Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73752.t1 | XP_003624375.3 | 76.5 | 251 | 58 | 1 | 1 | 251 | 872 | 1121 | 1.20E-107 | 399.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73752.t1 | Q3ECH2 | 36.4 | 228 | 117 | 8 | 27 | 246 | 26 | 233 | 1.0e-30 | 135.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73752.t1 | G7KV63 | 76.5 | 251 | 58 | 1 | 1 | 251 | 1 | 250 | 8.9e-108 | 399.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73752 | MS.gene004177 | PPI |
| MS.gene047363 | MS.gene73752 | PPI |
| MS.gene002507 | MS.gene73752 | PPI |
| MS.gene01481 | MS.gene73752 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73752.t1 | MTR_7g082540 | 76.494 | 251 | 58 | 1 | 1 | 251 | 1 | 250 | 6.00e-137 | 386 |
| MS.gene73752.t1 | MTR_7g082390 | 78.008 | 241 | 52 | 1 | 7 | 247 | 10 | 249 | 9.65e-134 | 378 |
| MS.gene73752.t1 | MTR_7g082533 | 36.017 | 236 | 133 | 6 | 32 | 251 | 36 | 269 | 4.33e-43 | 148 |
| MS.gene73752.t1 | MTR_7g082537 | 31.076 | 251 | 148 | 10 | 2 | 238 | 7 | 246 | 2.75e-29 | 111 |
| MS.gene73752.t1 | MTR_6g082940 | 30.000 | 260 | 159 | 9 | 1 | 239 | 1 | 258 | 8.37e-29 | 112 |
| MS.gene73752.t1 | MTR_6g082920 | 30.000 | 260 | 159 | 9 | 1 | 239 | 1 | 258 | 8.37e-29 | 112 |
| MS.gene73752.t1 | MTR_6g082820 | 28.571 | 252 | 152 | 9 | 10 | 239 | 13 | 258 | 5.71e-28 | 108 |
| MS.gene73752.t1 | MTR_6g083000 | 29.811 | 265 | 160 | 10 | 1 | 242 | 1 | 262 | 2.59e-27 | 108 |
| MS.gene73752.t1 | MTR_7g082530 | 33.188 | 229 | 143 | 7 | 27 | 246 | 31 | 258 | 1.45e-26 | 108 |
| MS.gene73752.t1 | MTR_7g082530 | 33.188 | 229 | 143 | 7 | 27 | 246 | 31 | 258 | 1.60e-26 | 108 |
| MS.gene73752.t1 | MTR_7g082460 | 28.352 | 261 | 157 | 9 | 14 | 253 | 21 | 272 | 2.52e-26 | 107 |
| MS.gene73752.t1 | MTR_8g104520 | 32.143 | 252 | 147 | 10 | 1 | 236 | 1 | 244 | 1.36e-24 | 102 |
| MS.gene73752.t1 | MTR_7g082470 | 27.143 | 280 | 141 | 10 | 16 | 257 | 1 | 255 | 9.35e-22 | 94.4 |
| MS.gene73752.t1 | MTR_6g082980 | 29.018 | 224 | 136 | 9 | 1 | 206 | 5 | 223 | 2.36e-21 | 90.5 |
| MS.gene73752.t1 | MTR_6g082990 | 29.386 | 228 | 149 | 7 | 38 | 256 | 35 | 259 | 7.94e-20 | 86.3 |
| MS.gene73752.t1 | MTR_6g083010 | 28.826 | 281 | 164 | 15 | 3 | 256 | 15 | 286 | 1.27e-18 | 83.6 |
| MS.gene73752.t1 | MTR_1g115485 | 27.068 | 266 | 166 | 10 | 13 | 255 | 7 | 267 | 1.40e-18 | 85.1 |
| MS.gene73752.t1 | MTR_7g082510 | 28.452 | 239 | 133 | 10 | 14 | 238 | 21 | 235 | 2.56e-17 | 81.6 |
| MS.gene73752.t1 | MTR_7g082430 | 28.169 | 213 | 112 | 8 | 32 | 238 | 41 | 218 | 2.70e-17 | 81.3 |
| MS.gene73752.t1 | MTR_6g044830 | 31.343 | 201 | 122 | 8 | 36 | 223 | 4 | 201 | 8.17e-17 | 80.1 |
| MS.gene73752.t1 | MTR_6g083760 | 28.241 | 216 | 139 | 10 | 36 | 243 | 44 | 251 | 4.01e-15 | 75.1 |
| MS.gene73752.t1 | MTR_6g082870 | 28.926 | 242 | 136 | 11 | 33 | 247 | 51 | 283 | 4.18e-14 | 72.0 |
| MS.gene73752.t1 | MTR_6g083780 | 28.191 | 188 | 121 | 6 | 36 | 216 | 52 | 232 | 2.45e-13 | 69.7 |
| MS.gene73752.t1 | MTR_6g083020 | 25.359 | 209 | 145 | 7 | 38 | 240 | 47 | 250 | 3.88e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73752.t1 | AT1G66880 | 36.139 | 202 | 115 | 4 | 32 | 230 | 33 | 223 | 2.02e-31 | 122 |
| MS.gene73752.t1 | AT1G66880 | 36.139 | 202 | 115 | 4 | 32 | 230 | 33 | 223 | 3.86e-31 | 122 |
| MS.gene73752.t1 | AT1G66880 | 26.549 | 226 | 146 | 7 | 26 | 235 | 246 | 467 | 6.68e-20 | 89.4 |
| MS.gene73752.t1 | AT1G67000 | 36.404 | 228 | 117 | 8 | 27 | 246 | 26 | 233 | 6.81e-31 | 121 |
| MS.gene73752.t1 | AT1G67000 | 28.512 | 242 | 142 | 11 | 22 | 241 | 241 | 473 | 2.78e-21 | 93.2 |
| MS.gene73752.t1 | AT1G66940 | 34.182 | 275 | 126 | 10 | 11 | 246 | 9 | 267 | 8.60e-31 | 117 |
| MS.gene73752.t1 | AT1G66940 | 34.182 | 275 | 126 | 10 | 11 | 246 | 9 | 267 | 1.55e-30 | 117 |
| MS.gene73752.t1 | AT1G66940 | 34.340 | 265 | 120 | 10 | 11 | 238 | 9 | 256 | 1.82e-30 | 115 |
| MS.gene73752.t1 | AT1G66940 | 34.340 | 265 | 120 | 10 | 11 | 238 | 9 | 256 | 1.82e-30 | 115 |
| MS.gene73752.t1 | AT1G66930 | 35.644 | 202 | 116 | 5 | 32 | 230 | 33 | 223 | 3.20e-30 | 119 |
| MS.gene73752.t1 | AT1G66930 | 28.700 | 223 | 139 | 6 | 32 | 238 | 252 | 470 | 1.19e-18 | 85.5 |
| MS.gene73752.t1 | AT1G66880 | 35.859 | 198 | 113 | 4 | 36 | 230 | 416 | 602 | 1.01e-29 | 117 |
| MS.gene73752.t1 | AT1G66880 | 31.250 | 192 | 122 | 5 | 38 | 228 | 26 | 208 | 3.14e-21 | 93.2 |
| MS.gene73752.t1 | AT1G66880 | 26.549 | 226 | 146 | 7 | 26 | 235 | 625 | 846 | 8.98e-20 | 89.0 |
| MS.gene73752.t1 | AT1G66880 | 27.717 | 184 | 110 | 7 | 51 | 226 | 229 | 397 | 1.76e-11 | 64.3 |
| MS.gene73752.t1 | AT1G66920 | 35.652 | 230 | 130 | 8 | 32 | 256 | 33 | 249 | 1.38e-28 | 114 |
| MS.gene73752.t1 | AT1G66920 | 35.652 | 230 | 130 | 8 | 32 | 256 | 33 | 249 | 1.56e-28 | 114 |
| MS.gene73752.t1 | AT1G66920 | 37.129 | 202 | 110 | 7 | 32 | 228 | 33 | 222 | 8.99e-28 | 112 |
| MS.gene73752.t1 | AT5G38260 | 30.453 | 243 | 153 | 7 | 11 | 239 | 12 | 252 | 2.26e-26 | 107 |
| MS.gene73752.t1 | AT5G38210 | 31.602 | 231 | 139 | 7 | 3 | 229 | 14 | 229 | 1.73e-25 | 105 |
| MS.gene73752.t1 | AT5G38210 | 27.727 | 220 | 141 | 7 | 32 | 239 | 20 | 233 | 2.83e-23 | 99.0 |
| MS.gene73752.t1 | AT5G38210 | 27.354 | 223 | 144 | 7 | 29 | 239 | 35 | 251 | 3.27e-23 | 99.0 |
| MS.gene73752.t1 | AT1G66910 | 25.600 | 250 | 158 | 6 | 14 | 239 | 17 | 262 | 1.01e-18 | 85.5 |
| MS.gene73752.t1 | AT1G66910 | 26.400 | 250 | 156 | 8 | 14 | 239 | 17 | 262 | 1.14e-18 | 85.5 |
| MS.gene73752.t1 | AT5G38250 | 30.964 | 197 | 116 | 6 | 36 | 225 | 41 | 224 | 1.99e-18 | 84.7 |
| MS.gene73752.t1 | AT5G38240 | 34.536 | 194 | 103 | 8 | 23 | 205 | 26 | 206 | 1.16e-16 | 79.7 |
| MS.gene73752.t1 | AT5G38240 | 34.536 | 194 | 103 | 8 | 23 | 205 | 26 | 206 | 1.19e-16 | 79.7 |
| MS.gene73752.t1 | AT1G66930 | 28.037 | 214 | 134 | 6 | 32 | 229 | 71 | 280 | 1.72e-15 | 76.3 |
| MS.gene73752.t1 | AT1G66930 | 28.037 | 214 | 134 | 6 | 32 | 229 | 71 | 280 | 1.95e-15 | 75.9 |
| MS.gene73752.t1 | AT1G67025 | 27.363 | 201 | 134 | 8 | 44 | 239 | 17 | 210 | 1.60e-14 | 70.9 |
| MS.gene73752.t1 | AT1G18390 | 24.766 | 214 | 143 | 7 | 46 | 251 | 50 | 253 | 4.92e-12 | 65.9 |
Find 47 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGGTTTGGTTCTTATAT+TGG | 0.250167 | 7.3:+25316622 | MS.gene73752:CDS |
| AACACTGACCTCTTTGCTTA+TGG | 0.260209 | 7.3:+25316484 | MS.gene73752:CDS |
| TGTGGAACTATAAAACAAAT+TGG | 0.275223 | 7.3:+25316256 | MS.gene73752:CDS |
| AATAATCTTACACTCTTCTA+TGG | 0.285737 | 7.3:+25316517 | MS.gene73752:CDS |
| TCCTTGCAAATTGTCCTCTT+TGG | 0.289570 | 7.3:-25316428 | None:intergenic |
| GAATATGTTTATACTTGGTT+TGG | 0.334018 | 7.3:+25316610 | MS.gene73752:CDS |
| AAAGGGTGGCCACACTCTTT+TGG | 0.336772 | 7.3:-25316304 | None:intergenic |
| TCATTTGAGCTCAAATATAA+AGG | 0.368635 | 7.3:-25316211 | None:intergenic |
| CTGGAACAACCATACTTTGT+TGG | 0.394164 | 7.3:-25316663 | None:intergenic |
| TGTGAGAAGTGTAAAGAATC+AGG | 0.395896 | 7.3:+25316781 | MS.gene73752:CDS |
| TACTTTCCATGTCCTTCAAA+TGG | 0.402968 | 7.3:+25316577 | MS.gene73752:CDS |
| GTGGTTATAACTGGACTTCA+AGG | 0.407568 | 7.3:+25316812 | MS.gene73752:CDS |
| GTGTTTAGTGTTGTGTTGAC+AGG | 0.432638 | 7.3:-25316466 | None:intergenic |
| TCAAAAGGATATCCATTTGA+AGG | 0.455340 | 7.3:-25316589 | None:intergenic |
| TGCAATTGAGATTCAACAAA+GGG | 0.455829 | 7.3:-25316321 | None:intergenic |
| ATACTTTGTTGGCATGAAAA+CGG | 0.485354 | 7.3:-25316652 | None:intergenic |
| CAAGTATAAACATATTCAAA+AGG | 0.511931 | 7.3:-25316604 | None:intergenic |
| GGATATCCATTTGAAGGACA+TGG | 0.511967 | 7.3:-25316583 | None:intergenic |
| AGACTGATCTCTGCAGTAGC+AGG | 0.524963 | 7.3:-25316842 | None:intergenic |
| CAAAGTATGTCCACCAGGGT+TGG | 0.531376 | 7.3:-25316398 | None:intergenic |
| TGTGAGAATCTGTTTAATTG+TGG | 0.537109 | 7.3:+25316238 | MS.gene73752:CDS |
| TTATATTTGAGCTCAAATGA+AGG | 0.537398 | 7.3:+25316214 | MS.gene73752:CDS |
| GGTCGATCCCCTCCCCAGAA+AGG | 0.542122 | 7.3:-25316283 | None:intergenic |
| TTTGTGGTGAGATGGATAGC+TGG | 0.564260 | 7.3:+25316748 | MS.gene73752:CDS |
| GGAAAGTATCCACGTGGCGA+AGG | 0.565003 | 7.3:-25316562 | None:intergenic |
| TGCAATCAGAGATGGATTTG+TGG | 0.566962 | 7.3:+25316732 | MS.gene73752:CDS |
| ATACAAAGTGCAATCAGAGA+TGG | 0.568148 | 7.3:+25316724 | MS.gene73752:CDS |
| TGTTCTAATGCACAGTCTCA+AGG | 0.575655 | 7.3:+25316865 | MS.gene73752:CDS |
| GAGATGGATTTGTGGTGAGA+TGG | 0.580019 | 7.3:+25316740 | MS.gene73752:CDS |
| ATTCTCAAAGTATGTCCACC+AGG | 0.580295 | 7.3:-25316403 | None:intergenic |
| GGCGAAGGTAAAGTAAATGA+AGG | 0.586984 | 7.3:-25316547 | None:intergenic |
| TGAAGGATAATAAACAAGGA+GGG | 0.609659 | 7.3:-25316148 | None:intergenic |
| GTGCAATTGAGATTCAACAA+AGG | 0.612374 | 7.3:-25316322 | None:intergenic |
| GTATCTGAATCAGTTTCAAG+AGG | 0.620450 | 7.3:-25316189 | None:intergenic |
| AGTCAGAACCATAAGCAAAG+AGG | 0.620955 | 7.3:-25316492 | None:intergenic |
| TACTTTGAGAATCACCAAAG+AGG | 0.625009 | 7.3:+25316414 | MS.gene73752:CDS |
| ACCAAAGAGGACAATTTGCA+AGG | 0.627376 | 7.3:+25316427 | MS.gene73752:CDS |
| ATGAAGGATAATAAACAAGG+AGG | 0.646970 | 7.3:-25316149 | None:intergenic |
| TTATGACTTGAAGAACATGA+AGG | 0.662073 | 7.3:-25316165 | None:intergenic |
| GGGGATCGACCAAAAGAGTG+TGG | 0.667307 | 7.3:+25316295 | MS.gene73752:CDS |
| AATTGAGATTCAACAAAGGG+TGG | 0.667350 | 7.3:-25316318 | None:intergenic |
| GAGAAGTGTAAAGAATCAGG+TGG | 0.667414 | 7.3:+25316784 | MS.gene73752:CDS |
| AACATGAAGGATAATAAACA+AGG | 0.673826 | 7.3:-25316152 | None:intergenic |
| TTTACTTTACCTTCGCCACG+TGG | 0.674813 | 7.3:+25316553 | MS.gene73752:CDS |
| GAAGGTAAAGTAAATGAAGG+AGG | 0.677333 | 7.3:-25316544 | None:intergenic |
| TTCTCAAAGTATGTCCACCA+GGG | 0.712267 | 7.3:-25316402 | None:intergenic |
| GGACATGGAAAGTATCCACG+TGG | 0.769460 | 7.3:-25316568 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAGTATAAACATATTCAAA+AGG | - | chr7.3:25316607-25316626 | None:intergenic | 20.0% |
| !!! | CTTTTGAATATGTTTATACT+TGG | + | chr7.3:25316605-25316624 | MS.gene73752:CDS | 20.0% |
| ! | AACATGAAGGATAATAAACA+AGG | - | chr7.3:25316155-25316174 | None:intergenic | 25.0% |
| ! | AATAATCTTACACTCTTCTA+TGG | + | chr7.3:25316517-25316536 | MS.gene73752:CDS | 25.0% |
| ! | GAATATGTTTATACTTGGTT+TGG | + | chr7.3:25316610-25316629 | MS.gene73752:CDS | 25.0% |
| ! | TCAAAAAATGAATCAGAAAC+TGG | - | chr7.3:25316685-25316704 | None:intergenic | 25.0% |
| ! | TCATTTGAGCTCAAATATAA+AGG | - | chr7.3:25316214-25316233 | None:intergenic | 25.0% |
| ! | TGTGGAACTATAAAACAAAT+TGG | + | chr7.3:25316256-25316275 | MS.gene73752:CDS | 25.0% |
| ! | TTATATTTGAGCTCAAATGA+AGG | + | chr7.3:25316214-25316233 | MS.gene73752:CDS | 25.0% |
| ATACTTTGTTGGCATGAAAA+CGG | - | chr7.3:25316655-25316674 | None:intergenic | 30.0% | |
| ATGAAGGATAATAAACAAGG+AGG | - | chr7.3:25316152-25316171 | None:intergenic | 30.0% | |
| TAGTATGAACAACAATTGCA+AGG | + | chr7.3:25316948-25316967 | MS.gene73752:intron | 30.0% | |
| TCAAAAGGATATCCATTTGA+AGG | - | chr7.3:25316592-25316611 | None:intergenic | 30.0% | |
| TGAAGGATAATAAACAAGGA+GGG | - | chr7.3:25316151-25316170 | None:intergenic | 30.0% | |
| TGCAATTGAGATTCAACAAA+GGG | - | chr7.3:25316324-25316343 | None:intergenic | 30.0% | |
| TGTGAGAATCTGTTTAATTG+TGG | + | chr7.3:25316238-25316257 | MS.gene73752:CDS | 30.0% | |
| TTATGACTTGAAGAACATGA+AGG | - | chr7.3:25316168-25316187 | None:intergenic | 30.0% | |
| !! | ACTTGGTTTGGTTCTTATAT+TGG | + | chr7.3:25316622-25316641 | MS.gene73752:CDS | 30.0% |
| !!! | AACAAATTGGTTTTCCTTTC+TGG | + | chr7.3:25316269-25316288 | MS.gene73752:CDS | 30.0% |
| !!! | ACAAATTGGTTTTCCTTTCT+GGG | + | chr7.3:25316270-25316289 | MS.gene73752:CDS | 30.0% |
| AATTGAGATTCAACAAAGGG+TGG | - | chr7.3:25316321-25316340 | None:intergenic | 35.0% | |
| ATACAAAGTGCAATCAGAGA+TGG | + | chr7.3:25316724-25316743 | MS.gene73752:CDS | 35.0% | |
| GAAGGTAAAGTAAATGAAGG+AGG | - | chr7.3:25316547-25316566 | None:intergenic | 35.0% | |
| GAGAAAAACACAACACTTAG+CGG | + | chr7.3:25316972-25316991 | MS.gene73752:CDS | 35.0% | |
| GTATCTGAATCAGTTTCAAG+AGG | - | chr7.3:25316192-25316211 | None:intergenic | 35.0% | |
| GTGCAATTGAGATTCAACAA+AGG | - | chr7.3:25316325-25316344 | None:intergenic | 35.0% | |
| TACTTTCCATGTCCTTCAAA+TGG | + | chr7.3:25316577-25316596 | MS.gene73752:CDS | 35.0% | |
| ! | GTGGATTTTGTGGTTATAAC+TGG | + | chr7.3:25316803-25316822 | MS.gene73752:CDS | 35.0% |
| ! | GTTTTCATGCCAACAAAGTA+TGG | + | chr7.3:25316654-25316673 | MS.gene73752:CDS | 35.0% |
| ! | TACTTTGAGAATCACCAAAG+AGG | + | chr7.3:25316414-25316433 | MS.gene73752:CDS | 35.0% |
| ! | TGTGAGAAGTGTAAAGAATC+AGG | + | chr7.3:25316781-25316800 | MS.gene73752:CDS | 35.0% |
| !! | AAAGAATCAGGTGGATTTTG+TGG | + | chr7.3:25316793-25316812 | MS.gene73752:CDS | 35.0% |
| !!! | CAAATTGGTTTTCCTTTCTG+GGG | + | chr7.3:25316271-25316290 | MS.gene73752:CDS | 35.0% |
| AACACTGACCTCTTTGCTTA+TGG | + | chr7.3:25316484-25316503 | MS.gene73752:CDS | 40.0% | |
| ACCAAAGAGGACAATTTGCA+AGG | + | chr7.3:25316427-25316446 | MS.gene73752:CDS | 40.0% | |
| AGTCAGAACCATAAGCAAAG+AGG | - | chr7.3:25316495-25316514 | None:intergenic | 40.0% | |
| ATTCTCAAAGTATGTCCACC+AGG | - | chr7.3:25316406-25316425 | None:intergenic | 40.0% | |
| CTGGAACAACCATACTTTGT+TGG | - | chr7.3:25316666-25316685 | None:intergenic | 40.0% | |
| GGATATCCATTTGAAGGACA+TGG | - | chr7.3:25316586-25316605 | None:intergenic | 40.0% | |
| GGCGAAGGTAAAGTAAATGA+AGG | - | chr7.3:25316550-25316569 | None:intergenic | 40.0% | |
| GTGGTTATAACTGGACTTCA+AGG | + | chr7.3:25316812-25316831 | MS.gene73752:CDS | 40.0% | |
| TCCTTGCAAATTGTCCTCTT+TGG | - | chr7.3:25316431-25316450 | None:intergenic | 40.0% | |
| TGTTCTAATGCACAGTCTCA+AGG | + | chr7.3:25316865-25316884 | MS.gene73752:CDS | 40.0% | |
| TTCTCAAAGTATGTCCACCA+GGG | - | chr7.3:25316405-25316424 | None:intergenic | 40.0% | |
| ! | GAGAAGTGTAAAGAATCAGG+TGG | + | chr7.3:25316784-25316803 | MS.gene73752:CDS | 40.0% |
| ! | GTGTTTAGTGTTGTGTTGAC+AGG | - | chr7.3:25316469-25316488 | None:intergenic | 40.0% |
| ! | TGCAATCAGAGATGGATTTG+TGG | + | chr7.3:25316732-25316751 | MS.gene73752:CDS | 40.0% |
| !! | GTTGTGTTGACAGGTTTTGT+TGG | - | chr7.3:25316460-25316479 | None:intergenic | 40.0% |
| TTTACTTTACCTTCGCCACG+TGG | + | chr7.3:25316553-25316572 | MS.gene73752:CDS | 45.0% | |
| TTTGTGGTGAGATGGATAGC+TGG | + | chr7.3:25316748-25316767 | MS.gene73752:CDS | 45.0% | |
| ! | GAGATGGATTTGTGGTGAGA+TGG | + | chr7.3:25316740-25316759 | MS.gene73752:CDS | 45.0% |
| !! | TTGGTTTTCCTTTCTGGGGA+GGG | + | chr7.3:25316275-25316294 | MS.gene73752:CDS | 45.0% |
| !!! | ATTGGTTTTCCTTTCTGGGG+AGG | + | chr7.3:25316274-25316293 | MS.gene73752:CDS | 45.0% |
| !!! | CATGTTTTAGAAGCCAACCC+TGG | + | chr7.3:25316385-25316404 | MS.gene73752:CDS | 45.0% |
| AGACTGATCTCTGCAGTAGC+AGG | - | chr7.3:25316845-25316864 | None:intergenic | 50.0% | |
| CAAAGTATGTCCACCAGGGT+TGG | - | chr7.3:25316401-25316420 | None:intergenic | 50.0% | |
| ! | AAAGGGTGGCCACACTCTTT+TGG | - | chr7.3:25316307-25316326 | None:intergenic | 50.0% |
| !! | GGACATGGAAAGTATCCACG+TGG | - | chr7.3:25316571-25316590 | None:intergenic | 50.0% |
| !! | TGGTTTTCCTTTCTGGGGAG+GGG | + | chr7.3:25316276-25316295 | MS.gene73752:CDS | 50.0% |
| !!! | GTTTTAGAAGCCAACCCTGG+TGG | + | chr7.3:25316388-25316407 | MS.gene73752:CDS | 50.0% |
| GGGGATCGACCAAAAGAGTG+TGG | + | chr7.3:25316295-25316314 | MS.gene73752:CDS | 55.0% | |
| !! | GGAAAGTATCCACGTGGCGA+AGG | - | chr7.3:25316565-25316584 | None:intergenic | 55.0% |
| GGTCGATCCCCTCCCCAGAA+AGG | - | chr7.3:25316286-25316305 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 25316145 | 25317001 | 25316145 | ID=MS.gene73752 |
| chr7.3 | mRNA | 25316145 | 25317001 | 25316145 | ID=MS.gene73752.t1;Parent=MS.gene73752 |
| chr7.3 | exon | 25316145 | 25316886 | 25316145 | ID=MS.gene73752.t1.exon1;Parent=MS.gene73752.t1 |
| chr7.3 | CDS | 25316145 | 25316886 | 25316145 | ID=cds.MS.gene73752.t1;Parent=MS.gene73752.t1 |
| chr7.3 | exon | 25316970 | 25317001 | 25316970 | ID=MS.gene73752.t1.exon2;Parent=MS.gene73752.t1 |
| chr7.3 | CDS | 25316970 | 25317001 | 25316970 | ID=cds.MS.gene73752.t1;Parent=MS.gene73752.t1 |
| Gene Sequence |
| Protein sequence |
