Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73425.t1 | XP_013470142.1 | 97.6 | 836 | 20 | 0 | 1 | 836 | 1 | 836 | 0.00E+00 | 1689.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73425.t1 | F4I1S7 | 65.1 | 839 | 271 | 12 | 7 | 833 | 7 | 835 | 0.0e+00 | 1114.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73425.t1 | A0A072W1L5 | 97.6 | 836 | 20 | 0 | 1 | 836 | 1 | 836 | 0.0e+00 | 1689.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene73425 | 0.816234 | 6.14E-52 | -1.69E-46 |
| MS.gene056228 | MS.gene73425 | 0.80745 | 5.02E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73425.t1 | MTR_1g109490 | 97.608 | 836 | 20 | 0 | 1 | 836 | 1 | 836 | 0.0 | 1687 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73425.t1 | AT1G49540 | 65.077 | 839 | 271 | 12 | 7 | 833 | 7 | 835 | 0.0 | 1108 |
| MS.gene73425.t1 | AT1G49540 | 65.042 | 841 | 270 | 13 | 7 | 833 | 7 | 837 | 0.0 | 1105 |
Find 224 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGACAAACATCCAGATTT+TGG | 0.080849 | 1.4:-83840786 | MS.gene73425:CDS |
| CAGATGGTACTGTTTGTATA+TGG | 0.208305 | 1.4:-83842922 | MS.gene73425:CDS |
| ACCTCTCCATTGATGCTTAC+AGG | 0.211910 | 1.4:+83842437 | None:intergenic |
| TACATGTATTGATGGAATTA+TGG | 0.212375 | 1.4:-83842981 | MS.gene73425:CDS |
| AACTAACCTTGGGCATAAAT+AGG | 0.234409 | 1.4:+83840728 | None:intergenic |
| AAGACAAATGCATACGAATT+TGG | 0.242871 | 1.4:-83842385 | MS.gene73425:CDS |
| GAACTGCATTATTTGCTATC+TGG | 0.268434 | 1.4:-83843197 | MS.gene73425:CDS |
| ATGGTGGATCGTTCCATCTT+TGG | 0.278484 | 1.4:-83841971 | MS.gene73425:CDS |
| CTGATGGTGCTATTATTCTA+TGG | 0.290612 | 1.4:-83843169 | MS.gene73425:CDS |
| GTACATTCATGTGAGCTAAA+AGG | 0.291991 | 1.4:-83842497 | MS.gene73425:CDS |
| GCTAAAATTGAATCTCCATT+TGG | 0.295581 | 1.4:+83842002 | None:intergenic |
| ACAGACTCCACAACTCTATT+TGG | 0.297076 | 1.4:+83837982 | None:intergenic |
| TCCAATCAAAAGAGATTCTA+AGG | 0.303182 | 1.4:+83842241 | None:intergenic |
| CCATAGAGTTTATGTGATTC+AGG | 0.311737 | 1.4:+83839387 | None:intergenic |
| TACAGATTGGATCCGGAGTT+TGG | 0.311793 | 1.4:-83842471 | MS.gene73425:CDS |
| TCCATCCTCTTGTCTGTTAT+AGG | 0.312730 | 1.4:+83837959 | None:intergenic |
| AACGTTTCTTGGGGTGCTTC+TGG | 0.315004 | 1.4:-83843668 | MS.gene73425:CDS |
| TTCTTTATGCTGTGATCATA+AGG | 0.318251 | 1.4:-83839346 | MS.gene73425:CDS |
| ACATATTTGCACCCAAAATC+TGG | 0.321358 | 1.4:+83840774 | None:intergenic |
| GGATTATCTGGTCATGTTCT+TGG | 0.328711 | 1.4:-83838199 | MS.gene73425:CDS |
| TTCCGTTGGTTCTAAATCTA+TGG | 0.332083 | 1.4:-83842745 | MS.gene73425:CDS |
| CACTGTGCTCTGGGATTCTA+TGG | 0.332419 | 1.4:-83842038 | MS.gene73425:CDS |
| GCGACAAGACAGTGAAAATC+TGG | 0.332615 | 1.4:-83838142 | MS.gene73425:CDS |
| AATGCTTTGTGGTTGATAAC+AGG | 0.332640 | 1.4:+83842154 | None:intergenic |
| AATAGTGAACAACGTTTCTT+GGG | 0.344542 | 1.4:-83843678 | MS.gene73425:CDS |
| TGGCGACAAAGATACCTTTC+CGG | 0.344773 | 1.4:+83842623 | None:intergenic |
| GAATAGTGAACAACGTTTCT+TGG | 0.352990 | 1.4:-83843679 | MS.gene73425:CDS |
| GTAGAGGCATGACATATAAA+AGG | 0.354208 | 1.4:+83837888 | None:intergenic |
| TGTATACACAGCAAAAGAAT+TGG | 0.356030 | 1.4:-83843219 | MS.gene73425:intron |
| ACATGAGGATTGGGTATATT+CGG | 0.356150 | 1.4:-83842219 | MS.gene73425:CDS |
| GGCTTTGGCAGGTTGGTTCA+TGG | 0.357324 | 1.4:-83838972 | MS.gene73425:CDS |
| GCTGTCACACTACTCGTAAA+TGG | 0.364831 | 1.4:+83838071 | None:intergenic |
| AGTAACCTTGGGGTTGAAAA+TGG | 0.365919 | 1.4:+83843613 | None:intergenic |
| TGGCAGCCTGAAAAGACTTC+TGG | 0.377252 | 1.4:-83842098 | MS.gene73425:CDS |
| CCTGAATCACATAAACTCTA+TGG | 0.383126 | 1.4:-83839387 | MS.gene73425:CDS |
| GTGAACCTGTTGCAAATTCA+TGG | 0.386968 | 1.4:+83838165 | None:intergenic |
| GCTTGTTGCTTCTTCATGTA+AGG | 0.391628 | 1.4:-83839319 | MS.gene73425:intron |
| ATTCCATCATTTCTTCGATC+GGG | 0.391862 | 1.4:+83838029 | None:intergenic |
| CTACTGCTGTGGCAGAAGTA+TGG | 0.394606 | 1.4:-83838993 | MS.gene73425:CDS |
| TATGACAGTTGTTCATAGTA+AGG | 0.395282 | 1.4:-83840930 | MS.gene73425:CDS |
| CTAAAATTGAATCTCCATTT+GGG | 0.396876 | 1.4:+83842003 | None:intergenic |
| AAGAAGGAGTTGAAGTGAAA+AGG | 0.398466 | 1.4:-83843727 | MS.gene73425:CDS |
| CGAACTAAGCCACTGTGCTC+TGG | 0.400762 | 1.4:-83842048 | MS.gene73425:CDS |
| TTCTGCCACAGCAGTAGATT+GGG | 0.401219 | 1.4:+83838999 | None:intergenic |
| TTGAATAGAAATTTGCTACT+TGG | 0.403781 | 1.4:+83843460 | None:intergenic |
| TACATTCATGTGAGCTAAAA+GGG | 0.406622 | 1.4:-83842496 | MS.gene73425:CDS |
| ACCTCCAATTGAAGATCAAC+TGG | 0.411643 | 1.4:-83839427 | MS.gene73425:CDS |
| TCTGATACAAATGGGGTTGA+TGG | 0.415325 | 1.4:-83839501 | MS.gene73425:CDS |
| CTTCTGCCACAGCAGTAGAT+TGG | 0.418879 | 1.4:+83838998 | None:intergenic |
| ATTGCGCGGCCTCAGGTTCA+TGG | 0.422152 | 1.4:-83840968 | MS.gene73425:CDS |
| TGGGATTCTATGGTGGTCAT+TGG | 0.423535 | 1.4:-83842028 | MS.gene73425:CDS |
| TTATAGTCTTCTTGCGAGGC+AGG | 0.424206 | 1.4:-83838234 | MS.gene73425:CDS |
| AGAAGGAGTTGAAGTGAAAA+GGG | 0.425565 | 1.4:-83843726 | MS.gene73425:CDS |
| TCTTTATGCTGTGATCATAA+GGG | 0.426565 | 1.4:-83839345 | MS.gene73425:CDS |
| TTATCGATGGCGGAATTGCC+TGG | 0.427069 | 1.4:-83842717 | MS.gene73425:CDS |
| TGAATAGAAATTTGCTACTT+GGG | 0.427437 | 1.4:+83843461 | None:intergenic |
| GAAGAGCCAGCCACAAGGAC+AGG | 0.427978 | 1.4:+83842278 | None:intergenic |
| TCATTACCTGTAAGCATCAA+TGG | 0.428341 | 1.4:-83842443 | MS.gene73425:CDS |
| TGGGAACTGTCCCTTGTTGA+TGG | 0.428999 | 1.4:-83843149 | MS.gene73425:CDS |
| TACCACAATCCCACAAGAAA+GGG | 0.429846 | 1.4:-83843006 | MS.gene73425:CDS |
| GTATGAGATTGCGCGGCCTC+AGG | 0.431270 | 1.4:-83840975 | MS.gene73425:CDS |
| AGCTAAAAGGGCATACAGAT+TGG | 0.432748 | 1.4:-83842484 | MS.gene73425:CDS |
| TACAAATGGGGTTGATGGTC+TGG | 0.434125 | 1.4:-83839496 | MS.gene73425:CDS |
| GAAGTATGGCTTTGGCAGGT+TGG | 0.434435 | 1.4:-83838979 | MS.gene73425:CDS |
| AAGGACAGGACCTTCTATAT+AGG | 0.435333 | 1.4:+83842292 | None:intergenic |
| AACTGGCATGGCACACACTT+TGG | 0.435584 | 1.4:-83839410 | MS.gene73425:CDS |
| TTTGATTGGACATGAGGATT+GGG | 0.435859 | 1.4:-83842228 | MS.gene73425:CDS |
| CATGAGACCTCTGATACAAA+TGG | 0.436275 | 1.4:-83839510 | MS.gene73425:CDS |
| CTGTATATGCCATTCCCGTT+TGG | 0.438205 | 1.4:+83842338 | None:intergenic |
| GAAGGTCCTGTCCTTGTGGC+TGG | 0.439711 | 1.4:-83842284 | MS.gene73425:CDS |
| GAAGTGAAAAGGGTATTCAT+TGG | 0.440981 | 1.4:-83843716 | MS.gene73425:CDS |
| AGGGACACAAGCGGATTATC+TGG | 0.442277 | 1.4:-83838211 | MS.gene73425:CDS |
| ATGAGACCTCTGATACAAAT+GGG | 0.444909 | 1.4:-83839509 | MS.gene73425:CDS |
| CACGGCCATGAATTTGCAAC+AGG | 0.445611 | 1.4:-83838170 | MS.gene73425:CDS |
| AGATGGTACTGTTTGTATAT+GGG | 0.448027 | 1.4:-83842921 | MS.gene73425:CDS |
| AAAGGGGTTACATGTATTGA+TGG | 0.450575 | 1.4:-83842989 | MS.gene73425:CDS |
| CAAACGGGAATGGCATATAC+AGG | 0.452267 | 1.4:-83842337 | MS.gene73425:CDS |
| ACATGTAACCCCTTTCTTGT+GGG | 0.452970 | 1.4:+83842997 | None:intergenic |
| CGTCCTTGCAATGGGAGGAT+TGG | 0.455070 | 1.4:-83842679 | MS.gene73425:CDS |
| AACACAGTTGGAACTGCGTC+GGG | 0.458249 | 1.4:+83839456 | None:intergenic |
| ATTGGGTATATTCGGTTGAA+TGG | 0.458591 | 1.4:-83842211 | MS.gene73425:CDS |
| GGTGGTCATTGGAGCCCAAA+TGG | 0.468423 | 1.4:-83842017 | MS.gene73425:CDS |
| GGTGCAAATATGTCAGCTCT+TGG | 0.475040 | 1.4:-83840764 | MS.gene73425:CDS |
| GTGTTTACAATCACAACAAC+AGG | 0.476242 | 1.4:-83838844 | MS.gene73425:intron |
| TACGTAGCTCCGTGCCAAAC+GGG | 0.479132 | 1.4:-83842352 | MS.gene73425:CDS |
| AGGCAATTCCGCCATCGATA+AGG | 0.479680 | 1.4:+83842719 | None:intergenic |
| TGACAACTGGCTTACACAAA+AGG | 0.480622 | 1.4:-83841934 | MS.gene73425:CDS |
| CATGCCAGTTGATCTTCAAT+TGG | 0.481967 | 1.4:+83839423 | None:intergenic |
| GATATAGCATGGGCTAGATC+TGG | 0.482923 | 1.4:-83841882 | MS.gene73425:CDS |
| AATTCCATCATTTCTTCGAT+CGG | 0.483583 | 1.4:+83838028 | None:intergenic |
| TGGACAAGACTATGATGATC+TGG | 0.487149 | 1.4:-83842118 | MS.gene73425:CDS |
| GTACCACAATCCCACAAGAA+AGG | 0.487530 | 1.4:-83843007 | MS.gene73425:CDS |
| CTTCCGTGGATGCAACCAAA+GGG | 0.488239 | 1.4:+83842183 | None:intergenic |
| AGAGAAACCTCGACTTTCCA+TGG | 0.491446 | 1.4:+83841016 | None:intergenic |
| AATTATGGTTTCTCAAACTG+AGG | 0.493661 | 1.4:-83842966 | MS.gene73425:CDS |
| AGTAGCAAATTTCTATTCAA+AGG | 0.493848 | 1.4:-83843457 | MS.gene73425:intron |
| GGATGGAAGCATTGTAGTAC+CGG | 0.495177 | 1.4:-83837943 | MS.gene73425:CDS |
| ACAAGATTCACCTTTACTGC+GGG | 0.496063 | 1.4:-83842653 | MS.gene73425:CDS |
| CTGTGTCACTGTTAAGCTAT+GGG | 0.496668 | 1.4:+83838927 | None:intergenic |
| CAACTAGAATTTATGCTCCA+TGG | 0.497145 | 1.4:-83841033 | MS.gene73425:CDS |
| TGATGAAGATTTCTTCTCTA+CGG | 0.497228 | 1.4:+83838118 | None:intergenic |
| TTACGTAGCTCCGTGCCAAA+CGG | 0.497618 | 1.4:-83842353 | MS.gene73425:CDS |
| ACCCCTTTCTTGTGGGATTG+TGG | 0.499253 | 1.4:+83843004 | None:intergenic |
| CTAGCTGTTGGAATGGAAAA+CGG | 0.499403 | 1.4:-83838005 | MS.gene73425:CDS |
| GTAGTGTGACAGCATTGTCT+TGG | 0.501252 | 1.4:-83838061 | MS.gene73425:CDS |
| AGCTTATCATCCTATATAGA+AGG | 0.501427 | 1.4:-83842302 | MS.gene73425:CDS |
| TGATTGTAAACACAGAGAAC+TGG | 0.501451 | 1.4:+83838854 | None:intergenic |
| CTGTCATACAATTTATATCA+TGG | 0.501729 | 1.4:+83840945 | None:intergenic |
| TCTGTGTCACTGTTAAGCTA+TGG | 0.504079 | 1.4:+83838926 | None:intergenic |
| CTCTTCAAGATGGAGAGTCT+TGG | 0.504927 | 1.4:-83840997 | MS.gene73425:CDS |
| CTCCCCGATCGAAGAAATGA+TGG | 0.505220 | 1.4:-83838032 | MS.gene73425:CDS |
| TACATGTAACCCCTTTCTTG+TGG | 0.505650 | 1.4:+83842996 | None:intergenic |
| GGTCAAATCGTCCTTGCAAT+GGG | 0.506094 | 1.4:-83842687 | MS.gene73425:CDS |
| GCCAGTTGATCTTCAATTGG+AGG | 0.508620 | 1.4:+83839426 | None:intergenic |
| AAGACTATAACTAATTTCAC+TGG | 0.509024 | 1.4:+83838247 | None:intergenic |
| GTCGAGGTTTCTCTTCAAGA+TGG | 0.509924 | 1.4:-83841007 | MS.gene73425:CDS |
| AAAATGTTGGTGATGACAAC+TGG | 0.510399 | 1.4:-83841947 | MS.gene73425:CDS |
| CTGTGGCAGAAGTATGGCTT+TGG | 0.512071 | 1.4:-83838987 | MS.gene73425:CDS |
| TGACTGTAAATTATCATGCC+TGG | 0.515474 | 1.4:-83842775 | MS.gene73425:CDS |
| AATGATGGAATTCTAGCTGT+TGG | 0.518192 | 1.4:-83838017 | MS.gene73425:CDS |
| GGCAGAAGTATGGCTTTGGC+AGG | 0.518853 | 1.4:-83838983 | MS.gene73425:CDS |
| TAGTGTGACAGCATTGTCTT+GGG | 0.519272 | 1.4:-83838060 | MS.gene73425:CDS |
| TTTGCATCTACTTCTTCAGA+TGG | 0.519491 | 1.4:-83842938 | MS.gene73425:CDS |
| GAACTAAGCCACTGTGCTCT+GGG | 0.520247 | 1.4:-83842047 | MS.gene73425:CDS |
| AGCTCCGTGCCAAACGGGAA+TGG | 0.521165 | 1.4:-83842347 | MS.gene73425:CDS |
| CCTTTGGTTGCATCCACGGA+AGG | 0.522914 | 1.4:-83842182 | MS.gene73425:CDS |
| ATGACAGTTGTTCATAGTAA+GGG | 0.523352 | 1.4:-83840929 | MS.gene73425:CDS |
| ATAACAGGCTTCCCCTTCCG+TGG | 0.525346 | 1.4:+83842169 | None:intergenic |
| ATAATAATGCATATCGAAGA+AGG | 0.526392 | 1.4:-83843743 | None:intergenic |
| AGTCTACAACTTGCTTCTTG+TGG | 0.530154 | 1.4:-83837822 | MS.gene73425:CDS |
| TTGCTATCTGGAGATGCTGA+TGG | 0.531360 | 1.4:-83843185 | MS.gene73425:CDS |
| TGGTCAAATCGTCCTTGCAA+TGG | 0.532210 | 1.4:-83842688 | MS.gene73425:CDS |
| TTGACAACAGCTTTGTGACC+AGG | 0.532936 | 1.4:+83843499 | None:intergenic |
| AAGGGCATACAGATTGGATC+CGG | 0.534028 | 1.4:-83842478 | MS.gene73425:CDS |
| TGCCTCTACAGTAAACCGTC+TGG | 0.535874 | 1.4:-83837874 | MS.gene73425:CDS |
| TTTGGTTGCATCCACGGAAG+GGG | 0.535971 | 1.4:-83842180 | MS.gene73425:CDS |
| AAAAGGGTATTCATTGGAGC+AGG | 0.536530 | 1.4:-83843710 | MS.gene73425:CDS |
| TCACATAAACTCTATGGCCA+TGG | 0.537110 | 1.4:-83839381 | MS.gene73425:CDS |
| CTGTTGTCAATTGCACTCAC+TGG | 0.537167 | 1.4:-83843486 | MS.gene73425:CDS |
| GTGACAGCATTGTCTTGGGT+TGG | 0.548956 | 1.4:-83838056 | MS.gene73425:CDS |
| GGAGGTTCAGTAAACACAGT+TGG | 0.549347 | 1.4:+83839444 | None:intergenic |
| GATGCAGATAAAATGCTTTG+TGG | 0.550954 | 1.4:+83842143 | None:intergenic |
| CTACAGTAAACCGTCTGGCA+TGG | 0.553191 | 1.4:-83837869 | MS.gene73425:CDS |
| CTTTGGTTGCATCCACGGAA+GGG | 0.553868 | 1.4:-83842181 | MS.gene73425:CDS |
| AGAAGAGCAGCGGCGAAACC+CGG | 0.555080 | 1.4:+83837924 | None:intergenic |
| CATCAGCTCCGCCAACAAAA+CGG | 0.556187 | 1.4:+83840900 | None:intergenic |
| CCTTCCGTGGATGCAACCAA+AGG | 0.557493 | 1.4:+83842182 | None:intergenic |
| CATCGGTGACTGATATAGCA+TGG | 0.557572 | 1.4:-83841893 | MS.gene73425:CDS |
| ATGCATACGAATTTGGAAGA+TGG | 0.561651 | 1.4:-83842378 | MS.gene73425:CDS |
| AAGAAAATAGCTCATTTCCA+TGG | 0.561954 | 1.4:+83839364 | None:intergenic |
| TATCCAATCCTCCCATTGCA+AGG | 0.562834 | 1.4:+83842676 | None:intergenic |
| TGATGGTGCTATTATTCTAT+GGG | 0.564507 | 1.4:-83843168 | MS.gene73425:CDS |
| GGGAACTGTCCCTTGTTGAT+GGG | 0.565491 | 1.4:-83843148 | MS.gene73425:CDS |
| GTTGGTTCATGGAAAGCAGT+TGG | 0.566583 | 1.4:-83838961 | MS.gene73425:CDS |
| TATGCCATTCCCGTTTGGCA+CGG | 0.567694 | 1.4:+83842343 | None:intergenic |
| TGCCAGACGGTTTACTGTAG+AGG | 0.573011 | 1.4:+83837872 | None:intergenic |
| TATAGAAGGTCCTGTCCTTG+TGG | 0.573054 | 1.4:-83842288 | MS.gene73425:CDS |
| CTTACACAAAAGGTTCCCTC+TGG | 0.573072 | 1.4:-83841924 | MS.gene73425:CDS |
| TGGAATTCTAGCTGTTGGAA+TGG | 0.578033 | 1.4:-83838012 | MS.gene73425:CDS |
| TACCATAGATTTAGAACCAA+CGG | 0.580301 | 1.4:+83842743 | None:intergenic |
| ATCAACCCCATTTGTATCAG+AGG | 0.580402 | 1.4:+83839503 | None:intergenic |
| TTCCATCATTTCTTCGATCG+GGG | 0.580541 | 1.4:+83838030 | None:intergenic |
| CGACAAGACAGTGAAAATCT+GGG | 0.588108 | 1.4:-83838141 | MS.gene73425:CDS |
| AAACACAGTTGGAACTGCGT+CGG | 0.588864 | 1.4:+83839455 | None:intergenic |
| GATCATCATAGTCTTGTCCA+TGG | 0.589029 | 1.4:+83842121 | None:intergenic |
| TAGTCTTCTTGCGAGGCAGG+AGG | 0.589362 | 1.4:-83838231 | MS.gene73425:CDS |
| TGCGTCGGGAACAGTTTCAA+AGG | 0.592159 | 1.4:+83839470 | None:intergenic |
| ACTGTCCCTTGTTGATGGGA+AGG | 0.592872 | 1.4:-83843144 | MS.gene73425:intron |
| AGCTTTGTGACCAGGAAGAG+TGG | 0.598753 | 1.4:+83843507 | None:intergenic |
| ACGATTTGACCACTACATCC+AGG | 0.600975 | 1.4:+83842699 | None:intergenic |
| TCCTATAACAGACAAGAGGA+TGG | 0.602584 | 1.4:-83837960 | MS.gene73425:CDS |
| TGACAGTTGTTCATAGTAAG+GGG | 0.603153 | 1.4:-83840928 | MS.gene73425:CDS |
| TATATCAGCTAGCCATGACC+AGG | 0.603806 | 1.4:-83841850 | MS.gene73425:intron |
| TCTGGCATGGAGGAAAATTG+AGG | 0.604356 | 1.4:-83837856 | MS.gene73425:CDS |
| AGTCTTCTTGCGAGGCAGGA+GGG | 0.605997 | 1.4:-83838230 | MS.gene73425:CDS |
| ATCGGTGACTGATATAGCAT+GGG | 0.610638 | 1.4:-83841892 | MS.gene73425:CDS |
| ACCTGTAAGCATCAATGGAG+AGG | 0.613920 | 1.4:-83842438 | MS.gene73425:CDS |
| CGAGGCAGGAGGGACACAAG+CGG | 0.615848 | 1.4:-83838220 | MS.gene73425:CDS |
| TAGCTTAACAGTGACACAGA+TGG | 0.618590 | 1.4:-83838923 | MS.gene73425:CDS |
| TGGATGAATGTGGTTACTGT+TGG | 0.619332 | 1.4:-83842071 | MS.gene73425:CDS |
| GCGGAATTGCCTGGATGTAG+TGG | 0.621195 | 1.4:-83842708 | MS.gene73425:CDS |
| AAGAAGAAGAGCCAGCCACA+AGG | 0.621956 | 1.4:+83842273 | None:intergenic |
| AAGATTCACCTTTACTGCGG+GGG | 0.621967 | 1.4:-83842651 | MS.gene73425:CDS |
| TTATGCTCCATGGAAAGTCG+AGG | 0.623529 | 1.4:-83841023 | MS.gene73425:CDS |
| TCCGTGGATGCAACCAAAGG+GGG | 0.625596 | 1.4:+83842185 | None:intergenic |
| GTACTTCCACTGACGAGTAG+TGG | 0.627306 | 1.4:-83842893 | MS.gene73425:intron |
| GCAGGCCCAATCTACTGCTG+TGG | 0.627705 | 1.4:-83839004 | MS.gene73425:intron |
| CAATTGAAGATCAACTGGCA+TGG | 0.629052 | 1.4:-83839422 | MS.gene73425:CDS |
| TTAAGCTATGGGATTGCAAG+CGG | 0.629501 | 1.4:+83838938 | None:intergenic |
| CAAATCGTCCTTGCAATGGG+AGG | 0.631304 | 1.4:-83842684 | MS.gene73425:CDS |
| AACAAGATTCACCTTTACTG+CGG | 0.631780 | 1.4:-83842654 | MS.gene73425:CDS |
| ATCTATGGTAGCCTTATCGA+TGG | 0.631961 | 1.4:-83842730 | MS.gene73425:CDS |
| TGTGCTCTGGGATTCTATGG+TGG | 0.635038 | 1.4:-83842035 | MS.gene73425:CDS |
| ATAACAAGACTTCTGCAAAG+TGG | 0.637064 | 1.4:+83840820 | None:intergenic |
| GATGGAAGCATTGTAGTACC+GGG | 0.637075 | 1.4:-83837942 | MS.gene73425:CDS |
| GGCTTACCACTACTCGTCAG+TGG | 0.637295 | 1.4:+83842887 | None:intergenic |
| AAAACGGCCAAATAGAGTTG+TGG | 0.638326 | 1.4:-83837989 | MS.gene73425:CDS |
| AGTCTTGGTATGAGATTGCG+CGG | 0.641165 | 1.4:-83840982 | MS.gene73425:CDS |
| GATGTACCTTCCCATCAACA+AGG | 0.642227 | 1.4:+83843138 | None:intergenic |
| ACCGATGCAAAATGACCAGA+GGG | 0.642490 | 1.4:+83841909 | None:intergenic |
| GTTGCAAATTCATGGCCGTG+TGG | 0.643567 | 1.4:+83838173 | None:intergenic |
| CTGAAAAGACTTCTGGTGTG+TGG | 0.643767 | 1.4:-83842091 | MS.gene73425:CDS |
| TCATGTTCTTGGAACCCACA+CGG | 0.651148 | 1.4:-83838188 | MS.gene73425:CDS |
| CTTGGGGTTGAAAATGGCGA+CGG | 0.653338 | 1.4:+83843619 | None:intergenic |
| ACCACAATCCCACAAGAAAG+GGG | 0.653351 | 1.4:-83843005 | MS.gene73425:CDS |
| ATATCATGGCCATGAACCTG+AGG | 0.654048 | 1.4:+83840959 | None:intergenic |
| TTGCAAATTCATGGCCGTGT+GGG | 0.657111 | 1.4:+83838174 | None:intergenic |
| CAGTAAACCGTCTGGCATGG+AGG | 0.660516 | 1.4:-83837866 | MS.gene73425:CDS |
| TTCCGTGGATGCAACCAAAG+GGG | 0.666647 | 1.4:+83842184 | None:intergenic |
| TCTGTCCTATAACAGACAAG+AGG | 0.667351 | 1.4:-83837964 | MS.gene73425:CDS |
| CACCGATGCAAAATGACCAG+AGG | 0.669482 | 1.4:+83841908 | None:intergenic |
| TACGCGAACAAGAAGAGCAG+CGG | 0.669620 | 1.4:+83837914 | None:intergenic |
| TTAGTTATAGTCTTCTTGCG+AGG | 0.676218 | 1.4:-83838238 | MS.gene73425:CDS |
| GTAATGAGAAGTCCAAACTC+CGG | 0.676979 | 1.4:+83842459 | None:intergenic |
| CAAGATTCACCTTTACTGCG+GGG | 0.678899 | 1.4:-83842652 | MS.gene73425:CDS |
| AAACGGGAATGGCATATACA+GGG | 0.680280 | 1.4:-83842336 | MS.gene73425:CDS |
| TTCTGGTGTGTGGATGAATG+TGG | 0.682155 | 1.4:-83842081 | MS.gene73425:CDS |
| ATAGTGAACAACGTTTCTTG+GGG | 0.684400 | 1.4:-83843677 | MS.gene73425:CDS |
| TATGGTAGCCTTATCGATGG+CGG | 0.688793 | 1.4:-83842727 | MS.gene73425:CDS |
| ATGTACCTTCCCATCAACAA+GGG | 0.699218 | 1.4:+83843139 | None:intergenic |
| GTCACACTACTCGTAAATGG+AGG | 0.699933 | 1.4:+83838074 | None:intergenic |
| TGAGACCTCTGATACAAATG+GGG | 0.710699 | 1.4:-83839508 | MS.gene73425:CDS |
| CGGGAATGGCATATACAGGG+AGG | 0.738065 | 1.4:-83842333 | MS.gene73425:CDS |
| CATAGAATCCCAGAGCACAG+TGG | 0.755507 | 1.4:+83842039 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGATCATTTTTTTTTTT+TGG | - | chr1.4:83842761-83842780 | MS.gene73425:CDS | 10.0% |
| !! | AAATACTTGAATAAAACTAT+TGG | - | chr1.4:83840979-83840998 | MS.gene73425:CDS | 15.0% |
| !! | AAATAGGATACAATAATATA+GGG | - | chr1.4:83841128-83841147 | MS.gene73425:intron | 15.0% |
| !! | AATCATCAATAACATTATTA+GGG | + | chr1.4:83838263-83838282 | None:intergenic | 15.0% |
| !! | AATTAATGTATATCAAATGT+TGG | + | chr1.4:83842379-83842398 | None:intergenic | 15.0% |
| !! | ATGTTAGTAATCTATAATTA+TGG | + | chr1.4:83838919-83838938 | None:intergenic | 15.0% |
| !! | GAAACAAAAATTAAAGATAA+AGG | + | chr1.4:83837945-83837964 | None:intergenic | 15.0% |
| !! | TAAATAGGATACAATAATAT+AGG | - | chr1.4:83841127-83841146 | MS.gene73425:intron | 15.0% |
| !! | TAATCATCAATAACATTATT+AGG | + | chr1.4:83838264-83838283 | None:intergenic | 15.0% |
| !! | TTTAATTAGTTGTATAAACT+TGG | - | chr1.4:83840368-83840387 | MS.gene73425:intron | 15.0% |
| !! | AAACAATTATATATCTGTTC+TGG | - | chr1.4:83841927-83841946 | MS.gene73425:CDS | 20.0% |
| !! | AAATACTAATCACTTAATTG+TGG | - | chr1.4:83843239-83843258 | MS.gene73425:intron | 20.0% |
| !! | AATAGGATACAATAATATAG+GGG | - | chr1.4:83841129-83841148 | MS.gene73425:intron | 20.0% |
| !! | ATAAATAATTTATGCATTGC+AGG | - | chr1.4:83842497-83842516 | MS.gene73425:CDS | 20.0% |
| !! | CATCTGTTAATTTATCTATT+AGG | - | chr1.4:83839739-83839758 | MS.gene73425:intron | 20.0% |
| !! | TAACATCAGAAAATAAAACA+CGG | + | chr1.4:83841893-83841912 | None:intergenic | 20.0% |
| !! | TAGATGATCTATTAACTTAT+TGG | - | chr1.4:83840215-83840234 | MS.gene73425:intron | 20.0% |
| !! | TTATACAACTAATTAAACCA+TGG | + | chr1.4:83840365-83840384 | None:intergenic | 20.0% |
| !!! | AACGTTTTCAAAAATGATAA+TGG | + | chr1.4:83840671-83840690 | None:intergenic | 20.0% |
| !!! | AGACATTTTCGAATTATAAA+AGG | + | chr1.4:83839786-83839805 | None:intergenic | 20.0% |
| !!! | ATGATGTATTTTTAAATACC+TGG | + | chr1.4:83839690-83839709 | None:intergenic | 20.0% |
| !!! | TCTTTTCAATTCAATTTCTT+TGG | - | chr1.4:83841706-83841725 | MS.gene73425:intron | 20.0% |
| !!! | TTCCTTATAGTTTTCTTTTT+GGG | - | chr1.4:83838949-83838968 | MS.gene73425:CDS | 20.0% |
| !!! | TTTAAAATGCCACATTTTAT+TGG | - | chr1.4:83840271-83840290 | MS.gene73425:intron | 20.0% |
| !!! | TTTTTTATGTGACAAATAAC+AGG | - | chr1.4:83840837-83840856 | MS.gene73425:CDS | 20.0% |
| ! | AACATCAGAAAATAAAACAC+GGG | + | chr1.4:83841892-83841911 | None:intergenic | 25.0% |
| ! | AAGACTATAACTAATTTCAC+TGG | + | chr1.4:83843275-83843294 | None:intergenic | 25.0% |
| ! | AATAAAAAGTTACGAGAGTT+GGG | - | chr1.4:83841744-83841763 | MS.gene73425:intron | 25.0% |
| ! | ACTTGAATAAAACTATTGGT+TGG | - | chr1.4:83840983-83841002 | MS.gene73425:CDS | 25.0% |
| ! | AGTAGCAAATTTCTATTCAA+AGG | - | chr1.4:83838062-83838081 | MS.gene73425:CDS | 25.0% |
| ! | ATAACAGTAAACATTGTCAT+TGG | + | chr1.4:83838666-83838685 | None:intergenic | 25.0% |
| ! | ATCCTCAAATTTACAAACTT+TGG | + | chr1.4:83841966-83841985 | None:intergenic | 25.0% |
| ! | ATCTTTCTGTCAAATTATAC+AGG | + | chr1.4:83842251-83842270 | None:intergenic | 25.0% |
| ! | ATGCGTAGATAAACAAAAAA+AGG | + | chr1.4:83840165-83840184 | None:intergenic | 25.0% |
| ! | CTAAAATTGAATCTCCATTT+GGG | + | chr1.4:83839519-83839538 | None:intergenic | 25.0% |
| ! | CTGTCATACAATTTATATCA+TGG | + | chr1.4:83840577-83840596 | None:intergenic | 25.0% |
| ! | TAAAGGTGAATTAGTAGTTA+AGG | - | chr1.4:83841071-83841090 | MS.gene73425:intron | 25.0% |
| ! | TAATAAAAAGTTACGAGAGT+TGG | - | chr1.4:83841743-83841762 | MS.gene73425:intron | 25.0% |
| ! | TACATTAATTTCAACCAACT+TGG | - | chr1.4:83842389-83842408 | MS.gene73425:CDS | 25.0% |
| ! | TAGGAATATTGTGTGTAAAT+AGG | - | chr1.4:83841112-83841131 | MS.gene73425:intron | 25.0% |
| ! | TAGTAAATAGTTACAGCTTA+TGG | - | chr1.4:83841020-83841039 | MS.gene73425:CDS | 25.0% |
| ! | TCAACAAATTAACTAACCTT+GGG | + | chr1.4:83840804-83840823 | None:intergenic | 25.0% |
| ! | TCATAATAGTAATGCAGAAA+AGG | + | chr1.4:83842747-83842766 | None:intergenic | 25.0% |
| ! | TGCGTAGATAAACAAAAAAA+GGG | + | chr1.4:83840164-83840183 | None:intergenic | 25.0% |
| ! | TTCAACAAATTAACTAACCT+TGG | + | chr1.4:83840805-83840824 | None:intergenic | 25.0% |
| ! | TTGTCATTACCAATAAAATG+TGG | + | chr1.4:83840283-83840302 | None:intergenic | 25.0% |
| !! | AATCTATAGTAAAGCTTTTG+TGG | + | chr1.4:83839718-83839737 | None:intergenic | 25.0% |
| !! | ACTTGATAGCTTTCATTTAA+TGG | - | chr1.4:83838438-83838457 | MS.gene73425:intron | 25.0% |
| !! | ACTTTTTATTAACAGCTGTT+AGG | + | chr1.4:83841734-83841753 | None:intergenic | 25.0% |
| !! | AGAGGTAAACAATATTTTTC+TGG | - | chr1.4:83839099-83839118 | MS.gene73425:intron | 25.0% |
| !! | ATCATAGAGAGTATAGAATT+TGG | - | chr1.4:83838129-83838148 | MS.gene73425:CDS | 25.0% |
| !! | ATTAAGTTGTTCATTCAAAC+AGG | - | chr1.4:83843141-83843160 | MS.gene73425:intron | 25.0% |
| !! | GCTGATATTTCTACATTATT+TGG | - | chr1.4:83842464-83842483 | MS.gene73425:CDS | 25.0% |
| !! | GTGGCATTTTAAACATTTTT+AGG | + | chr1.4:83840264-83840283 | None:intergenic | 25.0% |
| !! | GTTCCTTATAGTTTTCTTTT+TGG | - | chr1.4:83838948-83838967 | MS.gene73425:CDS | 25.0% |
| !! | TACATGTATTGATGGAATTA+TGG | - | chr1.4:83838538-83838557 | MS.gene73425:intron | 25.0% |
| !! | TATTTCACATAGCGTATTTT+TGG | - | chr1.4:83841600-83841619 | MS.gene73425:intron | 25.0% |
| !! | TCTTACAATTTTCTTGACTA+TGG | - | chr1.4:83842296-83842315 | MS.gene73425:CDS | 25.0% |
| !! | TTAAGTTGTTCATTCAAACA+GGG | - | chr1.4:83843142-83843161 | MS.gene73425:intron | 25.0% |
| !!! | GAAAAAAGAGCATTAGAAAT+TGG | + | chr1.4:83842357-83842376 | None:intergenic | 25.0% |
| !!! | TATTTTTAAATACCTGGTCA+TGG | + | chr1.4:83839684-83839703 | None:intergenic | 25.0% |
| !!! | TCTATTTTTTGCGTTTATAG+TGG | - | chr1.4:83838474-83838493 | MS.gene73425:intron | 25.0% |
| !!! | TGAATAGAAATTTGCTACTT+GGG | + | chr1.4:83838061-83838080 | None:intergenic | 25.0% |
| !!! | TTGAATAGAAATTTGCTACT+TGG | + | chr1.4:83838062-83838081 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGGTGACTTTCTT+TGG | - | chr1.4:83842774-83842793 | MS.gene73425:CDS | 25.0% |
| AACAAAACCATAGTCATAGA+AGG | - | chr1.4:83841851-83841870 | MS.gene73425:CDS | 30.0% | |
| AACATTGTCATTGGAAAAGT+AGG | + | chr1.4:83838657-83838676 | None:intergenic | 30.0% | |
| AAGAAAATAGCTCATTTCCA+TGG | + | chr1.4:83842158-83842177 | None:intergenic | 30.0% | |
| AAGACAAATGCATACGAATT+TGG | - | chr1.4:83839134-83839153 | MS.gene73425:intron | 30.0% | |
| AAGATAAAGGATGAGTGAAA+AGG | + | chr1.4:83837932-83837951 | None:intergenic | 30.0% | |
| AATAGTGAACAACGTTTCTT+GGG | - | chr1.4:83837841-83837860 | MS.gene73425:CDS | 30.0% | |
| AATCATTTATACTCTCAGTC+AGG | + | chr1.4:83842881-83842900 | None:intergenic | 30.0% | |
| AATTATGGTTTCTCAAACTG+AGG | - | chr1.4:83838553-83838572 | MS.gene73425:intron | 30.0% | |
| AATTCCATCATTTCTTCGAT+CGG | + | chr1.4:83843494-83843513 | None:intergenic | 30.0% | |
| ACAAAACCATAGTCATAGAA+GGG | - | chr1.4:83841852-83841871 | MS.gene73425:CDS | 30.0% | |
| ACATTGTCATTGGAAAAGTA+GGG | + | chr1.4:83838656-83838675 | None:intergenic | 30.0% | |
| AGATGGTACTGTTTGTATAT+GGG | - | chr1.4:83838598-83838617 | MS.gene73425:intron | 30.0% | |
| AGATTCATCATTATGAATCC+GGG | + | chr1.4:83840048-83840067 | None:intergenic | 30.0% | |
| AGATTGTTTGAGAGAGTTTA+TGG | + | chr1.4:83838190-83838209 | None:intergenic | 30.0% | |
| AGCTTATCATCCTATATAGA+AGG | - | chr1.4:83839217-83839236 | MS.gene73425:intron | 30.0% | |
| AGGGTTGAAATAAGTCAAAA+AGG | + | chr1.4:83841558-83841577 | None:intergenic | 30.0% | |
| AGTGATTCATTAGAGTGAAT+CGG | + | chr1.4:83840088-83840107 | None:intergenic | 30.0% | |
| ATATATCTGTTCTGGTGTAT+TGG | - | chr1.4:83841935-83841954 | MS.gene73425:CDS | 30.0% | |
| ATGACAGTTGTTCATAGTAA+GGG | - | chr1.4:83840590-83840609 | MS.gene73425:intron | 30.0% | |
| ATGTTATCAATAGCAGATTG+CGG | + | chr1.4:83841640-83841659 | None:intergenic | 30.0% | |
| ATTGGAAGCTTTACGTATTA+TGG | + | chr1.4:83841506-83841525 | None:intergenic | 30.0% | |
| CACACTGATATGTAAATACT+TGG | - | chr1.4:83841155-83841174 | MS.gene73425:intron | 30.0% | |
| CTCCAAAGTTTGTAAATTTG+AGG | - | chr1.4:83841961-83841980 | MS.gene73425:CDS | 30.0% | |
| CTCCCAAAAAGAAAACTATA+AGG | + | chr1.4:83838954-83838973 | None:intergenic | 30.0% | |
| GAAATAAGTCAAAAAGGGAA+TGG | + | chr1.4:83841552-83841571 | None:intergenic | 30.0% | |
| GACAAATTCAAGATAACAAG+TGG | + | chr1.4:83840427-83840446 | None:intergenic | 30.0% | |
| GAGATCACATTGTTTAATGT+TGG | - | chr1.4:83840868-83840887 | MS.gene73425:CDS | 30.0% | |
| GAGATTCATCATTATGAATC+CGG | + | chr1.4:83840049-83840068 | None:intergenic | 30.0% | |
| GATACAAAACTGAATCCAAT+TGG | - | chr1.4:83839870-83839889 | MS.gene73425:intron | 30.0% | |
| GATATTTAGTCCATCATTCT+AGG | - | chr1.4:83838721-83838740 | MS.gene73425:intron | 30.0% | |
| GCGTAGATAAACAAAAAAAG+GGG | + | chr1.4:83840163-83840182 | None:intergenic | 30.0% | |
| GCTAAAATTGAATCTCCATT+TGG | + | chr1.4:83839520-83839539 | None:intergenic | 30.0% | |
| GGGTTGAAATAAGTCAAAAA+GGG | + | chr1.4:83841557-83841576 | None:intergenic | 30.0% | |
| GTACACTATATAAGTGCTTA+TGG | - | chr1.4:83838084-83838103 | MS.gene73425:CDS | 30.0% | |
| TACATTCATGTGAGCTAAAA+GGG | - | chr1.4:83839023-83839042 | MS.gene73425:intron | 30.0% | |
| TAGTAGTTAAGGTTAGTAGT+TGG | - | chr1.4:83841082-83841101 | MS.gene73425:intron | 30.0% | |
| TATGACAGTTGTTCATAGTA+AGG | - | chr1.4:83840589-83840608 | MS.gene73425:intron | 30.0% | |
| TATGGAACTGAATTGAACAT+TGG | - | chr1.4:83842830-83842849 | MS.gene73425:intron | 30.0% | |
| TCCAATCAAAAGAGATTCTA+AGG | + | chr1.4:83839281-83839300 | None:intergenic | 30.0% | |
| TCTCGAGTATGTATCTATTT+CGG | - | chr1.4:83839899-83839918 | MS.gene73425:intron | 30.0% | |
| TCTTTATGCTGTGATCATAA+GGG | - | chr1.4:83842174-83842193 | MS.gene73425:CDS | 30.0% | |
| TGATGAAGATTTCTTCTCTA+CGG | + | chr1.4:83843404-83843423 | None:intergenic | 30.0% | |
| TGTATACACAGCAAAAGAAT+TGG | - | chr1.4:83838300-83838319 | MS.gene73425:intron | 30.0% | |
| TGTGTATACAAAGTAAGAGA+GGG | + | chr1.4:83838290-83838309 | None:intergenic | 30.0% | |
| TTCTTTATGCTGTGATCATA+AGG | - | chr1.4:83842173-83842192 | MS.gene73425:CDS | 30.0% | |
| ! | ACATGATCTATTTTCACCAT+AGG | - | chr1.4:83841439-83841458 | MS.gene73425:intron | 30.0% |
| ! | ATAGGCAGAAGAAAAAGTAT+AGG | + | chr1.4:83838991-83839010 | None:intergenic | 30.0% |
| ! | ATCACTTAATTGTGGTTTGT+AGG | - | chr1.4:83843247-83843266 | MS.gene73425:intron | 30.0% |
| ! | TACCATAGATTTAGAACCAA+CGG | + | chr1.4:83838779-83838798 | None:intergenic | 30.0% |
| ! | TCCTTAGAATCTCTTTTGAT+TGG | - | chr1.4:83839277-83839296 | MS.gene73425:intron | 30.0% |
| ! | TCTCGAGTATGTATCTATTT+TGG | - | chr1.4:83839899-83839918 | MS.gene73425:intron | 30.0% |
| ! | TTCCATCTTTGGAAAAATGT+TGG | - | chr1.4:83839559-83839578 | MS.gene73425:intron | 30.0% |
| ! | TTGACAAACATCCAGATTTT+GGG | - | chr1.4:83840734-83840753 | MS.gene73425:intron | 30.0% |
| !! | CTCTTTATTTCTGCTATTGA+CGG | + | chr1.4:83841381-83841400 | None:intergenic | 30.0% |
| !! | GAGCATCGGTAATAATATAT+TGG | + | chr1.4:83841524-83841543 | None:intergenic | 30.0% |
| !! | TACAGTGTTGACAAAAAAAG+TGG | + | chr1.4:83840133-83840152 | None:intergenic | 30.0% |
| !! | TCAATTTTAGCACATGGATA+TGG | - | chr1.4:83839529-83839548 | MS.gene73425:intron | 30.0% |
| !! | TGATGGTGCTATTATTCTAT+GGG | - | chr1.4:83838351-83838370 | MS.gene73425:intron | 30.0% |
| !!! | ATTTTTTGCGTTTATAGTGG+AGG | - | chr1.4:83838477-83838496 | MS.gene73425:intron | 30.0% |
| AAACGCGTAAAATAAATGCC+TGG | + | chr1.4:83843170-83843189 | None:intergenic | 35.0% | |
| AAAGGGGTTACATGTATTGA+TGG | - | chr1.4:83838530-83838549 | MS.gene73425:intron | 35.0% | |
| AACAAGATTCACCTTTACTG+CGG | - | chr1.4:83838865-83838884 | MS.gene73425:CDS | 35.0% | |
| AACGCGTAAAATAAATGCCT+GGG | + | chr1.4:83843169-83843188 | None:intergenic | 35.0% | |
| AACTAACCTTGGGCATAAAT+AGG | + | chr1.4:83840794-83840813 | None:intergenic | 35.0% | |
| AACTTTGACTGCAAAGGATT+TGG | - | chr1.4:83840921-83840940 | MS.gene73425:CDS | 35.0% | |
| AAGAAGGAGTTGAAGTGAAA+AGG | - | chr1.4:83837792-83837811 | MS.gene73425:CDS | 35.0% | |
| AATAACCTGAAAACCGCTTA+TGG | + | chr1.4:83842992-83843011 | None:intergenic | 35.0% | |
| AATGTACAAACTGGGTTCAT+AGG | + | chr1.4:83839009-83839028 | None:intergenic | 35.0% | |
| ACATATTTGCACCCAAAATC+TGG | + | chr1.4:83840748-83840767 | None:intergenic | 35.0% | |
| ACATGAGGATTGGGTATATT+CGG | - | chr1.4:83839300-83839319 | MS.gene73425:intron | 35.0% | |
| ACTTATGACATGTCCATAAG+CGG | - | chr1.4:83842976-83842995 | MS.gene73425:CDS | 35.0% | |
| AGAAGGAGTTGAAGTGAAAA+GGG | - | chr1.4:83837793-83837812 | MS.gene73425:CDS | 35.0% | |
| AGATAAACAAAAAAAGGGGC+TGG | + | chr1.4:83840159-83840178 | None:intergenic | 35.0% | |
| AGATTCATCATGATGAATCC+GGG | + | chr1.4:83839946-83839965 | None:intergenic | 35.0% | |
| AGGAAACTAAAGTGAAGAGT+TGG | - | chr1.4:83841459-83841478 | MS.gene73425:intron | 35.0% | |
| AGTTAAGGTTAGTAGTTGGT+TGG | - | chr1.4:83841086-83841105 | MS.gene73425:intron | 35.0% | |
| ATAACAAGACTTCTGCAAAG+TGG | + | chr1.4:83840702-83840721 | None:intergenic | 35.0% | |
| ATAGTGAACAACGTTTCTTG+GGG | - | chr1.4:83837842-83837861 | MS.gene73425:CDS | 35.0% | |
| ATGAGACCTCTGATACAAAT+GGG | - | chr1.4:83842010-83842029 | MS.gene73425:CDS | 35.0% | |
| ATGCATACGAATTTGGAAGA+TGG | - | chr1.4:83839141-83839160 | MS.gene73425:intron | 35.0% | |
| ATTCCATCATTTCTTCGATC+GGG | + | chr1.4:83843493-83843512 | None:intergenic | 35.0% | |
| ATTGGGTATATTCGGTTGAA+TGG | - | chr1.4:83839308-83839327 | MS.gene73425:intron | 35.0% | |
| CAAAAACCTATTTATGCCCA+AGG | - | chr1.4:83840785-83840804 | MS.gene73425:CDS | 35.0% | |
| CAACTAGAATTTATGCTCCA+TGG | - | chr1.4:83840486-83840505 | MS.gene73425:intron | 35.0% | |
| CAGATGGTACTGTTTGTATA+TGG | - | chr1.4:83838597-83838616 | MS.gene73425:intron | 35.0% | |
| CAGTGAGTTAGACAACATAT+AGG | + | chr1.4:83839810-83839829 | None:intergenic | 35.0% | |
| CATGTTGCTATGCAGAATAA+AGG | - | chr1.4:83841054-83841073 | MS.gene73425:intron | 35.0% | |
| CCATAGAGTTTATGTGATTC+AGG | + | chr1.4:83842135-83842154 | None:intergenic | 35.0% | |
| CCTGAATCACATAAACTCTA+TGG | - | chr1.4:83842132-83842151 | MS.gene73425:CDS | 35.0% | |
| CTCACATGAATGTACAAACT+GGG | + | chr1.4:83839017-83839036 | None:intergenic | 35.0% | |
| CTGTGTATACAAAGTAAGAG+AGG | + | chr1.4:83838291-83838310 | None:intergenic | 35.0% | |
| GAATAGTGAACAACGTTTCT+TGG | - | chr1.4:83837840-83837859 | MS.gene73425:CDS | 35.0% | |
| GAATCTCGATTTAACAACCA+TGG | - | chr1.4:83840345-83840364 | MS.gene73425:intron | 35.0% | |
| GAGATTCATCATGATGAATC+CGG | + | chr1.4:83839947-83839966 | None:intergenic | 35.0% | |
| GATGCAGATAAAATGCTTTG+TGG | + | chr1.4:83839379-83839398 | None:intergenic | 35.0% | |
| GATTCATCATTATGAATCCG+GGG | + | chr1.4:83840047-83840066 | None:intergenic | 35.0% | |
| GCATCTCATATTGAGGATAT+GGG | - | chr1.4:83841794-83841813 | MS.gene73425:intron | 35.0% | |
| GTACATTCATGTGAGCTAAA+AGG | - | chr1.4:83839022-83839041 | MS.gene73425:intron | 35.0% | |
| GTGATTCATTAGAGTGAATC+GGG | + | chr1.4:83840087-83840106 | None:intergenic | 35.0% | |
| GTGTTTACAATCACAACAAC+AGG | - | chr1.4:83842675-83842694 | MS.gene73425:CDS | 35.0% | |
| TACTCGAGATTAGTACCAAT+TGG | + | chr1.4:83839990-83840009 | None:intergenic | 35.0% | |
| TACTCGAGATTTGTACCAAT+TGG | + | chr1.4:83839888-83839907 | None:intergenic | 35.0% | |
| TAGAGCAGTAAAGTGTACAA+CGG | + | chr1.4:83842442-83842461 | None:intergenic | 35.0% | |
| TCATTACCTGTAAGCATCAA+TGG | - | chr1.4:83839076-83839095 | MS.gene73425:intron | 35.0% | |
| TCTTTCTCATTGTTATCTGC+TGG | - | chr1.4:83840894-83840913 | MS.gene73425:CDS | 35.0% | |
| TGACAGTTGTTCATAGTAAG+GGG | - | chr1.4:83840591-83840610 | MS.gene73425:intron | 35.0% | |
| TGACTGTAAATTATCATGCC+TGG | - | chr1.4:83838744-83838763 | MS.gene73425:intron | 35.0% | |
| TGATTCATTAGAGTGAATCG+GGG | + | chr1.4:83840086-83840105 | None:intergenic | 35.0% | |
| TGATTGTAAACACAGAGAAC+TGG | + | chr1.4:83842668-83842687 | None:intergenic | 35.0% | |
| TGCATCTCATATTGAGGATA+TGG | - | chr1.4:83841793-83841812 | MS.gene73425:intron | 35.0% | |
| TTAGTTATAGTCTTCTTGCG+AGG | - | chr1.4:83843281-83843300 | MS.gene73425:intron | 35.0% | |
| TTGTCAATTAGTGGCAATAG+TGG | - | chr1.4:83841225-83841244 | MS.gene73425:intron | 35.0% | |
| TTTACAGTCACCTAGAATGA+TGG | + | chr1.4:83838734-83838753 | None:intergenic | 35.0% | |
| TTTGATTGGACATGAGGATT+GGG | - | chr1.4:83839291-83839310 | MS.gene73425:intron | 35.0% | |
| TTTGCATCTACTTCTTCAGA+TGG | - | chr1.4:83838581-83838600 | MS.gene73425:intron | 35.0% | |
| ! | AAGCATTTTATCTGCATCCA+TGG | - | chr1.4:83839381-83839400 | MS.gene73425:CDS | 35.0% |
| ! | AATGATGGAATTCTAGCTGT+TGG | - | chr1.4:83843502-83843521 | MS.gene73425:CDS | 35.0% |
| ! | ATACTTGGTGAATAGACCAT+TGG | - | chr1.4:83841170-83841189 | MS.gene73425:intron | 35.0% |
| ! | CACCAACATTTTTCCAAAGA+TGG | + | chr1.4:83839564-83839583 | None:intergenic | 35.0% |
| ! | CTATTGATAACATTGCTCGT+AGG | - | chr1.4:83841647-83841666 | MS.gene73425:intron | 35.0% |
| ! | CTCTTCACTTTAGTTTCCTA+TGG | + | chr1.4:83841458-83841477 | None:intergenic | 35.0% |
| ! | CTTGACAAACATCCAGATTT+TGG | - | chr1.4:83840733-83840752 | MS.gene73425:intron | 35.0% |
| ! | GTAGAGGCATGACATATAAA+AGG | + | chr1.4:83843634-83843653 | None:intergenic | 35.0% |
| ! | GTTAGTAGTTGGTTGGTTAT+AGG | - | chr1.4:83841093-83841112 | MS.gene73425:intron | 35.0% |
| ! | TAAGCGCTTGTGATTTTGTT+CGG | - | chr1.4:83842936-83842955 | MS.gene73425:CDS | 35.0% |
| ! | TGGTTGACATTTGTTGAGTT+TGG | - | chr1.4:83842794-83842813 | MS.gene73425:intron | 35.0% |
| !! | AAAATGTTGGTGATGACAAC+TGG | - | chr1.4:83839572-83839591 | MS.gene73425:intron | 35.0% |
| !! | AATGCTTTGTGGTTGATAAC+AGG | + | chr1.4:83839368-83839387 | None:intergenic | 35.0% |
| !! | AGTTGTCTGCAATTTTGACA+CGG | + | chr1.4:83840471-83840490 | None:intergenic | 35.0% |
| !! | ATCTCTTTTGATTGGACATG+AGG | - | chr1.4:83839285-83839304 | MS.gene73425:intron | 35.0% |
| !! | ATTTTAGCACATGGATATGG+TGG | - | chr1.4:83839532-83839551 | MS.gene73425:intron | 35.0% |
| !! | CTGATGGTGCTATTATTCTA+TGG | - | chr1.4:83838350-83838369 | MS.gene73425:intron | 35.0% |
| !! | GAACTGCATTATTTGCTATC+TGG | - | chr1.4:83838322-83838341 | MS.gene73425:intron | 35.0% |
| !! | GAAGTGAAAAGGGTATTCAT+TGG | - | chr1.4:83837803-83837822 | MS.gene73425:CDS | 35.0% |
| !! | GGAGATTCAATTTTAGCACA+TGG | - | chr1.4:83839523-83839542 | MS.gene73425:intron | 35.0% |
| !! | TTCCGTTGGTTCTAAATCTA+TGG | - | chr1.4:83838774-83838793 | MS.gene73425:intron | 35.0% |
| !! | TTTTGATTGGACATGAGGAT+TGG | - | chr1.4:83839290-83839309 | MS.gene73425:intron | 35.0% |
| !!! | GCTTCTGGTTTTGTTTCTTT+TGG | - | chr1.4:83837866-83837885 | MS.gene73425:CDS | 35.0% |
| AAAACGGCCAAATAGAGTTG+TGG | - | chr1.4:83843530-83843549 | MS.gene73425:intron | 40.0% | |
| AAACGGGAATGGCATATACA+GGG | - | chr1.4:83839183-83839202 | MS.gene73425:intron | 40.0% | |
| AAGGACAGGACCTTCTATAT+AGG | + | chr1.4:83839230-83839249 | None:intergenic | 40.0% | |
| AATTGACAACTCCGTCTCTA+AGG | + | chr1.4:83841214-83841233 | None:intergenic | 40.0% | |
| ACAAGATTCACCTTTACTGC+GGG | - | chr1.4:83838866-83838885 | MS.gene73425:CDS | 40.0% | |
| ACAGACTCCACAACTCTATT+TGG | + | chr1.4:83843540-83843559 | None:intergenic | 40.0% | |
| ACAGATATGCTTGCATTCTG+AGG | + | chr1.4:83842719-83842738 | None:intergenic | 40.0% | |
| ACATGTAACCCCTTTCTTGT+GGG | + | chr1.4:83838525-83838544 | None:intergenic | 40.0% | |
| ACCTCCAATTGAAGATCAAC+TGG | - | chr1.4:83842092-83842111 | MS.gene73425:CDS | 40.0% | |
| ACGCGTAAAATAAATGCCTG+GGG | + | chr1.4:83843168-83843187 | None:intergenic | 40.0% | |
| AGTAACCTTGGGGTTGAAAA+TGG | + | chr1.4:83837909-83837928 | None:intergenic | 40.0% | |
| AGTGAAAAGGAGTAACCTTG+GGG | + | chr1.4:83837919-83837938 | None:intergenic | 40.0% | |
| ATATGGGTCCATCCAAATGA+TGG | - | chr1.4:83841810-83841829 | MS.gene73425:intron | 40.0% | |
| ATCAACCCCATTTGTATCAG+AGG | + | chr1.4:83842019-83842038 | None:intergenic | 40.0% | |
| ATCGGTGACTGATATAGCAT+GGG | - | chr1.4:83839627-83839646 | MS.gene73425:intron | 40.0% | |
| ATGTACCTTCCCATCAACAA+GGG | + | chr1.4:83838383-83838402 | None:intergenic | 40.0% | |
| CAAAACGATCTAAGCCAAGT+TGG | + | chr1.4:83842406-83842425 | None:intergenic | 40.0% | |
| CAATTGAAGATCAACTGGCA+TGG | - | chr1.4:83842097-83842116 | MS.gene73425:CDS | 40.0% | |
| CATGAGACCTCTGATACAAA+TGG | - | chr1.4:83842009-83842028 | MS.gene73425:CDS | 40.0% | |
| CATGCCAGTTGATCTTCAAT+TGG | + | chr1.4:83842099-83842118 | None:intergenic | 40.0% | |
| CGACAAGACAGTGAAAATCT+GGG | - | chr1.4:83843378-83843397 | MS.gene73425:intron | 40.0% | |
| CTAGCTGTTGGAATGGAAAA+CGG | - | chr1.4:83843514-83843533 | MS.gene73425:CDS | 40.0% | |
| GAAATAGCAGCTAGAGTTGT+GGG | + | chr1.4:83841586-83841605 | None:intergenic | 40.0% | |
| GAGTGAAAAGGAGTAACCTT+GGG | + | chr1.4:83837920-83837939 | None:intergenic | 40.0% | |
| GATCATGTTTAGTGCACACA+TGG | + | chr1.4:83841427-83841446 | None:intergenic | 40.0% | |
| GATGTCTGCATCTCATATTG+AGG | - | chr1.4:83841787-83841806 | MS.gene73425:intron | 40.0% | |
| GATTCATCATGATGAATCCG+GGG | + | chr1.4:83839945-83839964 | None:intergenic | 40.0% | |
| GCTCACATGAATGTACAAAC+TGG | + | chr1.4:83839018-83839037 | None:intergenic | 40.0% | |
| GGACATATTGTCTACGTACT+TGG | - | chr1.4:83841765-83841784 | MS.gene73425:intron | 40.0% | |
| GGATTATCTGGTCATGTTCT+TGG | - | chr1.4:83843320-83843339 | MS.gene73425:intron | 40.0% | |
| GGTGTTAACTTTGACTGCAA+AGG | - | chr1.4:83840915-83840934 | MS.gene73425:CDS | 40.0% | |
| GTAATGAGAAGTCCAAACTC+CGG | + | chr1.4:83839063-83839082 | None:intergenic | 40.0% | |
| GTGAACCTGTTGCAAATTCA+TGG | + | chr1.4:83843357-83843376 | None:intergenic | 40.0% | |
| TAAAGTGTACAACGGTGAGA+CGG | + | chr1.4:83842434-83842453 | None:intergenic | 40.0% | |
| TACAGCTTATGGTAAGCTGT+TGG | - | chr1.4:83841031-83841050 | MS.gene73425:CDS | 40.0% | |
| TACATGTAACCCCTTTCTTG+TGG | + | chr1.4:83838526-83838545 | None:intergenic | 40.0% | |
| TACCACAATCCCACAAGAAA+GGG | - | chr1.4:83838513-83838532 | MS.gene73425:intron | 40.0% | |
| TAGAAGGGAAACCTTAGAGA+CGG | - | chr1.4:83841200-83841219 | MS.gene73425:intron | 40.0% | |
| TAGCTTAACAGTGACACAGA+TGG | - | chr1.4:83842596-83842615 | MS.gene73425:intron | 40.0% | |
| TAGTGCACACATGGATTCTT+TGG | + | chr1.4:83841418-83841437 | None:intergenic | 40.0% | |
| TAGTGTGACAGCATTGTCTT+GGG | - | chr1.4:83843459-83843478 | MS.gene73425:CDS | 40.0% | |
| TATCACTACCAGCCATCATT+TGG | + | chr1.4:83841825-83841844 | None:intergenic | 40.0% | |
| TCAAAATTTGAGCACTCTGC+AGG | + | chr1.4:83837992-83838011 | None:intergenic | 40.0% | |
| TCACATAAACTCTATGGCCA+TGG | - | chr1.4:83842138-83842157 | MS.gene73425:CDS | 40.0% | |
| TCATGTAAGGTATGCACTGT+TGG | - | chr1.4:83842213-83842232 | MS.gene73425:CDS | 40.0% | |
| TCCATCCTCTTGTCTGTTAT+AGG | + | chr1.4:83843563-83843582 | None:intergenic | 40.0% | |
| TCCTATAACAGACAAGAGGA+TGG | - | chr1.4:83843559-83843578 | MS.gene73425:intron | 40.0% | |
| TCGTAGGTAGTTGACTGATA+GGG | - | chr1.4:83840952-83840971 | MS.gene73425:CDS | 40.0% | |
| TCTGATACAAATGGGGTTGA+TGG | - | chr1.4:83842018-83842037 | MS.gene73425:CDS | 40.0% | |
| TCTGTCCTATAACAGACAAG+AGG | - | chr1.4:83843555-83843574 | MS.gene73425:intron | 40.0% | |
| TGAAATAGCAGCTAGAGTTG+TGG | + | chr1.4:83841587-83841606 | None:intergenic | 40.0% | |
| TGAATCTCATCTTGAATCCC+CGG | - | chr1.4:83839925-83839944 | MS.gene73425:intron | 40.0% | |
| TGAGACCTCTGATACAAATG+GGG | - | chr1.4:83842011-83842030 | MS.gene73425:CDS | 40.0% | |
| TGAGTGAAAAGGAGTAACCT+TGG | + | chr1.4:83837921-83837940 | None:intergenic | 40.0% | |
| TGGACAAGACTATGATGATC+TGG | - | chr1.4:83839401-83839420 | MS.gene73425:CDS | 40.0% | |
| TGGATGAATGTGGTTACTGT+TGG | - | chr1.4:83839448-83839467 | MS.gene73425:CDS | 40.0% | |
| TTAAGCTATGGGATTGCAAG+CGG | + | chr1.4:83842584-83842603 | None:intergenic | 40.0% | |
| TTATCCTAGCTTCGCCATTA+TGG | - | chr1.4:83841310-83841329 | MS.gene73425:intron | 40.0% | |
| TTCCATCATTTCTTCGATCG+GGG | + | chr1.4:83843492-83843511 | None:intergenic | 40.0% | |
| ! | AAGCGCTTGTGATTTTGTTC+GGG | - | chr1.4:83842937-83842956 | MS.gene73425:CDS | 40.0% |
| ! | AGCTAAAAGGGCATACAGAT+TGG | - | chr1.4:83839035-83839054 | MS.gene73425:intron | 40.0% |
| ! | AGTCTACAACTTGCTTCTTG+TGG | - | chr1.4:83843697-83843716 | MS.gene73425:CDS | 40.0% |
| ! | ATGCACTGTTGGTCTAACTA+TGG | - | chr1.4:83842224-83842243 | MS.gene73425:CDS | 40.0% |
| ! | ATTTTGTTCGGGAGAGCTTA+TGG | - | chr1.4:83842948-83842967 | MS.gene73425:CDS | 40.0% |
| ! | CAACTTGGCTTAGATCGTTT+TGG | - | chr1.4:83842404-83842423 | MS.gene73425:CDS | 40.0% |
| ! | CTGTGTCACTGTTAAGCTAT+GGG | + | chr1.4:83842595-83842614 | None:intergenic | 40.0% |
| ! | GCTTGTTGCTTCTTCATGTA+AGG | - | chr1.4:83842200-83842219 | MS.gene73425:CDS | 40.0% |
| ! | TCTGTGTCACTGTTAAGCTA+TGG | + | chr1.4:83842596-83842615 | None:intergenic | 40.0% |
| ! | TGACAACTGGCTTACACAAA+AGG | - | chr1.4:83839585-83839604 | MS.gene73425:intron | 40.0% |
| ! | TGGAATTCTAGCTGTTGGAA+TGG | - | chr1.4:83843507-83843526 | MS.gene73425:CDS | 40.0% |
| ! | TTTGGAGCACATCGATGTTA+TGG | - | chr1.4:83842812-83842831 | MS.gene73425:intron | 40.0% |
| !! | AAAAGGGTATTCATTGGAGC+AGG | - | chr1.4:83837809-83837828 | MS.gene73425:CDS | 40.0% |
| !! | ACCATTGGCTCTTTGTAGAA+GGG | - | chr1.4:83841185-83841204 | MS.gene73425:intron | 40.0% |
| !! | ATCTATGGTAGCCTTATCGA+TGG | - | chr1.4:83838789-83838808 | MS.gene73425:intron | 40.0% |
| !! | CAAATTTTGACCACTCTTCC+TGG | - | chr1.4:83838002-83838021 | MS.gene73425:CDS | 40.0% |
| !! | GATCATCATAGTCTTGTCCA+TGG | + | chr1.4:83839401-83839420 | None:intergenic | 40.0% |
| AAAGTGTACAACGGTGAGAC+GGG | + | chr1.4:83842433-83842452 | None:intergenic | 45.0% | |
| AACCAACGGAAAAAGAGTCC+AGG | + | chr1.4:83838765-83838784 | None:intergenic | 45.0% | |
| AACCATAGTCATAGAAGGGC+TGG | - | chr1.4:83841856-83841875 | MS.gene73425:CDS | 45.0% | |
| AAGATTCACCTTTACTGCGG+GGG | - | chr1.4:83838868-83838887 | MS.gene73425:CDS | 45.0% | |
| ACCACAATCCCACAAGAAAG+GGG | - | chr1.4:83838514-83838533 | MS.gene73425:intron | 45.0% | |
| ACCGATGCAAAATGACCAGA+GGG | + | chr1.4:83839613-83839632 | None:intergenic | 45.0% | |
| ACCTCTCCATTGATGCTTAC+AGG | + | chr1.4:83839085-83839104 | None:intergenic | 45.0% | |
| ACCTGTAAGCATCAATGGAG+AGG | - | chr1.4:83839081-83839100 | MS.gene73425:intron | 45.0% | |
| ACGATTTGACCACTACATCC+AGG | + | chr1.4:83838823-83838842 | None:intergenic | 45.0% | |
| ACTACCAGCCATCATTTGGA+TGG | + | chr1.4:83841821-83841840 | None:intergenic | 45.0% | |
| AGAGAAACCTCGACTTTCCA+TGG | + | chr1.4:83840506-83840525 | None:intergenic | 45.0% | |
| AGCTAGAGTTGTGGGCAAAT+AGG | + | chr1.4:83841578-83841597 | None:intergenic | 45.0% | |
| AGTCTTGGTATGAGATTGCG+CGG | - | chr1.4:83840537-83840556 | MS.gene73425:intron | 45.0% | |
| ATATCATGGCCATGAACCTG+AGG | + | chr1.4:83840563-83840582 | None:intergenic | 45.0% | |
| CAAACGGGAATGGCATATAC+AGG | - | chr1.4:83839182-83839201 | MS.gene73425:intron | 45.0% | |
| CAAGATTCACCTTTACTGCG+GGG | - | chr1.4:83838867-83838886 | MS.gene73425:CDS | 45.0% | |
| CAATAGCAGATTGCGGAAAC+TGG | + | chr1.4:83841633-83841652 | None:intergenic | 45.0% | |
| CAGTTTCTGAGCTGATGTAG+CGG | - | chr1.4:83841351-83841370 | MS.gene73425:intron | 45.0% | |
| CATCGGTGACTGATATAGCA+TGG | - | chr1.4:83839626-83839645 | MS.gene73425:intron | 45.0% | |
| CTCGTAGGTAGTTGACTGAT+AGG | - | chr1.4:83840951-83840970 | MS.gene73425:CDS | 45.0% | |
| CTCTTCAAGATGGAGAGTCT+TGG | - | chr1.4:83840522-83840541 | MS.gene73425:intron | 45.0% | |
| CTGAAAAGACTTCTGGTGTG+TGG | - | chr1.4:83839428-83839447 | MS.gene73425:CDS | 45.0% | |
| CTGTATATGCCATTCCCGTT+TGG | + | chr1.4:83839184-83839203 | None:intergenic | 45.0% | |
| CTGTTGTCAATTGCACTCAC+TGG | - | chr1.4:83838033-83838052 | MS.gene73425:CDS | 45.0% | |
| CTTACACAAAAGGTTCCCTC+TGG | - | chr1.4:83839595-83839614 | MS.gene73425:intron | 45.0% | |
| GAGACGGAGTTGTCAATTAG+TGG | - | chr1.4:83841216-83841235 | MS.gene73425:intron | 45.0% | |
| GATGTACCTTCCCATCAACA+AGG | + | chr1.4:83838384-83838403 | None:intergenic | 45.0% | |
| GCCAGTTGATCTTCAATTGG+AGG | + | chr1.4:83842096-83842115 | None:intergenic | 45.0% | |
| GCGACAAGACAGTGAAAATC+TGG | - | chr1.4:83843377-83843396 | MS.gene73425:intron | 45.0% | |
| GCTAGAGTTGTGGGCAAATA+GGG | + | chr1.4:83841577-83841596 | None:intergenic | 45.0% | |
| GCTGTCACACTACTCGTAAA+TGG | + | chr1.4:83843451-83843470 | None:intergenic | 45.0% | |
| GGATTTGGCTGTATACTCGT+AGG | - | chr1.4:83840936-83840955 | MS.gene73425:CDS | 45.0% | |
| GGTCAAATCGTCCTTGCAAT+GGG | - | chr1.4:83838832-83838851 | MS.gene73425:intron | 45.0% | |
| GGTGCAAATATGTCAGCTCT+TGG | - | chr1.4:83840755-83840774 | MS.gene73425:CDS | 45.0% | |
| GTACCACAATCCCACAAGAA+AGG | - | chr1.4:83838512-83838531 | MS.gene73425:intron | 45.0% | |
| GTAGTGTGACAGCATTGTCT+TGG | - | chr1.4:83843458-83843477 | MS.gene73425:CDS | 45.0% | |
| GTCACACTACTCGTAAATGG+AGG | + | chr1.4:83843448-83843467 | None:intergenic | 45.0% | |
| GTCGAGGTTTCTCTTCAAGA+TGG | - | chr1.4:83840512-83840531 | MS.gene73425:intron | 45.0% | |
| TACAGATTGGATCCGGAGTT+TGG | - | chr1.4:83839048-83839067 | MS.gene73425:intron | 45.0% | |
| TACCAGCCCTTCTATGACTA+TGG | + | chr1.4:83841861-83841880 | None:intergenic | 45.0% | |
| TATAGAAGGTCCTGTCCTTG+TGG | - | chr1.4:83839231-83839250 | MS.gene73425:intron | 45.0% | |
| TATATCAGCTAGCCATGACC+AGG | - | chr1.4:83839669-83839688 | MS.gene73425:intron | 45.0% | |
| TATCCAATCCTCCCATTGCA+AGG | + | chr1.4:83838846-83838865 | None:intergenic | 45.0% | |
| TCATGTTCTTGGAACCCACA+CGG | - | chr1.4:83843331-83843350 | MS.gene73425:intron | 45.0% | |
| TCCCTTCTACAAAGAGCCAA+TGG | + | chr1.4:83841189-83841208 | None:intergenic | 45.0% | |
| TCTGGCATGGAGGAAAATTG+AGG | - | chr1.4:83843663-83843682 | MS.gene73425:CDS | 45.0% | |
| TGGCGACAAAGATACCTTTC+CGG | + | chr1.4:83838899-83838918 | None:intergenic | 45.0% | |
| TGGGATTCTATGGTGGTCAT+TGG | - | chr1.4:83839491-83839510 | MS.gene73425:CDS | 45.0% | |
| TGGTCAAATCGTCCTTGCAA+TGG | - | chr1.4:83838831-83838850 | MS.gene73425:intron | 45.0% | |
| TTATAGTCTTCTTGCGAGGC+AGG | - | chr1.4:83843285-83843304 | MS.gene73425:intron | 45.0% | |
| TTATGCTCCATGGAAAGTCG+AGG | - | chr1.4:83840496-83840515 | MS.gene73425:intron | 45.0% | |
| TTCTGCCACAGCAGTAGATT+GGG | + | chr1.4:83842523-83842542 | None:intergenic | 45.0% | |
| TTCTGGTGTGTGGATGAATG+TGG | - | chr1.4:83839438-83839457 | MS.gene73425:CDS | 45.0% | |
| TTGCAAATTCATGGCCGTGT+GGG | + | chr1.4:83843348-83843367 | None:intergenic | 45.0% | |
| TTGCTATCTGGAGATGCTGA+TGG | - | chr1.4:83838334-83838353 | MS.gene73425:intron | 45.0% | |
| ! | AAGGGCATACAGATTGGATC+CGG | - | chr1.4:83839041-83839060 | MS.gene73425:intron | 45.0% |
| ! | AAGGGGAATCACCGTTTTGT+TGG | - | chr1.4:83840608-83840627 | MS.gene73425:intron | 45.0% |
| ! | CAATTTTCCTCCATGCCAGA+CGG | + | chr1.4:83843663-83843682 | None:intergenic | 45.0% |
| ! | CACACACCAGAAGTCTTTTC+AGG | + | chr1.4:83839430-83839449 | None:intergenic | 45.0% |
| ! | CATGTCCATAAGCGGTTTTC+AGG | - | chr1.4:83842984-83843003 | MS.gene73425:CDS | 45.0% |
| ! | GTTGGTTCATGGAAAGCAGT+TGG | - | chr1.4:83842558-83842577 | MS.gene73425:intron | 45.0% |
| ! | TTGACAACAGCTTTGTGACC+AGG | + | chr1.4:83838023-83838042 | None:intergenic | 45.0% |
| !! | ATGGTGGATCGTTCCATCTT+TGG | - | chr1.4:83839548-83839567 | MS.gene73425:intron | 45.0% |
| !! | GACCATTGGCTCTTTGTAGA+AGG | - | chr1.4:83841184-83841203 | MS.gene73425:intron | 45.0% |
| !! | GATATAGCATGGGCTAGATC+TGG | - | chr1.4:83839637-83839656 | MS.gene73425:intron | 45.0% |
| !! | GATGGAAGCATTGTAGTACC+GGG | - | chr1.4:83843577-83843596 | MS.gene73425:intron | 45.0% |
| !! | GGATGGAAGCATTGTAGTAC+CGG | - | chr1.4:83843576-83843595 | MS.gene73425:intron | 45.0% |
| !! | TACAAATGGGGTTGATGGTC+TGG | - | chr1.4:83842023-83842042 | MS.gene73425:CDS | 45.0% |
| !! | TATGGTAGCCTTATCGATGG+CGG | - | chr1.4:83838792-83838811 | MS.gene73425:intron | 45.0% |
| !! | TCCCTCTGGTCATTTTGCAT+CGG | - | chr1.4:83839609-83839628 | MS.gene73425:intron | 45.0% |
| AACTGGCATGGCACACACTT+TGG | - | chr1.4:83842109-83842128 | MS.gene73425:CDS | 50.0% | |
| AAGAAGAAGAGCCAGCCACA+AGG | + | chr1.4:83839249-83839268 | None:intergenic | 50.0% | |
| ACCCCTTTCTTGTGGGATTG+TGG | + | chr1.4:83838518-83838537 | None:intergenic | 50.0% | |
| AGGCAATTCCGCCATCGATA+AGG | + | chr1.4:83838803-83838822 | None:intergenic | 50.0% | |
| AGGGAATGGATGCAGAGCAT+CGG | + | chr1.4:83841538-83841557 | None:intergenic | 50.0% | |
| ATCGCCATAATGGCGAAGCT+AGG | + | chr1.4:83841317-83841336 | None:intergenic | 50.0% | |
| CAAATCGTCCTTGCAATGGG+AGG | - | chr1.4:83838835-83838854 | MS.gene73425:intron | 50.0% | |
| CACCGATGCAAAATGACCAG+AGG | + | chr1.4:83839614-83839633 | None:intergenic | 50.0% | |
| CACGGCCATGAATTTGCAAC+AGG | - | chr1.4:83843349-83843368 | MS.gene73425:intron | 50.0% | |
| CATAGAATCCCAGAGCACAG+TGG | + | chr1.4:83839483-83839502 | None:intergenic | 50.0% | |
| CATCAGCTCCGCCAACAAAA+CGG | + | chr1.4:83840622-83840641 | None:intergenic | 50.0% | |
| CGCTACATCAGCTCAGAAAC+TGG | + | chr1.4:83841353-83841372 | None:intergenic | 50.0% | |
| CTACAGTAAACCGTCTGGCA+TGG | - | chr1.4:83843650-83843669 | MS.gene73425:CDS | 50.0% | |
| CTACTGCTGTGGCAGAAGTA+TGG | - | chr1.4:83842526-83842545 | MS.gene73425:intron | 50.0% | |
| CTCCCCGATCGAAGAAATGA+TGG | - | chr1.4:83843487-83843506 | MS.gene73425:CDS | 50.0% | |
| CTTCCGTGGATGCAACCAAA+GGG | + | chr1.4:83839339-83839358 | None:intergenic | 50.0% | |
| CTTCTGCCACAGCAGTAGAT+TGG | + | chr1.4:83842524-83842543 | None:intergenic | 50.0% | |
| CTTGGGGTTGAAAATGGCGA+CGG | + | chr1.4:83837903-83837922 | None:intergenic | 50.0% | |
| CTTTGGTTGCATCCACGGAA+GGG | - | chr1.4:83839338-83839357 | MS.gene73425:CDS | 50.0% | |
| GAACTAAGCCACTGTGCTCT+GGG | - | chr1.4:83839472-83839491 | MS.gene73425:CDS | 50.0% | |
| GAGTGAATCGGGGTTCATTG+CGG | + | chr1.4:83840076-83840095 | None:intergenic | 50.0% | |
| GGGAACTGTCCCTTGTTGAT+GGG | - | chr1.4:83838371-83838390 | MS.gene73425:intron | 50.0% | |
| GTACTTCCACTGACGAGTAG+TGG | - | chr1.4:83838626-83838645 | MS.gene73425:intron | 50.0% | |
| GTGACAGCATTGTCTTGGGT+TGG | - | chr1.4:83843463-83843482 | MS.gene73425:CDS | 50.0% | |
| GTTGCAAATTCATGGCCGTG+TGG | + | chr1.4:83843349-83843368 | None:intergenic | 50.0% | |
| TACGCGAACAAGAAGAGCAG+CGG | + | chr1.4:83843608-83843627 | None:intergenic | 50.0% | |
| TAGCTTCGCCATTATGGCGA+TGG | - | chr1.4:83841316-83841335 | MS.gene73425:intron | 50.0% | |
| TATGCCATTCCCGTTTGGCA+CGG | + | chr1.4:83839179-83839198 | None:intergenic | 50.0% | |
| TGCCAGACGGTTTACTGTAG+AGG | + | chr1.4:83843650-83843669 | None:intergenic | 50.0% | |
| TGCCTCTACAGTAAACCGTC+TGG | - | chr1.4:83843645-83843664 | MS.gene73425:CDS | 50.0% | |
| TGCGTCGGGAACAGTTTCAA+AGG | + | chr1.4:83842052-83842071 | None:intergenic | 50.0% | |
| TGGCAGCCTGAAAAGACTTC+TGG | - | chr1.4:83839421-83839440 | MS.gene73425:CDS | 50.0% | |
| TGGGAACTGTCCCTTGTTGA+TGG | - | chr1.4:83838370-83838389 | MS.gene73425:intron | 50.0% | |
| TTACGTAGCTCCGTGCCAAA+CGG | - | chr1.4:83839166-83839185 | MS.gene73425:intron | 50.0% | |
| TTCCGTGGATGCAACCAAAG+GGG | + | chr1.4:83839338-83839357 | None:intergenic | 50.0% | |
| TTTGGTTGCATCCACGGAAG+GGG | - | chr1.4:83839339-83839358 | MS.gene73425:CDS | 50.0% | |
| ! | AACGTTTCTTGGGGTGCTTC+TGG | - | chr1.4:83837851-83837870 | MS.gene73425:CDS | 50.0% |
| ! | ACTGTCCCTTGTTGATGGGA+AGG | - | chr1.4:83838375-83838394 | MS.gene73425:intron | 50.0% |
| ! | AGCTTTGTGACCAGGAAGAG+TGG | + | chr1.4:83838015-83838034 | None:intergenic | 50.0% |
| ! | CTGTGGCAGAAGTATGGCTT+TGG | - | chr1.4:83842532-83842551 | MS.gene73425:intron | 50.0% |
| ! | TGCCTGGACTCTTTTTCCGT+TGG | - | chr1.4:83838760-83838779 | MS.gene73425:intron | 50.0% |
| !! | AGGGACACAAGCGGATTATC+TGG | - | chr1.4:83843308-83843327 | MS.gene73425:intron | 50.0% |
| !! | CACTGTGCTCTGGGATTCTA+TGG | - | chr1.4:83839481-83839500 | MS.gene73425:CDS | 50.0% |
| !! | GAAGTATGGCTTTGGCAGGT+TGG | - | chr1.4:83842540-83842559 | MS.gene73425:intron | 50.0% |
| !! | GGGAATCACCGTTTTGTTGG+CGG | - | chr1.4:83840611-83840630 | MS.gene73425:intron | 50.0% |
| !! | TGTGCTCTGGGATTCTATGG+TGG | - | chr1.4:83839484-83839503 | MS.gene73425:CDS | 50.0% |
| !! | TTATCGATGGCGGAATTGCC+TGG | - | chr1.4:83838802-83838821 | MS.gene73425:intron | 50.0% |
| AACAGCCGCCATCGCCATAA+TGG | + | chr1.4:83841327-83841346 | None:intergenic | 55.0% | |
| ACCCCCTTTGGTTGCATCCA+CGG | - | chr1.4:83839333-83839352 | MS.gene73425:CDS | 55.0% | |
| AGTCTTCTTGCGAGGCAGGA+GGG | - | chr1.4:83843289-83843308 | MS.gene73425:intron | 55.0% | |
| ATAACAGGCTTCCCCTTCCG+TGG | + | chr1.4:83839353-83839372 | None:intergenic | 55.0% | |
| CAGTAAACCGTCTGGCATGG+AGG | - | chr1.4:83843653-83843672 | MS.gene73425:CDS | 55.0% | |
| CCTTCCGTGGATGCAACCAA+AGG | + | chr1.4:83839340-83839359 | None:intergenic | 55.0% | |
| CCTTTGGTTGCATCCACGGA+AGG | - | chr1.4:83839337-83839356 | MS.gene73425:CDS | 55.0% | |
| CGAACTAAGCCACTGTGCTC+TGG | - | chr1.4:83839471-83839490 | MS.gene73425:CDS | 55.0% | |
| CGGGAATGGCATATACAGGG+AGG | - | chr1.4:83839186-83839205 | MS.gene73425:intron | 55.0% | |
| CGTCCTTGCAATGGGAGGAT+TGG | - | chr1.4:83838840-83838859 | MS.gene73425:intron | 55.0% | |
| CTTCGCCATTATGGCGATGG+CGG | - | chr1.4:83841319-83841338 | MS.gene73425:intron | 55.0% | |
| GCGGAATTGCCTGGATGTAG+TGG | - | chr1.4:83838811-83838830 | MS.gene73425:intron | 55.0% | |
| GGCTTACCACTACTCGTCAG+TGG | + | chr1.4:83838635-83838654 | None:intergenic | 55.0% | |
| GGGTCCATCCAAATGATGGC+TGG | - | chr1.4:83841814-83841833 | MS.gene73425:intron | 55.0% | |
| GGTGGTCATTGGAGCCCAAA+TGG | - | chr1.4:83839502-83839521 | MS.gene73425:CDS | 55.0% | |
| GGTTGAATGGCAACCCCCTT+TGG | - | chr1.4:83839321-83839340 | MS.gene73425:CDS | 55.0% | |
| GTTCATTCAAACAGGGCCCC+AGG | - | chr1.4:83843149-83843168 | MS.gene73425:CDS | 55.0% | |
| TACGTAGCTCCGTGCCAAAC+GGG | - | chr1.4:83839167-83839186 | MS.gene73425:intron | 55.0% | |
| TAGTCTTCTTGCGAGGCAGG+AGG | - | chr1.4:83843288-83843307 | MS.gene73425:intron | 55.0% | |
| TCCGTGGATGCAACCAAAGG+GGG | + | chr1.4:83839337-83839356 | None:intergenic | 55.0% | |
| TTCACCTTTACTGCGGGGGA+AGG | - | chr1.4:83838872-83838891 | MS.gene73425:CDS | 55.0% | |
| !! | CGTCGCCATTTTCAACCCCA+AGG | - | chr1.4:83837901-83837920 | MS.gene73425:CDS | 55.0% |
| !! | GGCAGAAGTATGGCTTTGGC+AGG | - | chr1.4:83842536-83842555 | MS.gene73425:intron | 55.0% |
| !! | GGCTTTGGCAGGTTGGTTCA+TGG | - | chr1.4:83842547-83842566 | MS.gene73425:intron | 55.0% |
| AGAAGAGCAGCGGCGAAACC+CGG | + | chr1.4:83843598-83843617 | None:intergenic | 60.0% | |
| AGCTCCGTGCCAAACGGGAA+TGG | - | chr1.4:83839172-83839191 | MS.gene73425:intron | 60.0% | |
| ATTGCGCGGCCTCAGGTTCA+TGG | - | chr1.4:83840551-83840570 | MS.gene73425:intron | 60.0% | |
| CTTTACTGCGGGGGAAGGAC+CGG | - | chr1.4:83838877-83838896 | MS.gene73425:CDS | 60.0% | |
| GAAGAGCCAGCCACAAGGAC+AGG | + | chr1.4:83839244-83839263 | None:intergenic | 60.0% | |
| GAAGGTCCTGTCCTTGTGGC+TGG | - | chr1.4:83839235-83839254 | MS.gene73425:intron | 60.0% | |
| GCAGGCCCAATCTACTGCTG+TGG | - | chr1.4:83842515-83842534 | MS.gene73425:intron | 60.0% | |
| GTATGAGATTGCGCGGCCTC+AGG | - | chr1.4:83840544-83840563 | MS.gene73425:intron | 60.0% | |
| CGAGGCAGGAGGGACACAAG+CGG | - | chr1.4:83843299-83843318 | MS.gene73425:intron | 65.0% | |
| CGGTCCTTCCCCCGCAGTAA+AGG | + | chr1.4:83838879-83838898 | None:intergenic | 65.0% | |
| CTGCGGGGGAAGGACCGGAA+AGG | - | chr1.4:83838882-83838901 | MS.gene73425:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 83837782 | 83843759 | 83837782 | ID=MS.gene73425 |
| chr1.4 | mRNA | 83837782 | 83843759 | 83837782 | ID=MS.gene73425.t1;Parent=MS.gene73425 |
| chr1.4 | exon | 83843619 | 83843759 | 83843619 | ID=MS.gene73425.t1.exon1;Parent=MS.gene73425.t1 |
| chr1.4 | CDS | 83843619 | 83843759 | 83843619 | ID=cds.MS.gene73425.t1;Parent=MS.gene73425.t1 |
| chr1.4 | exon | 83843458 | 83843545 | 83843458 | ID=MS.gene73425.t1.exon2;Parent=MS.gene73425.t1 |
| chr1.4 | CDS | 83843458 | 83843545 | 83843458 | ID=cds.MS.gene73425.t1;Parent=MS.gene73425.t1 |
| chr1.4 | exon | 83843145 | 83843230 | 83843145 | ID=MS.gene73425.t1.exon3;Parent=MS.gene73425.t1 |
| chr1.4 | CDS | 83843145 | 83843230 | 83843145 | ID=cds.MS.gene73425.t1;Parent=MS.gene73425.t1 |
| chr1.4 | exon | 83842894 | 83843047 | 83842894 | ID=MS.gene73425.t1.exon4;Parent=MS.gene73425.t1 |
| chr1.4 | CDS | 83842894 | 83843047 | 83842894 | ID=cds.MS.gene73425.t1;Parent=MS.gene73425.t1 |
| chr1.4 | exon | 83842638 | 83842798 | 83842638 | ID=MS.gene73425.t1.exon5;Parent=MS.gene73425.t1 |
| chr1.4 | CDS | 83842638 | 83842798 | 83842638 | ID=cds.MS.gene73425.t1;Parent=MS.gene73425.t1 |
| chr1.4 | exon | 83841851 | 83842522 | 83841851 | ID=MS.gene73425.t1.exon6;Parent=MS.gene73425.t1 |
| chr1.4 | CDS | 83841851 | 83842522 | 83841851 | ID=cds.MS.gene73425.t1;Parent=MS.gene73425.t1 |
| chr1.4 | exon | 83840735 | 83841056 | 83840735 | ID=MS.gene73425.t1.exon7;Parent=MS.gene73425.t1 |
| chr1.4 | CDS | 83840735 | 83841056 | 83840735 | ID=cds.MS.gene73425.t1;Parent=MS.gene73425.t1 |
| chr1.4 | exon | 83839320 | 83839537 | 83839320 | ID=MS.gene73425.t1.exon8;Parent=MS.gene73425.t1 |
| chr1.4 | CDS | 83839320 | 83839537 | 83839320 | ID=cds.MS.gene73425.t1;Parent=MS.gene73425.t1 |
| chr1.4 | exon | 83838845 | 83839022 | 83838845 | ID=MS.gene73425.t1.exon9;Parent=MS.gene73425.t1 |
| chr1.4 | CDS | 83838845 | 83839022 | 83838845 | ID=cds.MS.gene73425.t1;Parent=MS.gene73425.t1 |
| chr1.4 | exon | 83837782 | 83838272 | 83837782 | ID=MS.gene73425.t1.exon10;Parent=MS.gene73425.t1 |
| chr1.4 | CDS | 83837782 | 83838272 | 83837782 | ID=cds.MS.gene73425.t1;Parent=MS.gene73425.t1 |
| Gene Sequence |
| Protein sequence |
