Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71658.t1 | XP_013470031.1 | 98.3 | 418 | 7 | 0 | 1 | 418 | 1 | 418 | 8.40E-239 | 835.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71658.t1 | Q9C6D2 | 76.7 | 417 | 95 | 1 | 3 | 417 | 2 | 418 | 5.6e-191 | 668.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71658.t1 | A0A072VPX2 | 98.3 | 418 | 7 | 0 | 1 | 418 | 1 | 418 | 6.0e-239 | 835.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058010 | MS.gene71658 | 0.819013 | 1.45E-52 | -1.69E-46 |
| MS.gene060167 | MS.gene71658 | 0.812739 | 3.64E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71658.t1 | MTR_1g107235 | 98.325 | 418 | 7 | 0 | 1 | 418 | 1 | 418 | 0.0 | 857 |
| MS.gene71658.t1 | MTR_1g107235 | 95.130 | 308 | 9 | 2 | 1 | 302 | 1 | 308 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71658.t1 | AT1G49820 | 76.739 | 417 | 95 | 1 | 3 | 417 | 2 | 418 | 0.0 | 685 |
Find 81 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAAAGTGCAGTGAATTTA+TGG | 0.184173 | 1.4:+82645056 | None:intergenic |
| ATTCCTAGGAAACTTGATTT+TGG | 0.205496 | 1.4:-82646179 | MS.gene71658:CDS |
| AAAGAGACACCTTATCATTT+TGG | 0.222077 | 1.4:+82644907 | None:intergenic |
| TTTGATTGGTATGCGTTATT+TGG | 0.235748 | 1.4:-82647671 | MS.gene71658:CDS |
| CTGTGTTATGCAGGCATATA+AGG | 0.253321 | 1.4:-82645122 | MS.gene71658:intron |
| TTATACTCAGAAACTTTATA+TGG | 0.271029 | 1.4:+82646519 | None:intergenic |
| CCATAAATTCACTGCACTTT+GGG | 0.304944 | 1.4:-82645056 | MS.gene71658:CDS |
| GGAGAAATTGTTGTCGAGTT+TGG | 0.308716 | 1.4:+82648006 | None:intergenic |
| AAACGATGAAGACGAAATTA+AGG | 0.335482 | 1.4:+82647951 | None:intergenic |
| TATGCTCTTTCTTTCGTCAT+TGG | 0.340213 | 1.4:+82647778 | None:intergenic |
| GTTCTACCACGGAGCATAAA+CGG | 0.342649 | 1.4:-82647531 | MS.gene71658:CDS |
| GGTCCATAAAATGCAAATTC+AGG | 0.347893 | 1.4:+82646223 | None:intergenic |
| CTCAGAAAAGGGTTGATTGC+TGG | 0.353861 | 1.4:-82647631 | MS.gene71658:CDS |
| TTTCACGACAGTCTCGGATT+TGG | 0.354955 | 1.4:-82644935 | MS.gene71658:CDS |
| CCGTGATGCTGAGGCTGTTC+GGG | 0.363989 | 1.4:-82646472 | MS.gene71658:CDS |
| CTATAGCCGACGCTGGTAAA+CGG | 0.376012 | 1.4:-82644169 | MS.gene71658:CDS |
| GATCGTACTATGTCTTTGAT+TGG | 0.376412 | 1.4:-82647685 | MS.gene71658:CDS |
| TCAGGATTGTTATAGATTCC+TGG | 0.385724 | 1.4:+82644998 | None:intergenic |
| ACCGTGATGCTGAGGCTGTT+CGG | 0.390427 | 1.4:-82646473 | MS.gene71658:CDS |
| TATAGCCGACGCTGGTAAAC+GGG | 0.401581 | 1.4:-82644168 | MS.gene71658:CDS |
| GCTGGTGAGGCATATCTTCC+AGG | 0.401989 | 1.4:-82645016 | MS.gene71658:CDS |
| ACCATAAATTCACTGCACTT+TGG | 0.416058 | 1.4:-82645057 | MS.gene71658:CDS |
| TGGTGTTGAGTATCCTTTGT+TGG | 0.418687 | 1.4:-82647611 | MS.gene71658:CDS |
| CTGATACACAGGAGAATTGT+TGG | 0.419083 | 1.4:-82644218 | MS.gene71658:intron |
| TTCATTTAGGTTCTGTGAGA+GGG | 0.429000 | 1.4:-82646320 | MS.gene71658:intron |
| CCACATATAATTCTCAGAAA+AGG | 0.429159 | 1.4:-82647643 | MS.gene71658:CDS |
| CGATCAAAATGATAGACTTC+AGG | 0.437577 | 1.4:+82647703 | None:intergenic |
| TTCTACCACGGAGCATAAAC+GGG | 0.443750 | 1.4:-82647530 | MS.gene71658:CDS |
| TCTCCTATGCAACGAACATA+TGG | 0.446044 | 1.4:+82647808 | None:intergenic |
| GCCATCTCCGACTTCTTTGA+CGG | 0.448574 | 1.4:+82647976 | None:intergenic |
| TGTACAAGTAGTTGAACATC+AGG | 0.451446 | 1.4:+82644980 | None:intergenic |
| CACATATAATTCTCAGAAAA+GGG | 0.451881 | 1.4:-82647642 | MS.gene71658:CDS |
| AAGCCAAAATCAAGTTTCCT+AGG | 0.467754 | 1.4:+82646176 | None:intergenic |
| TTAAGACAATTGCAGACACT+TGG | 0.472640 | 1.4:-82645090 | MS.gene71658:CDS |
| GCGGGAATGTGGAGTTATGC+AGG | 0.477746 | 1.4:-82646569 | MS.gene71658:CDS |
| TTTGATATCGGAGCATTCCT+AGG | 0.479894 | 1.4:-82646193 | MS.gene71658:CDS |
| TTGCCATATGTTCGTTGCAT+AGG | 0.482313 | 1.4:-82647811 | MS.gene71658:CDS |
| TATACTCAGAAACTTTATAT+GGG | 0.482549 | 1.4:+82646520 | None:intergenic |
| ACGGGCAACCTGTGAACGGC+GGG | 0.494513 | 1.4:-82644150 | MS.gene71658:CDS |
| TAGGTTCTGTGAGAGGGCTC+AGG | 0.499778 | 1.4:-82646314 | MS.gene71658:CDS |
| ATCAAGTGCCCGCCGTTCAC+AGG | 0.500202 | 1.4:+82644142 | None:intergenic |
| GTTCATTTAGGTTCTGTGAG+AGG | 0.506829 | 1.4:-82646321 | MS.gene71658:intron |
| GACTTCTTTGACGGATAAGT+CGG | 0.509303 | 1.4:+82647985 | None:intergenic |
| TTTCTGAGAATTATATGTGG+TGG | 0.510662 | 1.4:+82647646 | None:intergenic |
| GTTATGCAGGCTCACTGAGC+AGG | 0.511628 | 1.4:-82646556 | MS.gene71658:CDS |
| TCGAGTTTGGATGAAAGTGC+AGG | 0.512775 | 1.4:+82648019 | None:intergenic |
| TTTGGATGAAAGTGCAGGGA+TGG | 0.516292 | 1.4:+82648024 | None:intergenic |
| TAGACTTCAGGAACATGATC+AGG | 0.522053 | 1.4:+82647715 | None:intergenic |
| TTGGCGCTGCCAAAATGATA+AGG | 0.541695 | 1.4:-82644916 | MS.gene71658:intron |
| GTTTATGCTCCGTGGTAGAA+CGG | 0.550540 | 1.4:+82647533 | None:intergenic |
| GATTTATTTCACGACAGTCT+CGG | 0.553286 | 1.4:-82644941 | MS.gene71658:CDS |
| TTATGCAGGCATATAAGGAA+TGG | 0.565476 | 1.4:-82645117 | MS.gene71658:intron |
| TGTTGGTGTGGCACATGTTG+AGG | 0.565977 | 1.4:-82644201 | MS.gene71658:CDS |
| TTCGTTGCATAGGAGAATCA+TGG | 0.568476 | 1.4:-82647801 | MS.gene71658:CDS |
| AAGTTTCTGAGTATAATCGC+TGG | 0.568636 | 1.4:-82646512 | MS.gene71658:CDS |
| GACAAAAGAACCGTTGGTGT+TGG | 0.569843 | 1.4:+82647928 | None:intergenic |
| GACTTATCCGTCAAAGAAGT+CGG | 0.577212 | 1.4:-82647983 | MS.gene71658:CDS |
| GTCATTGGCGTTGAAAGAAG+AGG | 0.581400 | 1.4:-82647749 | MS.gene71658:CDS |
| TCCGTCAAAGAAGTCGGAGA+TGG | 0.584966 | 1.4:-82647977 | MS.gene71658:CDS |
| TCAGCATCACGGTCAAGATG+AGG | 0.591643 | 1.4:+82646483 | None:intergenic |
| TCATCTTGACCGTGATGCTG+AGG | 0.596291 | 1.4:-82646481 | MS.gene71658:CDS |
| CAGCATCACGGTCAAGATGA+GGG | 0.597293 | 1.4:+82646484 | None:intergenic |
| GTAAACGGGCAACCTGTGAA+CGG | 0.615166 | 1.4:-82644154 | MS.gene71658:CDS |
| TTCATCGTTTCCAACACCAA+CGG | 0.620059 | 1.4:-82647938 | MS.gene71658:CDS |
| GGTTGCCCGTTTACCAGCGT+CGG | 0.622026 | 1.4:+82644163 | None:intergenic |
| AACGGGCAACCTGTGAACGG+CGG | 0.625939 | 1.4:-82644151 | MS.gene71658:CDS |
| CCCGAACAGCCTCAGCATCA+CGG | 0.629555 | 1.4:+82646472 | None:intergenic |
| GCTCCGATATCAAAACCCAT+TGG | 0.631526 | 1.4:+82646202 | None:intergenic |
| CGAGTTTGGATGAAAGTGCA+GGG | 0.636609 | 1.4:+82648020 | None:intergenic |
| TCATTGGCGTTGAAAGAAGA+GGG | 0.636857 | 1.4:-82647748 | MS.gene71658:CDS |
| TCTACACACTGGTTCTGTGA+TGG | 0.638431 | 1.4:-82646275 | MS.gene71658:CDS |
| TCTGCTTTACCGTTCTACCA+CGG | 0.645741 | 1.4:-82647542 | MS.gene71658:CDS |
| TTTGATGACAAAAGAACCGT+TGG | 0.648397 | 1.4:+82647922 | None:intergenic |
| AGGGCTCAGGCACTAATACA+CGG | 0.649727 | 1.4:-82646301 | MS.gene71658:CDS |
| GACATGTGATCAGCCAACAA+AGG | 0.649738 | 1.4:+82647598 | None:intergenic |
| AAAGTGCAGTGAATTTATGG+TGG | 0.659695 | 1.4:+82645059 | None:intergenic |
| CTTGAATCTATAGCCGACGC+TGG | 0.665528 | 1.4:-82644176 | MS.gene71658:CDS |
| ACCGTCCCGTTTATGCTCCG+TGG | 0.667752 | 1.4:+82647525 | None:intergenic |
| ACCACGGAGCATAAACGGGA+CGG | 0.670985 | 1.4:-82647526 | MS.gene71658:intron |
| ACACAGGAGAATTGTTGGTG+TGG | 0.730427 | 1.4:-82644213 | MS.gene71658:intron |
| ATACACGGAGATCTACACAC+TGG | 0.737182 | 1.4:-82646286 | MS.gene71658:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAATAAAAAACAG+TGG | - | chr1.4:82647739-82647758 | MS.gene71658:CDS | 10.0% |
| !!! | CTTTTTTCTATTTTTAATAA+TGG | - | chr1.4:82644292-82644311 | MS.gene71658:intron | 10.0% |
| !!! | TGTTTTTTTTATAAAAAACT+CGG | + | chr1.4:82645472-82645491 | None:intergenic | 10.0% |
| !! | AAGAATATTAATTGTCTATA+AGG | + | chr1.4:82645238-82645257 | None:intergenic | 15.0% |
| !! | ATGAAAATTTATGTTCATTT+AGG | - | chr1.4:82645816-82645835 | MS.gene71658:intron | 15.0% |
| !!! | CTCATTATTTTTATTAAAAG+AGG | + | chr1.4:82647285-82647304 | None:intergenic | 15.0% |
| !!! | CTCTTTTAATAAAAATAATG+AGG | - | chr1.4:82647283-82647302 | MS.gene71658:intron | 15.0% |
| !!! | GTTGTTTTAATATAAATTCA+CGG | - | chr1.4:82647587-82647606 | MS.gene71658:CDS | 15.0% |
| !!! | TTAATCTTTTCATTTGAAAA+TGG | - | chr1.4:82645184-82645203 | MS.gene71658:intron | 15.0% |
| !!! | TTGAAGTTTTTATTTTACTT+TGG | - | chr1.4:82646180-82646199 | MS.gene71658:CDS | 15.0% |
| !! | CAAACAAATAAATATGTTAC+GGG | + | chr1.4:82644678-82644697 | None:intergenic | 20.0% |
| !! | CTAATATTATCTGTAAAAGA+TGG | + | chr1.4:82646766-82646785 | None:intergenic | 20.0% |
| !! | GCAAACAAATAAATATGTTA+CGG | + | chr1.4:82644679-82644698 | None:intergenic | 20.0% |
| !! | TATACTCAGAAACTTTATAT+GGG | + | chr1.4:82645632-82645651 | None:intergenic | 20.0% |
| !! | TTATACTCAGAAACTTTATA+TGG | + | chr1.4:82645633-82645652 | None:intergenic | 20.0% |
| !!! | AAGTTTTTATTTTACTTTGG+CGG | - | chr1.4:82646183-82646202 | MS.gene71658:CDS | 20.0% |
| !!! | ATAATACTTTGATTTTAGCT+CGG | + | chr1.4:82645730-82645749 | None:intergenic | 20.0% |
| !!! | TATCTTTTGTTATAGAAAGA+GGG | + | chr1.4:82644921-82644940 | None:intergenic | 20.0% |
| !!! | TTATCTTTTGTTATAGAAAG+AGG | + | chr1.4:82644922-82644941 | None:intergenic | 20.0% |
| !!! | TTTTAAATTTGTCTCTGTAT+TGG | - | chr1.4:82644790-82644809 | MS.gene71658:intron | 20.0% |
| ! | AAAACTGTAAATAAGAACGA+AGG | + | chr1.4:82646315-82646334 | None:intergenic | 25.0% |
| ! | AAAGACTCAAATATTTACCA+AGG | + | chr1.4:82645163-82645182 | None:intergenic | 25.0% |
| ! | AAGACTCAAATATTTACCAA+GGG | + | chr1.4:82645162-82645181 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | + | chr1.4:82644878-82644897 | None:intergenic | 25.0% |
| ! | ACAATCATTAGAGAGATAAA+TGG | - | chr1.4:82647371-82647390 | MS.gene71658:intron | 25.0% |
| ! | AGTCACATCTTAGTTTATTT+GGG | - | chr1.4:82647423-82647442 | MS.gene71658:intron | 25.0% |
| ! | AGTTTCTATTGTCAAAAAGA+TGG | - | chr1.4:82647397-82647416 | MS.gene71658:intron | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | + | chr1.4:82644877-82644896 | None:intergenic | 25.0% |
| ! | ATAGTAATATATAACCCACA+TGG | - | chr1.4:82645264-82645283 | MS.gene71658:intron | 25.0% |
| ! | ATTTCAATTATCTGATACAC+AGG | - | chr1.4:82647920-82647939 | MS.gene71658:CDS | 25.0% |
| ! | CAAGAATAAATTAAGACCAA+TGG | + | chr1.4:82645538-82645557 | None:intergenic | 25.0% |
| ! | CACATATAATTCTCAGAAAA+GGG | - | chr1.4:82644507-82644526 | MS.gene71658:intron | 25.0% |
| ! | GAGAATAGAATGAAAAGAAT+GGG | + | chr1.4:82646073-82646092 | None:intergenic | 25.0% |
| ! | TAACCCATAAATCATAAACA+CGG | + | chr1.4:82647346-82647365 | None:intergenic | 25.0% |
| ! | TAGTAATATATAACCCACAT+GGG | - | chr1.4:82645265-82645284 | MS.gene71658:intron | 25.0% |
| ! | TGAGAATAGAATGAAAAGAA+TGG | + | chr1.4:82646074-82646093 | None:intergenic | 25.0% |
| ! | TGTGTATCAGATAATTGAAA+TGG | + | chr1.4:82647921-82647940 | None:intergenic | 25.0% |
| !! | AATTTCCTATTCTTTGTTTG+TGG | + | chr1.4:82646479-82646498 | None:intergenic | 25.0% |
| !! | ATCTTTTATGGACAAAGATT+AGG | + | chr1.4:82647876-82647895 | None:intergenic | 25.0% |
| !! | CTCTAAAAAATATCATATGC+TGG | + | chr1.4:82646866-82646885 | None:intergenic | 25.0% |
| !! | GTTACTAGACATATATTTTC+TGG | - | chr1.4:82646098-82646117 | MS.gene71658:intron | 25.0% |
| !! | TATGCATTAGATTTTTCACA+TGG | + | chr1.4:82646454-82646473 | None:intergenic | 25.0% |
| !! | TCTTTTCATTTGAAAATGGA+TGG | - | chr1.4:82645188-82645207 | MS.gene71658:intron | 25.0% |
| !!! | AATGCAGTAGTTTGTTTTTT+GGG | - | chr1.4:82645784-82645803 | MS.gene71658:intron | 25.0% |
| !!! | TAATGCAGTAGTTTGTTTTT+TGG | - | chr1.4:82645783-82645802 | MS.gene71658:intron | 25.0% |
| !!! | TTTTTAGAGAATCAACATTC+TGG | - | chr1.4:82646877-82646896 | MS.gene71658:intron | 25.0% |
| AAACGATGAAGACGAAATTA+AGG | + | chr1.4:82644201-82644220 | None:intergenic | 30.0% | |
| AAGACATGTTATGTTACCAT+TGG | - | chr1.4:82645519-82645538 | MS.gene71658:intron | 30.0% | |
| AATATGTTACGGGTATGAAA+AGG | + | chr1.4:82644668-82644687 | None:intergenic | 30.0% | |
| AATTATAGTGAGAGATTACG+AGG | - | chr1.4:82647472-82647491 | MS.gene71658:intron | 30.0% | |
| ACTACTAACAATTGAAGACT+TGG | - | chr1.4:82646801-82646820 | MS.gene71658:intron | 30.0% | |
| AGACTCAAATATTTACCAAG+GGG | + | chr1.4:82645161-82645180 | None:intergenic | 30.0% | |
| AGTTTATTTGGGCATTAGAA+GGG | - | chr1.4:82647434-82647453 | MS.gene71658:intron | 30.0% | |
| ATAAGCCACAAACAAAGAAT+AGG | - | chr1.4:82646471-82646490 | MS.gene71658:CDS | 30.0% | |
| ATGATACCCTAAAGATATGT+AGG | + | chr1.4:82646246-82646265 | None:intergenic | 30.0% | |
| ATGTCCGTGTTTATGATTTA+TGG | - | chr1.4:82647339-82647358 | MS.gene71658:intron | 30.0% | |
| CAATAAAGACATGGAAAAAG+AGG | + | chr1.4:82646049-82646068 | None:intergenic | 30.0% | |
| CCACATATAATTCTCAGAAA+AGG | - | chr1.4:82644506-82644525 | MS.gene71658:intron | 30.0% | |
| CCAGAACAAAAAATGTGTAA+TGG | + | chr1.4:82647768-82647787 | None:intergenic | 30.0% | |
| CTTCAATTGTTAGTAGTGTT+GGG | + | chr1.4:82646798-82646817 | None:intergenic | 30.0% | |
| GAGTCACATCTTAGTTTATT+TGG | - | chr1.4:82647422-82647441 | MS.gene71658:intron | 30.0% | |
| TAGATCTCTATCTCTAGTTA+TGG | - | chr1.4:82646149-82646168 | MS.gene71658:CDS | 30.0% | |
| TAGTTTATTTGGGCATTAGA+AGG | - | chr1.4:82647433-82647452 | MS.gene71658:intron | 30.0% | |
| TATAGAAACGCAAAGTTTAG+AGG | + | chr1.4:82646992-82647011 | None:intergenic | 30.0% | |
| TCCTAAAAACTAGTCAATGT+AGG | + | chr1.4:82646927-82646946 | None:intergenic | 30.0% | |
| TCTTCAATTGTTAGTAGTGT+TGG | + | chr1.4:82646799-82646818 | None:intergenic | 30.0% | |
| TCTTTGTCCATAAAAGATTG+AGG | - | chr1.4:82647878-82647897 | MS.gene71658:intron | 30.0% | |
| TGAATAGACTTGTGGAATTT+GGG | - | chr1.4:82646719-82646738 | MS.gene71658:intron | 30.0% | |
| TGGTAACATAACATGTCTTA+CGG | + | chr1.4:82645518-82645537 | None:intergenic | 30.0% | |
| TGTCCGTGTTTATGATTTAT+GGG | - | chr1.4:82647340-82647359 | MS.gene71658:intron | 30.0% | |
| TGTTTGATGTACAGAGTAAT+GGG | + | chr1.4:82646644-82646663 | None:intergenic | 30.0% | |
| TTCTCTGAATTAGGATAACA+AGG | + | chr1.4:82646391-82646410 | None:intergenic | 30.0% | |
| TTGTTATCCTAATTCAGAGA+AGG | - | chr1.4:82646390-82646409 | MS.gene71658:intron | 30.0% | |
| TTTATAAAAAACTCGGCATC+CGG | + | chr1.4:82645465-82645484 | None:intergenic | 30.0% | |
| TTTGATTGGTATGCGTTATT+TGG | - | chr1.4:82644478-82644497 | MS.gene71658:intron | 30.0% | |
| ! | AAAGAGACACCTTATCATTT+TGG | + | chr1.4:82647245-82647264 | None:intergenic | 30.0% |
| ! | ACTAGACATATATTTTCTGG+TGG | - | chr1.4:82646101-82646120 | MS.gene71658:intron | 30.0% |
| ! | ATACATTTTTCCACAAGGTA+GGG | + | chr1.4:82647563-82647582 | None:intergenic | 30.0% |
| ! | ATTCCTAGGAAACTTGATTT+TGG | - | chr1.4:82645970-82645989 | MS.gene71658:intron | 30.0% |
| ! | ATTTGCATTTTATGGACCAA+TGG | - | chr1.4:82645931-82645950 | MS.gene71658:intron | 30.0% |
| ! | CATGATATCGTCTTTGTTTA+TGG | + | chr1.4:82646577-82646596 | None:intergenic | 30.0% |
| ! | CTCTTTTTCCATGTCTTTAT+TGG | - | chr1.4:82646047-82646066 | MS.gene71658:intron | 30.0% |
| ! | GATCCTGAATTTGCATTTTA+TGG | - | chr1.4:82645923-82645942 | MS.gene71658:intron | 30.0% |
| ! | TGATCACATGTCTGATTTTA+TGG | - | chr1.4:82644562-82644581 | MS.gene71658:intron | 30.0% |
| ! | TTGAAGAAGAGATGAAGTTT+TGG | + | chr1.4:82644263-82644282 | None:intergenic | 30.0% |
| ! | TTTCTGAGAATTATATGTGG+TGG | + | chr1.4:82644506-82644525 | None:intergenic | 30.0% |
| ! | TTTGCATTTTATGGACCAAT+GGG | - | chr1.4:82645932-82645951 | MS.gene71658:intron | 30.0% |
| !! | AACCTATTTATTTTTCCTGG+AGG | + | chr1.4:82647807-82647826 | None:intergenic | 30.0% |
| !! | AAGAGCATATTTTGAGTCAT+TGG | - | chr1.4:82644385-82644404 | MS.gene71658:intron | 30.0% |
| !! | CCTTTTCTGAGAATTATATG+TGG | + | chr1.4:82644509-82644528 | None:intergenic | 30.0% |
| !! | TGATTTGCTTTGTTCTTGTT+AGG | - | chr1.4:82644851-82644870 | MS.gene71658:intron | 30.0% |
| !! | TGGAACCTATTTATTTTTCC+TGG | + | chr1.4:82647810-82647829 | None:intergenic | 30.0% |
| !!! | CCATTACACATTTTTTGTTC+TGG | - | chr1.4:82647765-82647784 | MS.gene71658:CDS | 30.0% |
| !!! | TCCTACATTGACTAGTTTTT+AGG | - | chr1.4:82646923-82646942 | MS.gene71658:intron | 30.0% |
| !!! | TTTCAGTTTTTTCCTTGTTG+AGG | - | chr1.4:82646957-82646976 | MS.gene71658:intron | 30.0% |
| AAAGTGCAGTGAATTTATGG+TGG | + | chr1.4:82647093-82647112 | None:intergenic | 35.0% | |
| AAGCAGTCCTACATATCTTT+AGG | - | chr1.4:82646236-82646255 | MS.gene71658:CDS | 35.0% | |
| AAGCCAAAATCAAGTTTCCT+AGG | + | chr1.4:82645976-82645995 | None:intergenic | 35.0% | |
| AAGTTTCTGAGTATAATCGC+TGG | - | chr1.4:82645637-82645656 | MS.gene71658:intron | 35.0% | |
| AATTGTAAGTACTTGCGAGA+CGG | + | chr1.4:82645110-82645129 | None:intergenic | 35.0% | |
| ACATGACAGAGTAATTCTCA+TGG | - | chr1.4:82646826-82646845 | MS.gene71658:intron | 35.0% | |
| ACCAAGTAATCAAGTCCAAA+GGG | - | chr1.4:82647635-82647654 | MS.gene71658:CDS | 35.0% | |
| ACCATAAATTCACTGCACTT+TGG | - | chr1.4:82647092-82647111 | MS.gene71658:intron | 35.0% | |
| AGAGAGAATCGTAGTATAAG+GGG | + | chr1.4:82646621-82646640 | None:intergenic | 35.0% | |
| AGCAGTCCTACATATCTTTA+GGG | - | chr1.4:82646237-82646256 | MS.gene71658:CDS | 35.0% | |
| AGCCTCCAGGAAAAATAAAT+AGG | - | chr1.4:82647802-82647821 | MS.gene71658:CDS | 35.0% | |
| AGGATAACAAAACCTCAACA+AGG | + | chr1.4:82646972-82646991 | None:intergenic | 35.0% | |
| ATTGTCTATAAGGCACAAGA+AGG | + | chr1.4:82645228-82645247 | None:intergenic | 35.0% | |
| CCATAAATTCACTGCACTTT+GGG | - | chr1.4:82647093-82647112 | MS.gene71658:intron | 35.0% | |
| CGATCAAAATGATAGACTTC+AGG | + | chr1.4:82644449-82644468 | None:intergenic | 35.0% | |
| CTACCTTGTGGAAAAATGTA+TGG | - | chr1.4:82647562-82647581 | MS.gene71658:CDS | 35.0% | |
| GAATAGACTTGTGGAATTTG+GGG | - | chr1.4:82646720-82646739 | MS.gene71658:intron | 35.0% | |
| GAGAGAGAATCGTAGTATAA+GGG | + | chr1.4:82646622-82646641 | None:intergenic | 35.0% | |
| GAGGTCAATGATCTATCTTT+AGG | - | chr1.4:82647491-82647510 | MS.gene71658:intron | 35.0% | |
| GATCGTACTATGTCTTTGAT+TGG | - | chr1.4:82644464-82644483 | MS.gene71658:intron | 35.0% | |
| GATTTATTTCACGACAGTCT+CGG | - | chr1.4:82647208-82647227 | MS.gene71658:intron | 35.0% | |
| GGATAACAAGGAACTAGTTA+TGG | + | chr1.4:82646379-82646398 | None:intergenic | 35.0% | |
| GGTCCATAAAATGCAAATTC+AGG | + | chr1.4:82645929-82645948 | None:intergenic | 35.0% | |
| GTACTTACAATTATGCCAGT+AGG | - | chr1.4:82645118-82645137 | MS.gene71658:intron | 35.0% | |
| GTGAATAGACTTGTGGAATT+TGG | - | chr1.4:82646718-82646737 | MS.gene71658:intron | 35.0% | |
| GTGTTTGATGTACAGAGTAA+TGG | + | chr1.4:82646645-82646664 | None:intergenic | 35.0% | |
| GTTTATTTGGGCATTAGAAG+GGG | - | chr1.4:82647435-82647454 | MS.gene71658:intron | 35.0% | |
| TAGAGCGGAAAAAAGTAGTT+AGG | + | chr1.4:82646679-82646698 | None:intergenic | 35.0% | |
| TATGCTCTTTCTTTCGTCAT+TGG | + | chr1.4:82644374-82644393 | None:intergenic | 35.0% | |
| TATGGACAAAGATTAGGTCA+GGG | + | chr1.4:82647870-82647889 | None:intergenic | 35.0% | |
| TCAATGATCTATCTTTAGGC+TGG | - | chr1.4:82647495-82647514 | MS.gene71658:intron | 35.0% | |
| TCAGGATTGTTATAGATTCC+TGG | + | chr1.4:82647154-82647173 | None:intergenic | 35.0% | |
| TGTACAAGTAGTTGAACATC+AGG | + | chr1.4:82647172-82647191 | None:intergenic | 35.0% | |
| TGTCTCTGTATTGGAAACAT+TGG | - | chr1.4:82644799-82644818 | MS.gene71658:intron | 35.0% | |
| TTAAGACAATTGCAGACACT+TGG | - | chr1.4:82647059-82647078 | MS.gene71658:intron | 35.0% | |
| TTATAAAAAACTCGGCATCC+GGG | + | chr1.4:82645464-82645483 | None:intergenic | 35.0% | |
| TTATGCAGGCATATAAGGAA+TGG | - | chr1.4:82647032-82647051 | MS.gene71658:intron | 35.0% | |
| TTATGGACAAAGATTAGGTC+AGG | + | chr1.4:82647871-82647890 | None:intergenic | 35.0% | |
| TTCAGCTCAACTGAATTTCA+GGG | + | chr1.4:82644763-82644782 | None:intergenic | 35.0% | |
| TTGTTTATGGCATATGCCTT+GGG | + | chr1.4:82646564-82646583 | None:intergenic | 35.0% | |
| TTTAACACACTGTGTTATGC+AGG | - | chr1.4:82647018-82647037 | MS.gene71658:intron | 35.0% | |
| TTTCAGCTCAACTGAATTTC+AGG | + | chr1.4:82644764-82644783 | None:intergenic | 35.0% | |
| TTTGTTTATGGCATATGCCT+TGG | + | chr1.4:82646565-82646584 | None:intergenic | 35.0% | |
| ! | CAACCATACATTTTTCCACA+AGG | + | chr1.4:82647568-82647587 | None:intergenic | 35.0% |
| ! | CATACATTTTTCCACAAGGT+AGG | + | chr1.4:82647564-82647583 | None:intergenic | 35.0% |
| ! | CATGACACCTCAATCTTTTA+TGG | + | chr1.4:82647888-82647907 | None:intergenic | 35.0% |
| ! | CTCATGGTGCAAATTTTTGT+GGG | - | chr1.4:82645352-82645371 | MS.gene71658:intron | 35.0% |
| ! | TTCATTTAGGTTCTGTGAGA+GGG | - | chr1.4:82645829-82645848 | MS.gene71658:intron | 35.0% |
| ! | TTTGATGACAAAAGAACCGT+TGG | + | chr1.4:82644230-82644249 | None:intergenic | 35.0% |
| !! | AGCTTGCTTTGGCTTTAAAT+GGG | - | chr1.4:82645388-82645407 | MS.gene71658:intron | 35.0% |
| !! | CTTTGGGATGAGCATAAAAA+TGG | - | chr1.4:82647109-82647128 | MS.gene71658:intron | 35.0% |
| !! | GTTTTATTGAGCTTACCTAC+TGG | + | chr1.4:82645136-82645155 | None:intergenic | 35.0% |
| !!! | GATTTTGGCTTTCTTTTCTC+AGG | - | chr1.4:82645985-82646004 | MS.gene71658:intron | 35.0% |
| AAGATAGCTTCTTCCATAGC+TGG | + | chr1.4:82646540-82646559 | None:intergenic | 40.0% | |
| AATCGTAGTATAAGGGGTCA+AGG | + | chr1.4:82646615-82646634 | None:intergenic | 40.0% | |
| ACGGGTATGAAAAGGTGAAA+AGG | + | chr1.4:82644660-82644679 | None:intergenic | 40.0% | |
| AGAATGGGCCAATAAAGACA+TGG | + | chr1.4:82646058-82646077 | None:intergenic | 40.0% | |
| AGATAGCTTCTTCCATAGCT+GGG | + | chr1.4:82646539-82646558 | None:intergenic | 40.0% | |
| AGCTCAATAAAACAACCCCT+TGG | - | chr1.4:82645143-82645162 | MS.gene71658:intron | 40.0% | |
| ATCGTAGTATAAGGGGTCAA+GGG | + | chr1.4:82646614-82646633 | None:intergenic | 40.0% | |
| CAAGCAAACGATAGAACAGT+AGG | - | chr1.4:82646022-82646041 | MS.gene71658:intron | 40.0% | |
| CAAGGTTCCTTCTCTGAATT+AGG | + | chr1.4:82646400-82646419 | None:intergenic | 40.0% | |
| CCACAAAAATTTGCACCATG+AGG | + | chr1.4:82645354-82645373 | None:intergenic | 40.0% | |
| CCCAAAGTGCAGTGAATTTA+TGG | + | chr1.4:82647096-82647115 | None:intergenic | 40.0% | |
| CGGGTATGAAAAGGTGAAAA+GGG | + | chr1.4:82644659-82644678 | None:intergenic | 40.0% | |
| CTAATTCAGAGAAGGAACCT+TGG | - | chr1.4:82646398-82646417 | MS.gene71658:intron | 40.0% | |
| CTGATACACAGGAGAATTGT+TGG | - | chr1.4:82647931-82647950 | MS.gene71658:CDS | 40.0% | |
| CTGTGTTATGCAGGCATATA+AGG | - | chr1.4:82647027-82647046 | MS.gene71658:intron | 40.0% | |
| GACCAAGTAATCAAGTCCAA+AGG | - | chr1.4:82647634-82647653 | MS.gene71658:CDS | 40.0% | |
| GACTTATCCGTCAAAGAAGT+CGG | - | chr1.4:82644166-82644185 | MS.gene71658:CDS | 40.0% | |
| GATGAGCATAAAAATGGTGC+TGG | - | chr1.4:82647115-82647134 | MS.gene71658:intron | 40.0% | |
| GATTTGTACATGGAAGAAGC+TGG | - | chr1.4:82646205-82646224 | MS.gene71658:CDS | 40.0% | |
| GGAGAAATTGTTGTCGAGTT+TGG | + | chr1.4:82644146-82644165 | None:intergenic | 40.0% | |
| GGAGAGAGAATCGTAGTATA+AGG | + | chr1.4:82646623-82646642 | None:intergenic | 40.0% | |
| GGGTTTCATTGCATTGTTGT+AGG | - | chr1.4:82644313-82644332 | MS.gene71658:intron | 40.0% | |
| GTTATATTCACTAAGCCTCC+AGG | - | chr1.4:82647789-82647808 | MS.gene71658:CDS | 40.0% | |
| TAGACTTCAGGAACATGATC+AGG | + | chr1.4:82644437-82644456 | None:intergenic | 40.0% | |
| TCTCCTATGCAACGAACATA+TGG | + | chr1.4:82644344-82644363 | None:intergenic | 40.0% | |
| TTCATCGTTTCCAACACCAA+CGG | - | chr1.4:82644211-82644230 | MS.gene71658:intron | 40.0% | |
| TTCCACAAGTCTATTCACAC+AGG | + | chr1.4:82646716-82646735 | None:intergenic | 40.0% | |
| TTCGTTGCATAGGAGAATCA+TGG | - | chr1.4:82644348-82644367 | MS.gene71658:intron | 40.0% | |
| TTGCCATATGTTCGTTGCAT+AGG | - | chr1.4:82644338-82644357 | MS.gene71658:intron | 40.0% | |
| ! | ATCAGTGTTTTCTCGTTCAG+AGG | + | chr1.4:82644091-82644110 | None:intergenic | 40.0% |
| ! | ATGCAGTTGCTGAATTTTGC+GGG | - | chr1.4:82645562-82645581 | MS.gene71658:intron | 40.0% |
| ! | CATGCAGTTGCTGAATTTTG+CGG | - | chr1.4:82645561-82645580 | MS.gene71658:intron | 40.0% |
| ! | CCTCATGGTGCAAATTTTTG+TGG | - | chr1.4:82645351-82645370 | MS.gene71658:intron | 40.0% |
| ! | CGGTTCTTTTGTCATCAAAC+AGG | - | chr1.4:82644231-82644250 | MS.gene71658:intron | 40.0% |
| ! | GACTTCTTTGACGGATAAGT+CGG | + | chr1.4:82644167-82644186 | None:intergenic | 40.0% |
| ! | GTTCATTTAGGTTCTGTGAG+AGG | - | chr1.4:82645828-82645847 | MS.gene71658:intron | 40.0% |
| ! | TCATTGGCGTTGAAAGAAGA+GGG | - | chr1.4:82644401-82644420 | MS.gene71658:intron | 40.0% |
| ! | TGGTGTTGAGTATCCTTTGT+TGG | - | chr1.4:82644538-82644557 | MS.gene71658:intron | 40.0% |
| ! | TTTGATATCGGAGCATTCCT+AGG | - | chr1.4:82645956-82645975 | MS.gene71658:intron | 40.0% |
| !! | GAGCTTGCTTTGGCTTTAAA+TGG | - | chr1.4:82645387-82645406 | MS.gene71658:intron | 40.0% |
| !! | GGACCAATGGGTTTTGATAT+CGG | - | chr1.4:82645944-82645963 | MS.gene71658:intron | 40.0% |
| !! | TACTTTGGCGGATTTGTACA+TGG | - | chr1.4:82646195-82646214 | MS.gene71658:CDS | 40.0% |
| !! | TTGGCTTTCTTTTCTCAGGA+TGG | - | chr1.4:82645989-82646008 | MS.gene71658:intron | 40.0% |
| !!! | ACTACTTTTTTCCGCTCTAC+TGG | - | chr1.4:82646680-82646699 | MS.gene71658:intron | 40.0% |
| AAGCCAAAGCAAGCTCTGTA+TGG | + | chr1.4:82645383-82645402 | None:intergenic | 45.0% | |
| ACAAAGATTAGGTCAGGGCA+CGG | + | chr1.4:82647865-82647884 | None:intergenic | 45.0% | |
| ACAAGGTAGGGTCGATTACA+TGG | + | chr1.4:82647551-82647570 | None:intergenic | 45.0% | |
| ACACAGGAGAATTGTTGGTG+TGG | - | chr1.4:82647936-82647955 | MS.gene71658:CDS | 45.0% | |
| ACTAGTTATGGTCACCATGC+AGG | + | chr1.4:82646367-82646386 | None:intergenic | 45.0% | |
| ATACACGGAGATCTACACAC+TGG | - | chr1.4:82645863-82645882 | MS.gene71658:intron | 45.0% | |
| ATGTAATCGACCCTACCTTG+TGG | - | chr1.4:82647550-82647569 | MS.gene71658:CDS | 45.0% | |
| GACAAAAGAACCGTTGGTGT+TGG | + | chr1.4:82644224-82644243 | None:intergenic | 45.0% | |
| GACATGTGATCAGCCAACAA+AGG | + | chr1.4:82644554-82644573 | None:intergenic | 45.0% | |
| GCCCTTTGGACTTGATTACT+TGG | + | chr1.4:82647639-82647658 | None:intergenic | 45.0% | |
| GCTCCGATATCAAAACCCAT+TGG | + | chr1.4:82645950-82645969 | None:intergenic | 45.0% | |
| GTTCTACCACGGAGCATAAA+CGG | - | chr1.4:82644618-82644637 | MS.gene71658:intron | 45.0% | |
| GTTTATGCTCCGTGGTAGAA+CGG | + | chr1.4:82644619-82644638 | None:intergenic | 45.0% | |
| TAAGTACTTGCGAGACGGTT+TGG | + | chr1.4:82645105-82645124 | None:intergenic | 45.0% | |
| TCTGCTTTACCGTTCTACCA+CGG | - | chr1.4:82644607-82644626 | MS.gene71658:intron | 45.0% | |
| TGTTCTTGTTAGGCCCTGTT+TGG | - | chr1.4:82644861-82644880 | MS.gene71658:intron | 45.0% | |
| TTCTACCACGGAGCATAAAC+GGG | - | chr1.4:82644619-82644638 | MS.gene71658:intron | 45.0% | |
| TTGGCGCTGCCAAAATGATA+AGG | - | chr1.4:82647233-82647252 | MS.gene71658:intron | 45.0% | |
| TTTAAATGGGCCCCCACTAA+TGG | - | chr1.4:82645401-82645420 | MS.gene71658:intron | 45.0% | |
| TTTCACGACAGTCTCGGATT+TGG | - | chr1.4:82647214-82647233 | MS.gene71658:intron | 45.0% | |
| ! | AGTCCATACAGAGCTTGCTT+TGG | - | chr1.4:82645377-82645396 | MS.gene71658:intron | 45.0% |
| ! | CGAGTTTGGATGAAAGTGCA+GGG | + | chr1.4:82644132-82644151 | None:intergenic | 45.0% |
| ! | CTCAGAAAAGGGTTGATTGC+TGG | - | chr1.4:82644518-82644537 | MS.gene71658:intron | 45.0% |
| ! | CTTGACACGAACAGGTGTTT+TGG | + | chr1.4:82647830-82647849 | None:intergenic | 45.0% |
| ! | GTCATTGGCGTTGAAAGAAG+AGG | - | chr1.4:82644400-82644419 | MS.gene71658:intron | 45.0% |
| ! | TCGAGTTTGGATGAAAGTGC+AGG | + | chr1.4:82644133-82644152 | None:intergenic | 45.0% |
| ! | TGCTGAATTTTGCGGGAATG+TGG | - | chr1.4:82645569-82645588 | MS.gene71658:intron | 45.0% |
| ! | TTTGGATGAAAGTGCAGGGA+TGG | + | chr1.4:82644128-82644147 | None:intergenic | 45.0% |
| !! | AACATTGGTTCCTTGACGTG+TGG | - | chr1.4:82644814-82644833 | MS.gene71658:intron | 45.0% |
| !! | GATTGATCTCCCGGATTAGT+AGG | - | chr1.4:82645431-82645450 | MS.gene71658:intron | 45.0% |
| !! | GCATAAAAATGGTGCTGGTG+AGG | - | chr1.4:82647120-82647139 | MS.gene71658:intron | 45.0% |
| !! | TCTACACACTGGTTCTGTGA+TGG | - | chr1.4:82645874-82645893 | MS.gene71658:intron | 45.0% |
| !!! | TTTTTTCTATTTTTAATAAT+GGG | - | chr1.4:82644293-82644312 | MS.gene71658:intron | 5.0% |
| AAGAGTAGAGCTCCCAGCTA+TGG | - | chr1.4:82646524-82646543 | MS.gene71658:CDS | 50.0% | |
| AATCGCACCGTCCATTAGTG+GGG | + | chr1.4:82645415-82645434 | None:intergenic | 50.0% | |
| ACTCTGGACTTGACACGAAC+AGG | + | chr1.4:82647838-82647857 | None:intergenic | 50.0% | |
| AGGGCTCAGGCACTAATACA+CGG | - | chr1.4:82645848-82645867 | MS.gene71658:intron | 50.0% | |
| CAATCGCACCGTCCATTAGT+GGG | + | chr1.4:82645416-82645435 | None:intergenic | 50.0% | |
| CAGCATCACGGTCAAGATGA+GGG | + | chr1.4:82645668-82645687 | None:intergenic | 50.0% | |
| CCAGATCAACATGCATGCCA+AGG | + | chr1.4:82646418-82646437 | None:intergenic | 50.0% | |
| CCTTGGCATGCATGTTGATC+TGG | - | chr1.4:82646415-82646434 | MS.gene71658:intron | 50.0% | |
| CGATTGACAACCACACGTCA+AGG | + | chr1.4:82644827-82644846 | None:intergenic | 50.0% | |
| CTATAGCCGACGCTGGTAAA+CGG | - | chr1.4:82647980-82647999 | MS.gene71658:CDS | 50.0% | |
| CTGCTCAAACAAGAGCCCTT+TGG | + | chr1.4:82647653-82647672 | None:intergenic | 50.0% | |
| CTTGAATCTATAGCCGACGC+TGG | - | chr1.4:82647973-82647992 | MS.gene71658:CDS | 50.0% | |
| CTTGAGAGGATCACACTCCA+AGG | + | chr1.4:82645316-82645335 | None:intergenic | 50.0% | |
| CTTGGAGTGTGATCCTCTCA+AGG | - | chr1.4:82645314-82645333 | MS.gene71658:intron | 50.0% | |
| GCCATCTCCGACTTCTTTGA+CGG | + | chr1.4:82644176-82644195 | None:intergenic | 50.0% | |
| GGAAGAAGCTATCTTGCCCA+AGG | - | chr1.4:82646545-82646564 | MS.gene71658:CDS | 50.0% | |
| GGCCTGTGTGAATAGACTTG+TGG | - | chr1.4:82646711-82646730 | MS.gene71658:intron | 50.0% | |
| GTAAACGGGCAACCTGTGAA+CGG | - | chr1.4:82647995-82648014 | MS.gene71658:CDS | 50.0% | |
| GTTCTCATGCTTTGCCTGCA+TGG | - | chr1.4:82646350-82646369 | MS.gene71658:intron | 50.0% | |
| TATAGCCGACGCTGGTAAAC+GGG | - | chr1.4:82647981-82648000 | MS.gene71658:CDS | 50.0% | |
| TCAATCGCACCGTCCATTAG+TGG | + | chr1.4:82645417-82645436 | None:intergenic | 50.0% | |
| TCAGCATCACGGTCAAGATG+AGG | + | chr1.4:82645669-82645688 | None:intergenic | 50.0% | |
| TCATCTTGACCGTGATGCTG+AGG | - | chr1.4:82645668-82645687 | MS.gene71658:intron | 50.0% | |
| TCCGTCAAAGAAGTCGGAGA+TGG | - | chr1.4:82644172-82644191 | MS.gene71658:CDS | 50.0% | |
| TCCTCTCAAGGTCTCAGGTT+CGG | - | chr1.4:82645326-82645345 | MS.gene71658:intron | 50.0% | |
| TGTGATCCTCTCAAGGTCTC+AGG | - | chr1.4:82645321-82645340 | MS.gene71658:intron | 50.0% | |
| TGTTGGTGTGGCACATGTTG+AGG | - | chr1.4:82647948-82647967 | MS.gene71658:CDS | 50.0% | |
| ! | CAAAGGGCTCTTGTTTGAGC+AGG | - | chr1.4:82647651-82647670 | MS.gene71658:CDS | 50.0% |
| !! | GTGGTGTAGGCTTTAGACCT+TGG | - | chr1.4:82645296-82645315 | MS.gene71658:intron | 50.0% |
| AATGGGCCCCCACTAATGGA+CGG | - | chr1.4:82645405-82645424 | MS.gene71658:intron | 55.0% | |
| ACCACGGAGCATAAACGGGA+CGG | - | chr1.4:82644623-82644642 | MS.gene71658:intron | 55.0% | |
| ACCGTGATGCTGAGGCTGTT+CGG | - | chr1.4:82645676-82645695 | MS.gene71658:intron | 55.0% | |
| ATCGCACCGTCCATTAGTGG+GGG | + | chr1.4:82645414-82645433 | None:intergenic | 55.0% | |
| GCCTAACACAGCCAGTAGAG+CGG | + | chr1.4:82646694-82646713 | None:intergenic | 55.0% | |
| GCGGGAATGTGGAGTTATGC+AGG | - | chr1.4:82645580-82645599 | MS.gene71658:intron | 55.0% | |
| GCTGGTGAGGCATATCTTCC+AGG | - | chr1.4:82647133-82647152 | MS.gene71658:intron | 55.0% | |
| GGCCAACGACCTACTAATCC+GGG | + | chr1.4:82645443-82645462 | None:intergenic | 55.0% | |
| GGGCCAACGACCTACTAATC+CGG | + | chr1.4:82645444-82645463 | None:intergenic | 55.0% | |
| GTCTCAGGTTCGGATCCTCA+TGG | - | chr1.4:82645336-82645355 | MS.gene71658:intron | 55.0% | |
| GTTATGCAGGCTCACTGAGC+AGG | - | chr1.4:82645593-82645612 | MS.gene71658:intron | 55.0% | |
| TAGGTTCTGTGAGAGGGCTC+AGG | - | chr1.4:82645835-82645854 | MS.gene71658:intron | 55.0% | |
| TCCGAACCTGAGACCTTGAG+AGG | + | chr1.4:82645330-82645349 | None:intergenic | 55.0% | |
| ! | GGATTAGTAGGTCGTTGGCC+CGG | - | chr1.4:82645443-82645462 | MS.gene71658:intron | 55.0% |
| ! | GGTCTAAAGCCTACACCACC+AGG | + | chr1.4:82645295-82645314 | None:intergenic | 55.0% |
| ! | TCCGCTCTACTGGCTGTGTT+AGG | - | chr1.4:82646690-82646709 | MS.gene71658:intron | 55.0% |
| !! | ATAACCCACATGGGCTAGCC+TGG | - | chr1.4:82645274-82645293 | MS.gene71658:intron | 55.0% |
| !! | CTCCCGGATTAGTAGGTCGT+TGG | - | chr1.4:82645438-82645457 | MS.gene71658:intron | 55.0% |
| AACGGGCAACCTGTGAACGG+CGG | - | chr1.4:82647998-82648017 | MS.gene71658:CDS | 60.0% | |
| ACCGTCCCGTTTATGCTCCG+TGG | + | chr1.4:82644627-82644646 | None:intergenic | 60.0% | |
| ATCAAGTGCCCGCCGTTCAC+AGG | + | chr1.4:82648010-82648029 | None:intergenic | 60.0% | |
| CCCGAACAGCCTCAGCATCA+CGG | + | chr1.4:82645680-82645699 | None:intergenic | 60.0% | |
| CCGTGATGCTGAGGCTGTTC+GGG | - | chr1.4:82645677-82645696 | MS.gene71658:intron | 60.0% | |
| GGACGGTGCGATTGATCTCC+CGG | - | chr1.4:82645422-82645441 | MS.gene71658:intron | 60.0% | |
| GGTTGCCCGTTTACCAGCGT+CGG | + | chr1.4:82647989-82648008 | None:intergenic | 60.0% | |
| GTCAGGGCACGGTGATACTC+TGG | + | chr1.4:82647854-82647873 | None:intergenic | 60.0% | |
| ! | ACCACCAGGCTAGCCCATGT+GGG | + | chr1.4:82645281-82645300 | None:intergenic | 60.0% |
| !! | ATGGGCTAGCCTGGTGGTGT+AGG | - | chr1.4:82645283-82645302 | MS.gene71658:intron | 60.0% |
| ACGGGCAACCTGTGAACGGC+GGG | - | chr1.4:82647999-82648018 | MS.gene71658:CDS | 65.0% | |
| ! | CACCACCAGGCTAGCCCATG+TGG | + | chr1.4:82645282-82645301 | None:intergenic | 65.0% |
| !! | ACCCACATGGGCTAGCCTGG+TGG | - | chr1.4:82645277-82645296 | MS.gene71658:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 82644064 | 82648107 | 82644064 | ID=MS.gene71658 |
| chr1.4 | mRNA | 82644064 | 82648107 | 82644064 | ID=MS.gene71658.t1;Parent=MS.gene71658 |
| chr1.4 | exon | 82647919 | 82648107 | 82647919 | ID=MS.gene71658.t1.exon1;Parent=MS.gene71658.t1 |
| chr1.4 | CDS | 82647919 | 82648107 | 82647919 | ID=cds.MS.gene71658.t1;Parent=MS.gene71658.t1 |
| chr1.4 | exon | 82647527 | 82647836 | 82647527 | ID=MS.gene71658.t1.exon2;Parent=MS.gene71658.t1 |
| chr1.4 | CDS | 82647527 | 82647836 | 82647527 | ID=cds.MS.gene71658.t1;Parent=MS.gene71658.t1 |
| chr1.4 | exon | 82646429 | 82646603 | 82646429 | ID=MS.gene71658.t1.exon3;Parent=MS.gene71658.t1 |
| chr1.4 | CDS | 82646429 | 82646603 | 82646429 | ID=cds.MS.gene71658.t1;Parent=MS.gene71658.t1 |
| chr1.4 | exon | 82646132 | 82646333 | 82646132 | ID=MS.gene71658.t1.exon4;Parent=MS.gene71658.t1 |
| chr1.4 | CDS | 82646132 | 82646333 | 82646132 | ID=cds.MS.gene71658.t1;Parent=MS.gene71658.t1 |
| chr1.4 | exon | 82644917 | 82645131 | 82644917 | ID=MS.gene71658.t1.exon5;Parent=MS.gene71658.t1 |
| chr1.4 | CDS | 82644917 | 82645131 | 82644917 | ID=cds.MS.gene71658.t1;Parent=MS.gene71658.t1 |
| chr1.4 | exon | 82644064 | 82644229 | 82644064 | ID=MS.gene71658.t1.exon6;Parent=MS.gene71658.t1 |
| chr1.4 | CDS | 82644064 | 82644229 | 82644064 | ID=cds.MS.gene71658.t1;Parent=MS.gene71658.t1 |
| Gene Sequence |
| Protein sequence |
