Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73697.t1 | XP_013451989.1 | 95.6 | 343 | 15 | 0 | 5 | 347 | 1 | 343 | 4.60E-190 | 673.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73697.t1 | Q8L518 | 63.6 | 327 | 118 | 1 | 21 | 347 | 20 | 345 | 4.4e-125 | 449.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73697.t1 | B7FI98 | 95.6 | 343 | 15 | 0 | 5 | 347 | 1 | 343 | 3.3e-190 | 673.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053963 | MS.gene73697 | 0.800181 | 1.63E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73697.t1 | MTR_6g039820 | 95.627 | 343 | 15 | 0 | 5 | 347 | 1 | 343 | 0.0 | 692 |
| MS.gene73697.t1 | MTR_1g097850 | 73.684 | 342 | 76 | 1 | 5 | 346 | 1 | 328 | 0.0 | 540 |
| MS.gene73697.t1 | MTR_3g013430 | 66.159 | 328 | 110 | 1 | 20 | 347 | 127 | 453 | 2.48e-168 | 478 |
| MS.gene73697.t1 | MTR_6g040230 | 82.182 | 275 | 29 | 4 | 90 | 347 | 225 | 496 | 1.26e-158 | 454 |
| MS.gene73697.t1 | MTR_8g041330 | 61.280 | 328 | 126 | 1 | 20 | 347 | 36 | 362 | 1.73e-155 | 442 |
| MS.gene73697.t1 | MTR_1g097850 | 71.863 | 263 | 60 | 1 | 5 | 267 | 1 | 249 | 3.21e-143 | 405 |
| MS.gene73697.t1 | MTR_2g054370 | 34.877 | 324 | 186 | 7 | 33 | 347 | 59 | 366 | 3.99e-57 | 190 |
| MS.gene73697.t1 | MTR_8g041220 | 66.667 | 93 | 30 | 1 | 242 | 334 | 40 | 131 | 1.78e-40 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73697.t1 | AT1G74320 | 63.609 | 327 | 118 | 1 | 21 | 347 | 20 | 345 | 2.85e-161 | 455 |
| MS.gene73697.t1 | AT4G09760 | 58.721 | 344 | 139 | 3 | 5 | 347 | 1 | 342 | 7.92e-158 | 446 |
| MS.gene73697.t1 | AT4G09760 | 58.721 | 344 | 139 | 3 | 5 | 347 | 1 | 342 | 7.92e-158 | 446 |
| MS.gene73697.t1 | AT1G71697 | 59.302 | 344 | 138 | 2 | 5 | 346 | 1 | 344 | 1.63e-157 | 445 |
| MS.gene73697.t1 | AT4G09760 | 54.667 | 225 | 99 | 3 | 5 | 228 | 1 | 223 | 3.54e-87 | 263 |
| MS.gene73697.t1 | AT4G09760 | 53.333 | 210 | 95 | 3 | 5 | 213 | 1 | 208 | 1.88e-78 | 239 |
| MS.gene73697.t1 | AT2G26830 | 36.422 | 313 | 181 | 5 | 39 | 343 | 58 | 360 | 3.74e-59 | 195 |
Find 63 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTGCAAACCATCTATTT+TGG | 0.099275 | 6.3:+35556924 | MS.gene73697:CDS |
| ATTTGTCATTGCACCCTTTA+AGG | 0.103491 | 6.3:-35551429 | None:intergenic |
| CAAAAGGATATAAAGAATTT+TGG | 0.157757 | 6.3:+35555725 | MS.gene73697:CDS |
| ATTAAAGAAGCCTACTTTAT+TGG | 0.160257 | 6.3:+35557472 | MS.gene73697:CDS |
| ATAAAGTAGGCTTCTTTAAT+TGG | 0.187674 | 6.3:-35557469 | None:intergenic |
| GCTATCAACGAAGATATTTC+AGG | 0.273602 | 6.3:-35555514 | None:intergenic |
| GCAGCTGTGGCTGTAGATTT+AGG | 0.289983 | 6.3:+35551368 | MS.gene73697:CDS |
| CGGTCATGTTAGAAGGGTTT+TGG | 0.309388 | 6.3:+35551487 | MS.gene73697:CDS |
| TGTCACAATGATCTACAATA+TGG | 0.312751 | 6.3:+35555821 | MS.gene73697:CDS |
| TGTTGAGGTGAATCCCTTAA+AGG | 0.324014 | 6.3:+35551415 | MS.gene73697:CDS |
| GGACAGGGTCCGCGACTTCT+TGG | 0.327554 | 6.3:+35551590 | MS.gene73697:CDS |
| TCAGAAGAAAATCAAGAGAT+TGG | 0.359374 | 6.3:+35555794 | MS.gene73697:CDS |
| TTTGTCATTGCACCCTTTAA+GGG | 0.360563 | 6.3:-35551428 | None:intergenic |
| CTTCTTGGTCGGTTCACTAC+TGG | 0.369934 | 6.3:+35551605 | MS.gene73697:CDS |
| TGCGAATCATTTCTGTGAAA+TGG | 0.373754 | 6.3:+35556111 | MS.gene73697:CDS |
| TTCGCAAGGTCAAATGCAAC+TGG | 0.390033 | 6.3:-35556094 | None:intergenic |
| AAAGTGGCGGTCATGTTAGA+AGG | 0.392148 | 6.3:+35551480 | MS.gene73697:CDS |
| AAAGGGTGCAATGACAAATC+AGG | 0.395718 | 6.3:+35551433 | MS.gene73697:CDS |
| CCCACAAGCCCCAAAATAGA+TGG | 0.429365 | 6.3:-35556934 | None:intergenic |
| GTGCAAAGAAGGCTCAGATT+TGG | 0.434338 | 6.3:+35555575 | MS.gene73697:CDS |
| GTTGAGGTGAATCCCTTAAA+GGG | 0.456066 | 6.3:+35551416 | MS.gene73697:CDS |
| AAGACATTTGAATTATTGAA+AGG | 0.469355 | 6.3:+35551311 | MS.gene73697:CDS |
| AGACATTTGAATTATTGAAA+GGG | 0.472249 | 6.3:+35551312 | MS.gene73697:CDS |
| TCATATGCCTGGTGCAAAGA+AGG | 0.476216 | 6.3:+35555564 | MS.gene73697:CDS |
| ATCTGAGCCTTCTTTGCACC+AGG | 0.486876 | 6.3:-35555571 | None:intergenic |
| TAAAAGTTTATGCTCGCAAA+AGG | 0.492692 | 6.3:+35555709 | MS.gene73697:CDS |
| TTTCACAATCTTCATATGCC+TGG | 0.492944 | 6.3:+35555553 | MS.gene73697:CDS |
| TGAAGAGTTCATTCATGCTC+GGG | 0.495805 | 6.3:+35551634 | MS.gene73697:CDS |
| AGCAATTATGCCAATAAAGT+AGG | 0.516378 | 6.3:-35557482 | None:intergenic |
| TATACATACTTGAGTTCAGA+AGG | 0.517218 | 6.3:+35556319 | MS.gene73697:CDS |
| CTCAGATTTGGCAGAGAATG+AGG | 0.517306 | 6.3:+35555587 | MS.gene73697:CDS |
| ACGAAGATATTTCAGGGTTG+CGG | 0.519401 | 6.3:-35555507 | None:intergenic |
| TTTGAGTGTATGTCGAAGAA+TGG | 0.526924 | 6.3:+35551569 | MS.gene73697:CDS |
| AAAGCCAAGTGATGCTGAAG+TGG | 0.528186 | 6.3:+35556871 | MS.gene73697:CDS |
| TTGAAGAGTTCATTCATGCT+CGG | 0.528831 | 6.3:+35551633 | MS.gene73697:CDS |
| TACAATTGACTTTGACTACA+AGG | 0.531304 | 6.3:+35557418 | MS.gene73697:CDS |
| GTGAATTGGCCGACGAAAAG+TGG | 0.542123 | 6.3:+35551464 | MS.gene73697:CDS |
| CTATCAACGAAGATATTTCA+GGG | 0.545446 | 6.3:-35555513 | None:intergenic |
| TGATCCACTTCAGCATCACT+TGG | 0.550037 | 6.3:-35556875 | None:intergenic |
| GTGTATGTCGAAGAATGGAC+AGG | 0.552928 | 6.3:+35551574 | MS.gene73697:CDS |
| ACAATATGGTAACATCATGA+TGG | 0.554878 | 6.3:+35555835 | MS.gene73697:CDS |
| CAGATCTTGAGGAGCGTCGA+AGG | 0.559496 | 6.3:+35556290 | MS.gene73697:intron |
| ATTATATGGCGAAGGAGTTG+AGG | 0.566600 | 6.3:+35551514 | MS.gene73697:CDS |
| TAATGGTCTACCAGATCTTG+AGG | 0.574039 | 6.3:+35556279 | MS.gene73697:intron |
| ACAAGGAGTTCTCAAGGCAG+AGG | 0.574763 | 6.3:+35557435 | MS.gene73697:CDS |
| TTGGTTCGATTATATGGCGA+AGG | 0.583342 | 6.3:+35551506 | MS.gene73697:CDS |
| AAGATATTTCAGGGTTGCGG+AGG | 0.588179 | 6.3:-35555504 | None:intergenic |
| AGGGTCCGCGACTTCTTGGT+CGG | 0.588926 | 6.3:+35551594 | MS.gene73697:CDS |
| TTGACTACAAGGAGTTCTCA+AGG | 0.595449 | 6.3:+35557429 | MS.gene73697:CDS |
| GTCAAGAACATGAGGCGTGT+CGG | 0.599809 | 6.3:-35556149 | None:intergenic |
| AAGTGGCGGTCATGTTAGAA+GGG | 0.611501 | 6.3:+35551481 | MS.gene73697:CDS |
| CTTGACTACAGTAAATATCC+CGG | 0.613111 | 6.3:+35556166 | MS.gene73697:CDS |
| TTTCACAGAAATGATTCGCA+AGG | 0.613220 | 6.3:-35556108 | None:intergenic |
| AATGAAAGTTCTTGCAGCTG+TGG | 0.613557 | 6.3:+35551355 | MS.gene73697:CDS |
| GAACATGAGGCGTGTCGGTG+TGG | 0.622313 | 6.3:-35556144 | None:intergenic |
| GGATCAGTTAGCGAATCTTG+TGG | 0.624605 | 6.3:+35556892 | MS.gene73697:CDS |
| GAATCATTTCTGTGAAATGG+CGG | 0.647449 | 6.3:+35556114 | MS.gene73697:CDS |
| TCGCAAGGTCAAATGCAACT+GGG | 0.649429 | 6.3:-35556093 | None:intergenic |
| TGATGATGTGAGTACTGTTG+AGG | 0.658386 | 6.3:+35551400 | MS.gene73697:CDS |
| TTACTGTAGTCAAGAACATG+AGG | 0.665640 | 6.3:-35556157 | None:intergenic |
| GTGAACCGACCAAGAAGTCG+CGG | 0.686133 | 6.3:-35551599 | None:intergenic |
| TGTATGTCGAAGAATGGACA+GGG | 0.690528 | 6.3:+35551575 | MS.gene73697:CDS |
| AATTGGCCGACGAAAAGTGG+CGG | 0.713547 | 6.3:+35551467 | MS.gene73697:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr6.3:35554071-35554090 | MS.gene73697:intron | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr6.3:35554090-35554071 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr6.3:35554090-35554071 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr6.3:35554072-35554091 | MS.gene73697:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr6.3:35554091-35554072 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr6.3:35554072-35554091 | MS.gene73697:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr6.3:35554091-35554072 | None:intergenic | 0.0% |
| !! | CATATATATATATATATATG+GGG | - | chr6.3:35554893-35554874 | None:intergenic | 10.0% |
| !! | CCATATATATATATATATAT+GGG | + | chr6.3:35554506-35554525 | MS.gene73697:intron | 10.0% |
| !! | CCATATATATATATATATAT+GGG | - | chr6.3:35554525-35554506 | None:intergenic | 10.0% |
| !! | CTTTAATAACAAAAATAAAA+AGG | + | chr6.3:35553403-35553422 | MS.gene73697:intron | 10.0% |
| !! | TAAATTAAGATTCTTATTAT+GGG | + | chr6.3:35552946-35552965 | MS.gene73697:intron | 10.0% |
| !! | TTAAATTAAGATTCTTATTA+TGG | + | chr6.3:35552945-35552964 | MS.gene73697:intron | 10.0% |
| !!! | CTTTTTATTTTTGTTATTAA+AGG | - | chr6.3:35553405-35553424 | None:intergenic | 10.0% |
| !!! | TGTTTTATATACAAATAAAA+GGG | + | chr6.3:35552451-35552470 | MS.gene73697:intron | 10.0% |
| !! | AAATTAAGATTCTTATTATG+GGG | + | chr6.3:35552947-35552966 | MS.gene73697:intron | 15.0% |
| !! | AAGTAAGCTTAAAAATATAA+TGG | - | chr6.3:35556016-35556035 | None:intergenic | 15.0% |
| !! | ACAAAACCATATATATATAT+AGG | - | chr6.3:35554309-35554328 | None:intergenic | 15.0% |
| !! | ATATATATATATCAAATGAG+AGG | - | chr6.3:35554063-35554082 | None:intergenic | 15.0% |
| !! | ATATATCAACATTATTAAAC+AGG | - | chr6.3:35552798-35552817 | None:intergenic | 15.0% |
| !! | CAAAACCATATATATATATA+GGG | - | chr6.3:35554308-35554327 | None:intergenic | 15.0% |
| !! | CCCATATATATATATATATA+TGG | + | chr6.3:35554505-35554524 | MS.gene73697:intron | 15.0% |
| !! | CCCATATATATATATATATA+TGG | - | chr6.3:35554524-35554505 | None:intergenic | 15.0% |
| !! | CTAACAATAAAATTTATTGT+CGG | - | chr6.3:35556372-35556391 | None:intergenic | 15.0% |
| !! | CTATGAAATAAAATAAAGAA+TGG | - | chr6.3:35552378-35552397 | None:intergenic | 15.0% |
| !! | GAAGAAAAAAAAAAACAATT+GGG | + | chr6.3:35553449-35553468 | MS.gene73697:intron | 15.0% |
| !! | TAAAAATAAATTCAAAGTTG+TGG | + | chr6.3:35555330-35555349 | MS.gene73697:intron | 15.0% |
| !! | TAAAATTCAATAAAGCAAAA+GGG | - | chr6.3:35552171-35552190 | None:intergenic | 15.0% |
| !! | TGAAGAAAAAAAAAAACAAT+TGG | + | chr6.3:35553448-35553467 | MS.gene73697:intron | 15.0% |
| !!! | AAGACATAATTTCTTTTTAT+GGG | + | chr6.3:35554244-35554263 | MS.gene73697:intron | 15.0% |
| !!! | AGTAAGTATTTTCTATTAAA+CGG | - | chr6.3:35552605-35552624 | None:intergenic | 15.0% |
| !!! | CTGTTTTATATACAAATAAA+AGG | + | chr6.3:35552450-35552469 | MS.gene73697:intron | 15.0% |
| !!! | TAAAATTATAAGTTGATATG+TGG | - | chr6.3:35557259-35557278 | None:intergenic | 15.0% |
| !!! | TCTTTATTTTATTTCATAGA+TGG | + | chr6.3:35552379-35552398 | MS.gene73697:intron | 15.0% |
| !! | AAAAAAAAAAACAATTGGGT+GGG | + | chr6.3:35553453-35553472 | MS.gene73697:intron | 20.0% |
| !! | AAGAAAAAAATAGAAAGTCA+TGG | - | chr6.3:35553847-35553866 | None:intergenic | 20.0% |
| !! | AAGACATTTGAATTATTGAA+AGG | + | chr6.3:35551311-35551330 | MS.gene73697:CDS | 20.0% |
| !! | AAGTGAACTAAAAGTTAATA+AGG | + | chr6.3:35556538-35556557 | MS.gene73697:intron | 20.0% |
| !! | AAGTTAATAAATACACCTTA+AGG | - | chr6.3:35554792-35554811 | None:intergenic | 20.0% |
| !! | ACTGAAAATAAATGTAATTG+AGG | - | chr6.3:35556219-35556238 | None:intergenic | 20.0% |
| !! | AGACATTTGAATTATTGAAA+GGG | + | chr6.3:35551312-35551331 | MS.gene73697:CDS | 20.0% |
| !! | ATACATAGATAATTGAGAAA+AGG | + | chr6.3:35552655-35552674 | MS.gene73697:intron | 20.0% |
| !! | CTAAAATTCAATAAAGCAAA+AGG | - | chr6.3:35552172-35552191 | None:intergenic | 20.0% |
| !! | TAAAATACAATAAAGCAAAG+TGG | - | chr6.3:35552246-35552265 | None:intergenic | 20.0% |
| !! | TGAAACAACTATTAGAAAAA+TGG | - | chr6.3:35556457-35556476 | None:intergenic | 20.0% |
| !! | TTAATTCCATTAGTAATGTT+TGG | + | chr6.3:35551913-35551932 | MS.gene73697:intron | 20.0% |
| !!! | ATCTAATGATTTTGATCTAA+TGG | - | chr6.3:35552834-35552853 | None:intergenic | 20.0% |
| !!! | CAAAAGGATATAAAGAATTT+TGG | + | chr6.3:35555725-35555744 | MS.gene73697:CDS | 20.0% |
| !!! | CAAGACATAATTTCTTTTTA+TGG | + | chr6.3:35554243-35554262 | MS.gene73697:intron | 20.0% |
| !!! | CATTTTTTTCTTCTTGTTTT+TGG | + | chr6.3:35555456-35555475 | MS.gene73697:intron | 20.0% |
| !!! | TGTTACTTTGTTAGTTTATT+TGG | + | chr6.3:35551872-35551891 | MS.gene73697:intron | 20.0% |
| !!! | TGTTTTCTTTAATAAGTCAA+AGG | + | chr6.3:35551678-35551697 | MS.gene73697:intron | 20.0% |
| !!! | TTGTTAATGAGGTTTTAAAA+AGG | + | chr6.3:35553803-35553822 | MS.gene73697:intron | 20.0% |
| ! | AAAAAGATGATTACATGGTT+GGG | - | chr6.3:35553122-35553141 | None:intergenic | 25.0% |
| ! | AAAACCAGAAAAACATGAAA+AGG | + | chr6.3:35553646-35553665 | MS.gene73697:intron | 25.0% |
| ! | AACCATTAGATCAAAATCAA+TGG | + | chr6.3:35552921-35552940 | MS.gene73697:intron | 25.0% |
| ! | ACATAATTTGATACAGAAAG+AGG | - | chr6.3:35553334-35553353 | None:intergenic | 25.0% |
| ! | ACTCCTTCTAATAAATAAGT+GGG | + | chr6.3:35554686-35554705 | MS.gene73697:intron | 25.0% |
| ! | AGAAAAACATGAAAAGGAAA+CGG | + | chr6.3:35553652-35553671 | MS.gene73697:intron | 25.0% |
| ! | AGTGATGGTATAAACTATAA+CGG | - | chr6.3:35555987-35556006 | None:intergenic | 25.0% |
| ! | ATAAAAGACACCTTCATAAA+AGG | + | chr6.3:35554467-35554486 | MS.gene73697:intron | 25.0% |
| ! | ATAAAGTAGGCTTCTTTAAT+TGG | - | chr6.3:35557472-35557491 | None:intergenic | 25.0% |
| ! | ATAGTCGAAATTAATCTTGT+AGG | + | chr6.3:35555959-35555978 | MS.gene73697:intron | 25.0% |
| ! | ATTAAAGAAGCCTACTTTAT+TGG | + | chr6.3:35557472-35557491 | MS.gene73697:CDS | 25.0% |
| ! | ATTTGATATGCTTGATCTAA+TGG | - | chr6.3:35552860-35552879 | None:intergenic | 25.0% |
| ! | CAAGACCCTATATATATATA+TGG | + | chr6.3:35554300-35554319 | MS.gene73697:intron | 25.0% |
| ! | GAAAAAAAAAAACAATTGGG+TGG | + | chr6.3:35553452-35553471 | MS.gene73697:intron | 25.0% |
| ! | GCAAGTAAATAACTAAAAAG+TGG | - | chr6.3:35554660-35554679 | None:intergenic | 25.0% |
| ! | TACAAGATTAATTTCGACTA+TGG | - | chr6.3:35555960-35555979 | None:intergenic | 25.0% |
| ! | TACTCCTTCTAATAAATAAG+TGG | + | chr6.3:35554685-35554704 | MS.gene73697:intron | 25.0% |
| ! | TAGAGAAAAAAATCCAAATC+AGG | - | chr6.3:35556399-35556418 | None:intergenic | 25.0% |
| ! | TGTGTAGTATTAGAATGAAT+GGG | - | chr6.3:35557135-35557154 | None:intergenic | 25.0% |
| ! | TTATAGCATTATACACCTTA+AGG | + | chr6.3:35554774-35554793 | MS.gene73697:intron | 25.0% |
| ! | TTCATATGTCTCTTCAATTT+CGG | + | chr6.3:35556564-35556583 | MS.gene73697:intron | 25.0% |
| ! | TTGTGTAGTATTAGAATGAA+TGG | - | chr6.3:35557136-35557155 | None:intergenic | 25.0% |
| ! | TTTCTACTTATCAATGATAC+AGG | + | chr6.3:35556048-35556067 | MS.gene73697:intron | 25.0% |
| !! | AGCATAAACTTTTCTTATAC+CGG | - | chr6.3:35551779-35551798 | None:intergenic | 25.0% |
| !! | AGTTTTTGTCTATCAATATG+AGG | - | chr6.3:35552562-35552581 | None:intergenic | 25.0% |
| !! | CTTTTGCATTGAAAATTGTA+CGG | + | chr6.3:35554187-35554206 | MS.gene73697:intron | 25.0% |
| !! | TATGCTTTGCATATTTTACT+AGG | + | chr6.3:35555669-35555688 | MS.gene73697:intron | 25.0% |
| !! | TCTTGTGTTTTTCTATTCAT+TGG | + | chr6.3:35551834-35551853 | MS.gene73697:intron | 25.0% |
| !! | TTATTTTCTCATAGATCTGA+TGG | + | chr6.3:35553744-35553763 | MS.gene73697:intron | 25.0% |
| !! | TTGCATATTTTACTAGGAAA+TGG | + | chr6.3:35555675-35555694 | MS.gene73697:intron | 25.0% |
| !!! | ACATTTTCAATTTGAAGTGT+CGG | + | chr6.3:35555413-35555432 | MS.gene73697:intron | 25.0% |
| !!! | ATAGTTTGCTTGATTTTATG+TGG | + | chr6.3:35556418-35556437 | MS.gene73697:intron | 25.0% |
| !!! | CCTTGAATTATTTTGAGATT+CGG | + | chr6.3:35557230-35557249 | MS.gene73697:intron | 25.0% |
| !!! | GCTTTTTCTTTTCACTTTTA+TGG | + | chr6.3:35556972-35556991 | MS.gene73697:intron | 25.0% |
| !!! | GTCTTTTTCAATTCTTCTTA+TGG | + | chr6.3:35553721-35553740 | MS.gene73697:intron | 25.0% |
| !!! | GTGAAACATCATTTTAATTC+CGG | + | chr6.3:35551744-35551763 | MS.gene73697:intron | 25.0% |
| !!! | TAAGTCAGAATTTGTTAATG+AGG | + | chr6.3:35553792-35553811 | MS.gene73697:intron | 25.0% |
| !!! | TAATGAGGTTTTAAAAAGGT+TGG | + | chr6.3:35553807-35553826 | MS.gene73697:intron | 25.0% |
| !!! | TATTGAGACAAACTTGTTAA+TGG | + | chr6.3:35556262-35556281 | MS.gene73697:intron | 25.0% |
| AAAAGTGAAAATCACCCTTA+AGG | - | chr6.3:35554371-35554390 | None:intergenic | 30.0% | |
| AAAGTGAAAATCACACCTTA+AGG | + | chr6.3:35555011-35555030 | MS.gene73697:intron | 30.0% | |
| AAAGTTTATGCTTCGATAGA+AGG | + | chr6.3:35551787-35551806 | MS.gene73697:intron | 30.0% | |
| AAATGGAGTTCAAATATCCT+CGG | + | chr6.3:35556716-35556735 | MS.gene73697:intron | 30.0% | |
| AAGGTGAATTTGAAGAAGAA+AGG | + | chr6.3:35553175-35553194 | MS.gene73697:intron | 30.0% | |
| AAGTGGTTAAATACATCCTA+AGG | - | chr6.3:35554643-35554662 | None:intergenic | 30.0% | |
| AATAAAAAGGAAGTTGAGTC+TGG | + | chr6.3:35553416-35553435 | MS.gene73697:intron | 30.0% | |
| AATAAAACTATCTCAACCGT+TGG | + | chr6.3:35553965-35553984 | MS.gene73697:intron | 30.0% | |
| AATAACGTGAAGAAGACTAT+GGG | - | chr6.3:35553001-35553020 | None:intergenic | 30.0% | |
| ACAATATGGTAACATCATGA+TGG | + | chr6.3:35555835-35555854 | MS.gene73697:CDS | 30.0% | |
| ACACCCACTTATTTATTAGA+AGG | - | chr6.3:35554692-35554711 | None:intergenic | 30.0% | |
| ACACCTTCATAAAAGTAAGT+TGG | + | chr6.3:35554412-35554431 | MS.gene73697:intron | 30.0% | |
| ACACCTTCATAAAAGTAAGT+TGG | - | chr6.3:35554431-35554412 | None:intergenic | 30.0% | |
| ACCTTCTAACAAAAACAAGT+GGG | - | chr6.3:35554751-35554770 | None:intergenic | 30.0% | |
| ACGAAGTTGACAAAAAGAAA+TGG | - | chr6.3:35557176-35557195 | None:intergenic | 30.0% | |
| ACTTATGTGCTTGAAATTTG+AGG | - | chr6.3:35556522-35556541 | None:intergenic | 30.0% | |
| AGAAAGAGACAAAGAAAAAC+AGG | + | chr6.3:35555202-35555221 | MS.gene73697:intron | 30.0% | |
| ATAAAAGACACCTTCACAAA+AGG | - | chr6.3:35554914-35554933 | None:intergenic | 30.0% | |
| ATATAATGGTACGTTAGTGA+TGG | - | chr6.3:35556002-35556021 | None:intergenic | 30.0% | |
| ATTACATTAGACTTGTGGAT+GGG | + | chr6.3:35552104-35552123 | MS.gene73697:intron | 30.0% | |
| CAAAAAGATGCAATCTTTGA+AGG | + | chr6.3:35553247-35553266 | MS.gene73697:intron | 30.0% | |
| CAATAGTGTTTGGTATTGTT+TGG | - | chr6.3:35552527-35552546 | None:intergenic | 30.0% | |
| CAGGATGAAAAATAATGAAG+AGG | + | chr6.3:35553590-35553609 | MS.gene73697:intron | 30.0% | |
| CATAGATAATTGAGAAAAGG+TGG | + | chr6.3:35552658-35552677 | MS.gene73697:intron | 30.0% | |
| CCGAATCTCAAAATAATTCA+AGG | - | chr6.3:35557233-35557252 | None:intergenic | 30.0% | |
| CTATCAACGAAGATATTTCA+GGG | - | chr6.3:35555516-35555535 | None:intergenic | 30.0% | |
| CTTATGTGCTTGAAATTTGA+GGG | - | chr6.3:35556521-35556540 | None:intergenic | 30.0% | |
| GAAAAAGATGATTACATGGT+TGG | - | chr6.3:35553123-35553142 | None:intergenic | 30.0% | |
| GATCTATTGTCATGTTATCA+TGG | - | chr6.3:35555154-35555173 | None:intergenic | 30.0% | |
| TAAAAGTTTATGCTCGCAAA+AGG | + | chr6.3:35555709-35555728 | MS.gene73697:CDS | 30.0% | |
| TATACATACTTGAGTTCAGA+AGG | + | chr6.3:35556319-35556338 | MS.gene73697:CDS | 30.0% | |
| TATTGTTAGAGATCCTGATT+TGG | + | chr6.3:35556383-35556402 | MS.gene73697:intron | 30.0% | |
| TCAGAAGAAAATCAAGAGAT+TGG | + | chr6.3:35555794-35555813 | MS.gene73697:CDS | 30.0% | |
| TCCAGAACATAAAAATCATG+AGG | + | chr6.3:35553888-35553907 | MS.gene73697:intron | 30.0% | |
| TCCATTAGTAATGTTTGGTT+CGG | + | chr6.3:35551918-35551937 | MS.gene73697:intron | 30.0% | |
| TCTTAAAATGAGAGATGAGA+GGG | + | chr6.3:35552889-35552908 | MS.gene73697:intron | 30.0% | |
| TGATGATTACATTAGACTTG+TGG | + | chr6.3:35552099-35552118 | MS.gene73697:intron | 30.0% | |
| TGTATGAGCAATTCATTTAC+CGG | - | chr6.3:35556188-35556207 | None:intergenic | 30.0% | |
| TGTCACAATGATCTACAATA+TGG | + | chr6.3:35555821-35555840 | MS.gene73697:CDS | 30.0% | |
| TTACCCTTAAGTAACTGAAA+AGG | - | chr6.3:35555313-35555332 | None:intergenic | 30.0% | |
| TTCAAAATAGATACACAGCA+GGG | - | chr6.3:35557105-35557124 | None:intergenic | 30.0% | |
| TTGGGAAAAAGATGATTACA+TGG | - | chr6.3:35553127-35553146 | None:intergenic | 30.0% | |
| TTTAACAAGTCACACCTTAA+GGG | + | chr6.3:35554354-35554373 | MS.gene73697:intron | 30.0% | |
| ! | AATGACAAATCAGGTTTTTG+AGG | + | chr6.3:35551442-35551461 | MS.gene73697:CDS | 30.0% |
| ! | AGAACCAAAGAAAAGCTTTT+TGG | - | chr6.3:35552196-35552215 | None:intergenic | 30.0% |
| ! | ATAGAAGACACCTTTTATGA+AGG | - | chr6.3:35554480-35554499 | None:intergenic | 30.0% |
| ! | CAAAGATTGCATCTTTTTGA+GGG | - | chr6.3:35553246-35553265 | None:intergenic | 30.0% |
| ! | GTATTTTCTATTAAACGGAG+AGG | - | chr6.3:35552600-35552619 | None:intergenic | 30.0% |
| ! | GTTCCTTTTCAGTTACTTAA+GGG | + | chr6.3:35555307-35555326 | MS.gene73697:intron | 30.0% |
| ! | GTTTCCTTTTCATGTTTTTC+TGG | - | chr6.3:35553653-35553672 | None:intergenic | 30.0% |
| ! | TAAAGAGTGCATAAACATCT+TGG | - | chr6.3:35556786-35556805 | None:intergenic | 30.0% |
| ! | TACAATTGACTTTGACTACA+AGG | + | chr6.3:35557418-35557437 | MS.gene73697:CDS | 30.0% |
| ! | TAGTCCAAAAAGCTTTTCTT+TGG | + | chr6.3:35552189-35552208 | MS.gene73697:intron | 30.0% |
| ! | TCAAAGATTGCATCTTTTTG+AGG | - | chr6.3:35553247-35553266 | None:intergenic | 30.0% |
| ! | TCCTCATGATTTTTATGTTC+TGG | - | chr6.3:35553892-35553911 | None:intergenic | 30.0% |
| ! | TCTTGCAAACCATCTATTTT+GGG | + | chr6.3:35556925-35556944 | MS.gene73697:CDS | 30.0% |
| ! | TGTTCCTTTTCAGTTACTTA+AGG | + | chr6.3:35555306-35555325 | MS.gene73697:intron | 30.0% |
| ! | TTTAATTGTAACTTGTACGC+AGG | + | chr6.3:35556845-35556864 | MS.gene73697:intron | 30.0% |
| ! | TTTTAACAAGTCACACCTTA+AGG | + | chr6.3:35554353-35554372 | MS.gene73697:intron | 30.0% |
| ! | TTTTATCAAGCAACACCTTA+AGG | - | chr6.3:35555029-35555048 | None:intergenic | 30.0% |
| !! | ACACCAACTTACTTTTATGA+AGG | + | chr6.3:35554963-35554982 | MS.gene73697:intron | 30.0% |
| !! | ACACCAACTTACTTTTATGA+AGG | - | chr6.3:35554982-35554963 | None:intergenic | 30.0% |
| !! | CTCTTCATTATTTTTCATCC+TGG | - | chr6.3:35553592-35553611 | None:intergenic | 30.0% |
| !! | GAAAAATGCTTAGCTTTGAA+AGG | + | chr6.3:35552334-35552353 | MS.gene73697:intron | 30.0% |
| !! | GTTGCAAATTTTAACCCATA+TGG | + | chr6.3:35553197-35553216 | MS.gene73697:intron | 30.0% |
| !!! | AGCCATTGATTTTGATCTAA+TGG | - | chr6.3:35552926-35552945 | None:intergenic | 30.0% |
| !!! | GGATATAAAGAATTTTGGCT+TGG | + | chr6.3:35555730-35555749 | MS.gene73697:CDS | 30.0% |
| AAAAAAAACAATTGGGTGGG+TGG | + | chr6.3:35553456-35553475 | MS.gene73697:intron | 35.0% | |
| AAAAAAACAATTGGGTGGGT+GGG | + | chr6.3:35553457-35553476 | MS.gene73697:intron | 35.0% | |
| AAACAGGAGAAAGACTTGAT+TGG | - | chr6.3:35552782-35552801 | None:intergenic | 35.0% | |
| AACAGGAGAAAGACTTGATT+GGG | - | chr6.3:35552781-35552800 | None:intergenic | 35.0% | |
| AATCATGAGGAAGAAGTGAA+AGG | + | chr6.3:35553901-35553920 | MS.gene73697:intron | 35.0% | |
| AATTGAAACAGGGGTTGTTT+GGG | - | chr6.3:35553145-35553164 | None:intergenic | 35.0% | |
| ACCGAACCAAACATTACTAA+TGG | - | chr6.3:35551922-35551941 | None:intergenic | 35.0% | |
| ACGTGAATCCAATTGAAACA+GGG | - | chr6.3:35553155-35553174 | None:intergenic | 35.0% | |
| ACTCCCACATAAAAACTAGT+GGG | + | chr6.3:35554834-35554853 | MS.gene73697:intron | 35.0% | |
| ACTCCCACATAAAAACTAGT+GGG | - | chr6.3:35554853-35554834 | None:intergenic | 35.0% | |
| ACTGAAAAGGAACATGAACT+TGG | - | chr6.3:35555300-35555319 | None:intergenic | 35.0% | |
| AGCCATTAGATCTAAACCAA+CGG | - | chr6.3:35553984-35554003 | None:intergenic | 35.0% | |
| AGGAGTTGTTATCAAATGAG+AGG | - | chr6.3:35554043-35554062 | None:intergenic | 35.0% | |
| AGTTCAAATATCCTCGGAAA+CGG | + | chr6.3:35556722-35556741 | MS.gene73697:intron | 35.0% | |
| ATCATGAGGAAGAAGTGAAA+GGG | + | chr6.3:35553902-35553921 | MS.gene73697:intron | 35.0% | |
| ATGCTTAAACAATGCCCTTA+GGG | - | chr6.3:35554154-35554173 | None:intergenic | 35.0% | |
| ATTGCATCTTGTTAGCCATA+TGG | - | chr6.3:35553215-35553234 | None:intergenic | 35.0% | |
| ATTTGTCATTGCACCCTTTA+AGG | - | chr6.3:35551432-35551451 | None:intergenic | 35.0% | |
| CACCTTCTAACAAAAACAAG+TGG | - | chr6.3:35554752-35554771 | None:intergenic | 35.0% | |
| CTCAAAATAATTCAAGGCTC+AGG | - | chr6.3:35557227-35557246 | None:intergenic | 35.0% | |
| CTCTTAAAATGAGAGATGAG+AGG | + | chr6.3:35552888-35552907 | MS.gene73697:intron | 35.0% | |
| CTTGACTACAGTAAATATCC+CGG | + | chr6.3:35556166-35556185 | MS.gene73697:CDS | 35.0% | |
| GAATAACGTGAAGAAGACTA+TGG | - | chr6.3:35553002-35553021 | None:intergenic | 35.0% | |
| GAATCATTTCTGTGAAATGG+CGG | + | chr6.3:35556114-35556133 | MS.gene73697:CDS | 35.0% | |
| GACCTTGTAACTTCAACAAA+TGG | + | chr6.3:35556699-35556718 | MS.gene73697:intron | 35.0% | |
| GATCAAGCATATCAAATGAG+AGG | + | chr6.3:35552863-35552882 | MS.gene73697:intron | 35.0% | |
| GATTACATTAGACTTGTGGA+TGG | + | chr6.3:35552103-35552122 | MS.gene73697:intron | 35.0% | |
| GCTATCAACGAAGATATTTC+AGG | - | chr6.3:35555517-35555536 | None:intergenic | 35.0% | |
| GTATGAGCAATTCATTTACC+GGG | - | chr6.3:35556187-35556206 | None:intergenic | 35.0% | |
| GTTCAAAATAGATACACAGC+AGG | - | chr6.3:35557106-35557125 | None:intergenic | 35.0% | |
| GTTTCAATTGGATTCACGTA+AGG | + | chr6.3:35553156-35553175 | MS.gene73697:intron | 35.0% | |
| TACGTGAATCCAATTGAAAC+AGG | - | chr6.3:35553156-35553175 | None:intergenic | 35.0% | |
| TGATAAAAGACACCACCAAA+GGG | + | chr6.3:35555041-35555060 | MS.gene73697:intron | 35.0% | |
| TGCGAATCATTTCTGTGAAA+TGG | + | chr6.3:35556111-35556130 | MS.gene73697:CDS | 35.0% | |
| TGTGCTTAAGCTAAATGGAA+AGG | + | chr6.3:35553927-35553946 | MS.gene73697:intron | 35.0% | |
| TTAATTCCGGTACAAGATTC+CGG | + | chr6.3:35551757-35551776 | MS.gene73697:intron | 35.0% | |
| TTACTGTAGTCAAGAACATG+AGG | - | chr6.3:35556160-35556179 | None:intergenic | 35.0% | |
| TTCCACAACTCAATAGTGTT+TGG | - | chr6.3:35552537-35552556 | None:intergenic | 35.0% | |
| TTCCTTAAACAATGCCCTTA+GGG | + | chr6.3:35554267-35554286 | MS.gene73697:intron | 35.0% | |
| TTGAAGAGTTCATTCATGCT+CGG | + | chr6.3:35551633-35551652 | MS.gene73697:CDS | 35.0% | |
| TTGATAAAAGACACCACCAA+AGG | + | chr6.3:35555040-35555059 | MS.gene73697:intron | 35.0% | |
| TTGCATCTTGTTAGCCATAT+GGG | - | chr6.3:35553214-35553233 | None:intergenic | 35.0% | |
| TTTCACAATCTTCATATGCC+TGG | + | chr6.3:35555553-35555572 | MS.gene73697:CDS | 35.0% | |
| TTTCACAGAAATGATTCGCA+AGG | - | chr6.3:35556111-35556130 | None:intergenic | 35.0% | |
| TTTGAGTGTATGTCGAAGAA+TGG | + | chr6.3:35551569-35551588 | MS.gene73697:CDS | 35.0% | |
| TTTGTCATTGCACCCTTTAA+GGG | - | chr6.3:35551431-35551450 | None:intergenic | 35.0% | |
| ! | AGTTGAGGTTTTCTTCGATA+GGG | + | chr6.3:35551529-35551548 | MS.gene73697:CDS | 35.0% |
| ! | ATAGAAGACACCTTTTGTGA+AGG | + | chr6.3:35554901-35554920 | MS.gene73697:intron | 35.0% |
| ! | ATGCAATCTTTGAAGGTGAT+CGG | + | chr6.3:35553254-35553273 | MS.gene73697:intron | 35.0% |
| ! | CAATACATTCGATTCGTATC+TGG | + | chr6.3:35557045-35557064 | MS.gene73697:intron | 35.0% |
| ! | CTCCATTTGTTGAAGTTACA+AGG | - | chr6.3:35556704-35556723 | None:intergenic | 35.0% |
| ! | CTCTCATCTCTCATTTTAAG+AGG | - | chr6.3:35552890-35552909 | None:intergenic | 35.0% |
| ! | CTCTTGCAAACCATCTATTT+TGG | + | chr6.3:35556924-35556943 | MS.gene73697:CDS | 35.0% |
| ! | CTTGCAAACCATCTATTTTG+GGG | + | chr6.3:35556926-35556945 | MS.gene73697:CDS | 35.0% |
| ! | TACCAAACACTATTGAGTTG+TGG | + | chr6.3:35552532-35552551 | MS.gene73697:intron | 35.0% |
| ! | TTGATTGGGCATAAGCTTTT+GGG | - | chr6.3:35552767-35552786 | None:intergenic | 35.0% |
| ! | TTTTGTTACAAGCCACCTTT+TGG | + | chr6.3:35554323-35554342 | MS.gene73697:intron | 35.0% |
| !! | AACCGTTGGTTTAGATCTAA+TGG | + | chr6.3:35553979-35553998 | MS.gene73697:intron | 35.0% |
| !! | GTTTTAGCAAGTTACACCTT+AGG | + | chr6.3:35554624-35554643 | MS.gene73697:intron | 35.0% |
| !!! | ACACCCACTAGTTTTTATGT+GGG | + | chr6.3:35554598-35554617 | MS.gene73697:intron | 35.0% |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr6.3:35554617-35554598 | None:intergenic | 35.0% |
| !!! | ACCCACTTGTTTTTGTTAGA+AGG | + | chr6.3:35554747-35554766 | MS.gene73697:intron | 35.0% |
| !!! | AGGGTTTTGGTTCGATTATA+TGG | + | chr6.3:35551500-35551519 | MS.gene73697:CDS | 35.0% |
| !!! | ATCAGGTTTTTGAGGTGAAT+TGG | + | chr6.3:35551450-35551469 | MS.gene73697:CDS | 35.0% |
| AAAAAACAATTGGGTGGGTG+GGG | + | chr6.3:35553458-35553477 | MS.gene73697:intron | 40.0% | |
| AAAAGGTTGGAGAAAGAGAG+AGG | + | chr6.3:35553820-35553839 | MS.gene73697:intron | 40.0% | |
| AAATCCTACAGGCATTTGCT+AGG | - | chr6.3:35554717-35554736 | None:intergenic | 40.0% | |
| AAATGCTAACAAGTGCCCTA+AGG | + | chr6.3:35554136-35554155 | MS.gene73697:intron | 40.0% | |
| AATGAAAGTTCTTGCAGCTG+TGG | + | chr6.3:35551355-35551374 | MS.gene73697:CDS | 40.0% | |
| AATGCTAACAAGTGCCCTAA+GGG | + | chr6.3:35554137-35554156 | MS.gene73697:intron | 40.0% | |
| ACATGAAAAGGAAACGGAAG+AGG | + | chr6.3:35553658-35553677 | MS.gene73697:intron | 40.0% | |
| ACGAAGATATTTCAGGGTTG+CGG | - | chr6.3:35555510-35555529 | None:intergenic | 40.0% | |
| AGAGGAGTTGTTAACATGAG+AGG | - | chr6.3:35554025-35554044 | None:intergenic | 40.0% | |
| AGCTTCACATCAGATAAGGA+AGG | - | chr6.3:35556623-35556642 | None:intergenic | 40.0% | |
| ATTATATGGCGAAGGAGTTG+AGG | + | chr6.3:35551514-35551533 | MS.gene73697:CDS | 40.0% | |
| CAAACAACCCCTGTTTCAAT+TGG | + | chr6.3:35553144-35553163 | MS.gene73697:intron | 40.0% | |
| CAATTGAAACAGGGGTTGTT+TGG | - | chr6.3:35553146-35553165 | None:intergenic | 40.0% | |
| CACTCCCACATAAAAACTAG+TGG | + | chr6.3:35554833-35554852 | MS.gene73697:intron | 40.0% | |
| CACTCCCACATAAAAACTAG+TGG | - | chr6.3:35554852-35554833 | None:intergenic | 40.0% | |
| CAGGAAGGGTTCAAATACAA+GGG | + | chr6.3:35553512-35553531 | MS.gene73697:intron | 40.0% | |
| CATAACTCTGCAACACACAA+AGG | - | chr6.3:35557394-35557413 | None:intergenic | 40.0% | |
| CGTGAATCCAATTGAAACAG+GGG | - | chr6.3:35553154-35553173 | None:intergenic | 40.0% | |
| CTAAATGCATGTGTTCGGTA+TGG | + | chr6.3:35557020-35557039 | MS.gene73697:intron | 40.0% | |
| CTTATACCGGAATCTTGTAC+CGG | - | chr6.3:35551766-35551785 | None:intergenic | 40.0% | |
| CTTGAAATTTGAGGGTGACA+GGG | - | chr6.3:35556513-35556532 | None:intergenic | 40.0% | |
| GAGGAGTTGTTAACATGAGA+GGG | - | chr6.3:35554024-35554043 | None:intergenic | 40.0% | |
| GATGCTTAAACAATGCCCTT+AGG | - | chr6.3:35554155-35554174 | None:intergenic | 40.0% | |
| GCGTGAATTTGTCAGTGAAA+TGG | - | chr6.3:35556350-35556369 | None:intergenic | 40.0% | |
| GCGTTTCATACATGAATCAG+TGG | + | chr6.3:35553480-35553499 | MS.gene73697:intron | 40.0% | |
| GTCAGCTAAATGCATGTGTT+CGG | + | chr6.3:35557015-35557034 | MS.gene73697:intron | 40.0% | |
| GTTCCTTAAACAATGCCCTT+AGG | + | chr6.3:35554266-35554285 | MS.gene73697:intron | 40.0% | |
| GTTGAGGTGAATCCCTTAAA+GGG | + | chr6.3:35551416-35551435 | MS.gene73697:CDS | 40.0% | |
| TAATGAAGAGGAGACTGAAG+AGG | + | chr6.3:35553602-35553621 | MS.gene73697:intron | 40.0% | |
| TAATGGTCTACCAGATCTTG+AGG | + | chr6.3:35556279-35556298 | MS.gene73697:intron | 40.0% | |
| TGAAGAGTTCATTCATGCTC+GGG | + | chr6.3:35551634-35551653 | MS.gene73697:CDS | 40.0% | |
| TGTATGTCGAAGAATGGACA+GGG | + | chr6.3:35551575-35551594 | MS.gene73697:CDS | 40.0% | |
| TGTGTTCTAGCAAATCCTAC+AGG | - | chr6.3:35554728-35554747 | None:intergenic | 40.0% | |
| TGTTAAAAGACACCGCCAAA+AGG | - | chr6.3:35554341-35554360 | None:intergenic | 40.0% | |
| TGTTGAGGTGAATCCCTTAA+AGG | + | chr6.3:35551415-35551434 | MS.gene73697:CDS | 40.0% | |
| TTATGTTACAAGCCACCCTT+TGG | - | chr6.3:35555059-35555078 | None:intergenic | 40.0% | |
| TTGACTACAAGGAGTTCTCA+AGG | + | chr6.3:35557429-35557448 | MS.gene73697:CDS | 40.0% | |
| ! | AAAGGGTGCAATGACAAATC+AGG | + | chr6.3:35551433-35551452 | MS.gene73697:CDS | 40.0% |
| ! | AGCTAGCTTCACATCAGATA+AGG | - | chr6.3:35556627-35556646 | None:intergenic | 40.0% |
| ! | CTTGATTGGGCATAAGCTTT+TGG | - | chr6.3:35552768-35552787 | None:intergenic | 40.0% |
| ! | GAGTTGAGGTTTTCTTCGAT+AGG | + | chr6.3:35551528-35551547 | MS.gene73697:CDS | 40.0% |
| ! | TGATGATGTGAGTACTGTTG+AGG | + | chr6.3:35551400-35551419 | MS.gene73697:CDS | 40.0% |
| ! | TGTTCTGGATATCTCACATC+AGG | - | chr6.3:35553877-35553896 | None:intergenic | 40.0% |
| ! | TTGGTTCGATTATATGGCGA+AGG | + | chr6.3:35551506-35551525 | MS.gene73697:CDS | 40.0% |
| !!! | CACACCCACTAGTTTTTATG+TGG | + | chr6.3:35554597-35554616 | MS.gene73697:intron | 40.0% |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | chr6.3:35554616-35554597 | None:intergenic | 40.0% |
| AAAAGGAAACGGAAGAGGCA+GGG | + | chr6.3:35553663-35553682 | MS.gene73697:intron | 45.0% | |
| AAAGCCAAGTGATGCTGAAG+TGG | + | chr6.3:35556871-35556890 | MS.gene73697:CDS | 45.0% | |
| AAAGTGGCGGTCATGTTAGA+AGG | + | chr6.3:35551480-35551499 | MS.gene73697:CDS | 45.0% | |
| AAGAGGAGACTGAAGAGGAA+GGG | + | chr6.3:35553607-35553626 | MS.gene73697:intron | 45.0% | |
| AAGATATTTCAGGGTTGCGG+AGG | - | chr6.3:35555507-35555526 | None:intergenic | 45.0% | |
| AAGTGGCGGTCATGTTAGAA+GGG | + | chr6.3:35551481-35551500 | MS.gene73697:CDS | 45.0% | |
| ATCCATGTGACTTGACAGAG+AGG | + | chr6.3:35553559-35553578 | MS.gene73697:intron | 45.0% | |
| CCAGGAAGGGTTCAAATACA+AGG | + | chr6.3:35553511-35553530 | MS.gene73697:intron | 45.0% | |
| CCTTGTATTTGAACCCTTCC+TGG | - | chr6.3:35553514-35553533 | None:intergenic | 45.0% | |
| CTTGCTAACAAGTGCCCTAA+GGG | - | chr6.3:35554284-35554303 | None:intergenic | 45.0% | |
| GCTTGAAATTTGAGGGTGAC+AGG | - | chr6.3:35556514-35556533 | None:intergenic | 45.0% | |
| GGATCAGTTAGCGAATCTTG+TGG | + | chr6.3:35556892-35556911 | MS.gene73697:CDS | 45.0% | |
| GTATCCTAGCAAATGCCTGT+AGG | + | chr6.3:35554710-35554729 | MS.gene73697:intron | 45.0% | |
| GTGTATGTCGAAGAATGGAC+AGG | + | chr6.3:35551574-35551593 | MS.gene73697:CDS | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | + | chr6.3:35555044-35555063 | MS.gene73697:intron | 45.0% | |
| TAAAAGACACCGCCAAAAGG+TGG | - | chr6.3:35554338-35554357 | None:intergenic | 45.0% | |
| TCATATGCCTGGTGCAAAGA+AGG | + | chr6.3:35555564-35555583 | MS.gene73697:CDS | 45.0% | |
| TCGCAAGGTCAAATGCAACT+GGG | - | chr6.3:35556096-35556115 | None:intergenic | 45.0% | |
| TCTTGCTAACAAGTGCCCTA+AGG | - | chr6.3:35554285-35554304 | None:intergenic | 45.0% | |
| TGACAGAGAGGAAGAAAACC+AGG | + | chr6.3:35553571-35553590 | MS.gene73697:intron | 45.0% | |
| TGATCCACTTCAGCATCACT+TGG | - | chr6.3:35556878-35556897 | None:intergenic | 45.0% | |
| TGTTAACATGAGAGGGTGAG+AGG | - | chr6.3:35554017-35554036 | None:intergenic | 45.0% | |
| TTCCTCTCTGTCAAGTCACA+TGG | - | chr6.3:35553564-35553583 | None:intergenic | 45.0% | |
| TTCGCAAGGTCAAATGCAAC+TGG | - | chr6.3:35556097-35556116 | None:intergenic | 45.0% | |
| ! | AGCTTTTGGGCACATGACTT+AGG | - | chr6.3:35552754-35552773 | None:intergenic | 45.0% |
| ! | CGGTCATGTTAGAAGGGTTT+TGG | + | chr6.3:35551487-35551506 | MS.gene73697:CDS | 45.0% |
| ! | TGTTACAAGCCACCTTTTGG+CGG | + | chr6.3:35554326-35554345 | MS.gene73697:intron | 45.0% |
| ! | TTGAACCCTTCCTGGTGTTA+TGG | - | chr6.3:35553506-35553525 | None:intergenic | 45.0% |
| ! | TTGGCAGAGAATGAGGTACT+AGG | + | chr6.3:35555594-35555613 | MS.gene73697:intron | 45.0% |
| !! | GCTATTTTCAACCGTTTCCG+AGG | - | chr6.3:35556736-35556755 | None:intergenic | 45.0% |
| !! | GCTTAGCTTTGAAAGGCTTC+TGG | + | chr6.3:35552341-35552360 | MS.gene73697:intron | 45.0% |
| !! | TGCCCTAAGGGCATTGTTTA+AGG | - | chr6.3:35554168-35554149 | None:intergenic | 45.0% |
| !!! | ACCATCTATTTTGGGGCTTG+TGG | + | chr6.3:35556933-35556952 | MS.gene73697:CDS | 45.0% |
| !!! | CATCTATTTTGGGGCTTGTG+GGG | + | chr6.3:35556935-35556954 | MS.gene73697:CDS | 45.0% |
| !!! | CCATCTATTTTGGGGCTTGT+GGG | + | chr6.3:35556934-35556953 | MS.gene73697:CDS | 45.0% |
| !!! | TGGTTCGGTTTTTCGATGTG+TGG | + | chr6.3:35551933-35551952 | MS.gene73697:intron | 45.0% |
| !!! | AAAAAATTAAAAATATCTTT+TGG | + | chr6.3:35552034-35552053 | MS.gene73697:intron | 5.0% |
| AATTGGCCGACGAAAAGTGG+CGG | + | chr6.3:35551467-35551486 | MS.gene73697:CDS | 50.0% | |
| ACAAGGAGTTCTCAAGGCAG+AGG | + | chr6.3:35557435-35557454 | MS.gene73697:CDS | 50.0% | |
| AGAGGAGACTGAAGAGGAAG+GGG | + | chr6.3:35553608-35553627 | MS.gene73697:intron | 50.0% | |
| AGTGGCCATAACACCAGGAA+GGG | + | chr6.3:35553498-35553517 | MS.gene73697:intron | 50.0% | |
| CCCACAAGCCCCAAAATAGA+TGG | - | chr6.3:35556937-35556956 | None:intergenic | 50.0% | |
| GAAAAGGAAACGGAAGAGGC+AGG | + | chr6.3:35553662-35553681 | MS.gene73697:intron | 50.0% | |
| GAAGAGGAGACTGAAGAGGA+AGG | + | chr6.3:35553606-35553625 | MS.gene73697:intron | 50.0% | |
| GAATCAGTGGCCATAACACC+AGG | + | chr6.3:35553493-35553512 | MS.gene73697:intron | 50.0% | |
| GCAGCTGTGGCTGTAGATTT+AGG | + | chr6.3:35551368-35551387 | MS.gene73697:CDS | 50.0% | |
| GGGCGTGTGCTTAAGCTAAA+TGG | + | chr6.3:35553922-35553941 | MS.gene73697:intron | 50.0% | |
| GTCAAGAACATGAGGCGTGT+CGG | - | chr6.3:35556152-35556171 | None:intergenic | 50.0% | |
| GTGAATTGGCCGACGAAAAG+TGG | + | chr6.3:35551464-35551483 | MS.gene73697:CDS | 50.0% | |
| TGTTACAAGCCACCCTTTGG+TGG | - | chr6.3:35555056-35555075 | None:intergenic | 50.0% | |
| ! | CTTCTTGGTCGGTTCACTAC+TGG | + | chr6.3:35551605-35551624 | MS.gene73697:CDS | 50.0% |
| ! | GTCTAGAGTCTGACAACGAC+TGG | - | chr6.3:35555393-35555412 | None:intergenic | 50.0% |
| !!! | ACATGACCGCCACTTTTCGT+CGG | - | chr6.3:35551476-35551495 | None:intergenic | 50.0% |
| AGACTGAAGAGGAAGGGGCA+CGG | + | chr6.3:35553613-35553632 | MS.gene73697:intron | 55.0% | |
| CAGTGGCCATAACACCAGGA+AGG | + | chr6.3:35553497-35553516 | MS.gene73697:intron | 55.0% | |
| CTTCGACGCTCCTCAAGATC+TGG | - | chr6.3:35556292-35556311 | None:intergenic | 55.0% | |
| GTGAACCGACCAAGAAGTCG+CGG | - | chr6.3:35551602-35551621 | None:intergenic | 55.0% | |
| !! | CAGATCTTGAGGAGCGTCGA+AGG | + | chr6.3:35556290-35556309 | MS.gene73697:intron | 55.0% |
| AGGGTCCGCGACTTCTTGGT+CGG | + | chr6.3:35551594-35551613 | MS.gene73697:CDS | 60.0% | |
| ! | AAGAGGAAGGGGCACGGACA+TGG | + | chr6.3:35553619-35553638 | MS.gene73697:intron | 60.0% |
| ! | AGAGGAAGGGGCACGGACAT+GGG | + | chr6.3:35553620-35553639 | MS.gene73697:intron | 60.0% |
| ! | GAACATGAGGCGTGTCGGTG+TGG | - | chr6.3:35556147-35556166 | None:intergenic | 60.0% |
| GGACAGGGTCCGCGACTTCT+TGG | + | chr6.3:35551590-35551609 | MS.gene73697:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 35551290 | 35557499 | 35551290 | ID=MS.gene73697 |
| chr6.3 | mRNA | 35551290 | 35557499 | 35551290 | ID=MS.gene73697.t1;Parent=MS.gene73697 |
| chr6.3 | exon | 35551290 | 35551655 | 35551290 | ID=MS.gene73697.t1.exon1;Parent=MS.gene73697.t1 |
| chr6.3 | CDS | 35551290 | 35551655 | 35551290 | ID=cds.MS.gene73697.t1;Parent=MS.gene73697.t1 |
| chr6.3 | exon | 35555487 | 35555608 | 35555487 | ID=MS.gene73697.t1.exon2;Parent=MS.gene73697.t1 |
| chr6.3 | CDS | 35555487 | 35555608 | 35555487 | ID=cds.MS.gene73697.t1;Parent=MS.gene73697.t1 |
| chr6.3 | exon | 35555691 | 35555886 | 35555691 | ID=MS.gene73697.t1.exon3;Parent=MS.gene73697.t1 |
| chr6.3 | CDS | 35555691 | 35555886 | 35555691 | ID=cds.MS.gene73697.t1;Parent=MS.gene73697.t1 |
| chr6.3 | exon | 35556070 | 35556187 | 35556070 | ID=MS.gene73697.t1.exon4;Parent=MS.gene73697.t1 |
| chr6.3 | CDS | 35556070 | 35556187 | 35556070 | ID=cds.MS.gene73697.t1;Parent=MS.gene73697.t1 |
| chr6.3 | exon | 35556293 | 35556340 | 35556293 | ID=MS.gene73697.t1.exon5;Parent=MS.gene73697.t1 |
| chr6.3 | CDS | 35556293 | 35556340 | 35556293 | ID=cds.MS.gene73697.t1;Parent=MS.gene73697.t1 |
| chr6.3 | exon | 35556867 | 35556967 | 35556867 | ID=MS.gene73697.t1.exon6;Parent=MS.gene73697.t1 |
| chr6.3 | CDS | 35556867 | 35556967 | 35556867 | ID=cds.MS.gene73697.t1;Parent=MS.gene73697.t1 |
| chr6.3 | exon | 35557407 | 35557499 | 35557407 | ID=MS.gene73697.t1.exon7;Parent=MS.gene73697.t1 |
| chr6.3 | CDS | 35557407 | 35557499 | 35557407 | ID=cds.MS.gene73697.t1;Parent=MS.gene73697.t1 |
| Gene Sequence |
| Protein sequence |
