Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71850.t1 | XP_013470199.1 | 96.3 | 464 | 11 | 1 | 1 | 464 | 13 | 470 | 5.90E-217 | 763.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71850.t1 | Q9SQI8 | 73.3 | 465 | 117 | 3 | 2 | 464 | 21 | 480 | 3.0e-153 | 543.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71850.t1 | A0A072VR15 | 96.3 | 464 | 11 | 1 | 1 | 464 | 13 | 470 | 4.2e-217 | 763.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71850 | MS.gene51623 | PPI |
| MS.gene71850 | MS.gene56252 | PPI |
| MS.gene71850 | MS.gene84379 | PPI |
| MS.gene71850 | MS.gene009450 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71850.t1 | MTR_1g111140 | 95.931 | 467 | 10 | 3 | 1 | 464 | 10 | 470 | 0.0 | 886 |
| MS.gene71850.t1 | MTR_1g096240 | 63.333 | 450 | 146 | 5 | 21 | 464 | 21 | 457 | 3.06e-177 | 504 |
| MS.gene71850.t1 | MTR_8g018770 | 34.076 | 449 | 255 | 13 | 37 | 464 | 115 | 543 | 9.92e-64 | 215 |
| MS.gene71850.t1 | MTR_1g091037 | 31.891 | 439 | 266 | 11 | 41 | 464 | 205 | 625 | 3.10e-51 | 183 |
| MS.gene71850.t1 | MTR_1g091037 | 44.872 | 78 | 42 | 1 | 41 | 117 | 79 | 156 | 1.82e-12 | 69.7 |
| MS.gene71850.t1 | MTR_1g091037 | 31.891 | 439 | 266 | 11 | 41 | 464 | 213 | 633 | 3.49e-51 | 183 |
| MS.gene71850.t1 | MTR_1g091037 | 44.872 | 78 | 42 | 1 | 41 | 117 | 87 | 164 | 1.84e-12 | 69.7 |
| MS.gene71850.t1 | MTR_4g120220 | 27.189 | 434 | 294 | 7 | 48 | 464 | 89 | 517 | 1.80e-29 | 121 |
| MS.gene71850.t1 | MTR_5g093300 | 25.175 | 429 | 256 | 11 | 38 | 464 | 88 | 453 | 2.48e-28 | 117 |
| MS.gene71850.t1 | MTR_2g006820 | 24.545 | 440 | 246 | 9 | 38 | 464 | 85 | 451 | 4.01e-28 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71850.t1 | AT3G25860 | 72.043 | 465 | 123 | 3 | 2 | 464 | 21 | 480 | 0.0 | 618 |
| MS.gene71850.t1 | AT1G34430 | 59.283 | 474 | 164 | 5 | 7 | 464 | 5 | 465 | 3.87e-175 | 499 |
| MS.gene71850.t1 | AT1G54220 | 34.703 | 438 | 266 | 8 | 37 | 464 | 112 | 539 | 1.16e-65 | 220 |
| MS.gene71850.t1 | AT1G54220 | 34.703 | 438 | 266 | 8 | 37 | 464 | 112 | 539 | 1.16e-65 | 220 |
| MS.gene71850.t1 | AT3G13930 | 33.941 | 439 | 268 | 9 | 37 | 464 | 112 | 539 | 8.72e-61 | 207 |
| MS.gene71850.t1 | AT3G52200 | 32.207 | 444 | 258 | 11 | 41 | 464 | 217 | 637 | 2.39e-52 | 187 |
| MS.gene71850.t1 | AT3G52200 | 36.000 | 125 | 75 | 2 | 41 | 160 | 90 | 214 | 4.13e-15 | 78.2 |
| MS.gene71850.t1 | AT3G52200 | 32.346 | 439 | 264 | 10 | 41 | 464 | 293 | 713 | 5.93e-52 | 187 |
| MS.gene71850.t1 | AT3G52200 | 36.000 | 125 | 75 | 2 | 41 | 160 | 166 | 290 | 2.37e-15 | 79.0 |
| MS.gene71850.t1 | AT4G26910 | 25.214 | 468 | 274 | 14 | 12 | 464 | 55 | 461 | 6.89e-30 | 121 |
| MS.gene71850.t1 | AT4G26910 | 25.349 | 430 | 257 | 12 | 38 | 464 | 94 | 462 | 7.46e-30 | 121 |
| MS.gene71850.t1 | AT4G26910 | 25.236 | 424 | 253 | 12 | 44 | 464 | 1 | 363 | 2.51e-29 | 118 |
| MS.gene71850.t1 | AT3G06850 | 25.635 | 433 | 267 | 9 | 48 | 464 | 87 | 480 | 1.22e-28 | 118 |
| MS.gene71850.t1 | AT3G06850 | 25.635 | 433 | 267 | 9 | 48 | 464 | 87 | 480 | 1.22e-28 | 118 |
| MS.gene71850.t1 | AT5G55070 | 33.155 | 187 | 118 | 4 | 280 | 464 | 281 | 462 | 3.37e-21 | 96.3 |
| MS.gene71850.t1 | AT5G55070 | 33.155 | 187 | 118 | 4 | 280 | 464 | 281 | 462 | 3.37e-21 | 96.3 |
Find 138 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTTCACGCTTTCCAATT+TGG | 0.148648 | 1.3:+75784723 | MS.gene71850:CDS |
| GCTGATCACCGAATAATTTA+TGG | 0.190235 | 1.3:+75787007 | MS.gene71850:CDS |
| TGCTGCACCAGCTGCGATTC+CGG | 0.219139 | 1.3:+75783726 | MS.gene71850:CDS |
| CAACCAAATGAGTATAATTC+AGG | 0.242664 | 1.3:+75784614 | MS.gene71850:CDS |
| GGGAGGAGCGGTGAGGGAGG+AGG | 0.245830 | 1.3:-75783069 | None:intergenic |
| TGTGACGATGACTGCTATTT+TGG | 0.262165 | 1.3:+75784297 | MS.gene71850:CDS |
| AACTCCAAACATACCCAAAT+TGG | 0.269101 | 1.3:-75784737 | None:intergenic |
| GCGGATGTGGAGGCTGCTGC+TGG | 0.275235 | 1.3:+75783628 | MS.gene71850:CDS |
| AAAGTTCTTGCCATCTTTGC+AGG | 0.290313 | 1.3:-75784368 | None:intergenic |
| ACTTTCACGCTTTCCAATTT+GGG | 0.319099 | 1.3:+75784724 | MS.gene71850:CDS |
| CTTTCCAATTTGGGTATGTT+TGG | 0.319328 | 1.3:+75784733 | MS.gene71850:CDS |
| AAACCTGAATTATACTCATT+TGG | 0.322353 | 1.3:-75784617 | None:intergenic |
| CTTGATAACTCCAGTTCTTC+AGG | 0.323849 | 1.3:+75784441 | MS.gene71850:CDS |
| AGGTGTCGCTGTGATATTCT+TGG | 0.331912 | 1.3:-75783524 | None:intergenic |
| GCTGCACCAGCTGCGATTCC+GGG | 0.340411 | 1.3:+75783727 | MS.gene71850:CDS |
| TGAAGAATAACTATAATGTT+AGG | 0.344401 | 1.3:-75787087 | None:intergenic |
| AACCTGGCCTGGTGGAAGTA+TGG | 0.348432 | 1.3:-75784773 | None:intergenic |
| GGAAAAGGATTTGCGGGGAG+GGG | 0.354418 | 1.3:-75783089 | None:intergenic |
| GAGGGGAGGAGCGGTGAGGG+AGG | 0.354889 | 1.3:-75783072 | None:intergenic |
| CTGTTCCTACTTTCCGTGTT+GGG | 0.363238 | 1.3:+75783815 | MS.gene71850:CDS |
| TGAATCTGATAAGGCTGATA+TGG | 0.376491 | 1.3:+75783243 | MS.gene71850:CDS |
| GCCGCCGGTGGAGGCGGTGG+TGG | 0.387927 | 1.3:-75783478 | None:intergenic |
| TCAAGAGCATCAGTGATAAC+TGG | 0.389979 | 1.3:-75783841 | None:intergenic |
| CGCCGGAGGAGGAGAGGAAG+AGG | 0.399022 | 1.3:-75783425 | None:intergenic |
| GGAGGAGAGTGGTGAATTGA+GGG | 0.399212 | 1.3:-75783051 | None:intergenic |
| AGGAGGAGAGTGGTGAATTG+AGG | 0.399224 | 1.3:-75783052 | None:intergenic |
| TTTGAAGGAAAAGGATTTGC+GGG | 0.403176 | 1.3:-75783095 | None:intergenic |
| CGGATTTGACGGATTTAGCC+TGG | 0.408800 | 1.3:-75783390 | None:intergenic |
| TTATCAGCATCCTGAAGAAC+TGG | 0.417467 | 1.3:-75784451 | None:intergenic |
| GCTCCGGTTGGTGCTCCAAT+TGG | 0.424384 | 1.3:+75783325 | MS.gene71850:CDS |
| GCCGGTGGAGGCGGTGGTGG+AGG | 0.425148 | 1.3:-75783475 | None:intergenic |
| ACCGCCGCCGGTGGAGGCGG+TGG | 0.426146 | 1.3:-75783481 | None:intergenic |
| AGTTCTTCAGGATGCTGATA+AGG | 0.430433 | 1.3:+75784453 | MS.gene71850:CDS |
| AGTCAGCTCCATAAATTATT+CGG | 0.431962 | 1.3:-75787015 | None:intergenic |
| CGGGGAGGGGAGGAGCGGTG+AGG | 0.432565 | 1.3:-75783076 | None:intergenic |
| TTAACCGCCGCCGGTGGAGG+CGG | 0.434204 | 1.3:-75783484 | None:intergenic |
| AAAGGATTTGCGGGGAGGGG+AGG | 0.434206 | 1.3:-75783086 | None:intergenic |
| TTGCAGGTGGCATTAACAAC+TGG | 0.437102 | 1.3:-75784352 | None:intergenic |
| GGTGGAGGCGGTGGTGGAGG+AGG | 0.439450 | 1.3:-75783472 | None:intergenic |
| GCAGTCATCGTCACACCCTT+AGG | 0.441303 | 1.3:-75784289 | None:intergenic |
| TCCTCCTCCGGCGACTCCTC+AGG | 0.441707 | 1.3:+75783435 | MS.gene71850:CDS |
| TAGGATTACTCCGGCGGATG+TGG | 0.442153 | 1.3:+75783615 | MS.gene71850:CDS |
| CCTTTAGGCGCGGTGGGAGC+AGG | 0.450725 | 1.3:-75783691 | None:intergenic |
| CCTGCTCCCACCGCGCCTAA+AGG | 0.451441 | 1.3:+75783691 | MS.gene71850:CDS |
| TCTGTTCCTACTTTCCGTGT+TGG | 0.452700 | 1.3:+75783814 | MS.gene71850:CDS |
| AACAACGACACTATCACCTT+TGG | 0.458858 | 1.3:-75783218 | None:intergenic |
| GTTAATGCCACCTGCAAAGA+TGG | 0.461294 | 1.3:+75784358 | MS.gene71850:CDS |
| AGGAAAAGGATTTGCGGGGA+GGG | 0.466496 | 1.3:-75783090 | None:intergenic |
| GTCAATGGGACTGGTCCGTT+TGG | 0.467430 | 1.3:+75783592 | MS.gene71850:CDS |
| TTCCTCTTCCTCTCCTCCTC+CGG | 0.468287 | 1.3:+75783423 | MS.gene71850:CDS |
| GTTTCAGCAAGTAAACCAAT+TGG | 0.469325 | 1.3:-75783340 | None:intergenic |
| TGTATCTGTTGTCTCAAAAG+TGG | 0.473862 | 1.3:+75784555 | MS.gene71850:CDS |
| TGCCATACTTCCACCAGGCC+AGG | 0.474712 | 1.3:+75784771 | MS.gene71850:CDS |
| CGTTGTTGTTGAATCTGATA+AGG | 0.474840 | 1.3:+75783234 | MS.gene71850:CDS |
| AGAAGAAGAAGCGGATTTGA+CGG | 0.475207 | 1.3:-75783401 | None:intergenic |
| GCAGTAGAAGAACCACCTTT+AGG | 0.475879 | 1.3:-75783706 | None:intergenic |
| TTTGGAGAGAGTGTCGCCTT+CGG | 0.478453 | 1.3:-75783200 | None:intergenic |
| CGGATGTGGAGGCTGCTGCT+GGG | 0.484662 | 1.3:+75783629 | MS.gene71850:CDS |
| TCCTGAGGAGTCGCCGGAGG+AGG | 0.486371 | 1.3:-75783436 | None:intergenic |
| ATTTGCGGGGAGGGGAGGAG+CGG | 0.486564 | 1.3:-75783081 | None:intergenic |
| GGGGAGGGGAGGAGCGGTGA+GGG | 0.488786 | 1.3:-75783075 | None:intergenic |
| GCGGTGAGGGAGGAGGAGAG+TGG | 0.492755 | 1.3:-75783062 | None:intergenic |
| GTTGACATTGCATCAGTCAA+TGG | 0.493986 | 1.3:+75783577 | MS.gene71850:CDS |
| GACTTAACCGCCGCCGGTGG+AGG | 0.494592 | 1.3:-75783487 | None:intergenic |
| AAACCAATTGGAGCACCAAC+CGG | 0.494669 | 1.3:-75783328 | None:intergenic |
| AATAATTTATGGAGCTGACT+TGG | 0.504990 | 1.3:+75787018 | MS.gene71850:CDS |
| CCGAGGGTAAAATCGTCTCT+TGG | 0.507291 | 1.3:+75783170 | MS.gene71850:CDS |
| TCCTCCACCACCGCCTCCAC+CGG | 0.509369 | 1.3:+75783474 | MS.gene71850:CDS |
| AAATAAGCACTAACCTGGCC+TGG | 0.510203 | 1.3:-75784784 | None:intergenic |
| TTTGGCGAAGGCTGTAGCTA+TGG | 0.511396 | 1.3:+75784315 | MS.gene71850:CDS |
| TTGACATTGCATCAGTCAAT+GGG | 0.511963 | 1.3:+75783578 | MS.gene71850:CDS |
| CAGAGTGAAAAGTAAAATGC+TGG | 0.512136 | 1.3:+75784966 | MS.gene71850:CDS |
| GAAGCTTGCAAAGCAGCATA+AGG | 0.516061 | 1.3:+75783555 | MS.gene71850:CDS |
| GGTGTCGCTGTGATATTCTT+GGG | 0.516252 | 1.3:-75783523 | None:intergenic |
| AGATTTCACGGATCTTAGCT+TGG | 0.518622 | 1.3:-75783120 | None:intergenic |
| CAAAAGTGGAAAGAACTAGT+TGG | 0.519897 | 1.3:+75784569 | MS.gene71850:CDS |
| ATGGGACTGGTCCGTTTGGT+AGG | 0.522274 | 1.3:+75783596 | MS.gene71850:CDS |
| TTTGCAAGCTTCTTCGCTTG+AGG | 0.523490 | 1.3:-75783544 | None:intergenic |
| GGAAGAGGAAGAAGAAGAAG+CGG | 0.527687 | 1.3:-75783410 | None:intergenic |
| ACCACCGCCTCCACCGGCGG+CGG | 0.527835 | 1.3:+75783480 | MS.gene71850:CDS |
| CTCGAACCCGGAATCGCAGC+TGG | 0.528731 | 1.3:-75783733 | None:intergenic |
| CAATAGTAACATTAATGTTG+CGG | 0.528854 | 1.3:+75784396 | MS.gene71850:CDS |
| TGCTGTTGCTAAGAATATGA+TGG | 0.531804 | 1.3:+75783783 | MS.gene71850:CDS |
| GCTCCCACCGCGCCTAAAGG+TGG | 0.537172 | 1.3:+75783694 | MS.gene71850:CDS |
| ACTGTTCTTGCTGATACAGA+TGG | 0.538342 | 1.3:+75784937 | MS.gene71850:CDS |
| GTGCAGGCATGAAGATTTCA+CGG | 0.539099 | 1.3:-75783132 | None:intergenic |
| AGGAGTCGCCGGAGGAGGAG+AGG | 0.540356 | 1.3:-75783431 | None:intergenic |
| GCGGTTAAGTCTGTTTCCGA+TGG | 0.542027 | 1.3:+75783499 | MS.gene71850:CDS |
| CGACGAAGGCGAAACAGCTC+CGG | 0.544268 | 1.3:+75783309 | MS.gene71850:CDS |
| AAGGAAAAGGATTTGCGGGG+AGG | 0.547486 | 1.3:-75783091 | None:intergenic |
| GTGGAAAGAACTAGTTGGAA+AGG | 0.549323 | 1.3:+75784574 | MS.gene71850:CDS |
| GCCGCTATCGTTGTCGACGA+AGG | 0.556593 | 1.3:+75783295 | MS.gene71850:CDS |
| TATCGCTGAAGCTCAAGCCC+AGG | 0.558264 | 1.3:+75783372 | MS.gene71850:CDS |
| TCTTGATGCTTTCTATGAGA+AGG | 0.560121 | 1.3:+75783858 | MS.gene71850:CDS |
| GGTGATGAGTAATGTAGCTC+CGG | 0.561935 | 1.3:+75783660 | MS.gene71850:CDS |
| GAAGTTTCCTGAGGAGTCGC+CGG | 0.562506 | 1.3:-75783442 | None:intergenic |
| GTCATAGTGGAACTGAGTGC+AGG | 0.565894 | 1.3:-75783148 | None:intergenic |
| GATTACTCCGGCGGATGTGG+AGG | 0.566437 | 1.3:+75783618 | MS.gene71850:CDS |
| GGATACCCAACACGGAAAGT+AGG | 0.566850 | 1.3:-75783820 | None:intergenic |
| GAACCACCTTTAGGCGCGGT+GGG | 0.571512 | 1.3:-75783697 | None:intergenic |
| TTTAGAGAATGTCTGAAGGA+AGG | 0.571872 | 1.3:-75787044 | None:intergenic |
| TGTGATATTCTTGGGACCAT+CGG | 0.577315 | 1.3:-75783515 | None:intergenic |
| GCAGCAGCCTCCACATCCGC+CGG | 0.578668 | 1.3:-75783625 | None:intergenic |
| TCTGTATCAGCAAGAACAGT+GGG | 0.580486 | 1.3:-75784934 | None:intergenic |
| GTGGGAGCAGGAGTCGCCAC+CGG | 0.583580 | 1.3:-75783679 | None:intergenic |
| ATTGCATCAGTCAATGGGAC+TGG | 0.584574 | 1.3:+75783583 | MS.gene71850:CDS |
| GGATTTGACGGATTTAGCCT+GGG | 0.588827 | 1.3:-75783389 | None:intergenic |
| GAGGAGAGTGGTGAATTGAG+GGG | 0.588927 | 1.3:-75783050 | None:intergenic |
| GCCGGAGTAATCCTACCAAA+CGG | 0.596459 | 1.3:-75783607 | None:intergenic |
| GTTCTTGCCATCTTTGCAGG+TGG | 0.598180 | 1.3:-75784365 | None:intergenic |
| CATTAATGTTGCGGTTGCTG+TGG | 0.599216 | 1.3:+75784405 | MS.gene71850:CDS |
| GCGGTTGCTGTGGCAATCAA+CGG | 0.599221 | 1.3:+75784415 | MS.gene71850:CDS |
| TCCACCACCGCCTCCACCGG+CGG | 0.601506 | 1.3:+75783477 | MS.gene71850:CDS |
| TCCGTTTGGTAGGATTACTC+CGG | 0.603724 | 1.3:+75783606 | MS.gene71850:CDS |
| AGAACCACCTTTAGGCGCGG+TGG | 0.612275 | 1.3:-75783698 | None:intergenic |
| GAAACAGACTTAACCGCCGC+CGG | 0.613417 | 1.3:-75783493 | None:intergenic |
| ACAGACTTAACCGCCGCCGG+TGG | 0.613983 | 1.3:-75783490 | None:intergenic |
| CTCAGTTCCACTATGACCGA+GGG | 0.618720 | 1.3:+75783154 | MS.gene71850:CDS |
| GCCTTCGTCGACAACGATAG+CGG | 0.619826 | 1.3:-75783296 | None:intergenic |
| GGAGCTACATTACTCATCAC+CGG | 0.621644 | 1.3:-75783658 | None:intergenic |
| GTCTCTTGGATCAAATCCGA+AGG | 0.623986 | 1.3:+75783184 | MS.gene71850:CDS |
| TTGAAGGAAAAGGATTTGCG+GGG | 0.626517 | 1.3:-75783094 | None:intergenic |
| GACGTTGAAACTTTCTACGA+CGG | 0.630695 | 1.3:+75783265 | MS.gene71850:CDS |
| GTTTCCTGAGGAGTCGCCGG+AGG | 0.633462 | 1.3:-75783439 | None:intergenic |
| ACTCAGTTCCACTATGACCG+AGG | 0.633716 | 1.3:+75783153 | MS.gene71850:CDS |
| GATGAGTAATGTAGCTCCGG+TGG | 0.634350 | 1.3:+75783663 | MS.gene71850:CDS |
| TTTGATGCCATACTTCCACC+AGG | 0.635423 | 1.3:+75784766 | MS.gene71850:CDS |
| GTTTGGTAGGATTACTCCGG+CGG | 0.637694 | 1.3:+75783609 | MS.gene71850:CDS |
| GGCTGCTGCTGGGATTACAC+CGG | 0.642960 | 1.3:+75783639 | MS.gene71850:CDS |
| GAAGGCGACACTCTCTCCAA+AGG | 0.645069 | 1.3:+75783202 | MS.gene71850:CDS |
| GAAGGCGAAACAGCTCCGGT+TGG | 0.650328 | 1.3:+75783313 | MS.gene71850:CDS |
| TAAGCACTAACCTGGCCTGG+TGG | 0.654901 | 1.3:-75784781 | None:intergenic |
| ATCTGTATCAGCAAGAACAG+TGG | 0.662950 | 1.3:-75784935 | None:intergenic |
| AAAGCAACATTACTCGAACC+CGG | 0.665722 | 1.3:-75783745 | None:intergenic |
| GGAGACTGAGAAGTTTCCTG+AGG | 0.667713 | 1.3:-75783451 | None:intergenic |
| GTTGCTGTGGCAATCAACGG+TGG | 0.689072 | 1.3:+75784418 | MS.gene71850:CDS |
| AGAAGAACCACCTTTAGGCG+CGG | 0.690205 | 1.3:-75783701 | None:intergenic |
| TGATAACTGGATACCCAACA+CGG | 0.715114 | 1.3:-75783828 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAAATATTATTATTGTAT+TGG | + | chr1.3:75783969-75783988 | MS.gene71850:intron | 10.0% |
| !! | TAATTTATAAAATTTGAACA+CGG | - | chr1.3:75786713-75786732 | None:intergenic | 10.0% |
| !!! | ATTGTTTAATTTGAAAATTT+AGG | + | chr1.3:75784183-75784202 | MS.gene71850:intron | 10.0% |
| !!! | ATTGTTTGATTTTTAAATTT+TGG | + | chr1.3:75783931-75783950 | MS.gene71850:intron | 10.0% |
| !! | ATTGAATATTATTGTTGTAT+TGG | + | chr1.3:75784225-75784244 | MS.gene71850:intron | 15.0% |
| !!! | AACATTTTCTTAATAGAATA+AGG | + | chr1.3:75785075-75785094 | MS.gene71850:intron | 15.0% |
| !!! | AATTTTAAATTATATCTGAG+TGG | + | chr1.3:75785211-75785230 | MS.gene71850:intron | 15.0% |
| !!! | TCAGATATAATTTAAAATTC+AGG | - | chr1.3:75785210-75785229 | None:intergenic | 15.0% |
| !! | AAAATCTTATAACTATGCAA+TGG | - | chr1.3:75786427-75786446 | None:intergenic | 20.0% |
| !! | AACATACTATATTATATGCA+TGG | + | chr1.3:75785767-75785786 | MS.gene71850:intron | 20.0% |
| !! | AAGACTTTATTATACAATAG+AGG | - | chr1.3:75785545-75785564 | None:intergenic | 20.0% |
| !! | ATATCAATCACAATCAAAAT+AGG | + | chr1.3:75786343-75786362 | MS.gene71850:intron | 20.0% |
| !! | ATCATGATAGATGTATTATT+TGG | + | chr1.3:75786822-75786841 | MS.gene71850:intron | 20.0% |
| !! | ATCTTAAAATTCATAAAGTG+CGG | + | chr1.3:75785406-75785425 | MS.gene71850:intron | 20.0% |
| !! | CATAGTAAAGAAATAGTATA+TGG | + | chr1.3:75786209-75786228 | MS.gene71850:intron | 20.0% |
| !! | TAAGAACAAATGATTTCATA+TGG | - | chr1.3:75786926-75786945 | None:intergenic | 20.0% |
| !! | TAATTTGAAAATTTAGGTGA+TGG | + | chr1.3:75784189-75784208 | MS.gene71850:intron | 20.0% |
| !! | TTGAGAAATAGAAAATTCAT+AGG | - | chr1.3:75785432-75785451 | None:intergenic | 20.0% |
| !!! | AAGATTAGAAAAAAGCATTA+TGG | - | chr1.3:75785391-75785410 | None:intergenic | 20.0% |
| !!! | CATATACTATTTCTTTACTA+TGG | - | chr1.3:75786211-75786230 | None:intergenic | 20.0% |
| !!! | TAAACTTGTCATTTATTTCA+GGG | + | chr1.3:75784883-75784902 | MS.gene71850:intron | 20.0% |
| !!! | TGATTTTTAAATTTTGGTGA+TGG | + | chr1.3:75783937-75783956 | MS.gene71850:intron | 20.0% |
| !!! | TTAAACTTGTCATTTATTTC+AGG | + | chr1.3:75784882-75784901 | MS.gene71850:intron | 20.0% |
| !!! | TTTCTGAAATGTTAACTATA+GGG | + | chr1.3:75785178-75785197 | MS.gene71850:intron | 20.0% |
| !!! | TTTTCTGAAATGTTAACTAT+AGG | + | chr1.3:75785177-75785196 | MS.gene71850:intron | 20.0% |
| ! | AAACCTGAATTATACTCATT+TGG | - | chr1.3:75784620-75784639 | None:intergenic | 25.0% |
| ! | AAGTGTATAGATTCTTCAAA+AGG | - | chr1.3:75785844-75785863 | None:intergenic | 25.0% |
| ! | ACACTAATTAGAGAAAAAGT+TGG | + | chr1.3:75786564-75786583 | MS.gene71850:intron | 25.0% |
| ! | ACATCTAGAAACCATAAAAT+GGG | + | chr1.3:75785904-75785923 | MS.gene71850:intron | 25.0% |
| ! | ATATGGTTCTTATCAAAAAC+TGG | - | chr1.3:75786909-75786928 | None:intergenic | 25.0% |
| ! | ATCATAGATCTATCATACAA+AGG | + | chr1.3:75786301-75786320 | MS.gene71850:intron | 25.0% |
| ! | CAATAGTAACATTAATGTTG+CGG | + | chr1.3:75784396-75784415 | MS.gene71850:CDS | 25.0% |
| ! | CACTAATTAGAGAAAAAGTT+GGG | + | chr1.3:75786565-75786584 | MS.gene71850:intron | 25.0% |
| ! | TACATCTAGAAACCATAAAA+TGG | + | chr1.3:75785903-75785922 | MS.gene71850:intron | 25.0% |
| ! | TATGGTTCTTATCAAAAACT+GGG | - | chr1.3:75786908-75786927 | None:intergenic | 25.0% |
| ! | TGCATTTGAATAGGATAAAA+AGG | - | chr1.3:75786679-75786698 | None:intergenic | 25.0% |
| !! | AAACTTGTCATTTATTTCAG+GGG | + | chr1.3:75784884-75784903 | MS.gene71850:intron | 25.0% |
| !! | AAATTTGAAATCTAGCAAAC+TGG | - | chr1.3:75786025-75786044 | None:intergenic | 25.0% |
| !! | CAAAACAAATTTTATCAGAG+AGG | + | chr1.3:75786236-75786255 | MS.gene71850:intron | 25.0% |
| !! | GATGTTGAATTTTTCTTTTC+AGG | + | chr1.3:75784261-75784280 | MS.gene71850:intron | 25.0% |
| !! | TTTTATTCTTTATGGTTGAG+TGG | - | chr1.3:75786403-75786422 | None:intergenic | 25.0% |
| !!! | ATTGCTTTTATAGTCACAAT+GGG | + | chr1.3:75785961-75785980 | MS.gene71850:intron | 25.0% |
| !!! | GCAATGGATTTTATTCTTTA+TGG | - | chr1.3:75786411-75786430 | None:intergenic | 25.0% |
| !!! | TAGATGTATTATTTGGCTTT+TGG | + | chr1.3:75786829-75786848 | MS.gene71850:intron | 25.0% |
| !!! | TATTGCTTTTATAGTCACAA+TGG | + | chr1.3:75785960-75785979 | MS.gene71850:intron | 25.0% |
| !!! | TCATTTTTTCAAATTACCTC+CGG | + | chr1.3:75784106-75784125 | MS.gene71850:intron | 25.0% |
| AAACAGGCACAATTAATATC+CGG | - | chr1.3:75784694-75784713 | None:intergenic | 30.0% | |
| AACCGAAAATTCGGAAAAAA+CGG | + | chr1.3:75786648-75786667 | MS.gene71850:intron | 30.0% | |
| ACATCCAAGATCAAAAGATA+CGG | - | chr1.3:75786076-75786095 | None:intergenic | 30.0% | |
| ATTAGAAATAAGCACTAACC+TGG | - | chr1.3:75784792-75784811 | None:intergenic | 30.0% | |
| CAACCAAATGAGTATAATTC+AGG | + | chr1.3:75784614-75784633 | MS.gene71850:CDS | 30.0% | |
| CAATCACAATCAAAATAGGA+TGG | + | chr1.3:75786347-75786366 | MS.gene71850:intron | 30.0% | |
| CCTATCTCTATAAAGAATAC+AGG | - | chr1.3:75785590-75785609 | None:intergenic | 30.0% | |
| CCTGTATTCTTTATAGAGAT+AGG | + | chr1.3:75785587-75785606 | MS.gene71850:intron | 30.0% | |
| CTTCTGAACATTGAAAACTT+TGG | - | chr1.3:75785487-75785506 | None:intergenic | 30.0% | |
| GAGAATATTGTGATCATGAT+TGG | + | chr1.3:75786515-75786534 | MS.gene71850:intron | 30.0% | |
| TACTGGACATATCCAATAAA+CGG | + | chr1.3:75786105-75786124 | MS.gene71850:intron | 30.0% | |
| TCAATCGAACTATCCAAATA+AGG | - | chr1.3:75785624-75785643 | None:intergenic | 30.0% | |
| TGATCACAATATTCTCATCT+AGG | - | chr1.3:75786511-75786530 | None:intergenic | 30.0% | |
| TGCATCTTAATATACCACAT+AGG | + | chr1.3:75785660-75785679 | MS.gene71850:intron | 30.0% | |
| TGTCATCATCTATAAAGCAT+TGG | - | chr1.3:75784164-75784183 | None:intergenic | 30.0% | |
| TTGAGAAAAATGTACTCATG+TGG | - | chr1.3:75785244-75785263 | None:intergenic | 30.0% | |
| TTGGATGTTGAAATACTTAC+TGG | + | chr1.3:75786088-75786107 | MS.gene71850:intron | 30.0% | |
| TTTATAGAGATAGGTTTCAC+AGG | + | chr1.3:75785596-75785615 | MS.gene71850:intron | 30.0% | |
| ! | AACTTGTCATTTATTTCAGG+GGG | + | chr1.3:75784885-75784904 | MS.gene71850:intron | 30.0% |
| ! | ACATGAGTACATTTTTCTCA+AGG | + | chr1.3:75785243-75785262 | MS.gene71850:intron | 30.0% |
| ! | ATTGAAAACTTTGGTTCATC+AGG | - | chr1.3:75785478-75785497 | None:intergenic | 30.0% |
| ! | CAAAGTTTTCAATGTTCAGA+AGG | + | chr1.3:75785485-75785504 | MS.gene71850:intron | 30.0% |
| ! | CATGAGTACATTTTTCTCAA+GGG | + | chr1.3:75785244-75785263 | MS.gene71850:intron | 30.0% |
| ! | CTATTTCTTTACTATGGCTT+AGG | - | chr1.3:75786205-75786224 | None:intergenic | 30.0% |
| ! | GGTTTGTTTATTGTTGTTGT+TGG | + | chr1.3:75784635-75784654 | MS.gene71850:intron | 30.0% |
| ! | TATGGTGAATATTTGAGACA+GGG | - | chr1.3:75785373-75785392 | None:intergenic | 30.0% |
| ! | TGTTAGTTTGAGAGATTATC+TGG | + | chr1.3:75784821-75784840 | MS.gene71850:intron | 30.0% |
| ! | TTATGGTGAATATTTGAGAC+AGG | - | chr1.3:75785374-75785393 | None:intergenic | 30.0% |
| ! | TTTCTGCAGAGTTAATTTTC+TGG | + | chr1.3:75785347-75785366 | MS.gene71850:intron | 30.0% |
| ! | TTTTTCCACAACCGAAAATT+CGG | + | chr1.3:75786639-75786658 | MS.gene71850:intron | 30.0% |
| !! | TGATTTTAGAGAATGTCTGA+AGG | - | chr1.3:75787051-75787070 | None:intergenic | 30.0% |
| !! | TGGCTTATTTTCTAGCAATT+TGG | + | chr1.3:75784841-75784860 | MS.gene71850:intron | 30.0% |
| !! | TGTTACTTGAACGTTTTAAC+CGG | + | chr1.3:75784672-75784691 | MS.gene71850:intron | 30.0% |
| !! | TTGAAAATTTAGGTGATGGA+TGG | + | chr1.3:75784193-75784212 | MS.gene71850:intron | 30.0% |
| !! | TTTTGAAGGAAAAGGATTTG+CGG | - | chr1.3:75783099-75783118 | None:intergenic | 30.0% |
| !!! | AGCAATTTGGACCTTTTTTT+GGG | + | chr1.3:75784854-75784873 | MS.gene71850:intron | 30.0% |
| !!! | ATTTTTTTATCACACCTGCA+AGG | + | chr1.3:75785282-75785301 | MS.gene71850:intron | 30.0% |
| !!! | CATTTTTTCAAATTACCTCC+GGG | + | chr1.3:75784107-75784126 | MS.gene71850:intron | 30.0% |
| !!! | TAGCAATTTGGACCTTTTTT+TGG | + | chr1.3:75784853-75784872 | MS.gene71850:intron | 30.0% |
| !!! | TATTTGGCTTTTGGTTAATG+TGG | + | chr1.3:75786838-75786857 | MS.gene71850:intron | 30.0% |
| !!! | TGTTCTTATTTTTATTCCGC+AGG | + | chr1.3:75786938-75786957 | MS.gene71850:intron | 30.0% |
| AACAAATTGCAAGACTCTGT+TGG | + | chr1.3:75785875-75785894 | MS.gene71850:intron | 35.0% | |
| AACTACAAAATGAGCCTATG+TGG | - | chr1.3:75785677-75785696 | None:intergenic | 35.0% | |
| AACTCCAAACATACCCAAAT+TGG | - | chr1.3:75784740-75784759 | None:intergenic | 35.0% | |
| AACTTTCACGCTTTCCAATT+TGG | + | chr1.3:75784723-75784742 | MS.gene71850:CDS | 35.0% | |
| AATGTCCTAAATGACTCTAC+TGG | - | chr1.3:75786598-75786617 | None:intergenic | 35.0% | |
| ACAAAGGAACATAGAGATAG+AGG | + | chr1.3:75786317-75786336 | MS.gene71850:intron | 35.0% | |
| ACTTTCACGCTTTCCAATTT+GGG | + | chr1.3:75784724-75784743 | MS.gene71850:CDS | 35.0% | |
| AGAGGAATAATGTATGATCC+AGG | - | chr1.3:75785527-75785546 | None:intergenic | 35.0% | |
| ATCTGAACCAGTATTTGACA+TGG | - | chr1.3:75786876-75786895 | None:intergenic | 35.0% | |
| ATTGGCACATACATAGACAT+CGG | - | chr1.3:75784146-75784165 | None:intergenic | 35.0% | |
| CAAAACACTAGAGAAAACTG+TGG | - | chr1.3:75785810-75785829 | None:intergenic | 35.0% | |
| CAAAAGTGGAAAGAACTAGT+TGG | + | chr1.3:75784569-75784588 | MS.gene71850:CDS | 35.0% | |
| CAGAGTGAAAAGTAAAATGC+TGG | + | chr1.3:75784966-75784985 | MS.gene71850:CDS | 35.0% | |
| CATCCAAGATCAAAAGATAC+GGG | - | chr1.3:75786075-75786094 | None:intergenic | 35.0% | |
| CATGATGCAAATGCAATCTA+AGG | - | chr1.3:75785140-75785159 | None:intergenic | 35.0% | |
| CTAGAGAAAACTGTGGTTAT+AGG | - | chr1.3:75785803-75785822 | None:intergenic | 35.0% | |
| CTTTCCAATTTGGGTATGTT+TGG | + | chr1.3:75784733-75784752 | MS.gene71850:CDS | 35.0% | |
| GAGAGGTGAACATTTAATAC+AGG | + | chr1.3:75786253-75786272 | MS.gene71850:intron | 35.0% | |
| GTGAAACTGTGCATTTGAAT+AGG | - | chr1.3:75786688-75786707 | None:intergenic | 35.0% | |
| GTTTAACACCTCCCAAAAAA+AGG | - | chr1.3:75784868-75784887 | None:intergenic | 35.0% | |
| GTTTCAGCAAGTAAACCAAT+TGG | - | chr1.3:75783343-75783362 | None:intergenic | 35.0% | |
| TACCCTTATATTTCAGAGTG+AGG | - | chr1.3:75786756-75786775 | None:intergenic | 35.0% | |
| TATTATATGCATGGACGCAT+AGG | + | chr1.3:75785776-75785795 | MS.gene71850:intron | 35.0% | |
| TCCGCAGGATCAAATTAATT+GGG | + | chr1.3:75786953-75786972 | MS.gene71850:intron | 35.0% | |
| TCTTGATGCTTTCTATGAGA+AGG | + | chr1.3:75783858-75783877 | MS.gene71850:CDS | 35.0% | |
| TGAATCTGATAAGGCTGATA+TGG | + | chr1.3:75783243-75783262 | MS.gene71850:CDS | 35.0% | |
| TGCTGTTGCTAAGAATATGA+TGG | + | chr1.3:75783783-75783802 | MS.gene71850:CDS | 35.0% | |
| TGTATCTGTTGTCTCAAAAG+TGG | + | chr1.3:75784555-75784574 | MS.gene71850:CDS | 35.0% | |
| TGTGTATGCAACTGAATGTT+TGG | + | chr1.3:75786453-75786472 | MS.gene71850:intron | 35.0% | |
| TGTTCGTTTATGTTCTCACT+CGG | - | chr1.3:75785059-75785078 | None:intergenic | 35.0% | |
| TTCCGCAGGATCAAATTAAT+TGG | + | chr1.3:75786952-75786971 | MS.gene71850:intron | 35.0% | |
| TTGACATTGCATCAGTCAAT+GGG | + | chr1.3:75783578-75783597 | MS.gene71850:CDS | 35.0% | |
| TTTAGAGAATGTCTGAAGGA+AGG | - | chr1.3:75787047-75787066 | None:intergenic | 35.0% | |
| TTTGAAGGAAAAGGATTTGC+GGG | - | chr1.3:75783098-75783117 | None:intergenic | 35.0% | |
| ! | ACCCAATTAATTTGATCCTG+CGG | - | chr1.3:75786957-75786976 | None:intergenic | 35.0% |
| ! | ATAGTTCGATTGATTCCTAG+TGG | + | chr1.3:75785631-75785650 | MS.gene71850:intron | 35.0% |
| ! | CGTTGTTGTTGAATCTGATA+AGG | + | chr1.3:75783234-75783253 | MS.gene71850:CDS | 35.0% |
| ! | TATTGTTGTTGTTGGCTATC+TGG | + | chr1.3:75784643-75784662 | MS.gene71850:intron | 35.0% |
| ! | TTGCAGACATTCCCATTTTA+TGG | - | chr1.3:75785918-75785937 | None:intergenic | 35.0% |
| ! | TTTTTCCGAATTTTCGGTTG+TGG | - | chr1.3:75786647-75786666 | None:intergenic | 35.0% |
| !! | AAATTTAGGTGATGGATGGA+TGG | + | chr1.3:75784197-75784216 | MS.gene71850:intron | 35.0% |
| !! | AGCTTGGATTTTGAAGGAAA+AGG | - | chr1.3:75783107-75783126 | None:intergenic | 35.0% |
| !! | ATGCCTCACTCTGAAATATA+AGG | + | chr1.3:75786750-75786769 | MS.gene71850:intron | 35.0% |
| !! | GATCTTAGCTTGGATTTTGA+AGG | - | chr1.3:75783113-75783132 | None:intergenic | 35.0% |
| !! | TGCCTCACTCTGAAATATAA+GGG | + | chr1.3:75786751-75786770 | MS.gene71850:intron | 35.0% |
| !! | TTAGGTTGAAATTGTCTCAC+AGG | - | chr1.3:75786187-75786206 | None:intergenic | 35.0% |
| !!! | AATTTGGACCTTTTTTTGGG+AGG | + | chr1.3:75784857-75784876 | MS.gene71850:intron | 35.0% |
| !!! | CACCGTTTTTTCCGAATTTT+CGG | - | chr1.3:75786653-75786672 | None:intergenic | 35.0% |
| !!! | TCTTTTCAGGTGAAACCTAA+GGG | + | chr1.3:75784274-75784293 | MS.gene71850:intron | 35.0% |
| !!! | TTCTTTTCAGGTGAAACCTA+AGG | + | chr1.3:75784273-75784292 | MS.gene71850:intron | 35.0% |
| AAAGCAACATTACTCGAACC+CGG | - | chr1.3:75783748-75783767 | None:intergenic | 40.0% | |
| AAAGTTCTTGCCATCTTTGC+AGG | - | chr1.3:75784371-75784390 | None:intergenic | 40.0% | |
| AAATTGCAAGACTCTGTTGG+AGG | + | chr1.3:75785878-75785897 | MS.gene71850:intron | 40.0% | |
| AACAACGACACTATCACCTT+TGG | - | chr1.3:75783221-75783240 | None:intergenic | 40.0% | |
| AAGGAACATAGAGATAGAGG+AGG | + | chr1.3:75786320-75786339 | MS.gene71850:intron | 40.0% | |
| ACTGTTCTTGCTGATACAGA+TGG | + | chr1.3:75784937-75784956 | MS.gene71850:CDS | 40.0% | |
| AGATTTCACGGATCTTAGCT+TGG | - | chr1.3:75783123-75783142 | None:intergenic | 40.0% | |
| AGTTCTTCAGGATGCTGATA+AGG | + | chr1.3:75784453-75784472 | MS.gene71850:CDS | 40.0% | |
| ATCTGTATCAGCAAGAACAG+TGG | - | chr1.3:75784938-75784957 | None:intergenic | 40.0% | |
| CGAAAATTCGGAAAAAACGG+TGG | + | chr1.3:75786651-75786670 | MS.gene71850:intron | 40.0% | |
| GACGTTGAAACTTTCTACGA+CGG | + | chr1.3:75783265-75783284 | MS.gene71850:CDS | 40.0% | |
| GCATGAATGCATAAACAGCA+AGG | - | chr1.3:75785012-75785031 | None:intergenic | 40.0% | |
| GCTGTTACATTCACCTGAAA+AGG | - | chr1.3:75786989-75787008 | None:intergenic | 40.0% | |
| GGTTTCACAGGAACCTTATT+TGG | + | chr1.3:75785608-75785627 | MS.gene71850:intron | 40.0% | |
| GTATGCAACTGAATGTTTGG+TGG | + | chr1.3:75786456-75786475 | MS.gene71850:intron | 40.0% | |
| GTGGAAAGAACTAGTTGGAA+AGG | + | chr1.3:75784574-75784593 | MS.gene71850:CDS | 40.0% | |
| GTTCATCAGGTAAGAAGAGA+AGG | - | chr1.3:75785465-75785484 | None:intergenic | 40.0% | |
| GTTCGTTTATGTTCTCACTC+GGG | - | chr1.3:75785058-75785077 | None:intergenic | 40.0% | |
| GTTGACATTGCATCAGTCAA+TGG | + | chr1.3:75783577-75783596 | MS.gene71850:CDS | 40.0% | |
| TAAGGTTCTACCTCATACGA+TGG | - | chr1.3:75785122-75785141 | None:intergenic | 40.0% | |
| TCCAATCGTTTACTGTGTCA+AGG | - | chr1.3:75785723-75785742 | None:intergenic | 40.0% | |
| TCCTGAACATTACTGAAGCA+CGG | - | chr1.3:75785310-75785329 | None:intergenic | 40.0% | |
| TCCTTGACACAGTAAACGAT+TGG | + | chr1.3:75785719-75785738 | MS.gene71850:intron | 40.0% | |
| TCTGTATCAGCAAGAACAGT+GGG | - | chr1.3:75784937-75784956 | None:intergenic | 40.0% | |
| TGATAACTGGATACCCAACA+CGG | - | chr1.3:75783831-75783850 | None:intergenic | 40.0% | |
| TGTGATATTCTTGGGACCAT+CGG | - | chr1.3:75783518-75783537 | None:intergenic | 40.0% | |
| TGTGCTACGATACCGTTTAT+TGG | - | chr1.3:75786120-75786139 | None:intergenic | 40.0% | |
| TTATCAGCATCCTGAAGAAC+TGG | - | chr1.3:75784454-75784473 | None:intergenic | 40.0% | |
| TTCGTTTATGTTCTCACTCG+GGG | - | chr1.3:75785057-75785076 | None:intergenic | 40.0% | |
| TTGAAGGAAAAGGATTTGCG+GGG | - | chr1.3:75783097-75783116 | None:intergenic | 40.0% | |
| TTGGTTACACGAGGCAAAAT+AGG | + | chr1.3:75786534-75786553 | MS.gene71850:intron | 40.0% | |
| TTTATTTCAGGGGGCTATCA+TGG | + | chr1.3:75784894-75784913 | MS.gene71850:intron | 40.0% | |
| ! | AGAAGAAGAAGCGGATTTGA+CGG | - | chr1.3:75783404-75783423 | None:intergenic | 40.0% |
| ! | CTTCTAATTTGAGGCGTGTT+TGG | + | chr1.3:75784046-75784065 | MS.gene71850:intron | 40.0% |
| ! | CTTGATAACTCCAGTTCTTC+AGG | + | chr1.3:75784441-75784460 | MS.gene71850:CDS | 40.0% |
| ! | GGGTCTAAACTTTCCTTTTC+AGG | + | chr1.3:75786973-75786992 | MS.gene71850:intron | 40.0% |
| ! | GTTTGTTGCTGTGTTGTAGT+TGG | + | chr1.3:75784529-75784548 | MS.gene71850:intron | 40.0% |
| ! | TGATCATGATTGGTTACACG+AGG | + | chr1.3:75786525-75786544 | MS.gene71850:intron | 40.0% |
| ! | TGTCCCGTATCTTTTGATCT+TGG | + | chr1.3:75786069-75786088 | MS.gene71850:intron | 40.0% |
| !! | AGAAGCACCATGTCAAATAC+TGG | + | chr1.3:75786866-75786885 | MS.gene71850:intron | 40.0% |
| !! | GCCTCAAATTAGAAGTGTCA+GGG | - | chr1.3:75784041-75784060 | None:intergenic | 40.0% |
| !! | TCAAGAGCATCAGTGATAAC+TGG | - | chr1.3:75783844-75783863 | None:intergenic | 40.0% |
| !! | TGTGACGATGACTGCTATTT+TGG | + | chr1.3:75784297-75784316 | MS.gene71850:CDS | 40.0% |
| AAATAAGCACTAACCTGGCC+TGG | - | chr1.3:75784787-75784806 | None:intergenic | 45.0% | |
| AGCCTCCAGTAGAGTCATTT+AGG | + | chr1.3:75786590-75786609 | MS.gene71850:intron | 45.0% | |
| ATTGCATCAGTCAATGGGAC+TGG | + | chr1.3:75783583-75783602 | MS.gene71850:CDS | 45.0% | |
| CAGAAGGCTTCTTTCGTAAC+TGG | + | chr1.3:75785501-75785520 | MS.gene71850:intron | 45.0% | |
| CATTAATGTTGCGGTTGCTG+TGG | + | chr1.3:75784405-75784424 | MS.gene71850:CDS | 45.0% | |
| CTGTTCCTACTTTCCGTGTT+GGG | + | chr1.3:75783815-75783834 | MS.gene71850:CDS | 45.0% | |
| GAAGCTTGCAAAGCAGCATA+AGG | + | chr1.3:75783555-75783574 | MS.gene71850:CDS | 45.0% | |
| GCAGTAGAAGAACCACCTTT+AGG | - | chr1.3:75783709-75783728 | None:intergenic | 45.0% | |
| GCCCTGACACTTCTAATTTG+AGG | + | chr1.3:75784037-75784056 | MS.gene71850:intron | 45.0% | |
| GGAAGAGGAAGAAGAAGAAG+CGG | - | chr1.3:75783413-75783432 | None:intergenic | 45.0% | |
| GGAGCTACATTACTCATCAC+CGG | - | chr1.3:75783661-75783680 | None:intergenic | 45.0% | |
| GGTGATGAGTAATGTAGCTC+CGG | + | chr1.3:75783660-75783679 | MS.gene71850:CDS | 45.0% | |
| GTCCTAAATGACTCTACTGG+AGG | - | chr1.3:75786595-75786614 | None:intergenic | 45.0% | |
| GTCTCTTGGATCAAATCCGA+AGG | + | chr1.3:75783184-75783203 | MS.gene71850:CDS | 45.0% | |
| GTGCAGGCATGAAGATTTCA+CGG | - | chr1.3:75783135-75783154 | None:intergenic | 45.0% | |
| GTTAATGCCACCTGCAAAGA+TGG | + | chr1.3:75784358-75784377 | MS.gene71850:CDS | 45.0% | |
| TAAGATGCACCTTAGCCACT+AGG | - | chr1.3:75785649-75785668 | None:intergenic | 45.0% | |
| TCCGTTTGGTAGGATTACTC+CGG | + | chr1.3:75783606-75783625 | MS.gene71850:CDS | 45.0% | |
| TCTGTTCCTACTTTCCGTGT+TGG | + | chr1.3:75783814-75783833 | MS.gene71850:CDS | 45.0% | |
| TTGCAGGTGGCATTAACAAC+TGG | - | chr1.3:75784355-75784374 | None:intergenic | 45.0% | |
| TTTGATGCCATACTTCCACC+AGG | + | chr1.3:75784766-75784785 | MS.gene71850:CDS | 45.0% | |
| TTTGCAAGCTTCTTCGCTTG+AGG | - | chr1.3:75783547-75783566 | None:intergenic | 45.0% | |
| ! | AAACCAATTGGAGCACCAAC+CGG | - | chr1.3:75783331-75783350 | None:intergenic | 45.0% |
| ! | CCAAGAGACGATTTTACCCT+CGG | - | chr1.3:75783173-75783192 | None:intergenic | 45.0% |
| ! | CGATTGATTCCTAGTGGCTA+AGG | + | chr1.3:75785637-75785656 | MS.gene71850:intron | 45.0% |
| ! | GATTTTACCCTCGGTCATAG+TGG | - | chr1.3:75783164-75783183 | None:intergenic | 45.0% |
| !! | AGGTGTCGCTGTGATATTCT+TGG | - | chr1.3:75783527-75783546 | None:intergenic | 45.0% |
| !! | CGCCTCAAATTAGAAGTGTC+AGG | - | chr1.3:75784042-75784061 | None:intergenic | 45.0% |
| !! | GGATTTGACGGATTTAGCCT+GGG | - | chr1.3:75783392-75783411 | None:intergenic | 45.0% |
| !! | GGTGTCGCTGTGATATTCTT+GGG | - | chr1.3:75783526-75783545 | None:intergenic | 45.0% |
| !!! | GATGACTGCTATTTTGGCGA+AGG | + | chr1.3:75784303-75784322 | MS.gene71850:CDS | 45.0% |
| AAGGAAAAGGATTTGCGGGG+AGG | - | chr1.3:75783094-75783113 | None:intergenic | 50.0% | |
| AATTGTGCCTGTTTGCCTGC+AGG | + | chr1.3:75784700-75784719 | MS.gene71850:intron | 50.0% | |
| ACTCAGTTCCACTATGACCG+AGG | + | chr1.3:75783153-75783172 | MS.gene71850:CDS | 50.0% | |
| AGAAGAACCACCTTTAGGCG+CGG | - | chr1.3:75783704-75783723 | None:intergenic | 50.0% | |
| AGGAAAAGGATTTGCGGGGA+GGG | - | chr1.3:75783093-75783112 | None:intergenic | 50.0% | |
| AGGAGGAGAGTGGTGAATTG+AGG | - | chr1.3:75783055-75783074 | None:intergenic | 50.0% | |
| CCGAGGGTAAAATCGTCTCT+TGG | + | chr1.3:75783170-75783189 | MS.gene71850:CDS | 50.0% | |
| CTCAGTTCCACTATGACCGA+GGG | + | chr1.3:75783154-75783173 | MS.gene71850:CDS | 50.0% | |
| GAAAGTTCCTGCAGGCAAAC+AGG | - | chr1.3:75784710-75784729 | None:intergenic | 50.0% | |
| GAGGAGAGTGGTGAATTGAG+GGG | - | chr1.3:75783053-75783072 | None:intergenic | 50.0% | |
| GATGAGTAATGTAGCTCCGG+TGG | + | chr1.3:75783663-75783682 | MS.gene71850:CDS | 50.0% | |
| GCCGGAGTAATCCTACCAAA+CGG | - | chr1.3:75783610-75783629 | None:intergenic | 50.0% | |
| GCCGTGCTTCAGTAATGTTC+AGG | + | chr1.3:75785306-75785325 | MS.gene71850:intron | 50.0% | |
| GCGGTTAAGTCTGTTTCCGA+TGG | + | chr1.3:75783499-75783518 | MS.gene71850:CDS | 50.0% | |
| GGAGACTGAGAAGTTTCCTG+AGG | - | chr1.3:75783454-75783473 | None:intergenic | 50.0% | |
| GGAGGAGAGTGGTGAATTGA+GGG | - | chr1.3:75783054-75783073 | None:intergenic | 50.0% | |
| GGATACCCAACACGGAAAGT+AGG | - | chr1.3:75783823-75783842 | None:intergenic | 50.0% | |
| GTTCTTGCCATCTTTGCAGG+TGG | - | chr1.3:75784368-75784387 | None:intergenic | 50.0% | |
| GTTTGGTAGGATTACTCCGG+CGG | + | chr1.3:75783609-75783628 | MS.gene71850:CDS | 50.0% | |
| TTTGGCGAAGGCTGTAGCTA+TGG | + | chr1.3:75784315-75784334 | MS.gene71850:CDS | 50.0% | |
| ! | AGTGAGGCATCATGCATGTG+AGG | - | chr1.3:75786740-75786759 | None:intergenic | 50.0% |
| ! | GAAAGCGTGAAAGTTCCTGC+AGG | - | chr1.3:75784718-75784737 | None:intergenic | 50.0% |
| ! | GTCATAGTGGAACTGAGTGC+AGG | - | chr1.3:75783151-75783170 | None:intergenic | 50.0% |
| !! | CGGATTTGACGGATTTAGCC+TGG | - | chr1.3:75783393-75783412 | None:intergenic | 50.0% |
| !! | TTTGGAGAGAGTGTCGCCTT+CGG | - | chr1.3:75783203-75783222 | None:intergenic | 50.0% |
| AACCTGGCCTGGTGGAAGTA+TGG | - | chr1.3:75784776-75784795 | None:intergenic | 55.0% | |
| ATCGGACACACGTCAACACC+CGG | - | chr1.3:75784128-75784147 | None:intergenic | 55.0% | |
| GAAACAGACTTAACCGCCGC+CGG | - | chr1.3:75783496-75783515 | None:intergenic | 55.0% | |
| GAAGGCGACACTCTCTCCAA+AGG | + | chr1.3:75783202-75783221 | MS.gene71850:CDS | 55.0% | |
| GAAGTTTCCTGAGGAGTCGC+CGG | - | chr1.3:75783445-75783464 | None:intergenic | 55.0% | |
| GCAGTCATCGTCACACCCTT+AGG | - | chr1.3:75784292-75784311 | None:intergenic | 55.0% | |
| GCCTTCGTCGACAACGATAG+CGG | - | chr1.3:75783299-75783318 | None:intergenic | 55.0% | |
| GCGGTTGCTGTGGCAATCAA+CGG | + | chr1.3:75784415-75784434 | MS.gene71850:CDS | 55.0% | |
| GGAAAAGGATTTGCGGGGAG+GGG | - | chr1.3:75783092-75783111 | None:intergenic | 55.0% | |
| GGCTTCTTTCGTAACTGGCC+TGG | + | chr1.3:75785506-75785525 | MS.gene71850:intron | 55.0% | |
| GTTGCTGTGGCAATCAACGG+TGG | + | chr1.3:75784418-75784437 | MS.gene71850:CDS | 55.0% | |
| TAAGCACTAACCTGGCCTGG+TGG | - | chr1.3:75784784-75784803 | None:intergenic | 55.0% | |
| TACCTCATACGATGGCCGCA+GGG | - | chr1.3:75785114-75785133 | None:intergenic | 55.0% | |
| TAGGATTACTCCGGCGGATG+TGG | + | chr1.3:75783615-75783634 | MS.gene71850:CDS | 55.0% | |
| TATCGCTGAAGCTCAAGCCC+AGG | + | chr1.3:75783372-75783391 | MS.gene71850:CDS | 55.0% | |
| TTCCTCTTCCTCTCCTCCTC+CGG | + | chr1.3:75783423-75783442 | MS.gene71850:CDS | 55.0% | |
| !! | ATGGGACTGGTCCGTTTGGT+AGG | + | chr1.3:75783596-75783615 | MS.gene71850:CDS | 55.0% |
| !! | GTCAATGGGACTGGTCCGTT+TGG | + | chr1.3:75783592-75783611 | MS.gene71850:CDS | 55.0% |
| AAAGGATTTGCGGGGAGGGG+AGG | - | chr1.3:75783089-75783108 | None:intergenic | 60.0% | |
| ACTGAAGCACGGCACCTTGC+AGG | - | chr1.3:75785299-75785318 | None:intergenic | 60.0% | |
| AGAACCACCTTTAGGCGCGG+TGG | - | chr1.3:75783701-75783720 | None:intergenic | 60.0% | |
| CAGGGGGCTATCATGGCTGT+TGG | + | chr1.3:75784901-75784920 | MS.gene71850:intron | 60.0% | |
| CGACGAAGGCGAAACAGCTC+CGG | + | chr1.3:75783309-75783328 | MS.gene71850:CDS | 60.0% | |
| CTACCTCATACGATGGCCGC+AGG | - | chr1.3:75785115-75785134 | None:intergenic | 60.0% | |
| GAACCACCTTTAGGCGCGGT+GGG | - | chr1.3:75783700-75783719 | None:intergenic | 60.0% | |
| GAAGGCGAAACAGCTCCGGT+TGG | + | chr1.3:75783313-75783332 | MS.gene71850:CDS | 60.0% | |
| GATTACTCCGGCGGATGTGG+AGG | + | chr1.3:75783618-75783637 | MS.gene71850:CDS | 60.0% | |
| GCCGCTATCGTTGTCGACGA+AGG | + | chr1.3:75783295-75783314 | MS.gene71850:CDS | 60.0% | |
| GGCCTTCTGTCATAGCCCTG+CGG | + | chr1.3:75785096-75785115 | MS.gene71850:intron | 60.0% | |
| GGCTGCTGCTGGGATTACAC+CGG | + | chr1.3:75783639-75783658 | MS.gene71850:CDS | 60.0% | |
| TGCCATACTTCCACCAGGCC+AGG | + | chr1.3:75784771-75784790 | MS.gene71850:CDS | 60.0% | |
| TGCTGCACCAGCTGCGATTC+CGG | + | chr1.3:75783726-75783745 | MS.gene71850:CDS | 60.0% | |
| ! | GCTCCGGTTGGTGCTCCAAT+TGG | + | chr1.3:75783325-75783344 | MS.gene71850:CDS | 60.0% |
| ACAGACTTAACCGCCGCCGG+TGG | - | chr1.3:75783493-75783512 | None:intergenic | 65.0% | |
| AGCCCTGCGGCCATCGTATG+AGG | + | chr1.3:75785109-75785128 | MS.gene71850:intron | 65.0% | |
| ATTTGCGGGGAGGGGAGGAG+CGG | - | chr1.3:75783084-75783103 | None:intergenic | 65.0% | |
| CGGATGTGGAGGCTGCTGCT+GGG | + | chr1.3:75783629-75783648 | MS.gene71850:CDS | 65.0% | |
| CTCGAACCCGGAATCGCAGC+TGG | - | chr1.3:75783736-75783755 | None:intergenic | 65.0% | |
| GCTGCACCAGCTGCGATTCC+GGG | + | chr1.3:75783727-75783746 | MS.gene71850:CDS | 65.0% | |
| GGACACACGTCAACACCCGG+AGG | - | chr1.3:75784125-75784144 | None:intergenic | 65.0% | |
| GGCCGCAGGGCTATGACAGA+AGG | - | chr1.3:75785101-75785120 | None:intergenic | 65.0% | |
| GTTTCCTGAGGAGTCGCCGG+AGG | - | chr1.3:75783442-75783461 | None:intergenic | 65.0% | |
| AGGAGTCGCCGGAGGAGGAG+AGG | - | chr1.3:75783434-75783453 | None:intergenic | 70.0% | |
| CCTGCTCCCACCGCGCCTAA+AGG | + | chr1.3:75783691-75783710 | MS.gene71850:CDS | 70.0% | |
| CCTTTAGGCGCGGTGGGAGC+AGG | - | chr1.3:75783694-75783713 | None:intergenic | 70.0% | |
| CGCCGGAGGAGGAGAGGAAG+AGG | - | chr1.3:75783428-75783447 | None:intergenic | 70.0% | |
| GACTTAACCGCCGCCGGTGG+AGG | - | chr1.3:75783490-75783509 | None:intergenic | 70.0% | |
| GCAGCAGCCTCCACATCCGC+CGG | - | chr1.3:75783628-75783647 | None:intergenic | 70.0% | |
| GCGGATGTGGAGGCTGCTGC+TGG | + | chr1.3:75783628-75783647 | MS.gene71850:CDS | 70.0% | |
| GCGGTGAGGGAGGAGGAGAG+TGG | - | chr1.3:75783065-75783084 | None:intergenic | 70.0% | |
| GCTCCCACCGCGCCTAAAGG+TGG | + | chr1.3:75783694-75783713 | MS.gene71850:CDS | 70.0% | |
| GTGGGAGCAGGAGTCGCCAC+CGG | - | chr1.3:75783682-75783701 | None:intergenic | 70.0% | |
| TCCTCCACCACCGCCTCCAC+CGG | + | chr1.3:75783474-75783493 | MS.gene71850:CDS | 70.0% | |
| TCCTCCTCCGGCGACTCCTC+AGG | + | chr1.3:75783435-75783454 | MS.gene71850:CDS | 70.0% | |
| TCCTGAGGAGTCGCCGGAGG+AGG | - | chr1.3:75783439-75783458 | None:intergenic | 70.0% | |
| TTAACCGCCGCCGGTGGAGG+CGG | - | chr1.3:75783487-75783506 | None:intergenic | 70.0% | |
| GAGGGGAGGAGCGGTGAGGG+AGG | - | chr1.3:75783075-75783094 | None:intergenic | 75.0% | |
| GGGAGGAGCGGTGAGGGAGG+AGG | - | chr1.3:75783072-75783091 | None:intergenic | 75.0% | |
| GGGGAGGGGAGGAGCGGTGA+GGG | - | chr1.3:75783078-75783097 | None:intergenic | 75.0% | |
| TCCACCACCGCCTCCACCGG+CGG | + | chr1.3:75783477-75783496 | MS.gene71850:CDS | 75.0% | |
| !! | GGTGGAGGCGGTGGTGGAGG+AGG | - | chr1.3:75783475-75783494 | None:intergenic | 75.0% |
| ! | ACCACCGCCTCCACCGGCGG+CGG | + | chr1.3:75783480-75783499 | MS.gene71850:CDS | 80.0% |
| ! | CGGGGAGGGGAGGAGCGGTG+AGG | - | chr1.3:75783079-75783098 | None:intergenic | 80.0% |
| !! | GCCGGTGGAGGCGGTGGTGG+AGG | - | chr1.3:75783478-75783497 | None:intergenic | 80.0% |
| ! | ACCGCCGCCGGTGGAGGCGG+TGG | - | chr1.3:75783484-75783503 | None:intergenic | 85.0% |
| ! | GCCGCCGGTGGAGGCGGTGG+TGG | - | chr1.3:75783481-75783500 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 75783025 | 75787099 | 75783025 | ID=MS.gene71850 |
| chr1.3 | mRNA | 75783025 | 75787099 | 75783025 | ID=MS.gene71850.t1;Parent=MS.gene71850 |
| chr1.3 | exon | 75783025 | 75783879 | 75783025 | ID=MS.gene71850.t1.exon1;Parent=MS.gene71850.t1 |
| chr1.3 | CDS | 75783025 | 75783879 | 75783025 | ID=cds.MS.gene71850.t1;Parent=MS.gene71850.t1 |
| chr1.3 | exon | 75784283 | 75784474 | 75784283 | ID=MS.gene71850.t1.exon2;Parent=MS.gene71850.t1 |
| chr1.3 | CDS | 75784283 | 75784474 | 75784283 | ID=cds.MS.gene71850.t1;Parent=MS.gene71850.t1 |
| chr1.3 | exon | 75784548 | 75784635 | 75784548 | ID=MS.gene71850.t1.exon3;Parent=MS.gene71850.t1 |
| chr1.3 | CDS | 75784548 | 75784635 | 75784548 | ID=cds.MS.gene71850.t1;Parent=MS.gene71850.t1 |
| chr1.3 | exon | 75784722 | 75784792 | 75784722 | ID=MS.gene71850.t1.exon4;Parent=MS.gene71850.t1 |
| chr1.3 | CDS | 75784722 | 75784792 | 75784722 | ID=cds.MS.gene71850.t1;Parent=MS.gene71850.t1 |
| chr1.3 | exon | 75784904 | 75784987 | 75784904 | ID=MS.gene71850.t1.exon5;Parent=MS.gene71850.t1 |
| chr1.3 | CDS | 75784904 | 75784987 | 75784904 | ID=cds.MS.gene71850.t1;Parent=MS.gene71850.t1 |
| chr1.3 | exon | 75786995 | 75787099 | 75786995 | ID=MS.gene71850.t1.exon6;Parent=MS.gene71850.t1 |
| chr1.3 | CDS | 75786995 | 75787099 | 75786995 | ID=cds.MS.gene71850.t1;Parent=MS.gene71850.t1 |
| Gene Sequence |
| Protein sequence |
