Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72183.t1 | XP_013447003.1 | 90.8 | 1325 | 98 | 1 | 1 | 1301 | 1 | 1325 | 0.00E+00 | 2053.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72183.t1 | Q9LTJ8 | 41.9 | 74 | 40 | 2 | 178 | 249 | 32 | 104 | 6.3e-07 | 58.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72183.t1 | A0A072U5A2 | 90.8 | 1325 | 98 | 1 | 1 | 1301 | 1 | 1325 | 0.0e+00 | 2053.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051835 | MS.gene72183 | 0.800405 | 1.46E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72183.t1 | MTR_8g096930 | 91.094 | 1325 | 94 | 1 | 1 | 1301 | 1 | 1325 | 0.0 | 2424 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 278 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCGGGCTCTTTCTTCTTAC+TGG | 0.130822 | 4.2:-6942929 | None:intergenic |
GCTAGTGCCTTTCTTCTTAT+TGG | 0.147139 | 4.2:-6937723 | None:intergenic |
TTGTCTTCTACTTGGTTTAA+TGG | 0.156026 | 4.2:-6940385 | None:intergenic |
TTCTTCTTACTGGATTTGTT+TGG | 0.211320 | 4.2:-6942919 | None:intergenic |
TTTGGGTTGGTATGAAATTC+TGG | 0.220335 | 4.2:-6942901 | None:intergenic |
TTTGCATTTAAGACTCTTAC+AGG | 0.232400 | 4.2:+6945250 | MS.gene72183:CDS |
GTATCAGCGTTGCCAGATTT+TGG | 0.244275 | 4.2:+6945352 | MS.gene72183:CDS |
TTTGACCTCTTTCTTTCTCT+TGG | 0.263749 | 4.2:-6943565 | None:intergenic |
AAAACGTTGTACATCCTTCT+TGG | 0.276092 | 4.2:-6940334 | None:intergenic |
TAAGCTTTCAACTGGTTCTT+TGG | 0.281208 | 4.2:-6942464 | None:intergenic |
GACTCTCACTGGTGCTTTGC+CGG | 0.281449 | 4.2:+6943968 | MS.gene72183:CDS |
CAAAACATTTCAGTTTATAA+TGG | 0.284488 | 4.2:+6943405 | MS.gene72183:CDS |
TGTTTCTCCTCCTCCTTGTT+TGG | 0.291146 | 4.2:-6937755 | None:intergenic |
GATTTCTCATCATCCACTTC+AGG | 0.296303 | 4.2:-6943195 | None:intergenic |
TCTGCAGCAGGTATGATTCT+AGG | 0.302879 | 4.2:-6943156 | None:intergenic |
TCTTCTTACTGGATTTGTTT+GGG | 0.306969 | 4.2:-6942918 | None:intergenic |
TTTGAAAATTATTATTGAAC+TGG | 0.307637 | 4.2:-6945522 | None:intergenic |
CAGGTTGCTAAGGGTGAATT+TGG | 0.310805 | 4.2:+6945118 | MS.gene72183:CDS |
CATTTCTCTTCCTCCTTGCT+TGG | 0.311996 | 4.2:-6937845 | None:intergenic |
TAGAATTTGTATGTATTTGA+TGG | 0.331318 | 4.2:-6937644 | None:intergenic |
TTTGCTATGCTCTAGGTTGC+AGG | 0.333766 | 4.2:+6938614 | MS.gene72183:intron |
CAGGTTGCTGAGGGTGAATT+TGG | 0.343581 | 4.2:+6944794 | MS.gene72183:CDS |
CTGTTCCTTGTGAACAGTTT+GGG | 0.344613 | 4.2:-6943835 | None:intergenic |
GGCTATGGGATCTGCATATA+AGG | 0.346775 | 4.2:+6936872 | MS.gene72183:CDS |
CTCCCATACAACTCATTGTT+TGG | 0.346932 | 4.2:-6944044 | None:intergenic |
CTCATTGATGACTGCTGCCC+TGG | 0.347569 | 4.2:-6945436 | None:intergenic |
CATTTCTCTCCGTCCTTGCT+TGG | 0.353432 | 4.2:-6937923 | None:intergenic |
GTTGATAATCCTCTTGATAA+TGG | 0.353757 | 4.2:+6943309 | MS.gene72183:CDS |
CGGTTGTCAAAGCGACTTGC+TGG | 0.356357 | 4.2:+6943597 | MS.gene72183:CDS |
AACATGATGAGGAATTTGTT+TGG | 0.357366 | 4.2:+6944350 | MS.gene72183:CDS |
AACTACTCTAGGCGCTGATA+TGG | 0.358663 | 4.2:+6942738 | MS.gene72183:CDS |
GGACGTTCGTCAGCTTTCTC+TGG | 0.359914 | 4.2:-6936795 | None:intergenic |
AACATAATGATGAGTTTGTT+TGG | 0.363290 | 4.2:+6944992 | MS.gene72183:CDS |
GATTCTCCATTGGTGAATTT+AGG | 0.366382 | 4.2:-6944212 | None:intergenic |
CCTTTGCATTCCACTACTCT+TGG | 0.366457 | 4.2:+6943232 | MS.gene72183:CDS |
CAACTCCGGGACAACCTTGC+AGG | 0.372248 | 4.2:-6945480 | None:intergenic |
TCTTGATATTGTCTTCTACT+TGG | 0.375662 | 4.2:-6940393 | None:intergenic |
ACGACATCTTGAAACTATAA+AGG | 0.384153 | 4.2:+6937685 | MS.gene72183:CDS |
TAGTCCTCAACACAGGTTCC+AGG | 0.387395 | 4.2:-6944907 | None:intergenic |
TCCACTTGTTTGTCTGCAGC+AGG | 0.389170 | 4.2:-6943168 | None:intergenic |
GGAGCATCTAACCATCTCTA+TGG | 0.392261 | 4.2:+6943717 | MS.gene72183:CDS |
GAAGTGGCATAAAGAAAGAT+TGG | 0.392292 | 4.2:+6938702 | MS.gene72183:CDS |
CAGCCATTAGGCAACCATTC+AGG | 0.393639 | 4.2:-6936816 | None:intergenic |
AGCATAATGAGAAATTTGTT+TGG | 0.395674 | 4.2:+6944668 | MS.gene72183:CDS |
GCTGTTCCTTGTGAACAGTT+TGG | 0.397453 | 4.2:-6943836 | None:intergenic |
CTTACTGGATTTGTTTGGGT+TGG | 0.400869 | 4.2:-6942914 | None:intergenic |
GAGGAAAATTTAGCAGTTCA+AGG | 0.403757 | 4.2:+6945286 | MS.gene72183:CDS |
GTCATTGTCAATCCGTTTGT+TGG | 0.404392 | 4.2:-6936638 | None:intergenic |
AGAGCCCGGCATTCCTTGTC+GGG | 0.413690 | 4.2:+6942942 | MS.gene72183:CDS |
CATAGCCGGACCACTTTGTC+GGG | 0.414376 | 4.2:-6936856 | None:intergenic |
TTCCTTGAGTTGTTAACATC+GGG | 0.419585 | 4.2:-6942493 | None:intergenic |
CCTCCTTGCTTGGAGAATGC+TGG | 0.422992 | 4.2:-6937835 | None:intergenic |
TGGTCTGTAAGCTTGGTAAC+TGG | 0.423826 | 4.2:-6943090 | None:intergenic |
CCTCCATCATGACAGTTAAC+AGG | 0.423982 | 4.2:-6945322 | None:intergenic |
CATGACAGTTAACAGGTTCC+TGG | 0.424130 | 4.2:-6945315 | None:intergenic |
GGCAATTCTAAGCTTTCAAC+TGG | 0.426691 | 4.2:-6942472 | None:intergenic |
AGGCAACAACATAAGGAATC+TGG | 0.427206 | 4.2:+6944571 | MS.gene72183:CDS |
TTCTAGAATGATGCAGAAGT+TGG | 0.427230 | 4.2:-6944406 | None:intergenic |
TTCTAGAATGATGCAGAAGT+TGG | 0.427230 | 4.2:-6945048 | None:intergenic |
CCGACAAAGTGGTCCGGCTA+TGG | 0.429215 | 4.2:+6936857 | MS.gene72183:CDS |
TGTCTCTTGGCAGCAGGTGA+TGG | 0.429849 | 4.2:-6942275 | None:intergenic |
AAACTGGAAGATCCAAAATC+TGG | 0.430033 | 4.2:-6945364 | None:intergenic |
AAGCAACATGATAAGGAATC+TGG | 0.432570 | 4.2:+6944247 | MS.gene72183:CDS |
TCAATTTCAGGGACTGTAGA+AGG | 0.434912 | 4.2:-6943333 | None:intergenic |
TCAGAGCTCACCTTACCATT+TGG | 0.436408 | 4.2:+6943906 | MS.gene72183:CDS |
TGCATGGGTGTAGACTGCTT+TGG | 0.439557 | 4.2:-6942302 | None:intergenic |
TGGAGAATGCTGCTTACTCT+TGG | 0.441902 | 4.2:-6937780 | None:intergenic |
CAGTCTTCAAAGATACTGCT+TGG | 0.444071 | 4.2:+6944146 | MS.gene72183:CDS |
TTCTAGAACGATGCAGAAGT+TGG | 0.445545 | 4.2:-6944724 | None:intergenic |
GAGTCTTGAATGCAAATTCC+AGG | 0.448695 | 4.2:-6943950 | None:intergenic |
GTCGCGAAAGCAACATGATA+AGG | 0.452779 | 4.2:+6944240 | MS.gene72183:CDS |
GGTACATCGGAGCAGCCTCC+AGG | 0.452859 | 4.2:+6944815 | MS.gene72183:CDS |
CGTCCTGAATGGTTGCCTAA+TGG | 0.454991 | 4.2:+6936813 | MS.gene72183:CDS |
TTGCTTGTGTCCATTGCGTT+TGG | 0.456520 | 4.2:-6942808 | None:intergenic |
CTGAATGGTTGCCTAATGGC+TGG | 0.462074 | 4.2:+6936817 | MS.gene72183:CDS |
TCAAGATGTCGTAATACCTC+AGG | 0.462437 | 4.2:-6937674 | None:intergenic |
TTGATTGCATAATCCAAGCT+TGG | 0.463182 | 4.2:-6943261 | None:intergenic |
TTTACTTCTTTAATCCATCC+AGG | 0.463808 | 4.2:-6938665 | None:intergenic |
ATGGTTGCTCTTGATACCTC+AGG | 0.466320 | 4.2:+6942547 | MS.gene72183:CDS |
CCATAGCCGGACCACTTTGT+CGG | 0.466321 | 4.2:-6936857 | None:intergenic |
TTTAACGTTACAGTTTGAAA+TGG | 0.469195 | 4.2:-6945160 | None:intergenic |
TTGAGGACTAGCTCCCCATC+TGG | 0.469895 | 4.2:+6944920 | MS.gene72183:CDS |
CTCTTGGTCTGACCCAAGCT+TGG | 0.470998 | 4.2:+6943248 | MS.gene72183:CDS |
TGATGACTGCTGCCCTGGCA+TGG | 0.471120 | 4.2:-6945431 | None:intergenic |
TGATTGCATAATCCAAGCTT+GGG | 0.471659 | 4.2:-6943260 | None:intergenic |
ATAGAGGTGCACACATTGCT+TGG | 0.473914 | 4.2:-6937962 | None:intergenic |
GTCATGAAGGCAACAACATA+AGG | 0.474479 | 4.2:+6944564 | MS.gene72183:CDS |
GCGACTTGCTGGCATTGAAC+CGG | 0.474851 | 4.2:+6943608 | MS.gene72183:CDS |
CCTTACCATTTGGTGAATCC+TGG | 0.476635 | 4.2:+6943916 | MS.gene72183:CDS |
ATGTCGTAATACCTCAGGTT+TGG | 0.478015 | 4.2:-6937669 | None:intergenic |
ACTTCGATATCCCAGCCATT+AGG | 0.479281 | 4.2:-6936828 | None:intergenic |
TTTCCCGACTCTCTATGTAA+TGG | 0.484000 | 4.2:-6943117 | None:intergenic |
ACAGGAGGGAAGTCCATGCC+AGG | 0.484013 | 4.2:+6945418 | MS.gene72183:CDS |
CCTGCATTTGACACTGTCAC+TGG | 0.484079 | 4.2:+6943366 | MS.gene72183:CDS |
TTGAGGACTAGCTCCACATC+TGG | 0.485220 | 4.2:+6944602 | MS.gene72183:CDS |
CTGCCAAACAATGAGTTGTA+TGG | 0.485882 | 4.2:+6944041 | MS.gene72183:CDS |
TTATCAGAAGGGCTTGCCTC+CGG | 0.488208 | 4.2:-6943627 | None:intergenic |
TGCTCTTCCAATAAGAAGAA+AGG | 0.488441 | 4.2:+6937716 | MS.gene72183:CDS |
CCAGTGACAGTGTCAAATGC+AGG | 0.489768 | 4.2:-6943366 | None:intergenic |
CTGAGCCTGCAAGGTTGTCC+CGG | 0.491049 | 4.2:+6945475 | MS.gene72183:CDS |
TGGTACATTGGATCAACCAC+CGG | 0.497117 | 4.2:+6944496 | MS.gene72183:CDS |
CGGGCTTCAAAACGACTGGC+TGG | 0.498052 | 4.2:+6942961 | MS.gene72183:CDS |
AAGAAAGAGCGTAATATGAA+TGG | 0.498524 | 4.2:+6944122 | MS.gene72183:CDS |
GGATATGGAGTTCATCAGCC+TGG | 0.500596 | 4.2:-6942992 | None:intergenic |
TTCTCATTTCACTTTGACAC+AGG | 0.502289 | 4.2:+6945400 | MS.gene72183:CDS |
TGTTCACAAGGAACAGCAAT+CGG | 0.502711 | 4.2:+6943842 | MS.gene72183:CDS |
TTGTTGTTGCGGATCAACTC+CGG | 0.506435 | 4.2:-6945494 | None:intergenic |
AAGAGCCCGGCATTCCTTGT+CGG | 0.506505 | 4.2:+6942941 | MS.gene72183:CDS |
CGACAAAGTGGTCCGGCTAT+GGG | 0.508093 | 4.2:+6936858 | MS.gene72183:CDS |
TAAATCATCTCAGCATTTCA+AGG | 0.509593 | 4.2:+6942765 | MS.gene72183:CDS |
TGTTGTTGCGGATCAACTCC+GGG | 0.511033 | 4.2:-6945493 | None:intergenic |
TCTAGAATGATGCAGAAGTT+GGG | 0.511069 | 4.2:-6944405 | None:intergenic |
TCTAGAATGATGCAGAAGTT+GGG | 0.511069 | 4.2:-6945047 | None:intergenic |
TCTAGAACGATGCAGAAGTT+GGG | 0.512660 | 4.2:-6944723 | None:intergenic |
AAGTGGCATAAAGAAAGATT+GGG | 0.512803 | 4.2:+6938703 | MS.gene72183:CDS |
TTGTCGGGCTTCAAAACGAC+TGG | 0.513780 | 4.2:+6942957 | MS.gene72183:CDS |
GTTGTACATCCTTCTTGGAA+TGG | 0.513958 | 4.2:-6940329 | None:intergenic |
AACTCAGCAGAAGAATCAAC+CGG | 0.514125 | 4.2:-6943987 | None:intergenic |
TTATCAAGAGGATTATCAAC+TGG | 0.514593 | 4.2:-6943306 | None:intergenic |
TTTGCATTCAAGACTCTCAC+TGG | 0.514930 | 4.2:+6943957 | MS.gene72183:CDS |
TTGAAAATTATTATTGAACT+GGG | 0.516712 | 4.2:-6945521 | None:intergenic |
GGAAAATTTAGCAGTTCAAG+GGG | 0.517942 | 4.2:+6945288 | MS.gene72183:CDS |
TTCCCATCTCTGAGCCTGCA+AGG | 0.518273 | 4.2:+6945466 | MS.gene72183:CDS |
GGATTAAAGAAGTAAAGATT+CGG | 0.519086 | 4.2:+6938672 | MS.gene72183:CDS |
CATCTAACCATCTCTATGGT+GGG | 0.520294 | 4.2:+6943721 | MS.gene72183:CDS |
AAAATCCAAGAGAAAGAAAG+AGG | 0.520443 | 4.2:+6943560 | MS.gene72183:CDS |
GAAGCCCGACAAGGAATGCC+GGG | 0.521380 | 4.2:-6942946 | None:intergenic |
TTAAATGCAAATTCTAAGCA+TGG | 0.525992 | 4.2:-6945238 | None:intergenic |
TGAAGCCCGACAAGGAATGC+CGG | 0.527174 | 4.2:-6942947 | None:intergenic |
AGGCAACAACATGAGGAACC+TGG | 0.528981 | 4.2:+6944889 | MS.gene72183:CDS |
ACATTGTCAACCAACTTGAC+AGG | 0.528995 | 4.2:-6942664 | None:intergenic |
TCAGTTTCATGGACGGTAGC+GGG | 0.529051 | 4.2:-6943429 | None:intergenic |
TCTGACCAGGATTCACCAAA+TGG | 0.530338 | 4.2:-6943921 | None:intergenic |
CAACCTTGCAGGCTCAGAGA+TGG | 0.530486 | 4.2:-6945469 | None:intergenic |
TTTCCTTGAGTTGTTAACAT+CGG | 0.530800 | 4.2:-6942494 | None:intergenic |
GCACCATTACATAGAGAGTC+GGG | 0.531421 | 4.2:+6943114 | MS.gene72183:CDS |
TGCCCGATGTTAACAACTCA+AGG | 0.533016 | 4.2:+6942491 | MS.gene72183:CDS |
GGAGAATCTCTTAGTCATGA+AGG | 0.533330 | 4.2:+6944869 | MS.gene72183:CDS |
CAAATTCACCCTTAGCAACC+TGG | 0.533831 | 4.2:-6945117 | None:intergenic |
AGTCTTCAAAGATACTGCTT+GGG | 0.534640 | 4.2:+6944147 | MS.gene72183:CDS |
CTAAACATATTAGTAATGAT+AGG | 0.535909 | 4.2:+6943877 | MS.gene72183:CDS |
TACAAGATTCTCTGTTGCCA+TGG | 0.536293 | 4.2:-6944541 | None:intergenic |
AACCTTGCAGGCTCAGAGAT+GGG | 0.537883 | 4.2:-6945468 | None:intergenic |
TACTCAAGAGCTTTATCAGA+AGG | 0.538192 | 4.2:-6943639 | None:intergenic |
ACTTGGTTTAATGGCACACT+TGG | 0.538980 | 4.2:-6940376 | None:intergenic |
AGACGCATGACGAGTAAGCT+TGG | 0.540487 | 4.2:-6943751 | None:intergenic |
AGGAAAATTTAGCAGTTCAA+GGG | 0.541169 | 4.2:+6945287 | MS.gene72183:CDS |
AGAGAATCTTGTAGTCATGA+AGG | 0.541432 | 4.2:+6944551 | MS.gene72183:CDS |
ATGTTAACAACTCAAGGAAA+GGG | 0.541575 | 4.2:+6942497 | MS.gene72183:CDS |
ATCAGTTTCATGGACGGTAG+CGG | 0.547328 | 4.2:-6943430 | None:intergenic |
TCCAGTAAGAAGAAAGAGCC+CGG | 0.547845 | 4.2:+6942928 | MS.gene72183:CDS |
TGCCAAACAATGAGTTGTAT+GGG | 0.548403 | 4.2:+6944042 | MS.gene72183:CDS |
GACTGGCTGGATCTGAACCC+AGG | 0.548529 | 4.2:+6942974 | MS.gene72183:CDS |
TGGAATACATATCCACTCAC+TGG | 0.551219 | 4.2:-6940309 | None:intergenic |
GAACCTGTTAACTGTCATGA+TGG | 0.554557 | 4.2:+6945319 | MS.gene72183:CDS |
AACTGGGAATATTGTTGTTG+CGG | 0.554594 | 4.2:-6945505 | None:intergenic |
GTTAAAAGTACAGTTGCAGT+GGG | 0.555405 | 4.2:-6943690 | None:intergenic |
CTGTTAACTGTCATGATGGA+GGG | 0.557709 | 4.2:+6945323 | MS.gene72183:CDS |
GAAACTAAAACGTTAAACAA+TGG | 0.559589 | 4.2:+6944842 | MS.gene72183:CDS |
AAGCTGACGAACGTCCTGAA+TGG | 0.559865 | 4.2:+6936802 | MS.gene72183:CDS |
AATCTGGAGGAACCAACAAA+CGG | 0.560339 | 4.2:+6936626 | MS.gene72183:CDS |
TAAATGCAAATTCTAAGCAT+GGG | 0.560755 | 4.2:-6945237 | None:intergenic |
AAATGACCAGGTTGCTGAGG+GGG | 0.562559 | 4.2:+6944469 | MS.gene72183:CDS |
AACGTTACAGTTTGAAATGG+CGG | 0.562874 | 4.2:-6945157 | None:intergenic |
CCAGGATTCACCAAATGGTA+AGG | 0.563925 | 4.2:-6943916 | None:intergenic |
AGCTGAATTGCAACTAAGTG+AGG | 0.565303 | 4.2:+6943062 | MS.gene72183:CDS |
TGAATGGTTGCCTAATGGCT+GGG | 0.565873 | 4.2:+6936818 | MS.gene72183:CDS |
AAAGTTTCGACTCCTAGTGT+TGG | 0.568857 | 4.2:+6944014 | MS.gene72183:CDS |
TCATTTCACTTTGACACAGG+AGG | 0.569150 | 4.2:+6945403 | MS.gene72183:CDS |
GATGTTAACAACTCAAGGAA+AGG | 0.569567 | 4.2:+6942496 | MS.gene72183:CDS |
TAGAACCCGACAAAGTGGTC+CGG | 0.570129 | 4.2:+6936851 | MS.gene72183:CDS |
TTGAATGCAAATTCCAGGCA+TGG | 0.570598 | 4.2:-6943945 | None:intergenic |
TAACATGCATTCTCCAAACA+AGG | 0.572397 | 4.2:+6937871 | MS.gene72183:CDS |
TGGAGGATCTACCACCTGGA+TGG | 0.573332 | 4.2:+6938651 | MS.gene72183:CDS |
AGTCGCTTTGACAACCGCAT+AGG | 0.573354 | 4.2:-6943591 | None:intergenic |
TTTCTTCCCCACCATAGAGA+TGG | 0.573652 | 4.2:-6943728 | None:intergenic |
ATCCTGGTCAGATCCATGCC+TGG | 0.574579 | 4.2:+6943932 | MS.gene72183:CDS |
GTCGCTTTGACAACCGCATA+GGG | 0.575031 | 4.2:-6943590 | None:intergenic |
AATGTGTCTAAATTAGCCAC+TGG | 0.575361 | 4.2:+6944947 | MS.gene72183:CDS |
AACTGTCATGATGGAGGGGA+TGG | 0.576525 | 4.2:+6945328 | MS.gene72183:CDS |
AGTTAAAAGTACAGTTGCAG+TGG | 0.577236 | 4.2:-6943691 | None:intergenic |
TTCCAGGCATGGATCTGACC+AGG | 0.578611 | 4.2:-6943934 | None:intergenic |
GCATCTAACCATCTCTATGG+TGG | 0.578703 | 4.2:+6943720 | MS.gene72183:CDS |
GGTACATTGGATCAACCACC+GGG | 0.579078 | 4.2:+6944497 | MS.gene72183:CDS |
TTGAGGTCTAGCTCCACACC+TGG | 0.579298 | 4.2:+6944278 | MS.gene72183:CDS |
TTTGGCAGTTCACCAACACT+AGG | 0.580095 | 4.2:-6944026 | None:intergenic |
GAATTGCAACTAAGTGAGGG+TGG | 0.580593 | 4.2:+6943066 | MS.gene72183:CDS |
TTGAATATCAGTTTCATGGA+CGG | 0.582377 | 4.2:-6943436 | None:intergenic |
CATTTCACTTTGACACAGGA+GGG | 0.582652 | 4.2:+6945404 | MS.gene72183:CDS |
TACGCTTTAGTTTCAAAACC+CGG | 0.583891 | 4.2:-6944515 | None:intergenic |
TGCACCATTACATAGAGAGT+CGG | 0.584390 | 4.2:+6943113 | MS.gene72183:CDS |
TATGCAATCAATACCCTCAC+GGG | 0.584830 | 4.2:+6943273 | MS.gene72183:CDS |
TGCTTGGGCAACCTGAGTTG+AGG | 0.584991 | 4.2:+6944162 | MS.gene72183:CDS |
TGGTGCATGGTCTGTAAGCT+TGG | 0.585017 | 4.2:-6943097 | None:intergenic |
TACAGGTGTGATTCCAGTAG+AGG | 0.585100 | 4.2:+6945267 | MS.gene72183:CDS |
ACCTGCTGCAGACAAACAAG+TGG | 0.588791 | 4.2:+6943167 | MS.gene72183:CDS |
ATTGTGGAGGATCTACCACC+TGG | 0.589100 | 4.2:+6938647 | MS.gene72183:CDS |
ACTCTCTATGTAATGGTGCA+TGG | 0.590005 | 4.2:-6943110 | None:intergenic |
ACTCAAGAGCTTTATCAGAA+GGG | 0.590425 | 4.2:-6943638 | None:intergenic |
TTATGCAATCAATACCCTCA+CGG | 0.592881 | 4.2:+6943272 | MS.gene72183:CDS |
ATGATGTCAATGTGAGCCAT+CGG | 0.593372 | 4.2:+6942614 | MS.gene72183:CDS |
TGGTTGCTCTTGATACCTCA+GGG | 0.594405 | 4.2:+6942548 | MS.gene72183:CDS |
ATCTAACCATCTCTATGGTG+GGG | 0.594533 | 4.2:+6943722 | MS.gene72183:CDS |
TAACCAGCATTCTCCAAGCA+AGG | 0.595724 | 4.2:+6937832 | MS.gene72183:CDS |
AAAACGTTAAACAATGGCAA+TGG | 0.596651 | 4.2:+6944848 | MS.gene72183:CDS |
GCGACTATGAGATTCTCCAT+TGG | 0.596695 | 4.2:-6944222 | None:intergenic |
GATATGGAGTTCATCAGCCT+GGG | 0.597149 | 4.2:-6942991 | None:intergenic |
AAATCATCTCAGCATTTCAA+GGG | 0.598277 | 4.2:+6942766 | MS.gene72183:CDS |
GCATTCTCCAAACAAGGAGG+AGG | 0.599562 | 4.2:+6937748 | MS.gene72183:CDS |
TGCAGGCTCAGAGATGGGAA+TGG | 0.600438 | 4.2:-6945463 | None:intergenic |
TTATCTCTTTCTAGTTGACG+TGG | 0.601270 | 4.2:-6942862 | None:intergenic |
AATATGCCTAAATTCACCAA+TGG | 0.602518 | 4.2:+6944206 | MS.gene72183:CDS |
ACTTGCTGGCATTGAACCGG+AGG | 0.603999 | 4.2:+6943611 | MS.gene72183:CDS |
CCTGTTAACTGTCATGATGG+AGG | 0.606160 | 4.2:+6945322 | MS.gene72183:CDS |
GAAACTAAAGCGTATAACCA+TGG | 0.606590 | 4.2:+6944524 | MS.gene72183:CDS |
GAATGTGCCATCTCGAATGA+TGG | 0.609217 | 4.2:+6942528 | MS.gene72183:CDS |
CTTCCAAATGTAAAAGCACA+AGG | 0.609245 | 4.2:+6943025 | MS.gene72183:CDS |
ATGATTATGAGATTCTCGAA+TGG | 0.609264 | 4.2:-6944639 | None:intergenic |
TAAGCAGCATTCTCCAAGCA+AGG | 0.610399 | 4.2:+6937787 | MS.gene72183:CDS |
AACATGCATTCTCCAAACAA+GGG | 0.610756 | 4.2:+6937872 | MS.gene72183:CDS |
CCAGTCTCCGTGAAAACCGA+TGG | 0.611124 | 4.2:-6942630 | None:intergenic |
CAGCATGCATTCTCCAAGCA+AGG | 0.612883 | 4.2:+6937910 | MS.gene72183:CDS |
TGGTGTTGAACCTGTCAAGT+TGG | 0.614025 | 4.2:+6942654 | MS.gene72183:CDS |
GTTACAGTTTGAAATGGCGG+TGG | 0.614827 | 4.2:-6945154 | None:intergenic |
GAAGTTAGAACCCGACAAAG+TGG | 0.615611 | 4.2:+6936846 | MS.gene72183:CDS |
AGGCGAGAATTCCATTGTGG+AGG | 0.616015 | 4.2:+6938634 | MS.gene72183:CDS |
TTATATGCAGATCCCATAGC+CGG | 0.616036 | 4.2:-6936870 | None:intergenic |
GGAATCTGGAACCTGTGTTG+AGG | 0.619326 | 4.2:+6944585 | MS.gene72183:CDS |
AGTTTGAAAGCAGAAGTGCT+AGG | 0.621435 | 4.2:+6943777 | MS.gene72183:CDS |
ATCATGAAGAGAACATGATG+AGG | 0.621582 | 4.2:+6944339 | MS.gene72183:CDS |
TAAGGGTGAATTTGGTACAT+CGG | 0.622183 | 4.2:+6945126 | MS.gene72183:CDS |
TGAGGGTGAATTTGGTACAT+CGG | 0.622460 | 4.2:+6944802 | MS.gene72183:CDS |
GGAGAATCATCAAGAAAGTG+TGG | 0.623687 | 4.2:+6943798 | MS.gene72183:CDS |
TGGTGGTAACACACCCGTGA+GGG | 0.625772 | 4.2:-6943286 | None:intergenic |
GGAATCTGGAACCTGTGTTG+AGG | 0.626333 | 4.2:+6944261 | MS.gene72183:CDS |
AATCGAGCAACCAAACGCAA+TGG | 0.628532 | 4.2:+6942798 | MS.gene72183:CDS |
AAGATTCGGAAGCACAGAAG+TGG | 0.628849 | 4.2:+6938686 | MS.gene72183:CDS |
AAGGAGCTAGTCCTCAACTC+AGG | 0.630553 | 4.2:-6944173 | None:intergenic |
TAGCAAGCATTCTCCAAACA+AGG | 0.631214 | 4.2:+6937742 | MS.gene72183:CDS |
TTGTTTGACAACGTTACTAG+AGG | 0.631495 | 4.2:+6943465 | MS.gene72183:CDS |
TGGGAGAGTGACAACCAGCA+TGG | 0.632248 | 4.2:+6944061 | MS.gene72183:CDS |
AGAGCAACCATCATTCGAGA+TGG | 0.634631 | 4.2:-6942535 | None:intergenic |
TGACAATGTGATTAATGATG+AGG | 0.636184 | 4.2:+6942678 | MS.gene72183:CDS |
TGCAGGCGAGAATTCCATTG+TGG | 0.639433 | 4.2:+6938631 | MS.gene72183:CDS |
ACATGCATTCTCCAAACAAG+GGG | 0.641967 | 4.2:+6937873 | MS.gene72183:CDS |
GTCATGAAGGCAACAACATG+AGG | 0.643679 | 4.2:+6944882 | MS.gene72183:CDS |
TGATACCCAAACTGTTCACA+AGG | 0.643981 | 4.2:+6943830 | MS.gene72183:CDS |
ATGCATTCTCCAAGCAAGGA+CGG | 0.644558 | 4.2:+6937914 | MS.gene72183:CDS |
AATTGCAACTAAGTGAGGGT+GGG | 0.644736 | 4.2:+6943067 | MS.gene72183:CDS |
ACTGCAACTCAGTATTGTCG+TGG | 0.650157 | 4.2:-6945183 | None:intergenic |
GTAGAAGGTCCATTATCAAG+AGG | 0.650449 | 4.2:-6943318 | None:intergenic |
TCAAGAGGATTATCAACTGG+TGG | 0.652934 | 4.2:-6943303 | None:intergenic |
GCTGAATTGCAACTAAGTGA+GGG | 0.654401 | 4.2:+6943063 | MS.gene72183:CDS |
GGAACCTGGAACCTGTGTTG+AGG | 0.657171 | 4.2:+6944903 | MS.gene72183:CDS |
ATATGTATTCCATTCCAAGA+AGG | 0.660953 | 4.2:+6940320 | MS.gene72183:CDS |
AGGTGGTAGATCCTCCACAA+TGG | 0.665682 | 4.2:-6938645 | None:intergenic |
TTGGGTCAGACCAAGAGTAG+TGG | 0.666010 | 4.2:-6943242 | None:intergenic |
TGTTAACTGTCATGATGGAG+GGG | 0.666653 | 4.2:+6945324 | MS.gene72183:CDS |
CAGGAGGGAAGTCCATGCCA+GGG | 0.676123 | 4.2:+6945419 | MS.gene72183:CDS |
CCAAGAGTAGTGGAATGCAA+AGG | 0.680360 | 4.2:-6943232 | None:intergenic |
GTGACTATGAAATTCTCCAG+TGG | 0.680600 | 4.2:-6944963 | None:intergenic |
GTGGAGCTAGTCCTCAACAC+AGG | 0.684626 | 4.2:-6944596 | None:intergenic |
GGGGAGCTAGTCCTCAACAC+AGG | 0.684626 | 4.2:-6944914 | None:intergenic |
TGGAATGCAAAGGACAGTTG+AGG | 0.692734 | 4.2:-6943222 | None:intergenic |
ATGATTGTGAGATTCTTGAG+TGG | 0.696127 | 4.2:-6944321 | None:intergenic |
CTGGTGGTAACACACCCGTG+AGG | 0.700134 | 4.2:-6943287 | None:intergenic |
GCAGCATTCTCCAAGCAAGG+AGG | 0.711520 | 4.2:+6937790 | MS.gene72183:CDS |
CCAGCATTCTCCAAGCAAGG+AGG | 0.712170 | 4.2:+6937835 | MS.gene72183:CDS |
CAAATTCTACTCCAAACCTG+AGG | 0.713388 | 4.2:+6937658 | MS.gene72183:CDS |
GTGGAGCTAGACCTCAACAC+AGG | 0.721025 | 4.2:-6944272 | None:intergenic |
ACTTCTTTAATCCATCCAGG+TGG | 0.722254 | 4.2:-6938662 | None:intergenic |
CAAGCATTCTCCAAACAAGG+AGG | 0.726483 | 4.2:+6937745 | MS.gene72183:CDS |
GGTTGCTCTTGATACCTCAG+GGG | 0.734372 | 4.2:+6942549 | MS.gene72183:CDS |
GAAAATTTAGCAGTTCAAGG+GGG | 0.735832 | 4.2:+6945289 | MS.gene72183:CDS |
AAGAGGTCAAAGTCCCTATG+CGG | 0.737397 | 4.2:+6943577 | MS.gene72183:CDS |
GCTTTAGTTTCAAAACCCGG+TGG | 0.754863 | 4.2:-6944512 | None:intergenic |
AAAATGACCAGGTTGCTGAG+GGG | 0.756061 | 4.2:+6944468 | MS.gene72183:CDS |
CATGCATTCTCCAAACAAGG+GGG | 0.763333 | 4.2:+6937874 | MS.gene72183:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 6936604 | 6945552 | 6936604 | ID=MS.gene72183 |
chr4.2 | mRNA | 6936604 | 6945552 | 6936604 | ID=MS.gene72183.t1;Parent=MS.gene72183 |
chr4.2 | exon | 6936604 | 6936684 | 6936604 | ID=MS.gene72183.t1.exon1;Parent=MS.gene72183.t1 |
chr4.2 | CDS | 6936604 | 6936684 | 6936604 | ID=cds.MS.gene72183.t1;Parent=MS.gene72183.t1 |
chr4.2 | exon | 6936792 | 6936893 | 6936792 | ID=MS.gene72183.t1.exon2;Parent=MS.gene72183.t1 |
chr4.2 | CDS | 6936792 | 6936893 | 6936792 | ID=cds.MS.gene72183.t1;Parent=MS.gene72183.t1 |
chr4.2 | exon | 6937632 | 6937970 | 6937632 | ID=MS.gene72183.t1.exon3;Parent=MS.gene72183.t1 |
chr4.2 | CDS | 6937632 | 6937970 | 6937632 | ID=cds.MS.gene72183.t1;Parent=MS.gene72183.t1 |
chr4.2 | exon | 6938629 | 6938724 | 6938629 | ID=MS.gene72183.t1.exon4;Parent=MS.gene72183.t1 |
chr4.2 | CDS | 6938629 | 6938724 | 6938629 | ID=cds.MS.gene72183.t1;Parent=MS.gene72183.t1 |
chr4.2 | exon | 6940297 | 6940431 | 6940297 | ID=MS.gene72183.t1.exon5;Parent=MS.gene72183.t1 |
chr4.2 | CDS | 6940297 | 6940431 | 6940297 | ID=cds.MS.gene72183.t1;Parent=MS.gene72183.t1 |
chr4.2 | exon | 6942275 | 6942338 | 6942275 | ID=MS.gene72183.t1.exon6;Parent=MS.gene72183.t1 |
chr4.2 | CDS | 6942275 | 6942338 | 6942275 | ID=cds.MS.gene72183.t1;Parent=MS.gene72183.t1 |
chr4.2 | exon | 6942464 | 6945552 | 6942464 | ID=MS.gene72183.t1.exon7;Parent=MS.gene72183.t1 |
chr4.2 | CDS | 6942464 | 6945552 | 6942464 | ID=cds.MS.gene72183.t1;Parent=MS.gene72183.t1 |
Gene Sequence |
Protein sequence |