AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70678

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70678.t1 MTR_3g076930 99.558 453 2 0 1 453 9 461 0.0 931
MS.gene70678.t1 MTR_7g088850 30.890 191 107 6 166 354 305 472 2.02e-19 91.3
MS.gene70678.t1 MTR_7g088830 32.673 202 111 6 152 348 660 841 1.92e-17 85.9
MS.gene70678.t1 MTR_2g086160 34.161 161 88 4 189 348 169 312 2.41e-17 83.6
MS.gene70678.t1 MTR_4g053350 35.404 161 86 5 189 348 164 307 2.80e-17 84.0
MS.gene70678.t1 MTR_4g053350 35.404 161 86 5 189 348 164 307 2.87e-17 84.0
MS.gene70678.t1 MTR_2g086160 34.161 161 88 4 189 348 169 312 3.37e-17 84.0
MS.gene70678.t1 MTR_2g095210 28.431 204 128 5 152 353 408 595 2.98e-16 81.6
MS.gene70678.t1 MTR_7g101870 28.780 205 126 6 152 353 481 668 1.96e-15 79.3
MS.gene70678.t1 MTR_1g063380 29.268 205 125 6 152 353 480 667 5.02e-15 78.2
MS.gene70678.t1 MTR_2g095320 27.723 202 119 5 152 353 423 597 7.20e-15 77.4
MS.gene70678.t1 MTR_7g089040 31.707 205 107 7 152 347 687 867 1.48e-14 76.6
MS.gene70678.t1 MTR_4g096870 31.401 207 115 8 152 355 121 303 2.30e-14 75.1
MS.gene70678.t1 MTR_7g088980 33.951 162 90 4 189 348 174 320 2.48e-14 75.1
MS.gene70678.t1 MTR_7g088980 33.951 162 90 4 189 348 350 496 2.54e-14 75.5
MS.gene70678.t1 MTR_7g088980 33.951 162 90 4 189 348 256 402 2.72e-14 75.1
MS.gene70678.t1 MTR_7g088980 33.951 162 90 4 189 348 324 470 3.04e-14 75.1
MS.gene70678.t1 MTR_4g011810 28.926 242 132 8 129 348 206 429 1.60e-13 72.8
MS.gene70678.t1 MTR_4g094270 30.000 170 101 4 191 356 196 351 1.76e-13 72.4
MS.gene70678.t1 MTR_6g033740 30.909 165 95 4 189 351 538 685 2.36e-13 72.8
MS.gene70678.t1 MTR_1g101870 32.716 162 88 5 191 349 546 689 6.23e-13 71.6
MS.gene70678.t1 MTR_1g101870 32.716 162 88 5 191 349 598 741 7.11e-13 71.2
MS.gene70678.t1 MTR_8g099065 29.697 165 97 4 189 351 572 719 9.19e-13 70.9
MS.gene70678.t1 MTR_5g009840 30.303 165 96 4 189 351 554 701 1.98e-12 70.1
MS.gene70678.t1 MTR_2g024440 26.786 168 106 3 189 356 343 493 2.47e-12 69.3
MS.gene70678.t1 MTR_2g024440 26.786 168 106 3 189 356 342 492 2.60e-12 69.3
MS.gene70678.t1 MTR_2g024440 27.108 166 104 3 189 354 260 408 3.34e-12 68.6
MS.gene70678.t1 MTR_3g092080 28.426 197 115 5 161 352 95 270 7.32e-12 67.0
MS.gene70678.t1 MTR_3g092080 29.940 167 91 5 191 352 125 270 9.46e-12 67.0
MS.gene70678.t1 MTR_7g089290 35.570 149 77 5 191 336 706 838 2.51e-11 66.6
MS.gene70678.t1 MTR_7g089290 35.570 149 77 5 191 336 678 810 2.68e-11 66.2
MS.gene70678.t1 MTR_1g099480 30.675 163 94 4 191 351 509 654 2.70e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70678.t1 AT4G24710 75.581 430 104 1 24 453 39 467 0.0 676
MS.gene70678.t1 AT4G24710 75.581 430 104 1 24 453 51 479 0.0 676
MS.gene70678.t1 AT4G24710 81.788 302 54 1 24 325 51 351 2.22e-177 500
MS.gene70678.t1 AT4G24710 81.788 302 54 1 24 325 51 351 2.22e-177 500
MS.gene70678.t1 AT3G53230 28.922 204 127 5 152 353 480 667 4.70e-17 84.3
MS.gene70678.t1 AT2G27600 34.783 161 87 5 189 348 166 309 1.44e-16 82.0
MS.gene70678.t1 AT5G03340 28.431 204 128 5 152 353 479 666 2.86e-15 79.0
MS.gene70678.t1 AT3G19740 33.750 160 87 4 191 348 742 884 7.52e-15 77.8
MS.gene70678.t1 AT3G56690 30.734 218 124 7 136 348 709 904 9.65e-15 77.4
MS.gene70678.t1 AT1G50140 33.125 160 88 4 191 348 730 872 1.18e-14 77.0
MS.gene70678.t1 AT1G50140 33.125 160 88 4 191 348 730 872 1.18e-14 77.0
MS.gene70678.t1 AT1G50140 33.125 160 88 4 191 348 752 894 1.28e-14 77.0
MS.gene70678.t1 AT1G50140 33.125 160 88 4 191 348 752 894 1.28e-14 77.0
MS.gene70678.t1 AT1G50140 33.125 160 88 4 191 348 752 894 1.28e-14 77.0
MS.gene70678.t1 AT5G52882 26.840 231 112 6 189 417 552 727 1.37e-14 76.6
MS.gene70678.t1 AT4G04180 27.976 168 104 4 189 356 357 507 1.94e-14 75.9
MS.gene70678.t1 AT4G04180 27.976 168 104 4 189 356 362 512 2.16e-14 75.9
MS.gene70678.t1 AT5G20000 30.000 170 101 4 191 356 198 353 4.82e-14 74.3
MS.gene70678.t1 AT5G19990 30.000 170 101 4 191 356 198 353 5.04e-14 73.9
MS.gene70678.t1 AT5G19990 30.000 170 101 4 191 356 198 353 5.04e-14 73.9
MS.gene70678.t1 AT5G19990 30.000 170 101 4 191 356 140 295 5.32e-14 73.6
MS.gene70678.t1 AT3G09840 29.143 175 108 3 181 353 507 667 7.11e-14 74.3
MS.gene70678.t1 AT2G03670 29.612 206 114 6 152 348 285 468 1.06e-13 73.6
MS.gene70678.t1 AT2G03670 31.176 170 95 6 185 348 53 206 4.20e-12 68.6
MS.gene70678.t1 AT4G28000 29.697 165 97 4 189 351 553 700 4.78e-13 72.0
MS.gene70678.t1 AT1G64110 29.697 165 97 4 189 351 551 698 4.89e-13 72.0
MS.gene70678.t1 AT1G64110 29.697 165 97 4 189 351 554 701 4.98e-13 72.0
MS.gene70678.t1 AT1G64110 29.697 165 97 4 189 351 554 701 4.98e-13 72.0
MS.gene70678.t1 AT1G64110 29.697 165 97 4 189 351 556 703 5.03e-13 72.0
MS.gene70678.t1 AT1G64110 29.697 165 97 4 189 351 556 703 5.03e-13 72.0
MS.gene70678.t1 AT4G28000 29.697 165 97 4 189 351 555 702 5.22e-13 71.6
MS.gene70678.t1 AT4G28000 29.697 165 97 4 189 351 555 702 5.41e-13 71.6
MS.gene70678.t1 AT2G03670 31.176 170 95 6 185 348 53 206 2.80e-12 68.9
MS.gene70678.t1 AT4G04910 26.455 189 124 5 165 348 227 405 6.25e-12 68.2
MS.gene70678.t1 AT5G53540 29.091 165 95 4 191 352 125 270 1.62e-11 66.2
MS.gene70678.t1 AT3G15120 31.220 205 124 8 145 347 722 911 5.03e-11 65.9
MS.gene70678.t1 AT3G15120 31.220 205 124 8 145 347 712 901 5.35e-11 65.9
MS.gene70678.t1 AT1G03000 35.570 149 77 5 191 336 694 826 8.00e-11 65.1

Find 105 sgRNAs with CRISPR-Local

Find 437 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACCATTTCTTGAATCTTT+TGG 0.163133 3.3:+65413098 None:intergenic
CACATTCTTTGTTCAGTAAA+TGG 0.170120 3.3:-65415005 MS.gene70678:CDS
GCCTGTAGTACATGTCTTTC+AGG 0.195452 3.3:-65416547 MS.gene70678:intron
TTAGACCAGATTCATATATT+AGG 0.259717 3.3:+65415544 None:intergenic
CCGAACCTTCTGATTCTATT+CGG 0.296498 3.3:-65412908 MS.gene70678:CDS
GTGGTTAGAATTATCACATT+TGG 0.315571 3.3:+65412662 None:intergenic
CTTCCTGCAAAAGAATTTGA+TGG 0.316919 3.3:-65415678 MS.gene70678:CDS
CGAACCTTCTGATTCTATTC+GGG 0.329197 3.3:-65412907 MS.gene70678:intron
GGGAAGCTACGGCGCCGTTT+TGG 0.331773 3.3:+65417634 None:intergenic
TTGATCCATTCCTTGTTTCA+TGG 0.336034 3.3:-65415467 MS.gene70678:CDS
AGAATTTGCGTTTGTGATAC+AGG 0.336533 3.3:-65417125 MS.gene70678:intron
CATTCCTTGTTTCATGGAAC+CGG 0.365098 3.3:-65415461 MS.gene70678:intron
AAGAGGAGTTTGAGCTATAA+TGG 0.374339 3.3:-65417200 MS.gene70678:CDS
TGCAGCCTAATATATGAATC+TGG 0.381687 3.3:-65415549 MS.gene70678:intron
TTTCCAAAAGATTCAAGAAA+TGG 0.384973 3.3:-65413101 MS.gene70678:CDS
GCATACCAACTTCCCACTTT+CGG 0.390510 3.3:+65414978 None:intergenic
AAGCCCGGTATGAAATATTA+AGG 0.392685 3.3:-65412091 MS.gene70678:CDS
GTAGTAGCTTCATGAAAATC+TGG 0.399069 3.3:+65411835 None:intergenic
TCGTCAAGGGGAACGGGAAT+CGG 0.406300 3.3:+65417173 None:intergenic
TTGCACATTATCTGCAAGAA+AGG 0.411537 3.3:+65417148 None:intergenic
AGTAAATGGTTCTCCGAAAG+TGG 0.417358 3.3:-65414991 MS.gene70678:CDS
GCTAGAAAAGCTGCTTTGTC+TGG 0.421700 3.3:-65412933 MS.gene70678:CDS
TTGATAGGATTGCAATCAAA+AGG 0.427262 3.3:+65411608 None:intergenic
AGTCTTCTAGCTTCAATGAA+TGG 0.432368 3.3:-65415704 MS.gene70678:CDS
ATTGTACATAAGAACTTGAT+AGG 0.435567 3.3:+65411593 None:intergenic
CTTTGACAGCTTAGCGAAGA+AGG 0.439270 3.3:-65415756 MS.gene70678:intron
AAGGGTTCGTCAAGGGGAAC+GGG 0.442722 3.3:+65417167 None:intergenic
TGCTTTACTCTTCACTGAAA+AGG 0.448394 3.3:-65415493 MS.gene70678:CDS
CCGAATAGAATCAGAAGGTT+CGG 0.463353 3.3:+65412908 None:intergenic
GGTAGAGGAAGAAGGCAATC+TGG 0.464540 3.3:-65413080 MS.gene70678:CDS
CAATGCATTATTAACTCAGA+TGG 0.466410 3.3:-65412702 MS.gene70678:CDS
TCCTCCGGTGGAAGAGGAGG+AGG 0.471701 3.3:+65417585 None:intergenic
GATGTCCGTTCCGCCGTTGA+GGG 0.473816 3.3:-65417417 MS.gene70678:CDS
AAGCTTCGCTTACATTAGTC+AGG 0.476102 3.3:+65411536 None:intergenic
GTGCATTCACTTCAACAAGC+TGG 0.486304 3.3:+65415025 None:intergenic
TGCACATTATCTGCAAGAAA+GGG 0.489264 3.3:+65417149 None:intergenic
AATATTAAGGTCTTGTGTGC+AGG 0.492194 3.3:-65412078 MS.gene70678:CDS
CAATGCACCTCGAATTGAAT+CGG 0.492486 3.3:+65415149 None:intergenic
TCCGGTGGAAGAGGAGGAGG+GGG 0.493517 3.3:+65417588 None:intergenic
AAGACCTTAATATTTCATAC+CGG 0.493523 3.3:+65412087 None:intergenic
TCATACCGGGCTTGAAGAGT+TGG 0.496365 3.3:+65412101 None:intergenic
ATCGTGAATTGAAGCTGTGC+TGG 0.497938 3.3:+65417437 None:intergenic
TGTCAATCCGATTCAATTCG+AGG 0.498172 3.3:-65415156 MS.gene70678:intron
AAAGGGTTCGTCAAGGGGAA+CGG 0.504383 3.3:+65417166 None:intergenic
TGGTGGTAGAGGTGAACGTT+GGG 0.507649 3.3:+65417614 None:intergenic
TACCGGGCTTGAAGAGTTGG+TGG 0.509140 3.3:+65412104 None:intergenic
CGATGTCCGTTCCGCCGTTG+AGG 0.509936 3.3:-65417418 MS.gene70678:CDS
GTGCAGGAACTTATGCGTAC+AGG 0.512151 3.3:-65412062 MS.gene70678:CDS
TGCAAGAAAGGGTTCGTCAA+GGG 0.514065 3.3:+65417160 None:intergenic
AACCCTACGACCGACCAAAA+CGG 0.518371 3.3:-65417648 MS.gene70678:CDS
TGCATTCACTTCAACAAGCT+GGG 0.518386 3.3:+65415026 None:intergenic
ACCTGAAAGACATGTACTAC+AGG 0.522775 3.3:+65416546 None:intergenic
GTCTAAAGCAAAGGTTGCTA+CGG 0.528357 3.3:-65415527 MS.gene70678:CDS
AATTTGATGGCATGTGGGAA+AGG 0.528949 3.3:-65415665 MS.gene70678:intron
ATCTGTCCACAGGGAATGAG+TGG 0.529805 3.3:-65411680 MS.gene70678:intron
AAAGACGTCTTTCCAGTCCC+AGG 0.535392 3.3:+65415202 None:intergenic
CAAGAAATGGTAGAGGAAGA+AGG 0.537039 3.3:-65413088 MS.gene70678:CDS
ATGGTGGTAGAGGTGAACGT+TGG 0.542015 3.3:+65417613 None:intergenic
CTTCAACAAGCTGGGCCTGT+GGG 0.542287 3.3:+65415034 None:intergenic
GTTCTCCGAAAGTGGGAAGT+TGG 0.542553 3.3:-65414983 MS.gene70678:intron
AGGTGAACGTTGGGAAGCTA+CGG 0.544888 3.3:+65417623 None:intergenic
GCCCACCAACTCTTCAAGCC+CGG 0.546674 3.3:-65412106 MS.gene70678:CDS
TCCAACATTACTGCTGCTAT+CGG 0.546949 3.3:-65412638 MS.gene70678:intron
CCCTCCTCCTCTTCCACCGG+AGG 0.551215 3.3:-65417586 MS.gene70678:CDS
TTTCCCACTCAGATTCCCAC+AGG 0.553521 3.3:-65415049 MS.gene70678:intron
ATTCATTGAAGCTAGAAGAC+TGG 0.559709 3.3:+65415706 None:intergenic
ACTTCAACAAGCTGGGCCTG+TGG 0.562535 3.3:+65415033 None:intergenic
TGCAGGAACTTATGCGTACA+GGG 0.563349 3.3:-65412061 MS.gene70678:CDS
ATTACCCCTCAACGGCGGAA+CGG 0.564389 3.3:+65417412 None:intergenic
ACCGATAGCAGCAGTAATGT+TGG 0.565609 3.3:+65412637 None:intergenic
ATGTCCGTTCCGCCGTTGAG+GGG 0.566371 3.3:-65417416 MS.gene70678:intron
CGGTTCCATGAAACAAGGAA+TGG 0.570883 3.3:+65415462 None:intergenic
CTCCGGTGGAAGAGGAGGAG+GGG 0.573112 3.3:+65417587 None:intergenic
GCTGATATCAAAGCATATGT+TGG 0.577084 3.3:-65412128 MS.gene70678:CDS
AAAGATTCAAGAAATGGTAG+AGG 0.577519 3.3:-65413095 MS.gene70678:CDS
AGCAGCAGTAATGTTGGATG+TGG 0.577677 3.3:+65412643 None:intergenic
CCTCCGGTGGAAGAGGAGGA+GGG 0.577752 3.3:+65417586 None:intergenic
TGTGAGGATATCAGCTCTGA+TGG 0.579798 3.3:-65415729 MS.gene70678:CDS
GCAAGAAAGGGTTCGTCAAG+GGG 0.584552 3.3:+65417161 None:intergenic
CAAAAGAATTTGATGGCATG+TGG 0.585350 3.3:-65415671 MS.gene70678:CDS
ATGAATCTGGTCTAAAGCAA+AGG 0.586924 3.3:-65415536 MS.gene70678:CDS
AGACCTTAATATTTCATACC+GGG 0.587758 3.3:+65412088 None:intergenic
TTTACCCGAATAGAATCAGA+AGG 0.588127 3.3:+65412903 None:intergenic
GTCCACAGGGAATGAGTGGA+AGG 0.588613 3.3:-65411676 MS.gene70678:intron
AATGATAGATACAGCAAAGA+GGG 0.590323 3.3:-65411573 MS.gene70678:CDS
AAGACGTCTTTCCAGTCCCA+GGG 0.593674 3.3:+65415203 None:intergenic
GAGGATAAAATTCTCGTCCC+TGG 0.601718 3.3:-65417567 MS.gene70678:intron
TTCTCCTACTCCAATGGAGA+CGG 0.603433 3.3:-65417676 None:intergenic
TTATCCTCCGGTGGAAGAGG+AGG 0.607446 3.3:+65417582 None:intergenic
CTGCAAGAAAGGGTTCGTCA+AGG 0.618408 3.3:+65417159 None:intergenic
GTAAATGGTTCTCCGAAAGT+GGG 0.626891 3.3:-65414990 MS.gene70678:CDS
CTCACCGGTTCCATGAAACA+AGG 0.629691 3.3:+65415457 None:intergenic
TGAAACTGCAGAGGCATGTG+AGG 0.639294 3.3:-65411785 MS.gene70678:intron
GAAATTAGTTGAAACTGCAG+AGG 0.644635 3.3:-65411794 MS.gene70678:CDS
TAGCGAAGAAGGACCGTGTG+AGG 0.645973 3.3:-65415745 MS.gene70678:CDS
TGAATTGAAGCTGTGCTGGA+AGG 0.649944 3.3:+65417441 None:intergenic
ACCGGGCTTGAAGAGTTGGT+GGG 0.651440 3.3:+65412105 None:intergenic
AAAAGAATTTGATGGCATGT+GGG 0.664280 3.3:-65415670 MS.gene70678:CDS
AGGAGTTTGAGCTATAATGG+TGG 0.669249 3.3:-65417197 MS.gene70678:CDS
CAATGATAGATACAGCAAAG+AGG 0.670119 3.3:-65411574 MS.gene70678:CDS
GATAGATTATTACCCCTCAA+CGG 0.678759 3.3:+65417404 None:intergenic
AGACGTCTTTCCAGTCCCAG+GGG 0.712576 3.3:+65415204 None:intergenic
GACGTCTTTCCAGTCCCAGG+GGG 0.718244 3.3:+65415205 None:intergenic
AGATTATTACCCCTCAACGG+CGG 0.725535 3.3:+65417407 None:intergenic
TCAGAGCTGATATCCTCACA+CGG 0.742150 3.3:+65415732 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTATTTTTAAAAA+GGG - chr3.3:65415376-65415395 MS.gene70678:intron 0.0%
!!! TATTTTTTTTATTTTTAAAA+AGG - chr3.3:65415375-65415394 MS.gene70678:intron 0.0%
!!! TTTTTTTTTTTTTTTTTTAT+AGG - chr3.3:65412598-65412617 MS.gene70678:intron 0.0%
!! TAATAATAAGATGTAATAAA+TGG + chr3.3:65414964-65414983 None:intergenic 10.0%
!!! ACTAATTTTAATTATTCTAT+CGG - chr3.3:65411933-65411952 MS.gene70678:intron 10.0%
!!! ATATGTATTTATTTTTGTAT+TGG - chr3.3:65413787-65413806 MS.gene70678:intron 10.0%
!! AAAGTGAAATATATTGTATT+GGG + chr3.3:65413233-65413252 None:intergenic 15.0%
!! AACTATCAATATCATATTTA+TGG + chr3.3:65416671-65416690 None:intergenic 15.0%
!! ACTATCAATATCATATTTAT+GGG + chr3.3:65416670-65416689 None:intergenic 15.0%
!! GTTTCAAATGAAAATATATT+GGG + chr3.3:65416996-65417015 None:intergenic 15.0%
!! TAAAGTGAAATATATTGTAT+TGG + chr3.3:65413234-65413253 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr3.3:65413193-65413212 None:intergenic 15.0%
!! TGTATTAAAAAGCAAAAAAA+TGG - chr3.3:65414886-65414905 MS.gene70678:intron 15.0%
!! TTTCAAATGAAAATATATTG+GGG + chr3.3:65416995-65417014 None:intergenic 15.0%
!!! AAAAAAAAAAGTATACCAAA+TGG - chr3.3:65415698-65415717 MS.gene70678:CDS 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + chr3.3:65413257-65413276 None:intergenic 15.0%
!!! AATTTTTATCCATCATATAA+AGG + chr3.3:65414638-65414657 None:intergenic 15.0%
!!! ATTTTAGTTTGTTAATCTAA+TGG - chr3.3:65417276-65417295 MS.gene70678:intron 15.0%
!!! CTAATTTTAATTATTCTATC+GGG - chr3.3:65411934-65411953 MS.gene70678:intron 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + chr3.3:65413258-65413277 None:intergenic 15.0%
!!! TTATTTTGTTATAGTTTCTA+GGG - chr3.3:65411843-65411862 MS.gene70678:CDS 15.0%
!!! TTTATTTTCAATTGTTTGTA+TGG - chr3.3:65412125-65412144 MS.gene70678:CDS 15.0%
!!! TTTATTTTGTTATAGTTTCT+AGG - chr3.3:65411842-65411861 MS.gene70678:CDS 15.0%
!!! TTTTTTTTTTTATAGGTGAA+GGG - chr3.3:65412605-65412624 MS.gene70678:intron 15.0%
!!! TTTTTTTTTTTTATAGGTGA+AGG - chr3.3:65412604-65412623 MS.gene70678:intron 15.0%
!! AAATACATGTGATTAAACAT+AGG + chr3.3:65415669-65415688 None:intergenic 20.0%
!! AAATATCAAGATATGTTCAT+AGG + chr3.3:65413946-65413965 None:intergenic 20.0%
!! AGCTTCAATGTTTATTATAT+TGG - chr3.3:65414339-65414358 MS.gene70678:intron 20.0%
!! ATATATTCAATGAGCATATA+TGG - chr3.3:65412778-65412797 MS.gene70678:intron 20.0%
!! ATTACATCTTATTATTAGTC+TGG - chr3.3:65414967-65414986 MS.gene70678:intron 20.0%
!! ATTGAAAACAAGTAAATGAA+GGG - chr3.3:65414119-65414138 MS.gene70678:intron 20.0%
!! CGTTTCAAATGAAAATATAT+TGG + chr3.3:65416997-65417016 None:intergenic 20.0%
!! TAAATGACCGTAAAAAAAAA+GGG - chr3.3:65416774-65416793 MS.gene70678:intron 20.0%
!! TATAAGAGAAACTATTAAGA+AGG + chr3.3:65415250-65415269 None:intergenic 20.0%
!! TGAATTTATGATAATTCAAC+TGG - chr3.3:65411972-65411991 MS.gene70678:intron 20.0%
!! TGATACTATTAAGAGATTAT+TGG + chr3.3:65415923-65415942 None:intergenic 20.0%
!! TTAAATGACCGTAAAAAAAA+AGG - chr3.3:65416773-65416792 MS.gene70678:intron 20.0%
!! TTCTATCATAAACCATATTT+CGG - chr3.3:65415202-65415221 MS.gene70678:CDS 20.0%
!!! ATAGAAATTGATTTTCTTTG+TGG - chr3.3:65411869-65411888 MS.gene70678:CDS 20.0%
!!! GAACATATCTTGATATTTTT+AGG - chr3.3:65413948-65413967 MS.gene70678:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+AGG + chr3.3:65413123-65413142 None:intergenic 20.0%
!!! TCACTTTAAACGATTTTTTT+TGG - chr3.3:65412368-65412387 MS.gene70678:intron 20.0%
!!! TGATTTTATTGCTATCATTA+TGG - chr3.3:65412159-65412178 MS.gene70678:intron 20.0%
!!! TTTGTGTTTTTAAATCCAAA+AGG - chr3.3:65412816-65412835 MS.gene70678:intron 20.0%
!!! TTTTGGATTTAAAAACACAA+AGG + chr3.3:65412817-65412836 None:intergenic 20.0%
! AAATATTATCCAGGGAAAAA+TGG + chr3.3:65415770-65415789 None:intergenic 25.0%
! AACATGCATATAGTAAACAA+AGG - chr3.3:65413043-65413062 MS.gene70678:intron 25.0%
! AAGACCTTAATATTTCATAC+CGG + chr3.3:65417129-65417148 None:intergenic 25.0%
! AATCACTAAATCCTCATTAA+GGG + chr3.3:65416755-65416774 None:intergenic 25.0%
! AATTACATGTATCATTTAGG+TGG - chr3.3:65415848-65415867 MS.gene70678:intron 25.0%
! AATTGGAATCTATAGAATAG+AGG + chr3.3:65411699-65411718 None:intergenic 25.0%
! ACAGAGATTAATAAGTCAAT+TGG - chr3.3:65415981-65416000 MS.gene70678:intron 25.0%
! ACGAAAATTAGTTGAGAAAT+TGG + chr3.3:65411716-65411735 None:intergenic 25.0%
! ACTACCATACTAACAATAAA+TGG - chr3.3:65415296-65415315 MS.gene70678:intron 25.0%
! AGATTATTGGACTATAGTTA+AGG + chr3.3:65415910-65415929 None:intergenic 25.0%
! ATATGATTATGGTAGTACAT+AGG + chr3.3:65415113-65415132 None:intergenic 25.0%
! ATATTAGTCAAGCAAAGATA+TGG + chr3.3:65412762-65412781 None:intergenic 25.0%
! ATCAAGAAAACTATAGTTGA+GGG + chr3.3:65413602-65413621 None:intergenic 25.0%
! ATGAACAGAAAATATTATCC+AGG + chr3.3:65415779-65415798 None:intergenic 25.0%
! ATGACAGAAACTTAAAGTAA+AGG + chr3.3:65414268-65414287 None:intergenic 25.0%
! ATGTGCTTTATGTTAAAGTA+AGG + chr3.3:65416895-65416914 None:intergenic 25.0%
! ATTACATGTATCATTTAGGT+GGG - chr3.3:65415849-65415868 MS.gene70678:intron 25.0%
! ATTGTACATAAGAACTTGAT+AGG + chr3.3:65417623-65417642 None:intergenic 25.0%
! CAATCTGAATATTCAATTTC+AGG - chr3.3:65416484-65416503 MS.gene70678:intron 25.0%
! CATTGAAAACAAGTAAATGA+AGG - chr3.3:65414118-65414137 MS.gene70678:intron 25.0%
! GATTATTGGACTATAGTTAA+GGG + chr3.3:65415909-65415928 None:intergenic 25.0%
! TAATAAACATTGAAGCTAGT+AGG + chr3.3:65414336-65414355 None:intergenic 25.0%
! TAATCACTAAATCCTCATTA+AGG + chr3.3:65416756-65416775 None:intergenic 25.0%
! TAGCAATTAGTATGTCAATA+TGG - chr3.3:65412468-65412487 MS.gene70678:intron 25.0%
! TATCAAGAAAACTATAGTTG+AGG + chr3.3:65413603-65413622 None:intergenic 25.0%
! TGAACAGAAAATATTATCCA+GGG + chr3.3:65415778-65415797 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG + chr3.3:65415197-65415216 None:intergenic 25.0%
! TTAGACCAGATTCATATATT+AGG + chr3.3:65413672-65413691 None:intergenic 25.0%
! TTCTTGTATAACGAAATAAG+TGG - chr3.3:65415466-65415485 MS.gene70678:CDS 25.0%
! TTTCCAAAAGATTCAAGAAA+TGG - chr3.3:65416112-65416131 MS.gene70678:intron 25.0%
!! AGGGATATTAACTAATTTTG+AGG - chr3.3:65417171-65417190 MS.gene70678:CDS 25.0%
!! ATAAAAGCGTGAATTACAAA+AGG + chr3.3:65414311-65414330 None:intergenic 25.0%
!! ATTTTCAATTGTTTGTATGG+TGG - chr3.3:65412128-65412147 MS.gene70678:CDS 25.0%
!! GATCATGAAGAAACTATTTT+AGG + chr3.3:65416967-65416986 None:intergenic 25.0%
!! GTTGTTGTTCTATATGATTA+TGG + chr3.3:65415124-65415143 None:intergenic 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - chr3.3:65415258-65415277 MS.gene70678:intron 25.0%
!! TATCATTTGACTATCTGTTT+TGG - chr3.3:65415938-65415957 MS.gene70678:intron 25.0%
!! TTCATTTTCGAAAAAGATTC+CGG + chr3.3:65417220-65417239 None:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG + chr3.3:65413146-65413165 None:intergenic 25.0%
!! TTGATAGTTAATATGCTTCA+TGG + chr3.3:65415569-65415588 None:intergenic 25.0%
!!! AAACTATTTTAGGAAGACAT+TGG + chr3.3:65416957-65416976 None:intergenic 25.0%
!!! AATCTGGTATTTGTTTTGAT+CGG - chr3.3:65416149-65416168 MS.gene70678:intron 25.0%
!!! ACTATCTGTTTTGGAATTTA+AGG - chr3.3:65415947-65415966 MS.gene70678:intron 25.0%
!!! ATTTTCTTTTTCATCCTGTA+TGG + chr3.3:65415350-65415369 None:intergenic 25.0%
!!! CTTTTGTTACTTTCTCTTTT+CGG + chr3.3:65413010-65413029 None:intergenic 25.0%
!!! GAATCTTTTTCGAAAATGAA+AGG - chr3.3:65417220-65417239 MS.gene70678:intron 25.0%
!!! GAGTAATTTTGACTAAATGT+GGG - chr3.3:65412390-65412409 MS.gene70678:intron 25.0%
!!! GATAATTCAACTGGTTTTTT+AGG - chr3.3:65411981-65412000 MS.gene70678:intron 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG + chr3.3:65413145-65413164 None:intergenic 25.0%
!!! TTTGATTTTACGTTTACTCA+CGG - chr3.3:65412281-65412300 MS.gene70678:intron 25.0%
!!! TTTTCTTTTTCATCCTGTAT+GGG + chr3.3:65415349-65415368 None:intergenic 25.0%
AAAAGGTGATAAGCTTCAAT+TGG - chr3.3:65412833-65412852 MS.gene70678:intron 30.0%
AAACACAAAGGAAAAACCAT+AGG + chr3.3:65412805-65412824 None:intergenic 30.0%
AAAGATTCAAGAAATGGTAG+AGG - chr3.3:65416118-65416137 MS.gene70678:intron 30.0%
AAATTCTAACTACCAAACAG+TGG + chr3.3:65414491-65414510 None:intergenic 30.0%
AATGATAGATACAGCAAAGA+GGG - chr3.3:65417640-65417659 MS.gene70678:CDS 30.0%
AATTCTAACTACCAAACAGT+GGG + chr3.3:65414490-65414509 None:intergenic 30.0%
ACACAACAAAACTACAACTT+TGG + chr3.3:65416048-65416067 None:intergenic 30.0%
ACATCATAAGACAGTCTTAA+TGG + chr3.3:65412260-65412279 None:intergenic 30.0%
ACTAAGCAAAGTACAATTAG+AGG + chr3.3:65413377-65413396 None:intergenic 30.0%
AGAAAATAGGTCAGTTATTC+CGG + chr3.3:65413110-65413129 None:intergenic 30.0%
AGAAGTGATGACTTCTTTAT+GGG - chr3.3:65416441-65416460 MS.gene70678:intron 30.0%
AGACCTTAATATTTCATACC+GGG + chr3.3:65417128-65417147 None:intergenic 30.0%
AGTATGTCAATATGGAAGAT+AGG - chr3.3:65412476-65412495 MS.gene70678:intron 30.0%
AGTTGTGATCACAACATATA+AGG + chr3.3:65413813-65413832 None:intergenic 30.0%
ATCTCTTTGTTCTGTTAATG+TGG - chr3.3:65413402-65413421 MS.gene70678:intron 30.0%
ATGAAAATATATTGGGGAAG+TGG + chr3.3:65416989-65417008 None:intergenic 30.0%
ATGGGTGTCTGTAATAATAT+GGG - chr3.3:65416459-65416478 MS.gene70678:intron 30.0%
CAAAACACTTTATCAATGCA+CGG + chr3.3:65414770-65414789 None:intergenic 30.0%
CAATGCATTATTAACTCAGA+TGG - chr3.3:65416511-65416530 MS.gene70678:intron 30.0%
CACATTCTTTGTTCAGTAAA+TGG - chr3.3:65414208-65414227 MS.gene70678:intron 30.0%
CAGCAGTTATTGAGAAATAA+CGG + chr3.3:65417507-65417526 None:intergenic 30.0%
CCATCATATAAAGGTAGAAT+GGG + chr3.3:65414629-65414648 None:intergenic 30.0%
CTAAGCAAAGTACAATTAGA+GGG + chr3.3:65413376-65413395 None:intergenic 30.0%
CTTTAACTATTAGCTAGCAT+TGG - chr3.3:65414586-65414605 MS.gene70678:intron 30.0%
GAAGCATATTAACTATCAAG+AGG - chr3.3:65415570-65415589 MS.gene70678:intron 30.0%
GAATGATGAGAAAGTGATAT+AGG + chr3.3:65416605-65416624 None:intergenic 30.0%
GGAAAAAAAGATAACACTTG+TGG - chr3.3:65417453-65417472 MS.gene70678:CDS 30.0%
GTCTTAATGGAACTTTAGAT+TGG + chr3.3:65412247-65412266 None:intergenic 30.0%
GTGGTTAGAATTATCACATT+TGG + chr3.3:65416554-65416573 None:intergenic 30.0%
GTTTATTATATTGGTGAGCT+TGG - chr3.3:65414348-65414367 MS.gene70678:intron 30.0%
TAATGGGGGAAGTTTATTAT+GGG + chr3.3:65412911-65412930 None:intergenic 30.0%
TAGACTGATGTATAATGACA+AGG + chr3.3:65416702-65416721 None:intergenic 30.0%
TATGGGTGTCTGTAATAATA+TGG - chr3.3:65416458-65416477 MS.gene70678:intron 30.0%
TATTGTTAGTATGGTAGTAG+AGG + chr3.3:65415294-65415313 None:intergenic 30.0%
TCCATCATATAAAGGTAGAA+TGG + chr3.3:65414630-65414649 None:intergenic 30.0%
TCTTAGAGGATTATTATGCT+GGG - chr3.3:65414683-65414702 MS.gene70678:intron 30.0%
TCTTTAACCTCACAATCTTT+AGG - chr3.3:65417477-65417496 MS.gene70678:intron 30.0%
TGATCAGTCTATATTGTCTA+GGG + chr3.3:65412537-65412556 None:intergenic 30.0%
TGTGTCTTCAAACATAAAGT+TGG + chr3.3:65414662-65414681 None:intergenic 30.0%
TTATTGCTATCATTATGGAG+TGG - chr3.3:65412164-65412183 MS.gene70678:intron 30.0%
TTCAGGAAAAATAGGTTCAT+CGG - chr3.3:65414808-65414827 MS.gene70678:intron 30.0%
TTCATTGTGATTGGTACTTT+CGG - chr3.3:65414920-65414939 MS.gene70678:intron 30.0%
TTCTCAATTTCACGACAAAA+GGG + chr3.3:65412325-65412344 None:intergenic 30.0%
TTCTTAGAGGATTATTATGC+TGG - chr3.3:65414682-65414701 MS.gene70678:intron 30.0%
TTGATAGGATTGCAATCAAA+AGG + chr3.3:65417608-65417627 None:intergenic 30.0%
TTGATATCAAGCTTGATCAA+AGG - chr3.3:65414436-65414455 MS.gene70678:intron 30.0%
TTGATCAGTCTATATTGTCT+AGG + chr3.3:65412538-65412557 None:intergenic 30.0%
! AAAACCTTTTTCCACTAGTT+AGG - chr3.3:65416922-65416941 MS.gene70678:intron 30.0%
! AAAAGAATTTGATGGCATGT+GGG - chr3.3:65413543-65413562 MS.gene70678:intron 30.0%
! AACAGGATTTTCATATCTTC+TGG + chr3.3:65414517-65414536 None:intergenic 30.0%
! AATTGAAGCTTATCACCTTT+TGG + chr3.3:65412834-65412853 None:intergenic 30.0%
! ACTGCCATTTATTGTTAGTA+TGG + chr3.3:65415303-65415322 None:intergenic 30.0%
! ATCGCATTTTCAAAAAATCG+TGG + chr3.3:65416380-65416399 None:intergenic 30.0%
! CAAATGTGTATGCTTTTGTA+TGG + chr3.3:65414848-65414867 None:intergenic 30.0%
! CATTTTGCTTATTATAGTCG+AGG - chr3.3:65411738-65411757 MS.gene70678:intron 30.0%
! CTACCATTTCTTGAATCTTT+TGG + chr3.3:65416118-65416137 None:intergenic 30.0%
! GTAGAGATACGATATTTTTC+AGG + chr3.3:65413856-65413875 None:intergenic 30.0%
! TCATTTTCGAAAAAGATTCC+GGG + chr3.3:65417219-65417238 None:intergenic 30.0%
! TCGCATTTTCAAAAAATCGT+GGG + chr3.3:65416379-65416398 None:intergenic 30.0%
! TGTTTTGCACTAGCATAATT+TGG + chr3.3:65417345-65417364 None:intergenic 30.0%
!! ATGATAACGTTCTTTTGTTC+TGG - chr3.3:65412635-65412654 MS.gene70678:intron 30.0%
!! TATTTTTAAAAAGGGCAACC+AGG - chr3.3:65415384-65415403 MS.gene70678:intron 30.0%
!!! AAAGTGTTTTGATTTCCTGT+GGG - chr3.3:65414779-65414798 MS.gene70678:intron 30.0%
!!! ACTAATTTTGAGGTACAGAT+AGG - chr3.3:65417181-65417200 MS.gene70678:CDS 30.0%
!!! ATTATTAGTCTGGTTTTGCA+AGG - chr3.3:65414977-65414996 MS.gene70678:intron 30.0%
!!! GGAGTAATTTTGACTAAATG+TGG - chr3.3:65412389-65412408 MS.gene70678:intron 30.0%
!!! GTGCATTCCCTTTTTTTTTA+CGG + chr3.3:65416784-65416803 None:intergenic 30.0%
!!! TAAAGTGTTTTGATTTCCTG+TGG - chr3.3:65414778-65414797 MS.gene70678:intron 30.0%
!!! TTTTTAGGATGCTTGAAAAG+AGG - chr3.3:65411996-65412015 MS.gene70678:intron 30.0%
AACACCATCTTCATTGTGAT+TGG - chr3.3:65414911-65414930 MS.gene70678:intron 35.0%
AAGAGGAGTTTGAGCTATAA+TGG - chr3.3:65412013-65412032 MS.gene70678:intron 35.0%
AAGCAAAGATATGGCAACTT+AGG + chr3.3:65412753-65412772 None:intergenic 35.0%
AAGCCCGGTATGAAATATTA+AGG - chr3.3:65417122-65417141 MS.gene70678:intron 35.0%
AATGAGCATATATGGTCCTA+TGG - chr3.3:65412786-65412805 MS.gene70678:intron 35.0%
ACACAATAGATTACCCATAC+AGG - chr3.3:65415333-65415352 MS.gene70678:intron 35.0%
AGAACAGCAGATAACTTACA+AGG + chr3.3:65416645-65416664 None:intergenic 35.0%
AGAATTTGCGTTTGTGATAC+AGG - chr3.3:65412088-65412107 MS.gene70678:CDS 35.0%
AGTACCAATCACAATGAAGA+TGG + chr3.3:65414918-65414937 None:intergenic 35.0%
ATATTAGGCTGCAAAAGCAA+TGG + chr3.3:65413657-65413676 None:intergenic 35.0%
ATCAAGCTTGATCAAAGGAT+TGG - chr3.3:65414441-65414460 MS.gene70678:intron 35.0%
ATGTTTGCAGTATCCATAGT+AGG + chr3.3:65415733-65415752 None:intergenic 35.0%
ATTCATTGAAGCTAGAAGAC+TGG + chr3.3:65413510-65413529 None:intergenic 35.0%
CAAAGTAGGTCAATTAAACC+GGG - chr3.3:65413293-65413312 MS.gene70678:intron 35.0%
CAATCAGTTTCACGTTATGT+GGG - chr3.3:65414371-65414390 MS.gene70678:intron 35.0%
CAATGATAGATACAGCAAAG+AGG - chr3.3:65417639-65417658 MS.gene70678:CDS 35.0%
CAGAAGTGATGACTTCTTTA+TGG - chr3.3:65416440-65416459 MS.gene70678:intron 35.0%
CAGGATAAAGATGGCAAAAA+AGG + chr3.3:65414731-65414750 None:intergenic 35.0%
CCAAAGTAGGTCAATTAAAC+CGG - chr3.3:65413292-65413311 MS.gene70678:intron 35.0%
CCCATTCTACCTTTATATGA+TGG - chr3.3:65414626-65414645 MS.gene70678:intron 35.0%
CTTCCTGCAAAAGAATTTGA+TGG - chr3.3:65413535-65413554 MS.gene70678:intron 35.0%
CTTCTCAATTTCACGACAAA+AGG + chr3.3:65412326-65412345 None:intergenic 35.0%
GAAAATAGGTCAGTTATTCC+GGG + chr3.3:65413109-65413128 None:intergenic 35.0%
GAAATTAGTTGAAACTGCAG+AGG - chr3.3:65417419-65417438 MS.gene70678:CDS 35.0%
GAAGATAAGATTAGAGAGAG+TGG + chr3.3:65411677-65411696 None:intergenic 35.0%
GATAGATTATTACCCCTCAA+CGG + chr3.3:65411812-65411831 None:intergenic 35.0%
GCTGATATCAAAGCATATGT+TGG - chr3.3:65417085-65417104 MS.gene70678:intron 35.0%
GGATTTAGAGATTACTGAGT+TGG + chr3.3:65415229-65415248 None:intergenic 35.0%
GTAGTAGCTTCATGAAAATC+TGG + chr3.3:65417381-65417400 None:intergenic 35.0%
GTATCCATAGTAGGATTATG+TGG + chr3.3:65415724-65415743 None:intergenic 35.0%
GTTTGAAGACACATTCTTAG+AGG - chr3.3:65414669-65414688 MS.gene70678:intron 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - chr3.3:65413279-65413298 MS.gene70678:intron 35.0%
TGCACATTATCTGCAAGAAA+GGG + chr3.3:65412067-65412086 None:intergenic 35.0%
TGCAGCCTAATATATGAATC+TGG - chr3.3:65413664-65413683 MS.gene70678:intron 35.0%
TGCTTTACTCTTCACTGAAA+AGG - chr3.3:65413720-65413739 MS.gene70678:intron 35.0%
TGTTATTGTTTGTCTGATGC+TGG + chr3.3:65416853-65416872 None:intergenic 35.0%
TGTTCCTAACTAGTGGAAAA+AGG + chr3.3:65416929-65416948 None:intergenic 35.0%
TTATCTCTCATGAGACTGTA+TGG + chr3.3:65412886-65412905 None:intergenic 35.0%
TTGCACATTATCTGCAAGAA+AGG + chr3.3:65412068-65412087 None:intergenic 35.0%
TTGTTGTGTCAAATGCGTAA+CGG - chr3.3:65416059-65416078 MS.gene70678:intron 35.0%
TTTACCCGAATAGAATCAGA+AGG + chr3.3:65416313-65416332 None:intergenic 35.0%
TTTCGTTATACAAGAATCCC+TGG + chr3.3:65415462-65415481 None:intergenic 35.0%
TTTGACTAAATGTGGGAATC+TGG - chr3.3:65412397-65412416 MS.gene70678:intron 35.0%
! AATATTAAGGTCTTGTGTGC+AGG - chr3.3:65417135-65417154 MS.gene70678:CDS 35.0%
! AATGGATAATCATGCTGACT+TGG - chr3.3:65417294-65417313 MS.gene70678:intron 35.0%
! ATATCAATTTGAAGCGACAC+GGG + chr3.3:65414423-65414442 None:intergenic 35.0%
! ATGAATCTGGTCTAAAGCAA+AGG - chr3.3:65413677-65413696 MS.gene70678:intron 35.0%
! ATGCCATCAAATTCTTTTGC+AGG + chr3.3:65413541-65413560 None:intergenic 35.0%
! ATGTGTATGCTTTTGTATGG+CGG + chr3.3:65414845-65414864 None:intergenic 35.0%
! ATTTTCAAAAAATCGTGGGG+AGG + chr3.3:65416375-65416394 None:intergenic 35.0%
! CAAAAGAATTTGATGGCATG+TGG - chr3.3:65413542-65413561 MS.gene70678:intron 35.0%
! CGCATTTTCAAAAAATCGTG+GGG + chr3.3:65416378-65416397 None:intergenic 35.0%
! GATATCAATTTGAAGCGACA+CGG + chr3.3:65414424-65414443 None:intergenic 35.0%
! GTAATGGGGGAAGTTTATTA+TGG + chr3.3:65412912-65412931 None:intergenic 35.0%
! TCTCAGAAAGCTTCCATTTT+TGG - chr3.3:65417562-65417581 MS.gene70678:intron 35.0%
! TGCAGCATAATTCTTTTGCA+TGG - chr3.3:65413984-65414003 MS.gene70678:intron 35.0%
! TGCTTATGTGTCGTTGTAAT+GGG + chr3.3:65412927-65412946 None:intergenic 35.0%
! TTGATCCATTCCTTGTTTCA+TGG - chr3.3:65413746-65413765 MS.gene70678:intron 35.0%
! TTGGATTGACTCAAATAGCT+AGG - chr3.3:65414460-65414479 MS.gene70678:intron 35.0%
! TTTTCAAAAAATCGTGGGGA+GGG + chr3.3:65416374-65416393 None:intergenic 35.0%
! TTTTGCAAGGCATACTGTAT+CGG - chr3.3:65414990-65415009 MS.gene70678:CDS 35.0%
!! AGTCTTCTAGCTTCAATGAA+TGG - chr3.3:65413509-65413528 MS.gene70678:intron 35.0%
!! ATAATCATGCTGACTTGGTT+AGG - chr3.3:65417299-65417318 MS.gene70678:intron 35.0%
!! ATTTTAGGAAGACATTGGAG+TGG + chr3.3:65416952-65416971 None:intergenic 35.0%
!! CTATTAGCTAGCATTGGTTA+AGG - chr3.3:65414592-65414611 MS.gene70678:intron 35.0%
!! TACATATCTCTAGAACTCAC+CGG + chr3.3:65413774-65413793 None:intergenic 35.0%
!!! ATGGGCATAACTTTTGAGTT+TGG - chr3.3:65414549-65414568 MS.gene70678:intron 35.0%
!!! CGGTGTCTCTTTATTTTTCT+AGG - chr3.3:65416079-65416098 MS.gene70678:intron 35.0%
!!! CTTTTTTGCCATCTTTATCC+TGG - chr3.3:65414729-65414748 MS.gene70678:intron 35.0%
!!! GTGGTTTTAGTTTTGTGTGA+GGG - chr3.3:65411888-65411907 MS.gene70678:CDS 35.0%
!!! TACTGTATCGGTTTTGACAT+TGG - chr3.3:65415002-65415021 MS.gene70678:CDS 35.0%
!!! TGGGCATAACTTTTGAGTTT+GGG - chr3.3:65414550-65414569 MS.gene70678:intron 35.0%
!!! TGGTTTTAGTTTTGTGTGAG+GGG - chr3.3:65411889-65411908 MS.gene70678:CDS 35.0%
!!! TGTGGTTTTAGTTTTGTGTG+AGG - chr3.3:65411887-65411906 MS.gene70678:CDS 35.0%
AAAAGTTATGCCCATACCAC+TGG + chr3.3:65414544-65414563 None:intergenic 40.0%
AAACCCTATCCCACTAAGTT+TGG - chr3.3:65415148-65415167 MS.gene70678:intron 40.0%
AAACTTAGTGGGATAGGGTT+TGG + chr3.3:65415149-65415168 None:intergenic 40.0%
AAAGCAATGGTAAATGGTGC+AGG + chr3.3:65413644-65413663 None:intergenic 40.0%
AAAGTTATGCCCATACCACT+GGG + chr3.3:65414543-65414562 None:intergenic 40.0%
AACAATAACATGCCTGGATC+TGG - chr3.3:65416863-65416882 MS.gene70678:intron 40.0%
AAGCAATGGTAAATGGTGCA+GGG + chr3.3:65413643-65413662 None:intergenic 40.0%
ACCTGAAAGACATGTACTAC+AGG + chr3.3:65412670-65412689 None:intergenic 40.0%
AGAGAGTTTATTCATGCAGG+GGG + chr3.3:65416351-65416370 None:intergenic 40.0%
AGGAGTTTGAGCTATAATGG+TGG - chr3.3:65412016-65412035 MS.gene70678:intron 40.0%
AGTAAATGGTTCTCCGAAAG+TGG - chr3.3:65414222-65414241 MS.gene70678:intron 40.0%
AGTAGGATTATGTGGCCATT+TGG + chr3.3:65415716-65415735 None:intergenic 40.0%
ATGGCCACATAATCCTACTA+TGG - chr3.3:65415717-65415736 MS.gene70678:CDS 40.0%
CAAGAAATGGTAGAGGAAGA+AGG - chr3.3:65416125-65416144 MS.gene70678:intron 40.0%
CAATGCACCTCGAATTGAAT+CGG + chr3.3:65414067-65414086 None:intergenic 40.0%
CAGAATCTGTAATCAGCTCA+TGG - chr3.3:65412945-65412964 MS.gene70678:CDS 40.0%
CAGACAAACAATAACATGCC+TGG - chr3.3:65416857-65416876 MS.gene70678:intron 40.0%
CATTATGGAGTGGCAAGATA+TGG - chr3.3:65412174-65412193 MS.gene70678:intron 40.0%
CCGAACCTTCTGATTCTATT+CGG - chr3.3:65416305-65416324 MS.gene70678:intron 40.0%
CCGAATAGAATCAGAAGGTT+CGG + chr3.3:65416308-65416327 None:intergenic 40.0%
CCGGTTTAATTGACCTACTT+TGG + chr3.3:65413295-65413314 None:intergenic 40.0%
CGAACCTTCTGATTCTATTC+GGG - chr3.3:65416306-65416325 MS.gene70678:intron 40.0%
CGTATAACTCAGCCATTGTT+TGG + chr3.3:65412431-65412450 None:intergenic 40.0%
GAAAATCCTGTTTATCCCAG+TGG - chr3.3:65414525-65414544 MS.gene70678:intron 40.0%
GAGAGAGTTTATTCATGCAG+GGG + chr3.3:65416352-65416371 None:intergenic 40.0%
GCAATCAGTTTCACGTTATG+TGG - chr3.3:65414370-65414389 MS.gene70678:intron 40.0%
GCTGCAAAAGCAATGGTAAA+TGG + chr3.3:65413650-65413669 None:intergenic 40.0%
GGAATCTGAGTGGGAAAAAA+TGG + chr3.3:65414161-65414180 None:intergenic 40.0%
GGAGAGAGTTTATTCATGCA+GGG + chr3.3:65416353-65416372 None:intergenic 40.0%
GGGATGATGTTGATGCATAA+TGG + chr3.3:65413356-65413375 None:intergenic 40.0%
GTAAATGGTTCTCCGAAAGT+GGG - chr3.3:65414223-65414242 MS.gene70678:intron 40.0%
GTAAGGTTAATTCCAGATCC+AGG + chr3.3:65416878-65416897 None:intergenic 40.0%
GTACATAGGTTCAGAGTTTC+AGG + chr3.3:65415099-65415118 None:intergenic 40.0%
GTATCATTTAGGTGGGCATT+TGG - chr3.3:65415856-65415875 MS.gene70678:intron 40.0%
TACCAAGTCCAGGATAAAGA+TGG + chr3.3:65414740-65414759 None:intergenic 40.0%
TAGAGGATTATTATGCTGGG+AGG - chr3.3:65414686-65414705 MS.gene70678:intron 40.0%
TCCAACATTACTGCTGCTAT+CGG - chr3.3:65416575-65416594 MS.gene70678:CDS 40.0%
TCTGAGTGGGAAAAAATGGT+AGG + chr3.3:65414157-65414176 None:intergenic 40.0%
TGATGCTGGATGGTTTCTTA+TGG - chr3.3:65415071-65415090 MS.gene70678:intron 40.0%
TGCATTCACTTCAACAAGCT+GGG + chr3.3:65414190-65414209 None:intergenic 40.0%
TGTAATCAGCTCATGGTAGA+AGG - chr3.3:65412952-65412971 MS.gene70678:CDS 40.0%
TGTCAATCCGATTCAATTCG+AGG - chr3.3:65414057-65414076 MS.gene70678:intron 40.0%
! AATTTGATGGCATGTGGGAA+AGG - chr3.3:65413548-65413567 MS.gene70678:intron 40.0%
! ACTGATCAATTGCTGCTTCT+CGG - chr3.3:65412549-65412568 MS.gene70678:intron 40.0%
! AGAAACCATTCTAGAAGCTG+TGG + chr3.3:65412985-65413004 None:intergenic 40.0%
! AGATCTAGCTTCCCTTAATG+AGG - chr3.3:65416741-65416760 MS.gene70678:intron 40.0%
! CATTCCTTGTTTCATGGAAC+CGG - chr3.3:65413752-65413771 MS.gene70678:intron 40.0%
! CTGCTTATGTGTCGTTGTAA+TGG + chr3.3:65412928-65412947 None:intergenic 40.0%
! CTTATGTGTCGTTGTAATGG+GGG + chr3.3:65412925-65412944 None:intergenic 40.0%
! GAAACCATTCTAGAAGCTGT+GGG + chr3.3:65412984-65413003 None:intergenic 40.0%
! GCTTATGTGTCGTTGTAATG+GGG + chr3.3:65412926-65412945 None:intergenic 40.0%
! GTCTAAAGCAAAGGTTGCTA+CGG - chr3.3:65413686-65413705 MS.gene70678:intron 40.0%
! TACTGAGTTGGACCGAAATA+TGG + chr3.3:65415217-65415236 None:intergenic 40.0%
! TGTGTATGCTTTTGTATGGC+GGG + chr3.3:65414844-65414863 None:intergenic 40.0%
!! GGAGGGTATTCAGGAAAAAT+AGG - chr3.3:65414800-65414819 MS.gene70678:intron 40.0%
!!! GGTATTTGTTTTGATCGGTG+AGG - chr3.3:65416154-65416173 MS.gene70678:intron 40.0%
!!! GGTTTTAGTTTTGTGTGAGG+GGG - chr3.3:65411890-65411909 MS.gene70678:CDS 40.0%
!!! TGTTTTGATTTCCTGTGGGA+GGG - chr3.3:65414783-65414802 MS.gene70678:intron 40.0%
AACCATTGAACCAACCACCA+GGG - chr3.3:65415442-65415461 MS.gene70678:intron 45.0%
AAGCAGAAGATGATGCTGGA+TGG - chr3.3:65415061-65415080 MS.gene70678:intron 45.0%
ACAAAACTCCCACCATGACT+AGG - chr3.3:65415411-65415430 MS.gene70678:intron 45.0%
ACCGATAGCAGCAGTAATGT+TGG + chr3.3:65416579-65416598 None:intergenic 45.0%
ACTAAGTTTGGTCGGGTACA+TGG - chr3.3:65415160-65415179 MS.gene70678:CDS 45.0%
AGATTATTACCCCTCAACGG+CGG + chr3.3:65411809-65411828 None:intergenic 45.0%
AGCAGCAGTAATGTTGGATG+TGG + chr3.3:65416573-65416592 None:intergenic 45.0%
AGCTAGGAAAACCCACTGTT+TGG - chr3.3:65414476-65414495 MS.gene70678:intron 45.0%
AGTGCAGCATGTGCCAAAAA+TGG + chr3.3:65417578-65417597 None:intergenic 45.0%
AGTTTCACGTTATGTGGGCT+GGG - chr3.3:65414376-65414395 MS.gene70678:intron 45.0%
ATACAAGAATCCCTGGTGGT+TGG + chr3.3:65415455-65415474 None:intergenic 45.0%
ATAGGTCAGTTATTCCGGGA+CGG + chr3.3:65413105-65413124 None:intergenic 45.0%
ATCGTGAATTGAAGCTGTGC+TGG + chr3.3:65411779-65411798 None:intergenic 45.0%
ATGTACCCGACCAAACTTAG+TGG + chr3.3:65415161-65415180 None:intergenic 45.0%
CCTATCCCACTAAGTTTGGT+CGG - chr3.3:65415152-65415171 MS.gene70678:intron 45.0%
CCTGTTTATCCCAGTGGTAT+GGG - chr3.3:65414531-65414550 MS.gene70678:intron 45.0%
CGACCAAACTTAGTGGGATA+GGG + chr3.3:65415154-65415173 None:intergenic 45.0%
CGGTTCCATGAAACAAGGAA+TGG + chr3.3:65413754-65413773 None:intergenic 45.0%
CGGTTGACCTAAAGATTGTG+AGG + chr3.3:65417487-65417506 None:intergenic 45.0%
CGTTATACAAGAATCCCTGG+TGG + chr3.3:65415459-65415478 None:intergenic 45.0%
CTATCCCACTAAGTTTGGTC+GGG - chr3.3:65415153-65415172 MS.gene70678:intron 45.0%
CTGGCTGTGTAACCAAACAA+TGG - chr3.3:65412416-65412435 MS.gene70678:intron 45.0%
CTGTGTTTGATCTGTCCACA+GGG - chr3.3:65417524-65417543 MS.gene70678:intron 45.0%
CTTTGACAGCTTAGCGAAGA+AGG - chr3.3:65413457-65413476 MS.gene70678:intron 45.0%
GAGGATAAAATTCTCGTCCC+TGG - chr3.3:65411646-65411665 MS.gene70678:CDS 45.0%
GATAGGTCTCAATCTTCTCC+CGG - chr3.3:65417198-65417217 MS.gene70678:CDS 45.0%
GCATACCAACTTCCCACTTT+CGG + chr3.3:65414238-65414257 None:intergenic 45.0%
GCCTGTAGTACATGTCTTTC+AGG - chr3.3:65412666-65412685 MS.gene70678:CDS 45.0%
GCTTAAGCAGAAGATGATGC+TGG - chr3.3:65415057-65415076 MS.gene70678:intron 45.0%
GGAATTGACCTAGTCATGGT+GGG + chr3.3:65415422-65415441 None:intergenic 45.0%
GGGAGAGAGTTTATTCATGC+AGG + chr3.3:65416354-65416373 None:intergenic 45.0%
GGTTGGAATTGACCTAGTCA+TGG + chr3.3:65415426-65415445 None:intergenic 45.0%
GTAGGTCAATTAAACCGGGA+CGG - chr3.3:65413297-65413316 MS.gene70678:intron 45.0%
GTGCATTCACTTCAACAAGC+TGG + chr3.3:65414191-65414210 None:intergenic 45.0%
TAGTATGGTAGTAGAGGCAG+AGG + chr3.3:65415288-65415307 None:intergenic 45.0%
TCAGAGCTGATATCCTCACA+CGG + chr3.3:65413484-65413503 None:intergenic 45.0%
TCCTGTTTATCCCAGTGGTA+TGG - chr3.3:65414530-65414549 MS.gene70678:intron 45.0%
TGAATTGAAGCTGTGCTGGA+AGG + chr3.3:65411775-65411794 None:intergenic 45.0%
TGCAAGAAAGGGTTCGTCAA+GGG + chr3.3:65412056-65412075 None:intergenic 45.0%
TGCAGGAACTTATGCGTACA+GGG - chr3.3:65417152-65417171 MS.gene70678:CDS 45.0%
TGCCATCTTTATCCTGGACT+TGG - chr3.3:65414735-65414754 MS.gene70678:intron 45.0%
TGGAATTGACCTAGTCATGG+TGG + chr3.3:65415423-65415442 None:intergenic 45.0%
TGTACCCGACCAAACTTAGT+GGG + chr3.3:65415160-65415179 None:intergenic 45.0%
! ACGAGAATTTTATCCTCCGG+TGG + chr3.3:65411643-65411662 None:intergenic 45.0%
! ATTTTATCCTCCGGTGGAAG+AGG + chr3.3:65411637-65411656 None:intergenic 45.0%
! GCTAGAAAAGCTGCTTTGTC+TGG - chr3.3:65416280-65416299 MS.gene70678:intron 45.0%
! GCTTCAATTGGTTCATCTGC+TGG - chr3.3:65412845-65412864 MS.gene70678:intron 45.0%
! GGGACGAGAATTTTATCCTC+CGG + chr3.3:65411646-65411665 None:intergenic 45.0%
! GTTTTGTGTGAGGGGGTAAT+TGG - chr3.3:65411897-65411916 MS.gene70678:intron 45.0%
! TGTGAGGATATCAGCTCTGA+TGG - chr3.3:65413484-65413503 MS.gene70678:intron 45.0%
!! TAGAGAGAGTGGAAGTACCA+GGG + chr3.3:65411666-65411685 None:intergenic 45.0%
!! TTAGAGAGAGTGGAAGTACC+AGG + chr3.3:65411667-65411686 None:intergenic 45.0%
!! TTTCACGACAAAAGGGCATC+TGG + chr3.3:65412318-65412337 None:intergenic 45.0%
!!! GTGTTTTGATTTCCTGTGGG+AGG - chr3.3:65414782-65414801 MS.gene70678:intron 45.0%
!!! TGTAGTCTGCCATTTTTCCC+TGG - chr3.3:65415758-65415777 MS.gene70678:intron 45.0%
AAAGACGTCTTTCCAGTCCC+AGG + chr3.3:65414014-65414033 None:intergenic 50.0%
AAAGGGTTCGTCAAGGGGAA+CGG + chr3.3:65412050-65412069 None:intergenic 50.0%
AACCCTACGACCGACCAAAA+CGG - chr3.3:65411565-65411584 MS.gene70678:CDS 50.0%
AAGACGTCTTTCCAGTCCCA+GGG + chr3.3:65414013-65414032 None:intergenic 50.0%
AGGCTTTCGACTTCATCTGC+AGG + chr3.3:65416253-65416272 None:intergenic 50.0%
AGGTGAACGTTGGGAAGCTA+CGG + chr3.3:65411593-65411612 None:intergenic 50.0%
ATCTGTCCACAGGGAATGAG+TGG - chr3.3:65417533-65417552 MS.gene70678:intron 50.0%
ATGGTGGTAGAGGTGAACGT+TGG + chr3.3:65411603-65411622 None:intergenic 50.0%
CAACCATTGAACCAACCACC+AGG - chr3.3:65415441-65415460 MS.gene70678:intron 50.0%
CAAGAGGATGCCACATGTCA+GGG - chr3.3:65415586-65415605 MS.gene70678:intron 50.0%
CAGTTTCACGTTATGTGGGC+TGG - chr3.3:65414375-65414394 MS.gene70678:intron 50.0%
CCCATACCACTGGGATAAAC+AGG + chr3.3:65414534-65414553 None:intergenic 50.0%
CCGACCAAACTTAGTGGGAT+AGG + chr3.3:65415155-65415174 None:intergenic 50.0%
CGGACAATACTACCAAGTCC+AGG + chr3.3:65414750-65414769 None:intergenic 50.0%
CTGCAAGAAAGGGTTCGTCA+AGG + chr3.3:65412057-65412076 None:intergenic 50.0%
GCAAGAAAGGGTTCGTCAAG+GGG + chr3.3:65412055-65412074 None:intergenic 50.0%
GCTGTGTTTGATCTGTCCAC+AGG - chr3.3:65417523-65417542 MS.gene70678:intron 50.0%
GGAGTGGCAAGATATGGAAG+TGG - chr3.3:65412180-65412199 MS.gene70678:intron 50.0%
GGAGTGGTGTTCCTAACTAG+TGG + chr3.3:65416936-65416955 None:intergenic 50.0%
GGTAGAGGAAGAAGGCAATC+TGG - chr3.3:65416133-65416152 MS.gene70678:intron 50.0%
GTCAATTAAACCGGGACGGA+GGG - chr3.3:65413301-65413320 MS.gene70678:intron 50.0%
GTGCAGGAACTTATGCGTAC+AGG - chr3.3:65417151-65417170 MS.gene70678:CDS 50.0%
GTTCTCCGAAAGTGGGAAGT+TGG - chr3.3:65414230-65414249 MS.gene70678:intron 50.0%
TCAAGAGGATGCCACATGTC+AGG - chr3.3:65415585-65415604 MS.gene70678:intron 50.0%
TCATACCGGGCTTGAAGAGT+TGG + chr3.3:65417115-65417134 None:intergenic 50.0%
TGGTGGTAGAGGTGAACGTT+GGG + chr3.3:65411602-65411621 None:intergenic 50.0%
TTAACATACTCCCTCCGTCC+CGG + chr3.3:65413314-65413333 None:intergenic 50.0%
TTACAATACTCCCTCCGTCC+CGG - chr3.3:65413088-65413107 MS.gene70678:CDS 50.0%
TTTCCCACTCAGATTCCCAC+AGG - chr3.3:65414164-65414183 MS.gene70678:intron 50.0%
TTTCCTGAATACCCTCCCAC+AGG + chr3.3:65414797-65414816 None:intergenic 50.0%
! ATCCCTGGTGGTTGGTTCAA+TGG + chr3.3:65415447-65415466 None:intergenic 50.0%
! ATTCTTTTGCATGGACCCCC+TGG - chr3.3:65413993-65414012 MS.gene70678:intron 50.0%
! CTATCGGGTTCTGTGTTGCT+TGG - chr3.3:65411949-65411968 MS.gene70678:intron 50.0%
! CTGACCCACAGCTTCTAGAA+TGG - chr3.3:65412977-65412996 MS.gene70678:intron 50.0%
! CTGGTGGTTGGTTCAATGGT+TGG + chr3.3:65415443-65415462 None:intergenic 50.0%
! GTTTCACGTTATGTGGGCTG+GGG - chr3.3:65414377-65414396 MS.gene70678:intron 50.0%
! TGAAACTGCAGAGGCATGTG+AGG - chr3.3:65417428-65417447 MS.gene70678:CDS 50.0%
! TTCTTTTGCATGGACCCCCT+GGG - chr3.3:65413994-65414013 MS.gene70678:intron 50.0%
!! CAGCTTTTCTAGCAGCAGCA+AGG + chr3.3:65416273-65416292 None:intergenic 50.0%
!! CTCACCGGTTCCATGAAACA+AGG + chr3.3:65413759-65413778 None:intergenic 50.0%
!! TTTCACGTTATGTGGGCTGG+GGG - chr3.3:65414378-65414397 MS.gene70678:intron 50.0%
!! TTTCCTGTGGGAGGGTATTC+AGG - chr3.3:65414791-65414810 MS.gene70678:intron 50.0%
AAGGGTTCGTCAAGGGGAAC+GGG + chr3.3:65412049-65412068 None:intergenic 55.0%
ACTTCAACAAGCTGGGCCTG+TGG + chr3.3:65414183-65414202 None:intergenic 55.0%
AGACGTCTTTCCAGTCCCAG+GGG + chr3.3:65414012-65414031 None:intergenic 55.0%
ATCAACCGTGCCCTGACATG+TGG + chr3.3:65415599-65415618 None:intergenic 55.0%
ATTACCCCTCAACGGCGGAA+CGG + chr3.3:65411804-65411823 None:intergenic 55.0%
CTTCAACAAGCTGGGCCTGT+GGG + chr3.3:65414182-65414201 None:intergenic 55.0%
GACCTTCCACTCATTCCCTG+TGG + chr3.3:65417542-65417561 None:intergenic 55.0%
GGTCAATTAAACCGGGACGG+AGG - chr3.3:65413300-65413319 MS.gene70678:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr3.3:65413101-65413120 None:intergenic 55.0%
GTCCACAGGGAATGAGTGGA+AGG - chr3.3:65417537-65417556 MS.gene70678:intron 55.0%
TACCGGGCTTGAAGAGTTGG+TGG + chr3.3:65417112-65417131 None:intergenic 55.0%
TAGCGAAGAAGGACCGTGTG+AGG - chr3.3:65413468-65413487 MS.gene70678:intron 55.0%
TCGTCAAGGGGAACGGGAAT+CGG + chr3.3:65412043-65412062 None:intergenic 55.0%
TTATCCTCCGGTGGAAGAGG+AGG + chr3.3:65411634-65411653 None:intergenic 55.0%
! ACCGGGCTTGAAGAGTTGGT+GGG + chr3.3:65417111-65417130 None:intergenic 55.0%
! ACTGCAGAGGCATGTGAGGT+AGG - chr3.3:65417432-65417451 MS.gene70678:CDS 55.0%
!! CAAAAGGGCATCTGGACGTG+CGG + chr3.3:65412310-65412329 None:intergenic 55.0%
!! GGTGGGAGTTTTGTAGCACC+TGG + chr3.3:65415405-65415424 None:intergenic 55.0%
ATGTCCGTTCCGCCGTTGAG+GGG - chr3.3:65411797-65411816 MS.gene70678:CDS 60.0%
GACGTCTTTCCAGTCCCAGG+GGG + chr3.3:65414011-65414030 None:intergenic 60.0%
GATGTCCGTTCCGCCGTTGA+GGG - chr3.3:65411796-65411815 MS.gene70678:CDS 60.0%
GCCCACCAACTCTTCAAGCC+CGG - chr3.3:65417107-65417126 MS.gene70678:intron 60.0%
GGATGCCACATGTCAGGGCA+CGG - chr3.3:65415591-65415610 MS.gene70678:intron 60.0%
GGGCCTGTGGGAATCTGAGT+GGG + chr3.3:65414170-65414189 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG + chr3.3:65413102-65413121 None:intergenic 60.0%
TGGGCCTGTGGGAATCTGAG+TGG + chr3.3:65414171-65414190 None:intergenic 60.0%
! TTCATGCAGGGGGCGCAGAA+AGG + chr3.3:65416341-65416360 None:intergenic 60.0%
!! AGCTACGGCGCCGTTTTGGT+CGG + chr3.3:65411578-65411597 None:intergenic 60.0%
!! CGCCGTTTTGGTCGGTCGTA+GGG + chr3.3:65411570-65411589 None:intergenic 60.0%
AGAGGAGGAGGGGGAGATGG+TGG + chr3.3:65411619-65411638 None:intergenic 65.0%
CCTCCGGTGGAAGAGGAGGA+GGG + chr3.3:65411630-65411649 None:intergenic 65.0%
CGATGTCCGTTCCGCCGTTG+AGG - chr3.3:65411795-65411814 MS.gene70678:CDS 65.0%
CTCCGGTGGAAGAGGAGGAG+GGG + chr3.3:65411629-65411648 None:intergenic 65.0%
GGAAGAGGAGGAGGGGGAGA+TGG + chr3.3:65411622-65411641 None:intergenic 65.0%
TCCCCCTCCTCCTCTTCCAC+CGG - chr3.3:65411624-65411643 MS.gene70678:CDS 65.0%
TCCGGTGGAAGAGGAGGAGG+GGG + chr3.3:65411628-65411647 None:intergenic 65.0%
TCCTCCGGTGGAAGAGGAGG+AGG + chr3.3:65411631-65411650 None:intergenic 65.0%
TTGCATGGACCCCCTGGGAC+TGG - chr3.3:65413999-65414018 MS.gene70678:intron 65.0%
! ATGCAGGGGGCGCAGAAAGG+AGG + chr3.3:65416338-65416357 None:intergenic 65.0%
! GGAGGGGGAGATGGTGGTAG+AGG + chr3.3:65411613-65411632 None:intergenic 65.0%
! GGGAAGCTACGGCGCCGTTT+TGG + chr3.3:65411582-65411601 None:intergenic 65.0%
!! GCGCCGTTTTGGTCGGTCGT+AGG + chr3.3:65411571-65411590 None:intergenic 65.0%
CCCTCCTCCTCTTCCACCGG+AGG - chr3.3:65411627-65411646 MS.gene70678:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 65411550 65417685 65411550 ID=MS.gene70678
chr3.3 mRNA 65411550 65417685 65411550 ID=MS.gene70678.t1;Parent=MS.gene70678
chr3.3 exon 65417568 65417685 65417568 ID=MS.gene70678.t1.exon1;Parent=MS.gene70678.t1
chr3.3 CDS 65417568 65417685 65417568 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65417417 65417480 65417417 ID=MS.gene70678.t1.exon2;Parent=MS.gene70678.t1
chr3.3 CDS 65417417 65417480 65417417 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65417126 65417232 65417126 ID=MS.gene70678.t1.exon3;Parent=MS.gene70678.t1
chr3.3 CDS 65417126 65417232 65417126 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65416548 65416615 65416548 ID=MS.gene70678.t1.exon4;Parent=MS.gene70678.t1
chr3.3 CDS 65416548 65416615 65416548 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65415666 65415769 65415666 ID=MS.gene70678.t1.exon5;Parent=MS.gene70678.t1
chr3.3 CDS 65415666 65415769 65415666 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65415462 65415566 65415462 ID=MS.gene70678.t1.exon6;Parent=MS.gene70678.t1
chr3.3 CDS 65415462 65415566 65415462 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65415157 65415246 65415157 ID=MS.gene70678.t1.exon7;Parent=MS.gene70678.t1
chr3.3 CDS 65415157 65415246 65415157 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65414984 65415059 65414984 ID=MS.gene70678.t1.exon8;Parent=MS.gene70678.t1
chr3.3 CDS 65414984 65415059 65414984 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65413065 65413134 65413065 ID=MS.gene70678.t1.exon9;Parent=MS.gene70678.t1
chr3.3 CDS 65413065 65413134 65413065 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65412908 65412978 65412908 ID=MS.gene70678.t1.exon10;Parent=MS.gene70678.t1
chr3.3 CDS 65412908 65412978 65412908 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65412639 65412729 65412639 ID=MS.gene70678.t1.exon11;Parent=MS.gene70678.t1
chr3.3 CDS 65412639 65412729 65412639 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65412043 65412170 65412043 ID=MS.gene70678.t1.exon12;Parent=MS.gene70678.t1
chr3.3 CDS 65412043 65412170 65412043 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65411786 65411914 65411786 ID=MS.gene70678.t1.exon13;Parent=MS.gene70678.t1
chr3.3 CDS 65411786 65411914 65411786 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
chr3.3 exon 65411550 65411690 65411550 ID=MS.gene70678.t1.exon14;Parent=MS.gene70678.t1
chr3.3 CDS 65411550 65411690 65411550 ID=cds.MS.gene70678.t1;Parent=MS.gene70678.t1
Gene Sequence

>MS.gene70678

ATGGAGACGGAGCAAAACCCTACGACCGACCAAAACGGCGCCGTAGCTTCCCAACGTTCACCTCTACCACCATCTCCCCCTCCTCCTCTTCCACCGGAGGATAAAATTCTCGTCCCTGGTACTTCCACTCTCTCTAATCTTATCTTCCTCTATTCTATAGATTCCAATTTCTCAACTAATTTTCGTTTCATTTTGCTTATTATAGTCGAGGTTTGCTTAAAACCTTCCAGCACAGCTTCAATTCACGATGTCCGTTCCGCCGTTGAGGGGTAATAATCTATCTCGCTTCTATTTTATTTTGTTATAGTTTCTAGGGTTTATAGAAATTGATTTTCTTTGTGGTTTTAGTTTTGTGTGAGGGGGTAATTGGAGACTTAAATTGAACTAATTTTAATTATTCTATCGGGTTCTGTGTTGCTTGGTGAATTTATGATAATTCAACTGGTTTTTTAGGATGCTTGAAAAGAGGAGTTTGAGCTATAATGGTGGACCGATTCCCGTTCCCCTTGACGAACCCTTTCTTGCAGATAATGTGCAAAGAATTTGCGTTTGTGATACAGGTCTGTATCTTTTTGTTTATTTTCAATTGTTTGTATGGTGGTTAACTGTTGATTTTATTGCTATCATTATGGAGTGGCAAGATATGGAAGTGGAACTCAATGATTTGATTTTTAAAGTATCATTTTTATTTTTGCCAATCTAAAGTTCCATTAAGACTGTCTTATGATGTGTTTGATTTTACGTTTACTCACGGCTGCCGCACGTCCAGATGCCCTTTTGTCGTGAAATTGAGAAGCTAGTAATTAGTAATTAAAGCTTCACTTTAAACGATTTTTTTTGGAGTAATTTTGACTAAATGTGGGAATCTGGCTGTGTAACCAAACAATGGCTGAGTTATACGAGTTGAATTGAGTGATTTAGCAATTAGTATGTCAATATGGAAGATAGGTAGTGTTCAAAATACAAGAATAACATAAATGCATTCCCTAGACAATATAGACTGATCAATTGCTGCTTCTCGGATTCTGATGCTAGTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTATAGGTGAAGGGATGCAGAATGATAACGTTCTTTTGTTCTGGCAAGTCAAGCCTGTAGTACATGTCTTTCAGGTGATACTGATTAGTGTTGATTTTATTTCATCGACAATATATTATGTTGCAGTCTTAGTTCTCCTAAGTTGCCATATCTTTGCTTGACTAATATATTCAATGAGCATATATGGTCCTATGGTTTTTCCTTTGTGTTTTTAAATCCAAAAGGTGATAAGCTTCAATTGGTTCATCTGCTGGCTAAACAGCACAGCTCCATACAGTCTCATGAGAGATAAAACCCATAATAAACTTCCCCCATTACAACGACACATAAGCAGAATCTGTAATCAGCTCATGGTAGAAGGTGCTGACCCACAGCTTCTAGAATGGTTTCTAACCGAAAAGAGAAAGTAACAAAAGTTGATATAATAGAAACATGCATATAGTAAACAAAGGAAAAAAAGAAGATAAAATGATATTACAATACTCCCTCCGTCCCGGAATAACTGACCTATTTTCTAAAAAAAAGTGTCCCAAAATAACTGACTCATTTCAATTTTCAATACAACTTTCATCATTTCCAATACAATATAACACTAAATAATAATACTTTTATCATTCCCAATACAATATATTTCACTTTACCCTTTATTTATACACTTTTCTTAATCTGTGTGAAAAACCAAAGTAGGTCAATTAAACCGGGACGGAGGGAGTATGTTAATGCTGTAACATGCAATGTTCCATTATGCATCAACATCATCCCTCTAATTGTACTTTGCTTAGTCTAGAATCTCTTTGTTCTGTTAATGTGGTTCAGAGCTTTCTGAATATTGTCTGTATTTTGCTTTGACAGCTTAGCGAAGAAGGACCGTGTGAGGATATCAGCTCTGATGGCCAGTCTTCTAGCTTCAATGAATGGATTCTTCCTGCAAAAGAATTTGATGGCATGTGGGAAAGGTTCTTACTTCTTTGTAGTTTGTGATTTTCCCTCAACTATAGTTTTCTTGATAAAATTTTAATTAATTTACCCTGCACCATTTACCATTGCTTTTGCAGCCTAATATATGAATCTGGTCTAAAGCAAAGGTTGCTACGGTATGCAGCAAGTGCTTTACTCTTCACTGAAAAGGCAGTTGATCCATTCCTTGTTTCATGGAACCGGTGAGTTCTAGAGATATGTATTTATTTTTGTATTGGCCTTATATGTTGTGATCACAACTTACTGATATGATTATATGTTCCTGAAAAATATCGTATCTCTACATATATTATGCATTTATATAAAATGATAGTTGAACATGAGTCAGTATGAGTGAGATGAGATGATTTACCTATGAACATATCTTGATATTTTTAGGATTTGTCATTATTTGCAGCATAATTCTTTTGCATGGACCCCCTGGGACTGGAAAGACGTCTTTATGTAAAGCATTAGCTCAGAAACTGTCAATCCGATTCAATTCGAGGTGCATTGATCTATTATTTATACTCTTAATCATATTTATCATTGAAAACAAGTAAATGAAGGGAGTACAAATTTACCTACCATTTTTTCCCACTCAGATTCCCACAGGCCCAGCTTGTTGAAGTGAATGCACATTCTTTGTTCAGTAAATGGTTCTCCGAAAGTGGGAAGTTGGTATGCATGTATGCCTTTACTTTAAGTTTCTGTCATTTTTGTATATTTCTTATTGACCTTTTGTAATTCACGCTTTTATTGCCTACTAGCTTCAATGTTTATTATATTGGTGAGCTTGGCAATCAGTTTCACGTTATGTGGGCTGGGGGCATAGAGTTTACGTACTTACCCGTGTCGCTTCAAATTGATATCAAGCTTGATCAAAGGATTGGATTGACTCAAATAGCTAGGAAAACCCACTGTTTGGTAGTTAGAATTTCATCCAGAAGATATGAAAATCCTGTTTATCCCAGTGGTATGGGCATAACTTTTGAGTTTGGGTAGTGATGCAGATCTTTAACTATTAGCTAGCATTGGTTAAGGTTGCTCATATGCCCATTCTACCTTTATATGATGGATAAAAATTACCAACTTTATGTTTGAAGACACATTCTTAGAGGATTATTATGCTGGGAGGTCGACTTAGTTTATAATATCCTTTTTTGCCATCTTTATCCTGGACTTGGTAGTATTGTCCGTGCATTGATAAAGTGTTTTGATTTCCTGTGGGAGGGTATTCAGGAAAAATAGGTTCATCGGTGTATAAAGACCCGCCATACAAAAGCATACACATTTGCAGACTAGCATTAACATTTGTATTAAAAAGCAAAAAAATGGTCAACACCATCTTCATTGTGATTGGTACTTTCGGAATTGAAGCATCAAGTTGCCATTTATTACATCTTATTATTAGTCTGGTTTTGCAAGGCATACTGTATCGGTTTTGACATTGGTCTGCAAAAAAGAAAGTTTGCAGTAGATGCTTGCTTAAGCAGAAGATGATGCTGGATGGTTTCTTATGGTGCCTGAAACTCTGAACCTATGTACTACCATAATCATATAGAACAACAACAACCAAACCCTATCCCACTAAGTTTGGTCGGGTACATGGATCAAATTACACCATAATGTTCTATCATAAACCATATTTCGGTCCAACTCAGTAATCTCTAAATCCTTCTTAATAGTTTCTCTTATAGTTTTTCTAGGTCTTCCTCTGCCTCTACTACCATACTAACAATAAATGGCAGTAAAACTTATTACACAATAGATTACCCATACAGGATGAAAAAGAAAATATATATATTTTTTTTATTTTTAAAAAGGGCAACCAGGTGCTACAAAACTCCCACCATGACTAGGTCAATTCCAACCATTGAACCAACCACCAGGGATTCTTGTATAACGAAATAAGTGGCTGTAGCATAGTATACTATACATCTATACATACTCGACATTGAATTTCTATATTTTATTTTATTTTTTATCTAAACTCCATGAAGCATATTAACTATCAAGAGGATGCCACATGTCAGGGCACGGTTGATTTGCAGTCAGCAGTTTGTAATCAATATTAGTTCATTGAGATGCTTAGCCTATGTTTAATCACATGTATTTAAGAAAAAAAAAAAAAAAAGTATACCAAATGGCCACATAATCCTACTATGGATACTGCAAACATTTTTATGTAGTCTGCCATTTTTCCCTGGATAATATTTTCTGTTCATTATATGTGTGTTTGTGTGTGTGTGAAAAATAATGTATGATTAACTAGTAAATTACATGTATCATTTAGGTGGGCATTTGGAATCATTAGTCATAAATTATGTTATTTCCCTTAACTATAGTCCAATAATCTCTTAATAGTATCATTTGACTATCTGTTTTGGAATTTAAGGAATTTTGAATCACAGAGATTAATAAGTCAATTGGTGAACGTACGAACTGTAACAAAGCAATATACTATACATGAACCAAAGTTGTAGTTTTGTTGTGTCAAATGCGTAACGGTGTCTCTTTATTTTTCTAGGTAGCAAAACTTTTCCAAAAGATTCAAGAAATGGTAGAGGAAGAAGGCAATCTGGTATTTGTTTTGATCGGTGAGGCATAATTGAAGAAAAATCAACTTACTGCATGTGTATATTTTTATAAGTCTACTTACTTATATATGTTTGCGATCCTGCAGATGAAGTCGAAAGCCTTGCTGCTGCTAGAAAAGCTGCTTTGTCTGGTTCCGAACCTTCTGATTCTATTCGGGTAAAATCCTCCTTTCTGCGCCCCCTGCATGAATAAACTCTCTCCCTCCCCACGATTTTTTGAAAATGCGATAGATTCTTGCACATCGTCACAAACATGTAAAAATTTAGTTCAGAAGTGATGACTTCTTTATGGGTGTCTGTAATAATATGGGTTCAATCTGAATATTCAATTTCAGGTTGTCAATGCATTATTAACTCAGATGGATAAGTTAAAATCATCTCCAAATGTGATAATTCTAACCACATCCAACATTACTGCTGCTATCGGTAAGCCTATATCACTTTCTCATCATTCAATTTTGCAGCTTATGTCCTTGTAAGTTATCTGCTGTTCTCTCCCATAAATATGATATTGATAGTTAGATCTGTCCTTGTCATTATACATCAGTCTAATTTTTATTTGAGAACTGAAGATCTAGCTTCCCTTAATGAGGATTTAGTGATTAAATGACCGTAAAAAAAAAGGGAATGCACTGAATGAAAGTCAAATTGCTAAATTATTAAGCACAGACTTCTGTTGCCAGCATCAGACAAACAATAACATGCCTGGATCTGGAATTAACCTTACTTTAACATAAAGCACATCACAAGAAAAACCTTTTTCCACTAGTTAGGAACACCACTCCAATGTCTTCCTAAAATAGTTTCTTCATGATCCACTTCCCCAATATATTTTCATTTGAAACGTATACTACAAATTTCACAGATCATACAATTTTATCAATTTCATTGCAGATATTGCTTTTGTTGATCGAGCTGATATCAAAGCATATGTTGGCCCACCAACTCTTCAAGCCCGGTATGAAATATTAAGGTCTTGTGTGCAGGAACTTATGCGTACAGGGATATTAACTAATTTTGAGGTACAGATAGGTCTCAATCTTCTCCCGGAATCTTTTTCGAAAATGAAAGGCATTAATAATCTAATCTTTATTTTGATTCAGATATTTTAGTTTGTTAATCTAATGGATAATCATGCTGACTTGGTTAGGATTGTAAGAATATCGTGCTTCCAAATTATGCTAGTGCAAAACAGAGAACGAACGCACCAGATTTTCATGAAGCTACTACATTCATGCAACTGTGCAAGAAATTAGTTGAAACTGCAGAGGCATGTGAGGTAGGAAAAAAAGATAACACTTGTGGATCTTTAACCTCACAATCTTTAGGTCAACCGTTATTTCTCAATAACTGCTGTGTTTGATCTGTCCACAGGGAATGAGTGGAAGGTCTCTCAGAAAGCTTCCATTTTTGGCACATGCTGCACTTGCAAATCCTTTTGATTGCAATCCTATCAAGTTCTTATGTACAATGATAGATACAGCAAAGAGGGAGCGTTCTGAGCTTCCTGACTAA
Protein sequence

>MS.gene70678.t1

METEQNPTTDQNGAVASQRSPLPPSPPPPLPPEDKILVPVEVCLKPSSTASIHDVRSAVEGMLEKRSLSYNGGPIPVPLDEPFLADNVQRICVCDTGEGMQNDNVLLFWQVKPVVHVFQLSEEGPCEDISSDGQSSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKAVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRFPQAQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELMRTGILTNFEDCKNIVLPNYASAKQRTNAPDFHEATTFMQLCKKLVETAEACEGMSGRSLRKLPFLAHAALANPFDCNPIKFLCTMIDTAKRERSELPD