556388 | None:intergenic |
| ATGACAGATTACCTAAAGTC+TGG | 0.404682 | 3.1:-63555320 | MS.gene70658:CDS |
| TAAAGTCTGGGCTATACAAA+TGG | 0.411747 | 3.1:-63555307 | MS.gene70658:CDS |
| TATTCAAAGAAGAGTTGTTA+TGG | 0.416049 | 3.1:+63560282 | None:intergenic |
| GTCTAAGGTCAATAGAAGTC+AGG | 0.421528 | 3.1:-63555198 | MS.gene70658:CDS |
| TGATCAGCAGGCGATGATAT+AGG | 0.422754 | 3.1:+63555131 | None:intergenic |
| GAGGCACAGACAACGTTGAT+TGG | 0.426113 | 3.1:+63556369 | None:intergenic |
| ACAATGTCATGGCCAATAGA+TGG | 0.426613 | 3.1:-63554236 | MS.gene70658:CDS |
| TAGCTCATGGATTGCCATCC+TGG | 0.433889 | 3.1:+63556573 | None:intergenic |
| TCCAAAAGCACTGGTCATGC+TGG | 0.435176 | 3.1:-63555086 | MS.gene70658:CDS |
| GAAGGACGTCACATTGTTGT+AGG | 0.469222 | 3.1:-63556456 | MS.gene70658:CDS |
| TTCATAGAGCTGAACACAAT+AGG | 0.471632 | 3.1:-63554366 | MS.gene70658:CDS |
| CGGATGTGTCGAACATATGT+TGG | 0.480729 | 3.1:-63556545 | MS.gene70658:CDS |
| TGGACATGTGAGAAAGTCTA+AGG | 0.493316 | 3.1:-63555213 | MS.gene70658:CDS |
| TCTCAAGGAGAATACAGTAT+TGG | 0.501201 | 3.1:+63560376 | None:intergenic |
| CTCATAACTATCTGCATCAC+CGG | 0.501774 | 3.1:+63555283 | None:intergenic |
| TGTGTTCAGCTCTATGAACT+TGG | 0.502541 | 3.1:+63554371 | None:intergenic |
| CGTCACATTGTTGTAGGGAC+AGG | 0.511259 | 3.1:-63556450 | MS.gene70658:CDS |
| GAACATATGTTGGTTTCTTG+AGG | 0.516624 | 3.1:-63556535 | MS.gene70658:CDS |
| TGAGGTTGCACAGAGTGGTC+GGG | 0.518842 | 3.1:-63556491 | MS.gene70658:CDS |
| CGGGTGTTGGAACCTCAGCC+AGG | 0.519890 | 3.1:-63554132 | MS.gene70658:CDS |
| TTTACTGTCTCCAAAAGCAC+TGG | 0.523305 | 3.1:-63555095 | MS.gene70658:CDS |
| CTCAAAGGATTCACAGCTAA+GGG | 0.530012 | 3.1:-63554340 | MS.gene70658:CDS |
| CAAGTTCAGCCACAATGTCA+TGG | 0.530495 | 3.1:-63554247 | MS.gene70658:CDS |
| AGGGTTAGATCATGATCAGC+AGG | 0.530601 | 3.1:+63555119 | None:intergenic |
| TGAAGTTACCAGCTCAATGT+AGG | 0.539157 | 3.1:+63555250 | None:intergenic |
| AAAGTCTGGGCTATACAAAT+GGG | 0.539522 | 3.1:-63555306 | MS.gene70658:CDS |
| GTGAGGTTGCACAGAGTGGT+CGG | 0.541528 | 3.1:-63556492 | MS.gene70658:CDS |
| GTCATGCTGGAATGCGCATA+GGG | 0.544990 | 3.1:-63555073 | MS.gene70658:intron |
| GCAAAGATCTTACAGGAAGC+AGG | 0.553972 | 3.1:-63560184 | MS.gene70658:CDS |
| ATCTATTGGCCATGACATTG+TGG | 0.554598 | 3.1:+63554238 | None:intergenic |
| TCTCAAAGGATTCACAGCTA+AGG | 0.564893 | 3.1:-63554341 | MS.gene70658:CDS |
| ACTTCACCAAATAATCCTGA+TGG | 0.567724 | 3.1:-63555233 | MS.gene70658:CDS |
| GAAGTTACCAGCTCAATGTA+GGG | 0.569052 | 3.1:+63555251 | None:intergenic |
| TCTAAGGTCAATAGAAGTCA+GGG | 0.569257 | 3.1:-63555197 | MS.gene70658:CDS |
| GGTCATGCTGGAATGCGCAT+AGG | 0.576437 | 3.1:-63555074 | MS.gene70658:CDS |
| CAAAATCTTTCATATACTGT+CGG | 0.576752 | 3.1:+63556630 | None:intergenic |
| GCAGATAGTTATGAGAAAGA+TGG | 0.577934 | 3.1:-63555275 | MS.gene70658:CDS |
| TGAGGCGGAGTTTGCAAAGG+AGG | 0.582298 | 3.1:-63556517 | MS.gene70658:CDS |
| GAGGTACTGACAGAGTAGTA+GGG | 0.582444 | 3.1:+63556345 | None:intergenic |
| AGATGGTCCCTACATTGAGC+TGG | 0.583290 | 3.1:-63555258 | MS.gene70658:CDS |
| TCTTGAGGCGGAGTTTGCAA+AGG | 0.585082 | 3.1:-63556520 | MS.gene70658:CDS |
| TTTGTGTGGTTGAAGTGTGA+GGG | 0.593136 | 3.1:-63553769 | None:intergenic |
| GTCGGGAATGCAGTCACAGA+AGG | 0.597637 | 3.1:-63556474 | MS.gene70658:CDS |
| CATATGTTGGTTTCTTGAGG+CGG | 0.599386 | 3.1:-63556532 | MS.gene70658:CDS |
| GAACACAATAGGAGTCTCAA+AGG | 0.600681 | 3.1:-63554355 | MS.gene70658:CDS |
| AAGGACGTCACATTGTTGTA+GGG | 0.613466 | 3.1:-63556455 | MS.gene70658:CDS |
| TCTGGGCTATACAAATGGGC+CGG | 0.614450 | 3.1:-63555302 | MS.gene70658:CDS |
| ACTGACAGAGTAGTAGGGTG+AGG | 0.616487 | 3.1:+63556350 | None:intergenic |
| TGACAGATTACCTAAAGTCT+GGG | 0.616751 | 3.1:-63555319 | MS.gene70658:CDS |
| TGAAACTCACATTCAAAGCG+AGG | 0.622345 | 3.1:+63560336 | None:intergenic |
| GTATAGTATAGTATAATACC+TGG | 0.624779 | 3.1:+63554114 | None:intergenic |
| TATAGTATAATACCTGGCTG+AGG | 0.632244 | 3.1:+63554120 | None:intergenic |
| TGGTTGAGATGCATGATTTG+GGG | 0.633726 | 3.1:+63556389 | None:intergenic |
| GGTAGTGAGGTTGCACAGAG+TGG | 0.634131 | 3.1:-63556496 | MS.gene70658:CDS |
| GGCACTAGTGAAAGACAAAG+AGG | 0.646980 | 3.1:-63554409 | MS.gene70658:CDS |
| GAAACTCACATTCAAAGCGA+GGG | 0.661691 | 3.1:+63560337 | None:intergenic |
| AAGAGCACGATCATAATACC+AGG | 0.663504 | 3.1:-63556591 | MS.gene70658:CDS |
| GCACGATCATAATACCAGGA+TGG | 0.664582 | 3.1:-63556587 | MS.gene70658:CDS |
| GATGATATAGGAGTATATTG+TGG | 0.666012 | 3.1:+63555143 | None:intergenic |
| TAATGTTCACAAATCACGTG+TGG | 0.673343 | 3.1:-63560243 | MS.gene70658:CDS |
| AGTTTGCAAAGGAGGTAGTG+AGG | 0.676432 | 3.1:-63556509 | MS.gene70658:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAATAAAATAAATATCAT+TGG | - | chr3.1:63560228-63560247 | MS.gene70658:CDS | 10.0% |
| !! | AGAATAAAATAAATATCATT+GGG | - | chr3.1:63560229-63560248 | MS.gene70658:CDS | 10.0% |
| !! | ATACAAAATAAATAAGAAAA+TGG | + | chr3.1:63558278-63558297 | None:intergenic | 10.0% |
| !! | TATTAGTAAAATTGTAATTT+AGG | - | chr3.1:63559630-63559649 | MS.gene70658:intron | 10.0% |
| !!! | AAATTACAATTTTACTAATA+AGG | + | chr3.1:63559630-63559649 | None:intergenic | 10.0% |
| !!! | TATTGATTTTTTAATTTGTT+TGG | - | chr3.1:63558489-63558508 | MS.gene70658:intron | 10.0% |
| !! | AAAATAAATAAGAAAATGGT+AGG | + | chr3.1:63558274-63558293 | None:intergenic | 15.0% |
| !! | AAATCATTATGTACATTATT+AGG | - | chr3.1:63555428-63555447 | MS.gene70658:intron | 15.0% |
| !! | AATCATATAATTATACAAGA+AGG | - | chr3.1:63558160-63558179 | MS.gene70658:intron | 15.0% |
| !! | ATAATATAATTCATATGTTC+GGG | + | chr3.1:63554552-63554571 | None:intergenic | 15.0% |
| !! | CATAATATAATTCATATGTT+CGG | + | chr3.1:63554553-63554572 | None:intergenic | 15.0% |
| !! | TTATAATTTCAAAAGTTAGT+TGG | - | chr3.1:63555269-63555288 | MS.gene70658:CDS | 15.0% |
| !! | TTATACTAATGAAAATCTAA+TGG | + | chr3.1:63556383-63556402 | None:intergenic | 15.0% |
| !! | TTCATATATAATGATATTTG+AGG | - | chr3.1:63559587-63559606 | MS.gene70658:intron | 15.0% |
| !! | TTCTTGTATAATTATATGAT+TGG | + | chr3.1:63558161-63558180 | None:intergenic | 15.0% |
| !!! | AATGAAATATTTTAACGTTA+AGG | + | chr3.1:63554723-63554742 | None:intergenic | 15.0% |
| !!! | ATCATTGATTTTTTTTTTTG+AGG | - | chr3.1:63555788-63555807 | MS.gene70658:intron | 15.0% |
| !!! | ATTTTCATTAGTATAACTTT+TGG | - | chr3.1:63556387-63556406 | MS.gene70658:CDS | 15.0% |
| !!! | CATTTTCTTTTTTTTTTTGA+GGG | - | chr3.1:63556561-63556580 | MS.gene70658:CDS | 15.0% |
| !!! | TAAAATTAACCAATTTTGTT+TGG | + | chr3.1:63559537-63559556 | None:intergenic | 15.0% |
| !!! | TCATTGATTTTTTTTTTTGA+GGG | - | chr3.1:63555789-63555808 | MS.gene70658:intron | 15.0% |
| !! | AAAAGAAAGAAAACAAGTTA+AGG | + | chr3.1:63557841-63557860 | None:intergenic | 20.0% |
| !! | AAAATATATGTATCCTTATC+TGG | + | chr3.1:63557021-63557040 | None:intergenic | 20.0% |
| !! | AAATATATGTATCCTTATCT+GGG | + | chr3.1:63557020-63557039 | None:intergenic | 20.0% |
| !! | AAGCACTTATTAGTAAAATA+AGG | - | chr3.1:63555545-63555564 | MS.gene70658:intron | 20.0% |
| !! | ACAATAAACATGTACTTATA+AGG | + | chr3.1:63554795-63554814 | None:intergenic | 20.0% |
| !! | ACTAACAAAATGTACAATTA+GGG | + | chr3.1:63554691-63554710 | None:intergenic | 20.0% |
| !! | AGTACATATTAAGATCTATT+TGG | + | chr3.1:63556927-63556946 | None:intergenic | 20.0% |
| !! | ATGACAATAAGTAAGTATAT+TGG | + | chr3.1:63554766-63554785 | None:intergenic | 20.0% |
| !! | CAACCTTAAATAAAAATGAA+GGG | + | chr3.1:63554057-63554076 | None:intergenic | 20.0% |
| !! | CCTCAAAAAAAAAAAGAAAA+TGG | + | chr3.1:63556563-63556582 | None:intergenic | 20.0% |
| !! | GAATAATCATTACATATTCA+GGG | - | chr3.1:63554946-63554965 | MS.gene70658:intron | 20.0% |
| !! | GACTTCAATTAAATTAATCA+AGG | - | chr3.1:63557474-63557493 | MS.gene70658:intron | 20.0% |
| !! | GATATTTATACACAAACTAA+AGG | + | chr3.1:63560149-63560168 | None:intergenic | 20.0% |
| !! | GGTAAAAAATTGTAAATTTG+TGG | + | chr3.1:63560128-63560147 | None:intergenic | 20.0% |
| !! | TATATAATGATATTTGAGGA+TGG | - | chr3.1:63559591-63559610 | MS.gene70658:intron | 20.0% |
| !! | TATCAATTGACAAATTTGAT+AGG | - | chr3.1:63560084-63560103 | MS.gene70658:intron | 20.0% |
| !! | TATGAAGTTACAGATTTAAA+AGG | + | chr3.1:63559573-63559592 | None:intergenic | 20.0% |
| !! | TGAATAATCATTACATATTC+AGG | - | chr3.1:63554945-63554964 | MS.gene70658:intron | 20.0% |
| !! | TGACAACTAAATATTTGTTT+AGG | + | chr3.1:63558575-63558594 | None:intergenic | 20.0% |
| !! | TTAAAATATGAATAACATGC+TGG | - | chr3.1:63559429-63559448 | MS.gene70658:intron | 20.0% |
| !! | TTAATCATCAAACTAATTGA+GGG | + | chr3.1:63555215-63555234 | None:intergenic | 20.0% |
| !! | TTATTGTATGTTTGAATTTG+CGG | - | chr3.1:63558015-63558034 | MS.gene70658:intron | 20.0% |
| !!! | AACATGAGTAATAATCATTT+TGG | - | chr3.1:63559126-63559145 | MS.gene70658:intron | 20.0% |
| !!! | ACAATAACTCTTTTCATATA+GGG | + | chr3.1:63554827-63554846 | None:intergenic | 20.0% |
| !!! | ATAAGCAAAAATCTACATTT+TGG | + | chr3.1:63555700-63555719 | None:intergenic | 20.0% |
| !!! | CCATTTTCTTTTTTTTTTTG+AGG | - | chr3.1:63556560-63556579 | MS.gene70658:CDS | 20.0% |
| !!! | GTATTTTTCCATTTTCTTAT+GGG | - | chr3.1:63556583-63556602 | MS.gene70658:CDS | 20.0% |
| !!! | TTAACTTGTTTTCTTTCTTT+TGG | - | chr3.1:63557840-63557859 | MS.gene70658:intron | 20.0% |
| !!! | TTGAAATTTTGATACAATGA+AGG | - | chr3.1:63554915-63554934 | MS.gene70658:intron | 20.0% |
| !!! | TTTACTTGTGTTTTTAGAAA+GGG | + | chr3.1:63554990-63555009 | None:intergenic | 20.0% |
| !!! | TTTCTATTTTTGAGTACTTT+TGG | - | chr3.1:63556443-63556462 | MS.gene70658:CDS | 20.0% |
| !!! | TTTTAATTTGTTTGGATTAG+TGG | - | chr3.1:63558497-63558516 | MS.gene70658:intron | 20.0% |
| !!! | TTTTACTTGTGTTTTTAGAA+AGG | + | chr3.1:63554991-63555010 | None:intergenic | 20.0% |
| !!! | TTTTATCAAACGATCAATAT+TGG | + | chr3.1:63556162-63556181 | None:intergenic | 20.0% |
| !!! | TTTTATTTAAAATCATCCCT+TGG | + | chr3.1:63559387-63559406 | None:intergenic | 20.0% |
| ! | AAAACTAATAGTACATCACT+AGG | - | chr3.1:63555844-63555863 | MS.gene70658:intron | 25.0% |
| ! | AAAAGGGTTAATAGTCAATT+TGG | - | chr3.1:63554604-63554623 | MS.gene70658:intron | 25.0% |
| ! | AACATCACAAACTTTCTAAA+AGG | - | chr3.1:63554587-63554606 | MS.gene70658:intron | 25.0% |
| ! | AATATGAGAAATTAGAAGAG+AGG | + | chr3.1:63557341-63557360 | None:intergenic | 25.0% |
| ! | ACAATAAGTAAGTATATTGG+AGG | + | chr3.1:63554763-63554782 | None:intergenic | 25.0% |
| ! | ACATCACTAGGAAAAAAAAT+CGG | - | chr3.1:63555856-63555875 | MS.gene70658:intron | 25.0% |
| ! | AGAATTCTTCAAAGAAGAAA+TGG | + | chr3.1:63553953-63553972 | None:intergenic | 25.0% |
| ! | ATTGATACTATTATATGCAG+TGG | - | chr3.1:63557504-63557523 | MS.gene70658:intron | 25.0% |
| ! | CAAAATCTTTCATATACTGT+CGG | + | chr3.1:63557534-63557553 | None:intergenic | 25.0% |
| ! | CATTCAATTATTGATGTATG+TGG | - | chr3.1:63555635-63555654 | MS.gene70658:intron | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | + | chr3.1:63555674-63555693 | None:intergenic | 25.0% |
| ! | CTTAATCATCAAACTAATTG+AGG | + | chr3.1:63555216-63555235 | None:intergenic | 25.0% |
| ! | GACTAACAAAATGTACAATT+AGG | + | chr3.1:63554692-63554711 | None:intergenic | 25.0% |
| ! | GCAACCTTAAATAAAAATGA+AGG | + | chr3.1:63554058-63554077 | None:intergenic | 25.0% |
| ! | GTATAGTATAGTATAATACC+TGG | + | chr3.1:63560050-63560069 | None:intergenic | 25.0% |
| ! | GTGTATTTATTCTTAATGTG+AGG | + | chr3.1:63559215-63559234 | None:intergenic | 25.0% |
| ! | TAAAAGACTAAAAAACCCAA+CGG | + | chr3.1:63555075-63555094 | None:intergenic | 25.0% |
| ! | TATTCAAAGAAGAGTTGTTA+TGG | + | chr3.1:63553882-63553901 | None:intergenic | 25.0% |
| ! | TGACTTATAACTAAAAAACC+CGG | - | chr3.1:63555036-63555055 | MS.gene70658:intron | 25.0% |
| ! | TGTATAAATATCTCAAGTGT+TGG | - | chr3.1:63560157-63560176 | MS.gene70658:intron | 25.0% |
| ! | TTAGTAAACAAATGCTTGTT+TGG | - | chr3.1:63557403-63557422 | MS.gene70658:intron | 25.0% |
| ! | TTGATACTATTATATGCAGT+GGG | - | chr3.1:63557505-63557524 | MS.gene70658:intron | 25.0% |
| !! | AACTCTTACAACAAATCTTT+TGG | + | chr3.1:63557169-63557188 | None:intergenic | 25.0% |
| !! | ACATCACAAACTTTCTAAAA+GGG | - | chr3.1:63554588-63554607 | MS.gene70658:intron | 25.0% |
| !! | CAATTTCTAGAGAAATTCTT+AGG | + | chr3.1:63556116-63556135 | None:intergenic | 25.0% |
| !! | CACAATAACTCTTTTCATAT+AGG | + | chr3.1:63554828-63554847 | None:intergenic | 25.0% |
| !! | CTTTTACAAAATCTTGGTAT+CGG | + | chr3.1:63554174-63554193 | None:intergenic | 25.0% |
| !! | CTTTTATGTCTGACAATTTT+TGG | + | chr3.1:63554480-63554499 | None:intergenic | 25.0% |
| !! | GGATACATATATTTTGCAAA+AGG | - | chr3.1:63557026-63557045 | MS.gene70658:intron | 25.0% |
| !! | GGTATTTTTCCATTTTCTTA+TGG | - | chr3.1:63556582-63556601 | MS.gene70658:CDS | 25.0% |
| !! | TAATTTAGGCATGCAAATTT+TGG | - | chr3.1:63559644-63559663 | MS.gene70658:intron | 25.0% |
| !! | TAGACATGCAGTTAATTTTT+AGG | - | chr3.1:63554256-63554275 | MS.gene70658:CDS | 25.0% |
| !! | TATAGTTTTTGTCAAAATCG+TGG | - | chr3.1:63554202-63554221 | MS.gene70658:CDS | 25.0% |
| !! | TCAACTTTGTATGTACTTTT+AGG | - | chr3.1:63559727-63559746 | MS.gene70658:intron | 25.0% |
| !! | TGTTAATAAGTTTGTTCCTT+CGG | - | chr3.1:63559291-63559310 | MS.gene70658:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGTC+CGG | + | chr3.1:63555600-63555619 | None:intergenic | 25.0% |
| !!! | ATTTTGCAACTTTTTCAATC+GGG | - | chr3.1:63560010-63560029 | MS.gene70658:intron | 25.0% |
| !!! | ATTTTTTTGGCAAATTCAAG+TGG | + | chr3.1:63555484-63555503 | None:intergenic | 25.0% |
| !!! | CATTTTGCAACTTTTTCAAT+CGG | - | chr3.1:63560009-63560028 | MS.gene70658:intron | 25.0% |
| !!! | CTTCCCTTCATTTTTATTTA+AGG | - | chr3.1:63554051-63554070 | MS.gene70658:intron | 25.0% |
| !!! | GAAAGGTATCTTAATTCATA+CGG | + | chr3.1:63556310-63556329 | None:intergenic | 25.0% |
| !!! | GCAAATTTTGGTTTTCTAAT+AGG | - | chr3.1:63559656-63559675 | MS.gene70658:intron | 25.0% |
| !!! | GTTTTTTAGTTATAAGTCAG+CGG | + | chr3.1:63555035-63555054 | None:intergenic | 25.0% |
| !!! | TTACTTGTGTTTTTAGAAAG+GGG | + | chr3.1:63554989-63555008 | None:intergenic | 25.0% |
| !!! | TTGAAGTTTTGATACATTGA+AGG | + | chr3.1:63554662-63554681 | None:intergenic | 25.0% |
| !!! | TTTTTTTGGCAAATTCAAGT+GGG | + | chr3.1:63555483-63555502 | None:intergenic | 25.0% |
| AAACAAATGCTTGTTTGGTA+TGG | - | chr3.1:63557408-63557427 | MS.gene70658:intron | 30.0% | |
| AACTGAATGATTCACCATTT+GGG | + | chr3.1:63556472-63556491 | None:intergenic | 30.0% | |
| AAGTATAACAACTGCATAGT+GGG | - | chr3.1:63556627-63556646 | MS.gene70658:CDS | 30.0% | |
| ACACAAGTAAAATATTCCAG+CGG | - | chr3.1:63554999-63555018 | MS.gene70658:intron | 30.0% | |
| ACATCAAGTAGGTAATATCA+TGG | + | chr3.1:63559340-63559359 | None:intergenic | 30.0% | |
| AGAAAGAAAACAAGTTAAGG+AGG | + | chr3.1:63557838-63557857 | None:intergenic | 30.0% | |
| AGAGTTTCTCCAATTTCTAT+CGG | + | chr3.1:63555930-63555949 | None:intergenic | 30.0% | |
| AGTTGTTATACCCTTGATAA+CGG | - | chr3.1:63558425-63558444 | MS.gene70658:intron | 30.0% | |
| ATAAGTCATTGTCTTTAACG+TGG | - | chr3.1:63554441-63554460 | MS.gene70658:intron | 30.0% | |
| ATTAAGGGAGTTTGCATTAA+GGG | + | chr3.1:63556280-63556299 | None:intergenic | 30.0% | |
| CAACTGTAACCAAACAAAAT+TGG | - | chr3.1:63559525-63559544 | MS.gene70658:intron | 30.0% | |
| CATGTTCATTGAGATCAATT+AGG | + | chr3.1:63556719-63556738 | None:intergenic | 30.0% | |
| CCAAAGAATGATAGAAAGAT+GGG | + | chr3.1:63556769-63556788 | None:intergenic | 30.0% | |
| GAAAAATGACTCATTCTCTA+GGG | + | chr3.1:63559895-63559914 | None:intergenic | 30.0% | |
| GAAAGTTATGTTGAACTTAC+TGG | + | chr3.1:63554023-63554042 | None:intergenic | 30.0% | |
| GACTACTCATTACAATTTCA+GGG | + | chr3.1:63554631-63554650 | None:intergenic | 30.0% | |
| GATATAAAGTTATACCTGCA+TGG | - | chr3.1:63560277-63560296 | MS.gene70658:CDS | 30.0% | |
| GATATAACCAATGTCAATTG+AGG | + | chr3.1:63555407-63555426 | None:intergenic | 30.0% | |
| GATATGTTCTTGAAACAGTT+TGG | - | chr3.1:63557869-63557888 | MS.gene70658:intron | 30.0% | |
| GGACTAAAATAACATCAAGT+AGG | + | chr3.1:63559351-63559370 | None:intergenic | 30.0% | |
| GTGTACATTTGACAAACAAA+CGG | + | chr3.1:63558629-63558648 | None:intergenic | 30.0% | |
| GTTGAGTTTGTAACTAAGAA+GGG | + | chr3.1:63556857-63556876 | None:intergenic | 30.0% | |
| TAAGTATAACAACTGCATAG+TGG | - | chr3.1:63556626-63556645 | MS.gene70658:CDS | 30.0% | |
| TATATAAGTGTCTTGCGATA+GGG | + | chr3.1:63556418-63556437 | None:intergenic | 30.0% | |
| TATGAAGACAAACAAAGAGA+AGG | + | chr3.1:63558363-63558382 | None:intergenic | 30.0% | |
| TGAAAAAGTTGCAAAATGCA+GGG | + | chr3.1:63560007-63560026 | None:intergenic | 30.0% | |
| TGAAAAATGACTCATTCTCT+AGG | + | chr3.1:63559896-63559915 | None:intergenic | 30.0% | |
| TGAATCACATTAGTGTCTTA+GGG | - | chr3.1:63558718-63558737 | MS.gene70658:intron | 30.0% | |
| TGACTACTCATTACAATTTC+AGG | + | chr3.1:63554632-63554651 | None:intergenic | 30.0% | |
| TGAGACAGAAAATTAATTGC+AGG | + | chr3.1:63558313-63558332 | None:intergenic | 30.0% | |
| TGATACTATTATATGCAGTG+GGG | - | chr3.1:63557506-63557525 | MS.gene70658:intron | 30.0% | |
| TGTGACCAAAGAAAATTTCT+TGG | - | chr3.1:63556080-63556099 | MS.gene70658:intron | 30.0% | |
| TGTTTATTTGTGAAGAGAGA+GGG | + | chr3.1:63556009-63556028 | None:intergenic | 30.0% | |
| TTATATAAGTGTCTTGCGAT+AGG | + | chr3.1:63556419-63556438 | None:intergenic | 30.0% | |
| TTCGACAAGAAATCTACATT+GGG | + | chr3.1:63560340-63560359 | None:intergenic | 30.0% | |
| TTGAAAAAGTTGCAAAATGC+AGG | + | chr3.1:63560008-63560027 | None:intergenic | 30.0% | |
| TTGAATCACATTAGTGTCTT+AGG | - | chr3.1:63558717-63558736 | MS.gene70658:intron | 30.0% | |
| TTGAGTTTGTAACTAAGAAG+GGG | + | chr3.1:63556856-63556875 | None:intergenic | 30.0% | |
| TTGTTTATTTGTGAAGAGAG+AGG | + | chr3.1:63556010-63556029 | None:intergenic | 30.0% | |
| TTTAGGTAATCTGTCATTGA+TGG | + | chr3.1:63558838-63558857 | None:intergenic | 30.0% | |
| TTTCGACAAGAAATCTACAT+TGG | + | chr3.1:63560341-63560360 | None:intergenic | 30.0% | |
| TTTGTTTGGTTACAGTTGAA+GGG | + | chr3.1:63559523-63559542 | None:intergenic | 30.0% | |
| ! | ACCATTAATTTGAGACTGAA+CGG | + | chr3.1:63556235-63556254 | None:intergenic | 30.0% |
| ! | ACTTTGTATGTACTTTTAGG+TGG | - | chr3.1:63559730-63559749 | MS.gene70658:intron | 30.0% |
| ! | ATACTGCGAATGTTTTATGA+TGG | - | chr3.1:63553847-63553866 | MS.gene70658:intron | 30.0% |
| ! | ATTTATTTGCAGCTTTTGTG+TGG | - | chr3.1:63560378-63560397 | MS.gene70658:CDS | 30.0% |
| ! | CGACAGTATATGAAAGATTT+TGG | - | chr3.1:63557532-63557551 | MS.gene70658:intron | 30.0% |
| ! | GATGATATAGGAGTATATTG+TGG | + | chr3.1:63559021-63559040 | None:intergenic | 30.0% |
| ! | TGGATGCATGTTTGAAATTA+CGG | + | chr3.1:63558141-63558160 | None:intergenic | 30.0% |
| ! | TTCGAGCTTTTACAAAATCT+TGG | + | chr3.1:63554180-63554199 | None:intergenic | 30.0% |
| ! | TTTCTAGAGAAATTCTTAGG+TGG | + | chr3.1:63556113-63556132 | None:intergenic | 30.0% |
| !! | ACATGCAGTTAATTTTTAGG+TGG | - | chr3.1:63554259-63554278 | MS.gene70658:CDS | 30.0% |
| !! | ATGTTTTATGATGGTGAAGT+AGG | - | chr3.1:63553856-63553875 | MS.gene70658:intron | 30.0% |
| !! | CTTTGTATGTACTTTTAGGT+GGG | - | chr3.1:63559731-63559750 | MS.gene70658:intron | 30.0% |
| !! | TCAAGTGTTGGAACTTATAT+TGG | - | chr3.1:63560169-63560188 | MS.gene70658:CDS | 30.0% |
| !! | TGAAAGATTTTGGAGACAAA+CGG | - | chr3.1:63557542-63557561 | MS.gene70658:intron | 30.0% |
| !! | TTTTGTTTGGTTACAGTTGA+AGG | + | chr3.1:63559524-63559543 | None:intergenic | 30.0% |
| !!! | TACTTGTGTTTTTAGAAAGG+GGG | + | chr3.1:63554988-63555007 | None:intergenic | 30.0% |
| AAAGTCTGGGCTATACAAAT+GGG | - | chr3.1:63558855-63558874 | MS.gene70658:intron | 35.0% | |
| AAGAGAGAAGAGAGAGAAAA+TGG | + | chr3.1:63556040-63556059 | None:intergenic | 35.0% | |
| AATACGACAAAAGACGTTGA+AGG | + | chr3.1:63556674-63556693 | None:intergenic | 35.0% | |
| AATGGACATATCCAAGAAGA+GGG | + | chr3.1:63556881-63556900 | None:intergenic | 35.0% | |
| ACAACTGCTCACTATAATTC+TGG | - | chr3.1:63558669-63558688 | MS.gene70658:intron | 35.0% | |
| ACATGTCCATCAGGATTATT+TGG | + | chr3.1:63558937-63558956 | None:intergenic | 35.0% | |
| ACCGTTCAGTCTCAAATTAA+TGG | - | chr3.1:63556231-63556250 | MS.gene70658:intron | 35.0% | |
| ACTTCACCAAATAATCCTGA+TGG | - | chr3.1:63558928-63558947 | MS.gene70658:intron | 35.0% | |
| AGAATCTACCCTTTCTTACT+TGG | - | chr3.1:63554387-63554406 | MS.gene70658:CDS | 35.0% | |
| AGTATATTGTGGCCAGTAAT+AGG | + | chr3.1:63559010-63559029 | None:intergenic | 35.0% | |
| AGTTACGAGAATCAAGAAGT+TGG | - | chr3.1:63555891-63555910 | MS.gene70658:intron | 35.0% | |
| ATAACAACTACCATGTGATC+AGG | + | chr3.1:63558414-63558433 | None:intergenic | 35.0% | |
| ATATAAGTGTCTTGCGATAG+GGG | + | chr3.1:63556417-63556436 | None:intergenic | 35.0% | |
| ATGACAGATTACCTAAAGTC+TGG | - | chr3.1:63558841-63558860 | MS.gene70658:intron | 35.0% | |
| ATTGGTTGAGATGCATGATT+TGG | + | chr3.1:63557777-63557796 | None:intergenic | 35.0% | |
| ATTTGTATAGCCCAGACTTT+AGG | + | chr3.1:63558855-63558874 | None:intergenic | 35.0% | |
| CAAAGAAAATTTCTTGGTCC+TGG | - | chr3.1:63556086-63556105 | MS.gene70658:intron | 35.0% | |
| CAACTGAATGATTCACCATT+TGG | + | chr3.1:63556473-63556492 | None:intergenic | 35.0% | |
| CATCTTCATGTGTTAGGTTA+TGG | + | chr3.1:63556831-63556850 | None:intergenic | 35.0% | |
| CATTAAGGGAGTTTGCATTA+AGG | + | chr3.1:63556281-63556300 | None:intergenic | 35.0% | |
| CCCATCTTTCTATCATTCTT+TGG | - | chr3.1:63556766-63556785 | MS.gene70658:intron | 35.0% | |
| CTCAAGGAGAATACAGTATT+GGG | + | chr3.1:63553787-63553806 | None:intergenic | 35.0% | |
| CTTGTGTTTCCAAGACATAT+TGG | - | chr3.1:63555095-63555114 | MS.gene70658:CDS | 35.0% | |
| GAAAAAGTTGCAAAATGCAG+GGG | + | chr3.1:63560006-63560025 | None:intergenic | 35.0% | |
| GAAGTCTATAAGTCAGAGTT+TGG | + | chr3.1:63555454-63555473 | None:intergenic | 35.0% | |
| GAGTTATTGTGAACATTGAG+AGG | - | chr3.1:63554837-63554856 | MS.gene70658:intron | 35.0% | |
| GCAGATAGTTATGAGAAAGA+TGG | - | chr3.1:63558886-63558905 | MS.gene70658:intron | 35.0% | |
| GCCAAAGAATGATAGAAAGA+TGG | + | chr3.1:63556770-63556789 | None:intergenic | 35.0% | |
| GGGGATGTACTAATTAATGT+GGG | + | chr3.1:63559502-63559521 | None:intergenic | 35.0% | |
| GGTAACATCAAACATACACT+TGG | + | chr3.1:63558608-63558627 | None:intergenic | 35.0% | |
| GGTTGAGTTTGTAACTAAGA+AGG | + | chr3.1:63556858-63556877 | None:intergenic | 35.0% | |
| GTCATATGTCCGATAGAAAT+TGG | - | chr3.1:63555918-63555937 | MS.gene70658:intron | 35.0% | |
| GTTCACTTTCATACCAAACA+TGG | + | chr3.1:63557896-63557915 | None:intergenic | 35.0% | |
| TAAAGTCTGGGCTATACAAA+TGG | - | chr3.1:63558854-63558873 | MS.gene70658:intron | 35.0% | |
| TAATGTTCACAAATCACGTG+TGG | - | chr3.1:63553918-63553937 | MS.gene70658:intron | 35.0% | |
| TACAATAAGTGAGCTATGCT+AGG | + | chr3.1:63558003-63558022 | None:intergenic | 35.0% | |
| TAGGAAAAAAAATCGGTGCA+TGG | - | chr3.1:63555863-63555882 | MS.gene70658:intron | 35.0% | |
| TATAGTATAATACCTGGCTG+AGG | + | chr3.1:63560044-63560063 | None:intergenic | 35.0% | |
| TATTCGTCCTTTACTTGCAA+AGG | - | chr3.1:63556965-63556984 | MS.gene70658:intron | 35.0% | |
| TCAGAACACCAAGTAAGAAA+GGG | + | chr3.1:63554398-63554417 | None:intergenic | 35.0% | |
| TCATACGGAGTTTGCATTAA+GGG | + | chr3.1:63556295-63556314 | None:intergenic | 35.0% | |
| TCCTTGCAAATATCAACCAA+GGG | - | chr3.1:63559368-63559387 | MS.gene70658:intron | 35.0% | |
| TCCTTTACTTGCAAAGGTTT+GGG | - | chr3.1:63556971-63556990 | MS.gene70658:intron | 35.0% | |
| TCTACTTGCAAAGATCTTAC+AGG | - | chr3.1:63553970-63553989 | MS.gene70658:intron | 35.0% | |
| TCTATTTGGATCGATCGATT+AGG | + | chr3.1:63556913-63556932 | None:intergenic | 35.0% | |
| TCTCAAGGAGAATACAGTAT+TGG | + | chr3.1:63553788-63553807 | None:intergenic | 35.0% | |
| TCTTCTCTCTCTTCTTTCTT+TGG | - | chr3.1:63556056-63556075 | MS.gene70658:intron | 35.0% | |
| TGACAGATTACCTAAAGTCT+GGG | - | chr3.1:63558842-63558861 | MS.gene70658:intron | 35.0% | |
| TGACTGAGATAAGACTATCA+TGG | - | chr3.1:63556331-63556350 | MS.gene70658:intron | 35.0% | |
| TGCTTATAATAGTGACCAGA+TGG | - | chr3.1:63555713-63555732 | MS.gene70658:intron | 35.0% | |
| TGTGACCAAACCAAATTTCT+TGG | + | chr3.1:63555967-63555986 | None:intergenic | 35.0% | |
| TTCATACGGAGTTTGCATTA+AGG | + | chr3.1:63556296-63556315 | None:intergenic | 35.0% | |
| TTCATAGAGCTGAACACAAT+AGG | - | chr3.1:63559795-63559814 | MS.gene70658:intron | 35.0% | |
| TTCATGATCTTGCCTATTAC+TGG | - | chr3.1:63558995-63559014 | MS.gene70658:intron | 35.0% | |
| TTCTGACATCCAATATGTCT+TGG | + | chr3.1:63555107-63555126 | None:intergenic | 35.0% | |
| TTGCAAATGAATACACCATC+CGG | - | chr3.1:63555578-63555597 | MS.gene70658:intron | 35.0% | |
| TTGGTTGAGATGCATGATTT+GGG | + | chr3.1:63557776-63557795 | None:intergenic | 35.0% | |
| TTGTTTGGTTACAGTTGAAG+GGG | + | chr3.1:63559522-63559541 | None:intergenic | 35.0% | |
| ! | AAACTACATGTTTGGAGCTT+CGG | - | chr3.1:63558079-63558098 | MS.gene70658:intron | 35.0% |
| ! | AGGTGGATTTCTATTTATGC+AGG | + | chr3.1:63556654-63556673 | None:intergenic | 35.0% |
| ! | AGTCTTATCTCAGTCATGAA+AGG | + | chr3.1:63556327-63556346 | None:intergenic | 35.0% |
| ! | AGTTTTTGTCAAAATCGTGG+TGG | - | chr3.1:63554205-63554224 | MS.gene70658:CDS | 35.0% |
| ! | ATGCATGTTTGAAATTACGG+TGG | + | chr3.1:63558138-63558157 | None:intergenic | 35.0% |
| ! | ATTCATTCTTTTGCCATGCA+TGG | - | chr3.1:63556691-63556710 | MS.gene70658:intron | 35.0% |
| ! | ATTCTCCTTGAGACACTTTT+TGG | - | chr3.1:63553795-63553814 | MS.gene70658:intron | 35.0% |
| ! | CAGGACCAAGAAATTTTCTT+TGG | + | chr3.1:63556088-63556107 | None:intergenic | 35.0% |
| ! | CATGTGAGATTCTTCTGAAA+GGG | - | chr3.1:63558222-63558241 | MS.gene70658:intron | 35.0% |
| ! | TATCATGGAAGTGTACCTTT+CGG | - | chr3.1:63556346-63556365 | MS.gene70658:intron | 35.0% |
| ! | TCTAAGGTCAATAGAAGTCA+GGG | - | chr3.1:63558964-63558983 | MS.gene70658:intron | 35.0% |
| ! | TTTTACTAGCATACACCATC+TGG | + | chr3.1:63555731-63555750 | None:intergenic | 35.0% |
| !! | GAAAGATTTTGGAGACAAAC+GGG | - | chr3.1:63557543-63557562 | MS.gene70658:intron | 35.0% |
| !! | GAACATATGTTGGTTTCTTG+AGG | - | chr3.1:63557626-63557645 | MS.gene70658:intron | 35.0% |
| !! | GCTTTTGGAGACAGTAAAAA+GGG | + | chr3.1:63559064-63559083 | None:intergenic | 35.0% |
| !! | TGCTTTTGGAGACAGTAAAA+AGG | + | chr3.1:63559065-63559084 | None:intergenic | 35.0% |
| !!! | ATCATGTTTTTAGTCCATGC+AGG | + | chr3.1:63560294-63560313 | None:intergenic | 35.0% |
| !!! | GAGAGGTTATTTTAGTGTCA+AGG | - | chr3.1:63554854-63554873 | MS.gene70658:intron | 35.0% |
| !!! | GCAATCCATGAGCTATTTTT+CGG | - | chr3.1:63557596-63557615 | MS.gene70658:intron | 35.0% |
| AAAGGGGGTAATAGTCACTT+TGG | + | chr3.1:63554973-63554992 | None:intergenic | 40.0% | |
| AACTTAGAGGTAGACCATGT+AGG | - | chr3.1:63555314-63555333 | MS.gene70658:CDS | 40.0% | |
| AAGGACGTCACATTGTTGTA+GGG | - | chr3.1:63557706-63557725 | MS.gene70658:intron | 40.0% | |
| ACAATGTCATGGCCAATAGA+TGG | - | chr3.1:63559925-63559944 | MS.gene70658:intron | 40.0% | |
| ACTTAGAGGTAGACCATGTA+GGG | - | chr3.1:63555315-63555334 | MS.gene70658:CDS | 40.0% | |
| AGCTCTGCATGTTCAAAGTT+TGG | - | chr3.1:63555234-63555253 | MS.gene70658:CDS | 40.0% | |
| ATCTATTGGCCATGACATTG+TGG | + | chr3.1:63559926-63559945 | None:intergenic | 40.0% | |
| ATGGACATATCCAAGAAGAG+GGG | + | chr3.1:63556880-63556899 | None:intergenic | 40.0% | |
| ATGTTCAAAGTTTGGAGGGA+GGG | - | chr3.1:63555242-63555261 | MS.gene70658:CDS | 40.0% | |
| CAAACCAAATTTCTTGGTCC+TGG | + | chr3.1:63555961-63555980 | None:intergenic | 40.0% | |
| CAATGGACATATCCAAGAAG+AGG | + | chr3.1:63556882-63556901 | None:intergenic | 40.0% | |
| CACATCCGAAAAATAGCTCA+TGG | + | chr3.1:63557604-63557623 | None:intergenic | 40.0% | |
| CAGGACCAAGAAATTTGGTT+TGG | - | chr3.1:63555959-63555978 | MS.gene70658:intron | 40.0% | |
| CCATGTGAGATTCTTCTGAA+AGG | - | chr3.1:63558221-63558240 | MS.gene70658:intron | 40.0% | |
| CCTTTACTTGCAAAGGTTTG+GGG | - | chr3.1:63556972-63556991 | MS.gene70658:intron | 40.0% | |
| CCTTTCAGAAGAATCTCACA+TGG | + | chr3.1:63558224-63558243 | None:intergenic | 40.0% | |
| CTAGAGAGCCCATAAGAAAA+TGG | + | chr3.1:63556594-63556613 | None:intergenic | 40.0% | |
| CTCAAAGGATTCACAGCTAA+GGG | - | chr3.1:63559821-63559840 | MS.gene70658:intron | 40.0% | |
| CTCATAACTATCTGCATCAC+CGG | + | chr3.1:63558881-63558900 | None:intergenic | 40.0% | |
| CTGCATGTTCAAAGTTTGGA+GGG | - | chr3.1:63555238-63555257 | MS.gene70658:CDS | 40.0% | |
| GAAACAGTTTGGTCCATGTT+TGG | - | chr3.1:63557880-63557899 | MS.gene70658:intron | 40.0% | |
| GAAACTCACATTCAAAGCGA+GGG | + | chr3.1:63553827-63553846 | None:intergenic | 40.0% | |
| GAACACAATAGGAGTCTCAA+AGG | - | chr3.1:63559806-63559825 | MS.gene70658:intron | 40.0% | |
| GAAGTTACCAGCTCAATGTA+GGG | + | chr3.1:63558913-63558932 | None:intergenic | 40.0% | |
| GAGTGAGTTTGACACAACTA+CGG | + | chr3.1:63558548-63558567 | None:intergenic | 40.0% | |
| GGGGGATGTACTAATTAATG+TGG | + | chr3.1:63559503-63559522 | None:intergenic | 40.0% | |
| GTCAGAACACCAAGTAAGAA+AGG | + | chr3.1:63554399-63554418 | None:intergenic | 40.0% | |
| GTCCTTGCAAATATCAACCA+AGG | - | chr3.1:63559367-63559386 | MS.gene70658:intron | 40.0% | |
| GTCCTTTACTTGCAAAGGTT+TGG | - | chr3.1:63556970-63556989 | MS.gene70658:intron | 40.0% | |
| TAATGTGAGGCATGTAGTTC+AGG | + | chr3.1:63559202-63559221 | None:intergenic | 40.0% | |
| TATAAGTGTCTTGCGATAGG+GGG | + | chr3.1:63556416-63556435 | None:intergenic | 40.0% | |
| TCGATTAGGTAAAGGAGCAA+TGG | + | chr3.1:63556899-63556918 | None:intergenic | 40.0% | |
| TCTCAAAGGATTCACAGCTA+AGG | - | chr3.1:63559820-63559839 | MS.gene70658:intron | 40.0% | |
| TCTGCATGTTCAAAGTTTGG+AGG | - | chr3.1:63555237-63555256 | MS.gene70658:CDS | 40.0% | |
| TCTTAGCTGCTTCCATCTAT+TGG | + | chr3.1:63559940-63559959 | None:intergenic | 40.0% | |
| TGAAACTCACATTCAAAGCG+AGG | + | chr3.1:63553828-63553847 | None:intergenic | 40.0% | |
| TGAACCAGGACCAAGAAATT+TGG | - | chr3.1:63555954-63555973 | MS.gene70658:intron | 40.0% | |
| TGAAGTTACCAGCTCAATGT+AGG | + | chr3.1:63558914-63558933 | None:intergenic | 40.0% | |
| TGAATGATTCACCATTTGGG+CGG | + | chr3.1:63556469-63556488 | None:intergenic | 40.0% | |
| TGACGATAGATTCTAACCGA+AGG | + | chr3.1:63559310-63559329 | None:intergenic | 40.0% | |
| TGCAGCAAGAAAAAGTTGAG+AGG | + | chr3.1:63557739-63557758 | None:intergenic | 40.0% | |
| TGCTTATAATAGTGTCCGGA+TGG | + | chr3.1:63555596-63555615 | None:intergenic | 40.0% | |
| TGGACATGTGAGAAAGTCTA+AGG | - | chr3.1:63558948-63558967 | MS.gene70658:intron | 40.0% | |
| TGGATCGATCGATTAGGTAA+AGG | + | chr3.1:63556907-63556926 | None:intergenic | 40.0% | |
| TGGCGAATTCGACAAAGTTA+TGG | - | chr3.1:63558517-63558536 | MS.gene70658:intron | 40.0% | |
| TGGTTGAGATGCATGATTTG+GGG | + | chr3.1:63557775-63557794 | None:intergenic | 40.0% | |
| TGTGTTCAGCTCTATGAACT+TGG | + | chr3.1:63559793-63559812 | None:intergenic | 40.0% | |
| TGTTTGGTTACAGTTGAAGG+GGG | + | chr3.1:63559521-63559540 | None:intergenic | 40.0% | |
| ! | AAGAGCACGATCATAATACC+AGG | - | chr3.1:63557570-63557589 | MS.gene70658:intron | 40.0% |
| ! | ACCTCTAAGTTGAAGGCTTT+AGG | + | chr3.1:63555305-63555324 | None:intergenic | 40.0% |
| ! | ACGAGAATCAAGAAGTTGGT+AGG | - | chr3.1:63555895-63555914 | MS.gene70658:intron | 40.0% |
| ! | ATCATGGAAGTGTACCTTTC+GGG | - | chr3.1:63556347-63556366 | MS.gene70658:intron | 40.0% |
| ! | ATGGTCTACCTCTAAGTTGA+AGG | + | chr3.1:63555312-63555331 | None:intergenic | 40.0% |
| ! | GTCTAAGGTCAATAGAAGTC+AGG | - | chr3.1:63558963-63558982 | MS.gene70658:intron | 40.0% |
| ! | TCCCTTGGTTGATATTTGCA+AGG | + | chr3.1:63559372-63559391 | None:intergenic | 40.0% |
| ! | TTTACTGTCTCCAAAAGCAC+TGG | - | chr3.1:63559066-63559085 | MS.gene70658:intron | 40.0% |
| !! | CATATGTTGGTTTCTTGAGG+CGG | - | chr3.1:63557629-63557648 | MS.gene70658:intron | 40.0% |
| !! | CGAGAATCAAGAAGTTGGTA+GGG | - | chr3.1:63555896-63555915 | MS.gene70658:intron | 40.0% |
| !! | GGCATGTAGTTCAGGTTTTA+TGG | + | chr3.1:63559194-63559213 | None:intergenic | 40.0% |
| !! | TAGCACCAAAAAGTGTCTCA+AGG | + | chr3.1:63553803-63553822 | None:intergenic | 40.0% |
| !!! | CAACTTTTTCAATCGGGTGT+TGG | - | chr3.1:63560016-63560035 | MS.gene70658:intron | 40.0% |
| ACCTTGATACCAGAGAAGAC+AGG | - | chr3.1:63554417-63554436 | MS.gene70658:intron | 45.0% | |
| ACGACAAAAGACGTTGAAGG+TGG | + | chr3.1:63556671-63556690 | None:intergenic | 45.0% | |
| AGCACATGTGACCGTTATCA+AGG | + | chr3.1:63558439-63558458 | None:intergenic | 45.0% | |
| AGGGTTAGATCATGATCAGC+AGG | + | chr3.1:63559045-63559064 | None:intergenic | 45.0% | |
| AGTAGAAACAGAGAGCCAGT+AGG | + | chr3.1:63554355-63554374 | None:intergenic | 45.0% | |
| AGTTTGCAAAGGAGGTAGTG+AGG | - | chr3.1:63557652-63557671 | MS.gene70658:intron | 45.0% | |
| ATGGCAATTAGACACCCGAA+AGG | + | chr3.1:63556364-63556383 | None:intergenic | 45.0% | |
| CAAGTTCAGCCACAATGTCA+TGG | - | chr3.1:63559914-63559933 | MS.gene70658:intron | 45.0% | |
| CAATAGAAGTCAGGGACTTC+TGG | - | chr3.1:63558972-63558991 | MS.gene70658:intron | 45.0% | |
| CATGTTCAAAGTTTGGAGGG+AGG | - | chr3.1:63555241-63555260 | MS.gene70658:CDS | 45.0% | |
| CCCCAAACCTTTGCAAGTAA+AGG | + | chr3.1:63556975-63556994 | None:intergenic | 45.0% | |
| CCTTGATACCAGAGAAGACA+GGG | - | chr3.1:63554418-63554437 | MS.gene70658:intron | 45.0% | |
| CGGATGTGTCGAACATATGT+TGG | - | chr3.1:63557616-63557635 | MS.gene70658:intron | 45.0% | |
| CTTAGAGGTAGACCATGTAG+GGG | - | chr3.1:63555316-63555335 | MS.gene70658:CDS | 45.0% | |
| GAAGGACGTCACATTGTTGT+AGG | - | chr3.1:63557705-63557724 | MS.gene70658:intron | 45.0% | |
| GACTTTCTCACATGTCCATC+AGG | + | chr3.1:63558946-63558965 | None:intergenic | 45.0% | |
| GAGAAACTCTTGTGTGAACC+AGG | - | chr3.1:63555940-63555959 | MS.gene70658:intron | 45.0% | |
| GAGAAATTCTTAGGTGGTCC+AGG | + | chr3.1:63556107-63556126 | None:intergenic | 45.0% | |
| GAGCCAATACTATTGCCTAC+TGG | - | chr3.1:63554337-63554356 | MS.gene70658:CDS | 45.0% | |
| GAGCCAGTAGGCAATAGTAT+TGG | + | chr3.1:63554343-63554362 | None:intergenic | 45.0% | |
| GATCAATTAGGAGCCATGCA+TGG | + | chr3.1:63556707-63556726 | None:intergenic | 45.0% | |
| GCAAAGATCTTACAGGAAGC+AGG | - | chr3.1:63553977-63553996 | MS.gene70658:intron | 45.0% | |
| GCACATGTGACCGTTATCAA+GGG | + | chr3.1:63558438-63558457 | None:intergenic | 45.0% | |
| GCACGATCATAATACCAGGA+TGG | - | chr3.1:63557574-63557593 | MS.gene70658:intron | 45.0% | |
| GCCATTGTGACTTTGCATAG+AGG | + | chr3.1:63557938-63557957 | None:intergenic | 45.0% | |
| GCCTAAAGCCTTCAACTTAG+AGG | - | chr3.1:63555301-63555320 | MS.gene70658:CDS | 45.0% | |
| GCCTCTATGCAAAGTCACAA+TGG | - | chr3.1:63557934-63557953 | MS.gene70658:intron | 45.0% | |
| GCTGGTGGTATAGTTGTTCT+AGG | + | chr3.1:63555370-63555389 | None:intergenic | 45.0% | |
| GGCACTAGTGAAAGACAAAG+AGG | - | chr3.1:63559752-63559771 | MS.gene70658:intron | 45.0% | |
| TAGTGTTACACTCCCCTACA+TGG | + | chr3.1:63555331-63555350 | None:intergenic | 45.0% | |
| TATACCACCAGCACTATGAG+CGG | - | chr3.1:63555378-63555397 | MS.gene70658:intron | 45.0% | |
| TGACTTATCCCTGTCTTCTC+TGG | + | chr3.1:63554429-63554448 | None:intergenic | 45.0% | |
| TGATCAGCAGGCGATGATAT+AGG | + | chr3.1:63559033-63559052 | None:intergenic | 45.0% | |
| TGGACATATCCAAGAAGAGG+GGG | + | chr3.1:63556879-63556898 | None:intergenic | 45.0% | |
| TGTTCAAAGTTTGGAGGGAG+GGG | - | chr3.1:63555243-63555262 | MS.gene70658:CDS | 45.0% | |
| TTTGTGAAGAGAGAGGGAGA+AGG | + | chr3.1:63556003-63556022 | None:intergenic | 45.0% | |
| ! | CATTCTTTGGCTCATGCATG+TGG | - | chr3.1:63556779-63556798 | MS.gene70658:intron | 45.0% |
| ! | GTGATTTGTGCTCCCAGATA+AGG | - | chr3.1:63557005-63557024 | MS.gene70658:intron | 45.0% |
| !! | CTTATGGGCTCTCTAGAATC+TGG | - | chr3.1:63556598-63556617 | MS.gene70658:CDS | 45.0% |
| !! | GAGGTACTGACAGAGTAGTA+GGG | + | chr3.1:63557819-63557838 | None:intergenic | 45.0% |
| !! | GCTCTCTGTTTCTACTAGCT+AGG | - | chr3.1:63554359-63554378 | MS.gene70658:CDS | 45.0% |
| !! | TTTAAAAACAATAAATTAAA+AGG | + | chr3.1:63556513-63556532 | None:intergenic | 5.0% |
| !!! | ATAAATATGTATAATTTTTT+TGG | + | chr3.1:63555497-63555516 | None:intergenic | 5.0% |
| ACTGACAGAGTAGTAGGGTG+AGG | + | chr3.1:63557814-63557833 | None:intergenic | 50.0% | |
| ACTTGCAAAGGTTTGGGGAC+AGG | - | chr3.1:63556977-63556996 | MS.gene70658:intron | 50.0% | |
| AGATGGTCCCTACATTGAGC+TGG | - | chr3.1:63558903-63558922 | MS.gene70658:intron | 50.0% | |
| ATACCACCAGCACTATGAGC+GGG | - | chr3.1:63555379-63555398 | MS.gene70658:intron | 50.0% | |
| CAAACTCAACCCCCTCTTCT+TGG | - | chr3.1:63556867-63556886 | MS.gene70658:intron | 50.0% | |
| CAAGTCTGCACCTGATCACA+TGG | - | chr3.1:63558401-63558420 | MS.gene70658:intron | 50.0% | |
| CCCTGTCTTCTCTGGTATCA+AGG | + | chr3.1:63554421-63554440 | None:intergenic | 50.0% | |
| CGTCACATTGTTGTAGGGAC+AGG | - | chr3.1:63557711-63557730 | MS.gene70658:intron | 50.0% | |
| CTTGCAAAGGTTTGGGGACA+GGG | - | chr3.1:63556978-63556997 | MS.gene70658:intron | 50.0% | |
| GAGGCACAGACAACGTTGAT+TGG | + | chr3.1:63557795-63557814 | None:intergenic | 50.0% | |
| GGGGTGCATCTTCATGTGTT+AGG | + | chr3.1:63556837-63556856 | None:intergenic | 50.0% | |
| GTCATGCTGGAATGCGCATA+GGG | - | chr3.1:63559088-63559107 | MS.gene70658:intron | 50.0% | |
| TCTGGGCTATACAAATGGGC+CGG | - | chr3.1:63558859-63558878 | MS.gene70658:intron | 50.0% | |
| TCTTGAGGCGGAGTTTGCAA+AGG | - | chr3.1:63557641-63557660 | MS.gene70658:intron | 50.0% | |
| ! | AGTACTTTTGGCCGCCCAAA+TGG | - | chr3.1:63556455-63556474 | MS.gene70658:CDS | 50.0% |
| ! | TAGCTCATGGATTGCCATCC+TGG | + | chr3.1:63557591-63557610 | None:intergenic | 50.0% |
| ! | TCCAGCATGACCAGTGCTTT+TGG | + | chr3.1:63559079-63559098 | None:intergenic | 50.0% |
| !! | GGAGGTACTGACAGAGTAGT+AGG | + | chr3.1:63557820-63557839 | None:intergenic | 50.0% |
| !! | TCCAAAAGCACTGGTCATGC+TGG | - | chr3.1:63559075-63559094 | MS.gene70658:intron | 50.0% |
| AACGGCAGTTAACTGCTGCC+GGG | + | chr3.1:63555057-63555076 | None:intergenic | 55.0% | |
| AAGTGTCTTGCGATAGGGGG+TGG | + | chr3.1:63556413-63556432 | None:intergenic | 55.0% | |
| CAACGGCAGTTAACTGCTGC+CGG | + | chr3.1:63555058-63555077 | None:intergenic | 55.0% | |
| CAGCGGTAGTTAACTACCGC+TGG | + | chr3.1:63555035-63555016 | None:intergenic | 55.0% | |
| GCGGGGTCCTCAATTGACAT+TGG | - | chr3.1:63555397-63555416 | MS.gene70658:intron | 55.0% | |
| GGCAGCAGTTAACTGCCGTT+GGG | - | chr3.1:63555057-63555076 | MS.gene70658:intron | 55.0% | |
| GGTAGTGAGGTTGCACAGAG+TGG | - | chr3.1:63557665-63557684 | MS.gene70658:intron | 55.0% | |
| GGTCATGCTGGAATGCGCAT+AGG | - | chr3.1:63559087-63559106 | MS.gene70658:intron | 55.0% | |
| GTCGGGAATGCAGTCACAGA+AGG | - | chr3.1:63557687-63557706 | MS.gene70658:intron | 55.0% | |
| GTGAGGTTGCACAGAGTGGT+CGG | - | chr3.1:63557669-63557688 | MS.gene70658:intron | 55.0% | |
| TACCACCAGCACTATGAGCG+GGG | - | chr3.1:63555380-63555399 | MS.gene70658:intron | 55.0% | |
| TGAGGCGGAGTTTGCAAAGG+AGG | - | chr3.1:63557644-63557663 | MS.gene70658:intron | 55.0% | |
| TGAGGTTGCACAGAGTGGTC+GGG | - | chr3.1:63557670-63557689 | MS.gene70658:intron | 55.0% | |
| AAAGGTTTGGGGACAGGGCG+AGG | - | chr3.1:63556983-63557002 | MS.gene70658:intron | 60.0% | |
| CGGCAGCAGTTAACTGCCGT+TGG | - | chr3.1:63555056-63555075 | MS.gene70658:intron | 60.0% | |
| GAGGACCCCGCTCATAGTGC+TGG | + | chr3.1:63555388-63555407 | None:intergenic | 65.0% | |
| ! | GACCCCGCTCATAGTGCTGG+TGG | + | chr3.1:63555385-63555404 | None:intergenic | 65.0% |
| !! | CGGGTGTTGGAACCTCAGCC+AGG | - | chr3.1:63560029-63560048 | MS.gene70658:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 63553772 | 63560411 | 63553772 | ID=MS.gene70658 |
| chr3.1 | mRNA | 63553772 | 63560411 | 63553772 | ID=MS.gene70658.t1;Parent=MS.gene70658 |
| chr3.1 | exon | 63560161 | 63560411 | 63560161 | ID=MS.gene70658.t1.exon1;Parent=MS.gene70658.t1 |
| chr3.1 | CDS | 63560161 | 63560411 | 63560161 | ID=cds.MS.gene70658.t1;Parent=MS.gene70658.t1 |
| chr3.1 | exon | 63556356 | 63556659 | 63556356 | ID=MS.gene70658.t1.exon2;Parent=MS.gene70658.t1 |
| chr3.1 | CDS | 63556356 | 63556659 | 63556356 | ID=cds.MS.gene70658.t1;Parent=MS.gene70658.t1 |
| chr3.1 | exon | 63555074 | 63555354 | 63555074 | ID=MS.gene70658.t1.exon3;Parent=MS.gene70658.t1 |
| chr3.1 | CDS | 63555074 | 63555354 | 63555074 | ID=cds.MS.gene70658.t1;Parent=MS.gene70658.t1 |
| chr3.1 | exon | 63554078 | 63554434 | 63554078 | ID=MS.gene70658.t1.exon4;Parent=MS.gene70658.t1 |
| chr3.1 | CDS | 63554078 | 63554434 | 63554078 | ID=cds.MS.gene70658.t1;Parent=MS.gene70658.t1 |
| chr3.1 | exon | 63553772 | 63553793 | 63553772 | ID=MS.gene70658.t1.exon5;Parent=MS.gene70658.t1 |
| chr3.1 | CDS | 63553772 | 63553793 | 63553772 | ID=cds.MS.gene70658.t1;Parent=MS.gene70658.t1 |
| Gene Sequence |
| Protein sequence |
