Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72132.t1 | XP_013447041.1 | 98.9 | 536 | 6 | 0 | 1 | 536 | 1 | 536 | 0.00E+00 | 1085.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72132.t1 | O66601 | 53.2 | 524 | 226 | 8 | 13 | 536 | 6 | 510 | 1.3e-152 | 541.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72132.t1 | A0A072TW15 | 98.9 | 536 | 6 | 0 | 1 | 536 | 1 | 536 | 0.0e+00 | 1085.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023974 | MS.gene72132 | PPI |
| MS.gene72132 | MS.gene058668 | PPI |
| MS.gene035805 | MS.gene72132 | PPI |
| MS.gene85452 | MS.gene72132 | PPI |
| MS.gene72132 | MS.gene064542 | PPI |
| MS.gene72132 | MS.gene36640 | PPI |
| MS.gene72132 | MS.gene73119 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72132.t1 | MTR_8g098325 | 98.881 | 536 | 6 | 0 | 1 | 536 | 1 | 536 | 0.0 | 1095 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72132.t1 | AT1G63660 | 79.962 | 529 | 106 | 0 | 8 | 536 | 6 | 534 | 0.0 | 898 |
| MS.gene72132.t1 | AT1G63660 | 77.156 | 429 | 98 | 0 | 8 | 436 | 6 | 434 | 0.0 | 706 |
Find 156 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTCTTACAAAGCTTAA+AGG | 0.212229 | 4.2:-6445181 | MS.gene72132:CDS |
| TGTATAAAGGTACGTCAATT+AGG | 0.224273 | 4.2:-6444772 | MS.gene72132:intron |
| TGGTCTTGCAGTTAGAGTTC+TGG | 0.234935 | 4.2:-6444695 | MS.gene72132:CDS |
| TCCCCGACGGCTTTCTTCAA+TGG | 0.264395 | 4.2:-6446162 | MS.gene72132:CDS |
| CTTTAAGCTTTGTAAGAAAT+TGG | 0.278879 | 4.2:+6445182 | None:intergenic |
| CAGACCTTCTTACTTGGTTC+AGG | 0.287543 | 4.2:-6445062 | MS.gene72132:CDS |
| CATGTCATTTGTGCCTTATC+TGG | 0.306235 | 4.2:-6445470 | MS.gene72132:CDS |
| GAAGCTGTTACTCTTCCTTC+TGG | 0.306647 | 4.2:-6445944 | MS.gene72132:CDS |
| CCCCGACGGCTTTCTTCAAT+GGG | 0.310713 | 4.2:-6446161 | MS.gene72132:CDS |
| CTGGCCTTTATGACGTAATA+TGG | 0.320042 | 4.2:-6444509 | MS.gene72132:CDS |
| TTGGACATAATCAGATTGTT+TGG | 0.324863 | 4.2:-6445982 | MS.gene72132:CDS |
| TTGCTGTGTCTATAGGTATA+AGG | 0.328120 | 4.2:-6445275 | MS.gene72132:intron |
| GCCAATGGCTTTATGAACTA+TGG | 0.344313 | 4.2:+6445421 | None:intergenic |
| ATACTGAAGACCATAAAATT+TGG | 0.353194 | 4.2:+6445862 | None:intergenic |
| GAAGTAAAGAGGAAAATTAT+TGG | 0.356749 | 4.2:-6445145 | MS.gene72132:CDS |
| GGTCTTGCAGTTAGAGTTCT+GGG | 0.357052 | 4.2:-6444694 | MS.gene72132:CDS |
| GTATGGCCGGATGGAAATTA+AGG | 0.366637 | 4.2:-6446041 | MS.gene72132:CDS |
| GTCGGGGAAGGAAGGGGAAT+CGG | 0.371614 | 4.2:+6446177 | None:intergenic |
| AGTTTCAATTTCATATCCTT+TGG | 0.386250 | 4.2:+6444941 | None:intergenic |
| GTTGGAAACACGCAGGAGTA+TGG | 0.395537 | 4.2:-6446058 | MS.gene72132:CDS |
| TCCAATGCAGTTCCTGTTCT+CGG | 0.396120 | 4.2:-6446133 | MS.gene72132:CDS |
| GAGAGAAAACGGAGAGGCTT+CGG | 0.409425 | 4.2:+6446293 | None:intergenic |
| GGCTCTTGATGGTATGGGAA+TGG | 0.412411 | 4.2:+6444984 | None:intergenic |
| GACATTATGATGGCTCTTGA+TGG | 0.415267 | 4.2:+6444973 | None:intergenic |
| TACCTGTCGGAGAACATCTA+AGG | 0.416589 | 4.2:+6444651 | None:intergenic |
| GCTCTTGATGGTATGGGAAT+GGG | 0.417699 | 4.2:+6444985 | None:intergenic |
| TCGGGGAAGGAAGGGGAATC+GGG | 0.419706 | 4.2:+6446178 | None:intergenic |
| TTCTTACCAGTAAGATCTGT+TGG | 0.422935 | 4.2:-6444471 | MS.gene72132:CDS |
| TGAACTCCAACAGATCTTAC+TGG | 0.423500 | 4.2:+6444465 | None:intergenic |
| GTAAGATCTGTTGGAGTTCA+AGG | 0.429733 | 4.2:-6444462 | MS.gene72132:CDS |
| GCACAAATGACATGCTCATC+AGG | 0.431096 | 4.2:+6445479 | None:intergenic |
| GGGCATGATTCAATCACATC+AGG | 0.436861 | 4.2:+6445028 | None:intergenic |
| GTATAAAGGTACGTCAATTA+GGG | 0.444870 | 4.2:-6444771 | MS.gene72132:intron |
| GTGGAAGATGGAGGATGTGT+TGG | 0.444993 | 4.2:-6445537 | MS.gene72132:CDS |
| CGTCATCCCTTCCCTGGGCC+TGG | 0.447113 | 4.2:-6444715 | MS.gene72132:CDS |
| TGGAAGCAGACCTTCTTACT+TGG | 0.447736 | 4.2:-6445068 | MS.gene72132:CDS |
| GATGTTTGTGGGATTTCAGC+AGG | 0.450199 | 4.2:-6445560 | MS.gene72132:CDS |
| GACTCATACGCCGGAGGGAA+TGG | 0.454303 | 4.2:-6445606 | MS.gene72132:CDS |
| CAAAAGCTAGAAAAGGAACT+TGG | 0.456695 | 4.2:-6445088 | MS.gene72132:CDS |
| CTAAAACGTCATCCCTTCCC+TGG | 0.460144 | 4.2:-6444721 | MS.gene72132:CDS |
| TCCTTCTGGTTTCAATGTCG+TGG | 0.462035 | 4.2:-6445930 | MS.gene72132:CDS |
| CCCTCCCTCGTCATTCTCTC+CGG | 0.466714 | 4.2:-6446223 | MS.gene72132:CDS |
| TATGATGGCTCTTGATGGTA+TGG | 0.468360 | 4.2:+6444978 | None:intergenic |
| CGAAGTCGAGGATGAGAACT+AGG | 0.468903 | 4.2:+6446350 | None:intergenic |
| TCCTTGAAAAGTAGTTTAAG+TGG | 0.473279 | 4.2:+6444911 | None:intergenic |
| AATCGGGAGTGTGAACGGAG+TGG | 0.473517 | 4.2:+6446194 | None:intergenic |
| TTGTTGACAATGGCTTGCTC+AGG | 0.477269 | 4.2:-6445379 | MS.gene72132:intron |
| ATCGGGAGTGTGAACGGAGT+GGG | 0.478020 | 4.2:+6446195 | None:intergenic |
| AGACCTTCTTACTTGGTTCA+GGG | 0.478848 | 4.2:-6445061 | MS.gene72132:CDS |
| CTTGCCATATTACGTCATAA+AGG | 0.478901 | 4.2:+6444505 | None:intergenic |
| TTATGTCCAACTTTCTCAGC+AGG | 0.480136 | 4.2:+6445995 | None:intergenic |
| GCAGCATCAACACACTCAAC+TGG | 0.486387 | 4.2:+6445208 | None:intergenic |
| TTCAGTGTTTCCATTCCCTC+CGG | 0.487027 | 4.2:+6445596 | None:intergenic |
| CAGCTTCTTGTTAGCCGTCT+CGG | 0.488371 | 4.2:-6446094 | MS.gene72132:CDS |
| TGTGATGGAAACCTTTAAAA+CGG | 0.496167 | 4.2:-6445242 | MS.gene72132:CDS |
| AAACGGAGAGGCTTCGGATA+CGG | 0.496736 | 4.2:+6446299 | None:intergenic |
| CCGTAGCAGATACCGAGAAC+AGG | 0.498393 | 4.2:+6446121 | None:intergenic |
| TTTGGACCTTAATTTCCATC+CGG | 0.502860 | 4.2:+6446035 | None:intergenic |
| GCCCATTGAAGAAAGCCGTC+GGG | 0.506662 | 4.2:+6446160 | None:intergenic |
| GAAAGCCGTCGGGGAAGGAA+GGG | 0.507848 | 4.2:+6446170 | None:intergenic |
| GATTTCAGCAGGGTGGAAGA+TGG | 0.508686 | 4.2:-6445549 | MS.gene72132:CDS |
| GTTGAGGCAGAGAGAGAAAA+CGG | 0.509193 | 4.2:+6446282 | None:intergenic |
| TGTCTATAGGTATAAGGAGC+AGG | 0.509880 | 4.2:-6445269 | MS.gene72132:intron |
| GGAATCAACACCACCAGATA+AGG | 0.510348 | 4.2:+6445457 | None:intergenic |
| GAAGATGGAGGATGTGTTGG+AGG | 0.511074 | 4.2:-6445534 | MS.gene72132:CDS |
| GAAGACCACCGACATTATGA+TGG | 0.513566 | 4.2:+6444963 | None:intergenic |
| TCATGCCCACCACCTGGAAG+TGG | 0.514563 | 4.2:-6445013 | MS.gene72132:CDS |
| CATTCCATCTTGACTTGTCA+CGG | 0.515702 | 4.2:+6444401 | None:intergenic |
| TTCAATCACATCAGGGTACA+AGG | 0.515784 | 4.2:+6445036 | None:intergenic |
| AGGGGAATCGGGAGTGTGAA+CGG | 0.516292 | 4.2:+6446189 | None:intergenic |
| GTGAACGGAGTGGGGACCAC+CGG | 0.517539 | 4.2:+6446204 | None:intergenic |
| AAAGTGATTAATAATACAGT+GGG | 0.519092 | 4.2:-6445503 | MS.gene72132:CDS |
| TGGGAAGGTGACTCATACGC+CGG | 0.519837 | 4.2:-6445615 | MS.gene72132:intron |
| AAAGCCGTCGGGGAAGGAAG+GGG | 0.520124 | 4.2:+6446171 | None:intergenic |
| TATTCCCACTCAATTGTTGA+AGG | 0.524026 | 4.2:+6443705 | None:intergenic |
| ATTCAGTCAATCAAAGATGC+TGG | 0.527113 | 4.2:-6444528 | MS.gene72132:CDS |
| TGCCTTAGATGTTCTCCGAC+AGG | 0.531680 | 4.2:-6444653 | MS.gene72132:intron |
| AGAAAGCCGTCGGGGAAGGA+AGG | 0.532276 | 4.2:+6446169 | None:intergenic |
| CCGGAGAGAATGACGAGGGA+GGG | 0.536699 | 4.2:+6446223 | None:intergenic |
| TAAGGAGCAGGAACGTGTGA+TGG | 0.541741 | 4.2:-6445257 | MS.gene72132:CDS |
| TGCAAGACCAGGCCCAGGGA+AGG | 0.542703 | 4.2:+6444708 | None:intergenic |
| ACCATAGTTCATAAAGCCAT+TGG | 0.544087 | 4.2:-6445422 | MS.gene72132:CDS |
| CGGCTCTGAGTGCAACAACA+TGG | 0.545340 | 4.2:+6444421 | None:intergenic |
| TAAAACGTCATCCCTTCCCT+GGG | 0.546430 | 4.2:-6444720 | MS.gene72132:CDS |
| GCAAGACCAGGCCCAGGGAA+GGG | 0.552040 | 4.2:+6444709 | None:intergenic |
| CGGAGAGAATGACGAGGGAG+GGG | 0.552242 | 4.2:+6446224 | None:intergenic |
| ACCGAGAACAGGAACTGCAT+TGG | 0.554925 | 4.2:+6446132 | None:intergenic |
| ACGTCAATTAGGGAGGATCA+TGG | 0.556420 | 4.2:-6444761 | MS.gene72132:CDS |
| GGAGGGGTTGAGTTCAGTGA+TGG | 0.557696 | 4.2:+6446240 | None:intergenic |
| TGACAGATCCTGAAGTAAAG+AGG | 0.559123 | 4.2:-6445156 | MS.gene72132:CDS |
| TTGAAGAAAGCCGTCGGGGA+AGG | 0.559604 | 4.2:+6446165 | None:intergenic |
| CCTGTTCTCGGTATCTGCTA+CGG | 0.560452 | 4.2:-6446121 | MS.gene72132:CDS |
| CTAGTTCTCATCCTCGACTT+CGG | 0.560880 | 4.2:-6446349 | MS.gene72132:CDS |
| CGCGAACTTCACCGCCGAGA+CGG | 0.560925 | 4.2:+6446080 | None:intergenic |
| ATTGAATCATGCCCACCACC+TGG | 0.563547 | 4.2:-6445019 | MS.gene72132:CDS |
| GTTTCACGCAAAATCTGTAA+TGG | 0.563756 | 4.2:-6443774 | MS.gene72132:CDS |
| CTAACTGCAAGACCAGGCCC+AGG | 0.566444 | 4.2:+6444703 | None:intergenic |
| GTTCCCTGAACCAAGTAAGA+AGG | 0.567722 | 4.2:+6445058 | None:intergenic |
| TCCCTCGTCATTCTCTCCGG+TGG | 0.567925 | 4.2:-6446220 | MS.gene72132:CDS |
| TCCCACTCAATTGTTGAAGG+AGG | 0.570083 | 4.2:+6443708 | None:intergenic |
| GGGGTTCTCGATGGCAGCGA+CGG | 0.572007 | 4.2:+6445889 | None:intergenic |
| TTCATAAAGCCATTGGCGAT+AGG | 0.572442 | 4.2:-6445415 | MS.gene72132:CDS |
| GCCTCCTTCAACAATTGAGT+GGG | 0.574342 | 4.2:-6443709 | MS.gene72132:CDS |
| GAAACACGCAGGAGTATGGC+CGG | 0.577417 | 4.2:-6446054 | MS.gene72132:CDS |
| AGACCATAAAATTTGGCAGA+GGG | 0.578757 | 4.2:+6445869 | None:intergenic |
| CTCGGCGGTGAAGTTCGCGT+TGG | 0.580756 | 4.2:-6446076 | MS.gene72132:CDS |
| AAGATGGAATGACAGCAGAC+TGG | 0.581634 | 4.2:-6444389 | MS.gene72132:intron |
| GGCTCTGAGTGCAACAACAT+GGG | 0.583042 | 4.2:+6444422 | None:intergenic |
| GAAGAGAAGAAGTGCCGTTG+AGG | 0.585102 | 4.2:+6446266 | None:intergenic |
| TCGGGAGTGTGAACGGAGTG+GGG | 0.587305 | 4.2:+6446196 | None:intergenic |
| AGCCCATTGAAGAAAGCCGT+CGG | 0.590042 | 4.2:+6446159 | None:intergenic |
| AGAACTCTAACTGCAAGACC+AGG | 0.590896 | 4.2:+6444697 | None:intergenic |
| CACGCAGGAGTATGGCCGGA+TGG | 0.594351 | 4.2:-6446050 | MS.gene72132:CDS |
| GTCATTTGTGCCTTATCTGG+TGG | 0.595067 | 4.2:-6445467 | MS.gene72132:CDS |
| ATGTTTGTGGGATTTCAGCA+GGG | 0.596794 | 4.2:-6445559 | MS.gene72132:CDS |
| CATGCCCACCACCTGGAAGT+GGG | 0.599206 | 4.2:-6445012 | MS.gene72132:CDS |
| TACTGGTAAGAAAACTGCAA+AGG | 0.601593 | 4.2:+6444482 | None:intergenic |
| ATCAAGAGCCATCATAATGT+CGG | 0.606367 | 4.2:-6444971 | MS.gene72132:CDS |
| TTTGGCAGAGGGGTTCTCGA+TGG | 0.608956 | 4.2:+6445880 | None:intergenic |
| AGCCTCCTTCAACAATTGAG+TGG | 0.609163 | 4.2:-6443710 | MS.gene72132:CDS |
| AACTATGGTAGCAGCAACAG+TGG | 0.609789 | 4.2:+6445436 | None:intergenic |
| GACCATAAAATTTGGCAGAG+GGG | 0.610716 | 4.2:+6445870 | None:intergenic |
| ACAATGAAGCCTATCGCCAA+TGG | 0.610723 | 4.2:+6445406 | None:intergenic |
| AGAGCCGTGACAAGTCAAGA+TGG | 0.616452 | 4.2:-6444405 | MS.gene72132:CDS |
| TGTATTGAGAACCGAAGTCG+AGG | 0.618773 | 4.2:+6446338 | None:intergenic |
| GTTCTGGGTGACGTGACTGA+AGG | 0.621656 | 4.2:-6444679 | MS.gene72132:CDS |
| TAATGTCGGTGGTCTTCCAA+AGG | 0.622152 | 4.2:-6444957 | MS.gene72132:CDS |
| AAGGTGACTCATACGCCGGA+GGG | 0.623263 | 4.2:-6445611 | MS.gene72132:CDS |
| CAGATTGTTTGGATGAGTCA+TGG | 0.625708 | 4.2:-6445971 | MS.gene72132:CDS |
| CAAAGTGATTAATAATACAG+TGG | 0.630032 | 4.2:-6445504 | MS.gene72132:CDS |
| TTCGGATACGGCGAGTGATG+AGG | 0.631967 | 4.2:+6446311 | None:intergenic |
| GATTCCCCTTCCTTCCCCGA+CGG | 0.633487 | 4.2:-6446175 | MS.gene72132:CDS |
| TTCAGCAGGGTGGAAGATGG+AGG | 0.635225 | 4.2:-6445546 | MS.gene72132:CDS |
| ATGATGGCTCTTGATGGTAT+GGG | 0.637099 | 4.2:+6444979 | None:intergenic |
| CCCATTGAAGAAAGCCGTCG+GGG | 0.638613 | 4.2:+6446161 | None:intergenic |
| GTCGTGGCACGAAGTCAACA+AGG | 0.638723 | 4.2:-6445914 | MS.gene72132:CDS |
| AGGATCATGGATGTCCCTGA+GGG | 0.638998 | 4.2:-6444748 | MS.gene72132:CDS |
| GCCACGACATTGAAACCAGA+AGG | 0.640831 | 4.2:+6445929 | None:intergenic |
| ACCGGAGAGAATGACGAGGG+AGG | 0.643815 | 4.2:+6446222 | None:intergenic |
| AAGACCATAAAATTTGGCAG+AGG | 0.647998 | 4.2:+6445868 | None:intergenic |
| GCACAACACGATTCACACCA+CGG | 0.648587 | 4.2:+6443748 | None:intergenic |
| GGCATGATTCAATCACATCA+GGG | 0.655836 | 4.2:+6445029 | None:intergenic |
| TAAAGGTACGTCAATTAGGG+AGG | 0.658939 | 4.2:-6444768 | MS.gene72132:intron |
| AAGAGCCATCATAATGTCGG+TGG | 0.662337 | 4.2:-6444968 | MS.gene72132:CDS |
| GAAGGTGACTCATACGCCGG+AGG | 0.662543 | 4.2:-6445612 | MS.gene72132:intron |
| GAGGATCATGGATGTCCCTG+AGG | 0.671870 | 4.2:-6444749 | MS.gene72132:CDS |
| ACCACCGGAGAGAATGACGA+GGG | 0.673607 | 4.2:+6446219 | None:intergenic |
| TAACTGCAAGACCAGGCCCA+GGG | 0.675071 | 4.2:+6444704 | None:intergenic |
| TTTGTGGGATTTCAGCAGGG+TGG | 0.679722 | 4.2:-6445556 | MS.gene72132:CDS |
| AAAATCTGTAATGGTGTCCG+TGG | 0.698688 | 4.2:-6443765 | MS.gene72132:CDS |
| GGCAGAGAGAGAAAACGGAG+AGG | 0.709889 | 4.2:+6446287 | None:intergenic |
| GACCACCGGAGAGAATGACG+AGG | 0.712882 | 4.2:+6446218 | None:intergenic |
| AGTTCGCGTTGGAAACACGC+AGG | 0.714465 | 4.2:-6446065 | MS.gene72132:CDS |
| TGGTCTTCAGTATCACCCTG+AGG | 0.715570 | 4.2:-6445852 | MS.gene72132:intron |
| CTTCTTGTTAGCCGTCTCGG+CGG | 0.726294 | 4.2:-6446091 | MS.gene72132:CDS |
| AAGTGATTAATAATACAGTG+GGG | 0.782696 | 4.2:-6445502 | MS.gene72132:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTATTTCTTTTTTAAA+TGG | - | chr4.2:6445803-6445822 | MS.gene72132:intron | 10.0% |
| !! | AAATTGAATCAAAATATTGA+AGG | + | chr4.2:6445511-6445530 | None:intergenic | 15.0% |
| !! | TTTATTCATTGTAAAGATAT+TGG | - | chr4.2:6444746-6444765 | MS.gene72132:CDS | 15.0% |
| !!! | AACCTTTAAAATTTCAAATA+CGG | - | chr4.2:6446203-6446222 | MS.gene72132:CDS | 15.0% |
| !!! | ATTGTTATTTGTTCTTTTTT+GGG | - | chr4.2:6444452-6444471 | MS.gene72132:CDS | 15.0% |
| !!! | TGATAGAACAAAATTTATTT+TGG | - | chr4.2:6445872-6445891 | MS.gene72132:CDS | 15.0% |
| !! | AAAGTGATTAATAATACAGT+GGG | - | chr4.2:6444583-6444602 | MS.gene72132:intron | 20.0% |
| !! | CTGTTAAAAAGAAAAAACTA+AGG | + | chr4.2:6445986-6446005 | None:intergenic | 20.0% |
| !! | GAAAACAAAATAAAGTTATG+CGG | + | chr4.2:6445787-6445806 | None:intergenic | 20.0% |
| !! | TAAAGATATTGGATTACAAA+CGG | - | chr4.2:6444757-6444776 | MS.gene72132:CDS | 20.0% |
| !!! | AACTTGATAAAATGATAATG+TGG | + | chr4.2:6446064-6446083 | None:intergenic | 20.0% |
| !!! | ATTTTCATTTCCTTGTATAA+AGG | - | chr4.2:6445301-6445320 | MS.gene72132:intron | 20.0% |
| !!! | ATTTTCTATTTGATGTTTGT+GGG | - | chr4.2:6444515-6444534 | MS.gene72132:CDS | 20.0% |
| !!! | GATTGTTATTTGTTCTTTTT+TGG | - | chr4.2:6444451-6444470 | MS.gene72132:CDS | 20.0% |
| !!! | TAAGGTATATTTTAGCTTTT+AGG | + | chr4.2:6445968-6445987 | None:intergenic | 20.0% |
| !!! | TGCTAGTTCATTTTAATAAT+TGG | - | chr4.2:6446168-6446187 | MS.gene72132:CDS | 20.0% |
| ! | AAGTGATTAATAATACAGTG+GGG | - | chr4.2:6444584-6444603 | MS.gene72132:intron | 25.0% |
| ! | AATCAAAATTAAACACAAGC+AGG | + | chr4.2:6444276-6444295 | None:intergenic | 25.0% |
| ! | AGGTATATTATTATACCTCA+GGG | + | chr4.2:6444252-6444271 | None:intergenic | 25.0% |
| ! | AGTTTCAATTTCATATCCTT+TGG | + | chr4.2:6445148-6445167 | None:intergenic | 25.0% |
| ! | ATACTGAAGACCATAAAATT+TGG | + | chr4.2:6444227-6444246 | None:intergenic | 25.0% |
| ! | CAAAGTGATTAATAATACAG+TGG | - | chr4.2:6444582-6444601 | MS.gene72132:intron | 25.0% |
| ! | CAATTTCTTACAAAGCTTAA+AGG | - | chr4.2:6444905-6444924 | MS.gene72132:intron | 25.0% |
| ! | CTATCAATCAATTATATCGA+TGG | + | chr4.2:6444389-6444408 | None:intergenic | 25.0% |
| ! | GAAGTAAAGAGGAAAATTAT+TGG | - | chr4.2:6444941-6444960 | MS.gene72132:CDS | 25.0% |
| ! | TAGGTATATTATTATACCTC+AGG | + | chr4.2:6444253-6444272 | None:intergenic | 25.0% |
| ! | TGTAATTTGAATTGAATTCC+AGG | - | chr4.2:6446259-6446278 | MS.gene72132:CDS | 25.0% |
| ! | TTAAAATGAACTAGCATCAA+AGG | + | chr4.2:6446164-6446183 | None:intergenic | 25.0% |
| !! | ATAATTTTCCTCTTTACTTC+AGG | + | chr4.2:6444941-6444960 | None:intergenic | 25.0% |
| !! | CATTTTCTATTTGATGTTTG+TGG | - | chr4.2:6444514-6444533 | MS.gene72132:CDS | 25.0% |
| !! | CTTTAAGCTTTGTAAGAAAT+TGG | + | chr4.2:6444907-6444926 | None:intergenic | 25.0% |
| !! | GATTCAATTTTTCTTTTCTC+AGG | - | chr4.2:6445521-6445540 | MS.gene72132:CDS | 25.0% |
| !! | TAAATGAAGATCCGTTTTAA+AGG | + | chr4.2:6444858-6444877 | None:intergenic | 25.0% |
| !!! | AGCCGTATTTGAAATTTTAA+AGG | + | chr4.2:6446208-6446227 | None:intergenic | 25.0% |
| !!! | ATATTTTAGCTTTTAGGACT+TGG | + | chr4.2:6445962-6445981 | None:intergenic | 25.0% |
| !!! | TATTTTAGCTTTTAGGACTT+GGG | + | chr4.2:6445961-6445980 | None:intergenic | 25.0% |
| !!! | TCTATCAAATAGTTTGCTAA+AGG | + | chr4.2:6445859-6445878 | None:intergenic | 25.0% |
| !!! | TTATTTGTTCTTTTTTGGGA+AGG | - | chr4.2:6444456-6444475 | MS.gene72132:CDS | 25.0% |
| AAAATTAAACACAAGCAGGT+AGG | + | chr4.2:6444272-6444291 | None:intergenic | 30.0% | |
| AATGGTACCAAATTACCATT+AGG | - | chr4.2:6445821-6445840 | MS.gene72132:intron | 30.0% | |
| AATTGACGTACCTTTATACA+AGG | + | chr4.2:6445314-6445333 | None:intergenic | 30.0% | |
| ATCATCTTAATAGCACTTTG+CGG | - | chr4.2:6446232-6446251 | MS.gene72132:CDS | 30.0% | |
| TCCTTGAAAAGTAGTTTAAG+TGG | + | chr4.2:6445178-6445197 | None:intergenic | 30.0% | |
| TTAACCTCCTAATGGTAATT+TGG | + | chr4.2:6445831-6445850 | None:intergenic | 30.0% | |
| TTGGAAATATATCAGCTTCT+GGG | - | chr4.2:6446124-6446143 | MS.gene72132:CDS | 30.0% | |
| TTGGACATAATCAGATTGTT+TGG | - | chr4.2:6444104-6444123 | MS.gene72132:intron | 30.0% | |
| TTTCAACTGAAGTATGCATA+TGG | - | chr4.2:6445725-6445744 | MS.gene72132:intron | 30.0% | |
| ! | AGGTCTGATTTTACTTGTTT+TGG | + | chr4.2:6443719-6443738 | None:intergenic | 30.0% |
| ! | GTATAAAGGTACGTCAATTA+GGG | - | chr4.2:6445315-6445334 | MS.gene72132:intron | 30.0% |
| ! | TGTATAAAGGTACGTCAATT+AGG | - | chr4.2:6445314-6445333 | MS.gene72132:intron | 30.0% |
| ! | TGTGATGGAAACCTTTAAAA+CGG | - | chr4.2:6444844-6444863 | MS.gene72132:intron | 30.0% |
| ! | TTTTGCTCAAAAGCTAGAAA+AGG | - | chr4.2:6444991-6445010 | MS.gene72132:CDS | 30.0% |
| !! | CATTGTGTTTTTGTTGACAA+TGG | - | chr4.2:6444697-6444716 | MS.gene72132:CDS | 30.0% |
| !! | TAAACTACTTTTCAAGGATG+AGG | - | chr4.2:6445180-6445199 | MS.gene72132:CDS | 30.0% |
| AACGACCCTAGTATCTAATT+AGG | + | chr4.2:6446097-6446116 | None:intergenic | 35.0% | |
| AAGACCATAAAATTTGGCAG+AGG | + | chr4.2:6444221-6444240 | None:intergenic | 35.0% | |
| AATGAATAAACCGAGACTAG+TGG | + | chr4.2:6444736-6444755 | None:intergenic | 35.0% | |
| ACCATAGTTCATAAAGCCAT+TGG | - | chr4.2:6444664-6444683 | MS.gene72132:CDS | 35.0% | |
| ACGAGCCTAATTAGATACTA+GGG | - | chr4.2:6446089-6446108 | MS.gene72132:CDS | 35.0% | |
| AGACCATAAAATTTGGCAGA+GGG | + | chr4.2:6444220-6444239 | None:intergenic | 35.0% | |
| ATCAAGAGCCATCATAATGT+CGG | - | chr4.2:6445115-6445134 | MS.gene72132:CDS | 35.0% | |
| ATTCAGTCAATCAAAGATGC+TGG | - | chr4.2:6445558-6445577 | MS.gene72132:CDS | 35.0% | |
| CAAAAGCTAGAAAAGGAACT+TGG | - | chr4.2:6444998-6445017 | MS.gene72132:CDS | 35.0% | |
| CAGAAGCTGATATATTTCCA+AGG | + | chr4.2:6446125-6446144 | None:intergenic | 35.0% | |
| CTTGCCATATTACGTCATAA+AGG | + | chr4.2:6445584-6445603 | None:intergenic | 35.0% | |
| CTTGGAAATATATCAGCTTC+TGG | - | chr4.2:6446123-6446142 | MS.gene72132:CDS | 35.0% | |
| GTTTCACGCAAAATCTGTAA+TGG | - | chr4.2:6446312-6446331 | MS.gene72132:CDS | 35.0% | |
| TACTGGTAAGAAAACTGCAA+AGG | + | chr4.2:6445607-6445626 | None:intergenic | 35.0% | |
| TATTCCCACTCAATTGTTGA+AGG | + | chr4.2:6446384-6446403 | None:intergenic | 35.0% | |
| TTCTTACCAGTAAGATCTGT+TGG | - | chr4.2:6445615-6445634 | MS.gene72132:intron | 35.0% | |
| TTGCTGTGTCTATAGGTATA+AGG | - | chr4.2:6444811-6444830 | MS.gene72132:intron | 35.0% | |
| TTTGGACCTTAATTTCCATC+CGG | + | chr4.2:6444054-6444073 | None:intergenic | 35.0% | |
| ! | ATGATGCTGGATAACTCTTT+TGG | - | chr4.2:6445750-6445769 | MS.gene72132:intron | 35.0% |
| ! | GATTTTGTTGCTGTGTCTAT+AGG | - | chr4.2:6444804-6444823 | MS.gene72132:intron | 35.0% |
| ! | TCTCTCACACAAGCTTTTAA+TGG | + | chr4.2:6445917-6445936 | None:intergenic | 35.0% |
| ! | TTTTGCGTGAAACATCATCA+AGG | + | chr4.2:6446305-6446324 | None:intergenic | 35.0% |
| !! | GCCACTTAAACTACTTTTCA+AGG | - | chr4.2:6445174-6445193 | MS.gene72132:CDS | 35.0% |
| AAAATCTGTAATGGTGTCCG+TGG | - | chr4.2:6446321-6446340 | MS.gene72132:CDS | 40.0% | |
| AGACCTTCTTACTTGGTTCA+GGG | - | chr4.2:6445025-6445044 | MS.gene72132:CDS | 40.0% | |
| AGGCACATTTAACCTCCTAA+TGG | + | chr4.2:6445839-6445858 | None:intergenic | 40.0% | |
| ATGTTTGTGGGATTTCAGCA+GGG | - | chr4.2:6444527-6444546 | MS.gene72132:CDS | 40.0% | |
| CACGAGCCTAATTAGATACT+AGG | - | chr4.2:6446088-6446107 | MS.gene72132:CDS | 40.0% | |
| CAGATTGTTTGGATGAGTCA+TGG | - | chr4.2:6444115-6444134 | MS.gene72132:intron | 40.0% | |
| GACATTATGATGGCTCTTGA+TGG | + | chr4.2:6445116-6445135 | None:intergenic | 40.0% | |
| GACCATAAAATTTGGCAGAG+GGG | + | chr4.2:6444219-6444238 | None:intergenic | 40.0% | |
| GGCATGATTCAATCACATCA+GGG | + | chr4.2:6445060-6445079 | None:intergenic | 40.0% | |
| GGTACCAAATTACCATTAGG+AGG | - | chr4.2:6445824-6445843 | MS.gene72132:intron | 40.0% | |
| GTAAGATCTGTTGGAGTTCA+AGG | - | chr4.2:6445624-6445643 | MS.gene72132:intron | 40.0% | |
| TATGCATATGGCTATGATGC+TGG | - | chr4.2:6445737-6445756 | MS.gene72132:intron | 40.0% | |
| TGAACTCCAACAGATCTTAC+TGG | + | chr4.2:6445624-6445643 | None:intergenic | 40.0% | |
| TGACAGATCCTGAAGTAAAG+AGG | - | chr4.2:6444930-6444949 | MS.gene72132:CDS | 40.0% | |
| TGTCTATAGGTATAAGGAGC+AGG | - | chr4.2:6444817-6444836 | MS.gene72132:intron | 40.0% | |
| TTATGTCCAACTTTCTCAGC+AGG | + | chr4.2:6444094-6444113 | None:intergenic | 40.0% | |
| TTCAATCACATCAGGGTACA+AGG | + | chr4.2:6445053-6445072 | None:intergenic | 40.0% | |
| TTCATAAAGCCATTGGCGAT+AGG | - | chr4.2:6444671-6444690 | MS.gene72132:CDS | 40.0% | |
| ! | AACCCCTCTGCCAAATTTTA+TGG | - | chr4.2:6444214-6444233 | MS.gene72132:intron | 40.0% |
| ! | ATGATGGCTCTTGATGGTAT+GGG | + | chr4.2:6445110-6445129 | None:intergenic | 40.0% |
| ! | CATGTCATTTGTGCCTTATC+TGG | - | chr4.2:6444616-6444635 | MS.gene72132:intron | 40.0% |
| ! | CTGGCCTTTATGACGTAATA+TGG | - | chr4.2:6445577-6445596 | MS.gene72132:CDS | 40.0% |
| ! | CTTTTTCCTGCTGAGAAAGT+TGG | - | chr4.2:6444085-6444104 | MS.gene72132:intron | 40.0% |
| ! | TAAAGGTACGTCAATTAGGG+AGG | - | chr4.2:6445318-6445337 | MS.gene72132:intron | 40.0% |
| ! | TATGATGGCTCTTGATGGTA+TGG | + | chr4.2:6445111-6445130 | None:intergenic | 40.0% |
| !! | CATTCCATCTTGACTTGTCA+CGG | + | chr4.2:6445688-6445707 | None:intergenic | 40.0% |
| !! | GCCAATGGCTTTATGAACTA+TGG | + | chr4.2:6444668-6444687 | None:intergenic | 40.0% |
| !!! | GACGTTTTAGAAATCCCTCA+GGG | + | chr4.2:6445355-6445374 | None:intergenic | 40.0% |
| !!! | TGACGTTTTAGAAATCCCTC+AGG | + | chr4.2:6445356-6445375 | None:intergenic | 40.0% |
| AACTATGGTAGCAGCAACAG+TGG | + | chr4.2:6444653-6444672 | None:intergenic | 45.0% | |
| AAGAGCCATCATAATGTCGG+TGG | - | chr4.2:6445118-6445137 | MS.gene72132:CDS | 45.0% | |
| AAGATGGAATGACAGCAGAC+TGG | - | chr4.2:6445697-6445716 | MS.gene72132:intron | 45.0% | |
| ACAATGAAGCCTATCGCCAA+TGG | + | chr4.2:6444683-6444702 | None:intergenic | 45.0% | |
| ACGTCAATTAGGGAGGATCA+TGG | - | chr4.2:6445325-6445344 | MS.gene72132:intron | 45.0% | |
| AGAACTCTAACTGCAAGACC+AGG | + | chr4.2:6445392-6445411 | None:intergenic | 45.0% | |
| AGCCTCCTTCAACAATTGAG+TGG | - | chr4.2:6446376-6446395 | MS.gene72132:CDS | 45.0% | |
| CAAAAGCTCCATGTACCTGT+CGG | + | chr4.2:6445451-6445470 | None:intergenic | 45.0% | |
| CAGACCTTCTTACTTGGTTC+AGG | - | chr4.2:6445024-6445043 | MS.gene72132:CDS | 45.0% | |
| CTTGTGCTCAAAGTAGTACC+TGG | + | chr4.2:6446280-6446299 | None:intergenic | 45.0% | |
| GAAGACCACCGACATTATGA+TGG | + | chr4.2:6445126-6445145 | None:intergenic | 45.0% | |
| GAAGCTGTTACTCTTCCTTC+TGG | - | chr4.2:6444142-6444161 | MS.gene72132:intron | 45.0% | |
| GATGTTTGTGGGATTTCAGC+AGG | - | chr4.2:6444526-6444545 | MS.gene72132:CDS | 45.0% | |
| GCACAAATGACATGCTCATC+AGG | + | chr4.2:6444610-6444629 | None:intergenic | 45.0% | |
| GCCTCCTTCAACAATTGAGT+GGG | - | chr4.2:6446377-6446396 | MS.gene72132:CDS | 45.0% | |
| GGAATCAACACCACCAGATA+AGG | + | chr4.2:6444632-6444651 | None:intergenic | 45.0% | |
| GGGCATGATTCAATCACATC+AGG | + | chr4.2:6445061-6445080 | None:intergenic | 45.0% | |
| GGTCTTGCAGTTAGAGTTCT+GGG | - | chr4.2:6445392-6445411 | MS.gene72132:CDS | 45.0% | |
| GTATGGCCGGATGGAAATTA+AGG | - | chr4.2:6444045-6444064 | MS.gene72132:intron | 45.0% | |
| GTCATTTGTGCCTTATCTGG+TGG | - | chr4.2:6444619-6444638 | MS.gene72132:intron | 45.0% | |
| GTTCCCTGAACCAAGTAAGA+AGG | + | chr4.2:6445031-6445050 | None:intergenic | 45.0% | |
| GTTGAGGCAGAGAGAGAAAA+CGG | + | chr4.2:6443807-6443826 | None:intergenic | 45.0% | |
| TAAAACGTCATCCCTTCCCT+GGG | - | chr4.2:6445366-6445385 | MS.gene72132:intron | 45.0% | |
| TAATGTCGGTGGTCTTCCAA+AGG | - | chr4.2:6445129-6445148 | MS.gene72132:CDS | 45.0% | |
| TACCTGTCGGAGAACATCTA+AGG | + | chr4.2:6445438-6445457 | None:intergenic | 45.0% | |
| TCCAATGCAGTTCCTGTTCT+CGG | - | chr4.2:6443953-6443972 | MS.gene72132:intron | 45.0% | |
| TCCCACTCAATTGTTGAAGG+AGG | + | chr4.2:6446381-6446400 | None:intergenic | 45.0% | |
| TGGAAGCAGACCTTCTTACT+TGG | - | chr4.2:6445018-6445037 | MS.gene72132:CDS | 45.0% | |
| TGTATTGAGAACCGAAGTCG+AGG | + | chr4.2:6443751-6443770 | None:intergenic | 45.0% | |
| TTCAGTGTTTCCATTCCCTC+CGG | + | chr4.2:6444493-6444512 | None:intergenic | 45.0% | |
| ! | CTAGTTCTCATCCTCGACTT+CGG | - | chr4.2:6443737-6443756 | MS.gene72132:CDS | 45.0% |
| ! | GCTCTTGATGGTATGGGAAT+GGG | + | chr4.2:6445104-6445123 | None:intergenic | 45.0% |
| ! | GTTTTCTCTCTCTGCCTCAA+CGG | - | chr4.2:6443806-6443825 | MS.gene72132:CDS | 45.0% |
| ! | TGGTCTTGCAGTTAGAGTTC+TGG | - | chr4.2:6445391-6445410 | MS.gene72132:CDS | 45.0% |
| !! | TCCTTCTGGTTTCAATGTCG+TGG | - | chr4.2:6444156-6444175 | MS.gene72132:intron | 45.0% |
| !! | TTGTTGACAATGGCTTGCTC+AGG | - | chr4.2:6444707-6444726 | MS.gene72132:CDS | 45.0% |
| !!! | GAAAAAGAGCAGAGGCGTTT+TGG | + | chr4.2:6444072-6444091 | None:intergenic | 45.0% |
| AAACGGAGAGGCTTCGGATA+CGG | + | chr4.2:6443790-6443809 | None:intergenic | 50.0% | |
| ACCGAGAACAGGAACTGCAT+TGG | + | chr4.2:6443957-6443976 | None:intergenic | 50.0% | |
| ACTAGGGTCGTTATGCTCCT+TGG | - | chr4.2:6446105-6446124 | MS.gene72132:CDS | 50.0% | |
| AGAGCCGTGACAAGTCAAGA+TGG | - | chr4.2:6445681-6445700 | MS.gene72132:intron | 50.0% | |
| AGCCCATTGAAGAAAGCCGT+CGG | + | chr4.2:6443930-6443949 | None:intergenic | 50.0% | |
| AGGATCATGGATGTCCCTGA+GGG | - | chr4.2:6445338-6445357 | MS.gene72132:intron | 50.0% | |
| ATTGAATCATGCCCACCACC+TGG | - | chr4.2:6445067-6445086 | MS.gene72132:CDS | 50.0% | |
| CAGCTTCTTGTTAGCCGTCT+CGG | - | chr4.2:6443992-6444011 | MS.gene72132:intron | 50.0% | |
| CCTGTTCTCGGTATCTGCTA+CGG | - | chr4.2:6443965-6443984 | MS.gene72132:intron | 50.0% | |
| CGAAGTCGAGGATGAGAACT+AGG | + | chr4.2:6443739-6443758 | None:intergenic | 50.0% | |
| CTAAAACGTCATCCCTTCCC+TGG | - | chr4.2:6445365-6445384 | MS.gene72132:intron | 50.0% | |
| CTCAGCAGGAAAAAGAGCAG+AGG | + | chr4.2:6444080-6444099 | None:intergenic | 50.0% | |
| GAAGATGGAGGATGTGTTGG+AGG | - | chr4.2:6444552-6444571 | MS.gene72132:intron | 50.0% | |
| GAGAGAAAACGGAGAGGCTT+CGG | + | chr4.2:6443796-6443815 | None:intergenic | 50.0% | |
| GATGTTCTCCGACAGGTACA+TGG | - | chr4.2:6445440-6445459 | MS.gene72132:CDS | 50.0% | |
| GATTTCAGCAGGGTGGAAGA+TGG | - | chr4.2:6444537-6444556 | MS.gene72132:CDS | 50.0% | |
| GCACAACACGATTCACACCA+CGG | + | chr4.2:6446341-6446360 | None:intergenic | 50.0% | |
| GCAGCATCAACACACTCAAC+TGG | + | chr4.2:6444881-6444900 | None:intergenic | 50.0% | |
| GCCACGACATTGAAACCAGA+AGG | + | chr4.2:6444160-6444179 | None:intergenic | 50.0% | |
| GTGGAAGATGGAGGATGTGT+TGG | - | chr4.2:6444549-6444568 | MS.gene72132:intron | 50.0% | |
| GTTGGAAACACGCAGGAGTA+TGG | - | chr4.2:6444028-6444047 | MS.gene72132:intron | 50.0% | |
| TAAGGAGCAGGAACGTGTGA+TGG | - | chr4.2:6444829-6444848 | MS.gene72132:intron | 50.0% | |
| TAGGACTTGGGCAGATGTAC+AGG | + | chr4.2:6445949-6445968 | None:intergenic | 50.0% | |
| TGCCTTAGATGTTCTCCGAC+AGG | - | chr4.2:6445433-6445452 | MS.gene72132:CDS | 50.0% | |
| TGGTCTTCAGTATCACCCTG+AGG | - | chr4.2:6444234-6444253 | MS.gene72132:intron | 50.0% | |
| TTTGTGGGATTTCAGCAGGG+TGG | - | chr4.2:6444530-6444549 | MS.gene72132:CDS | 50.0% | |
| ! | GGCTCTTGATGGTATGGGAA+TGG | + | chr4.2:6445105-6445124 | None:intergenic | 50.0% |
| ! | TTTTCCCACTTCCAGGTGGT+GGG | + | chr4.2:6445081-6445100 | None:intergenic | 50.0% |
| !! | GAAGAGAAGAAGTGCCGTTG+AGG | + | chr4.2:6443823-6443842 | None:intergenic | 50.0% |
| !! | GAATGGGTTTTCCCACTTCC+AGG | + | chr4.2:6445088-6445107 | None:intergenic | 50.0% |
| !! | GGCTCTGAGTGCAACAACAT+GGG | + | chr4.2:6445667-6445686 | None:intergenic | 50.0% |
| AAGGTGACTCATACGCCGGA+GGG | - | chr4.2:6444475-6444494 | MS.gene72132:CDS | 55.0% | |
| ACCACCGGAGAGAATGACGA+GGG | + | chr4.2:6443870-6443889 | None:intergenic | 55.0% | |
| AGTTCGCGTTGGAAACACGC+AGG | - | chr4.2:6444021-6444040 | MS.gene72132:intron | 55.0% | |
| CCCATTGAAGAAAGCCGTCG+GGG | + | chr4.2:6443928-6443947 | None:intergenic | 55.0% | |
| CCCCGACGGCTTTCTTCAAT+GGG | - | chr4.2:6443925-6443944 | MS.gene72132:intron | 55.0% | |
| CCGTAGCAGATACCGAGAAC+AGG | + | chr4.2:6443968-6443987 | None:intergenic | 55.0% | |
| CTTCTTGTTAGCCGTCTCGG+CGG | - | chr4.2:6443995-6444014 | MS.gene72132:intron | 55.0% | |
| GAGGATCATGGATGTCCCTG+AGG | - | chr4.2:6445337-6445356 | MS.gene72132:intron | 55.0% | |
| GCCCATTGAAGAAAGCCGTC+GGG | + | chr4.2:6443929-6443948 | None:intergenic | 55.0% | |
| GGAGGGGTTGAGTTCAGTGA+TGG | + | chr4.2:6443849-6443868 | None:intergenic | 55.0% | |
| GGCAGAGAGAGAAAACGGAG+AGG | + | chr4.2:6443802-6443821 | None:intergenic | 55.0% | |
| GTCGTGGCACGAAGTCAACA+AGG | - | chr4.2:6444172-6444191 | MS.gene72132:intron | 55.0% | |
| TAACTGCAAGACCAGGCCCA+GGG | + | chr4.2:6445385-6445404 | None:intergenic | 55.0% | |
| TCCCCGACGGCTTTCTTCAA+TGG | - | chr4.2:6443924-6443943 | MS.gene72132:intron | 55.0% | |
| TGGGAAGGTGACTCATACGC+CGG | - | chr4.2:6444471-6444490 | MS.gene72132:CDS | 55.0% | |
| TTCAGCAGGGTGGAAGATGG+AGG | - | chr4.2:6444540-6444559 | MS.gene72132:CDS | 55.0% | |
| TTCGGATACGGCGAGTGATG+AGG | + | chr4.2:6443778-6443797 | None:intergenic | 55.0% | |
| TTGAAGAAAGCCGTCGGGGA+AGG | + | chr4.2:6443924-6443943 | None:intergenic | 55.0% | |
| TTTGGCAGAGGGGTTCTCGA+TGG | + | chr4.2:6444209-6444228 | None:intergenic | 55.0% | |
| ! | AATCGGGAGTGTGAACGGAG+TGG | + | chr4.2:6443895-6443914 | None:intergenic | 55.0% |
| ! | AGGGGAATCGGGAGTGTGAA+CGG | + | chr4.2:6443900-6443919 | None:intergenic | 55.0% |
| ! | ATCGGGAGTGTGAACGGAGT+GGG | + | chr4.2:6443894-6443913 | None:intergenic | 55.0% |
| ! | GAAACACGCAGGAGTATGGC+CGG | - | chr4.2:6444032-6444051 | MS.gene72132:intron | 55.0% |
| ! | GCTCAGGTGACCACTAGTCT+CGG | - | chr4.2:6444723-6444742 | MS.gene72132:CDS | 55.0% |
| ! | GTTCTGGGTGACGTGACTGA+AGG | - | chr4.2:6445407-6445426 | MS.gene72132:CDS | 55.0% |
| ! | GTTTTCCCACTTCCAGGTGG+TGG | + | chr4.2:6445082-6445101 | None:intergenic | 55.0% |
| ! | TGGGTTTTCCCACTTCCAGG+TGG | + | chr4.2:6445085-6445104 | None:intergenic | 55.0% |
| !! | CGGCTCTGAGTGCAACAACA+TGG | + | chr4.2:6445668-6445687 | None:intergenic | 55.0% |
| AAAGCCGTCGGGGAAGGAAG+GGG | + | chr4.2:6443918-6443937 | None:intergenic | 60.0% | |
| ACCGGAGAGAATGACGAGGG+AGG | + | chr4.2:6443867-6443886 | None:intergenic | 60.0% | |
| AGAAAGCCGTCGGGGAAGGA+AGG | + | chr4.2:6443920-6443939 | None:intergenic | 60.0% | |
| CATGCCCACCACCTGGAAGT+GGG | - | chr4.2:6445074-6445093 | MS.gene72132:CDS | 60.0% | |
| CCCTCCCTCGTCATTCTCTC+CGG | - | chr4.2:6443863-6443882 | MS.gene72132:intron | 60.0% | |
| CCGGAGAGAATGACGAGGGA+GGG | + | chr4.2:6443866-6443885 | None:intergenic | 60.0% | |
| CGGAGAGAATGACGAGGGAG+GGG | + | chr4.2:6443865-6443884 | None:intergenic | 60.0% | |
| CTAACTGCAAGACCAGGCCC+AGG | + | chr4.2:6445386-6445405 | None:intergenic | 60.0% | |
| GAAAGCCGTCGGGGAAGGAA+GGG | + | chr4.2:6443919-6443938 | None:intergenic | 60.0% | |
| GAAGGTGACTCATACGCCGG+AGG | - | chr4.2:6444474-6444493 | MS.gene72132:CDS | 60.0% | |
| GACCACCGGAGAGAATGACG+AGG | + | chr4.2:6443871-6443890 | None:intergenic | 60.0% | |
| GACTCATACGCCGGAGGGAA+TGG | - | chr4.2:6444480-6444499 | MS.gene72132:CDS | 60.0% | |
| GATTCCCCTTCCTTCCCCGA+CGG | - | chr4.2:6443911-6443930 | MS.gene72132:intron | 60.0% | |
| GTCGGGGAAGGAAGGGGAAT+CGG | + | chr4.2:6443912-6443931 | None:intergenic | 60.0% | |
| TCATGCCCACCACCTGGAAG+TGG | - | chr4.2:6445073-6445092 | MS.gene72132:CDS | 60.0% | |
| TCCCTCGTCATTCTCTCCGG+TGG | - | chr4.2:6443866-6443885 | MS.gene72132:intron | 60.0% | |
| TCGGGGAAGGAAGGGGAATC+GGG | + | chr4.2:6443911-6443930 | None:intergenic | 60.0% | |
| ! | TCGGGAGTGTGAACGGAGTG+GGG | + | chr4.2:6443893-6443912 | None:intergenic | 60.0% |
| CGCGAACTTCACCGCCGAGA+CGG | + | chr4.2:6444009-6444028 | None:intergenic | 65.0% | |
| CTCGGCGGTGAAGTTCGCGT+TGG | - | chr4.2:6444010-6444029 | MS.gene72132:intron | 65.0% | |
| GCAAGACCAGGCCCAGGGAA+GGG | + | chr4.2:6445380-6445399 | None:intergenic | 65.0% | |
| GGGGTTCTCGATGGCAGCGA+CGG | + | chr4.2:6444200-6444219 | None:intergenic | 65.0% | |
| GTGAACGGAGTGGGGACCAC+CGG | + | chr4.2:6443885-6443904 | None:intergenic | 65.0% | |
| TGCAAGACCAGGCCCAGGGA+AGG | + | chr4.2:6445381-6445400 | None:intergenic | 65.0% | |
| ! | CACGCAGGAGTATGGCCGGA+TGG | - | chr4.2:6444036-6444055 | MS.gene72132:intron | 65.0% |
| CGTCATCCCTTCCCTGGGCC+TGG | - | chr4.2:6445371-6445390 | MS.gene72132:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 6443704 | 6446404 | 6443704 | ID=MS.gene72132 |
| chr4.2 | mRNA | 6443704 | 6446404 | 6443704 | ID=MS.gene72132.t1;Parent=MS.gene72132 |
| chr4.2 | exon | 6445853 | 6446404 | 6445853 | ID=MS.gene72132.t1.exon1;Parent=MS.gene72132.t1 |
| chr4.2 | CDS | 6445853 | 6446404 | 6445853 | ID=cds.MS.gene72132.t1;Parent=MS.gene72132.t1 |
| chr4.2 | exon | 6445380 | 6445630 | 6445380 | ID=MS.gene72132.t1.exon2;Parent=MS.gene72132.t1 |
| chr4.2 | CDS | 6445380 | 6445630 | 6445380 | ID=cds.MS.gene72132.t1;Parent=MS.gene72132.t1 |
| chr4.2 | exon | 6444907 | 6445282 | 6444907 | ID=MS.gene72132.t1.exon3;Parent=MS.gene72132.t1 |
| chr4.2 | CDS | 6444907 | 6445282 | 6444907 | ID=cds.MS.gene72132.t1;Parent=MS.gene72132.t1 |
| chr4.2 | exon | 6444654 | 6444785 | 6444654 | ID=MS.gene72132.t1.exon4;Parent=MS.gene72132.t1 |
| chr4.2 | CDS | 6444654 | 6444785 | 6444654 | ID=cds.MS.gene72132.t1;Parent=MS.gene72132.t1 |
| chr4.2 | exon | 6444390 | 6444565 | 6444390 | ID=MS.gene72132.t1.exon5;Parent=MS.gene72132.t1 |
| chr4.2 | CDS | 6444390 | 6444565 | 6444390 | ID=cds.MS.gene72132.t1;Parent=MS.gene72132.t1 |
| chr4.2 | exon | 6443704 | 6443827 | 6443704 | ID=MS.gene72132.t1.exon6;Parent=MS.gene72132.t1 |
| chr4.2 | CDS | 6443704 | 6443827 | 6443704 | ID=cds.MS.gene72132.t1;Parent=MS.gene72132.t1 |
| Gene Sequence |
| Protein sequence |
