AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74113


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74113.t1 MTR_7g105270 74.747 99 25 0 28 126 51 149 1.52e-41 157
MS.gene74113.t1 MTR_4g102460 69.811 106 32 0 21 126 60 165 1.60e-41 159
MS.gene74113.t1 MTR_7g056297 79.012 81 17 0 30 110 53 133 8.64e-35 137
MS.gene74113.t1 MTR_1g105095 67.568 74 24 0 16 89 105 178 1.04e-27 110
MS.gene74113.t1 MTR_8g054490 92.308 65 5 0 1 65 41 105 8.87e-24 100
MS.gene74113.t1 MTR_7g025190 77.049 61 13 1 581 640 25 85 1.97e-23 95.5
MS.gene74113.t1 MTR_6g045307 29.646 226 136 4 226 448 143 348 1.93e-21 100
MS.gene74113.t1 MTR_7g034745 94.444 54 3 0 1 54 41 94 1.27e-20 87.4
MS.gene74113.t1 MTR_1361s0010 49.533 107 46 2 53 153 1 105 1.73e-20 91.7
MS.gene74113.t1 MTR_1g052140 34.731 167 74 2 221 387 98 229 4.24e-20 95.1
MS.gene74113.t1 MTR_4g124660 74.603 63 15 1 583 644 126 188 2.21e-18 90.1
MS.gene74113.t1 MTR_4g124660 74.603 63 15 1 583 644 126 188 2.72e-18 89.7
MS.gene74113.t1 MTR_2g044070 69.355 62 18 1 583 643 124 185 1.77e-15 80.9
MS.gene74113.t1 MTR_2g076860 23.438 192 104 1 2 193 72 220 6.69e-13 69.3
MS.gene74113.t1 MTR_7g025200 67.925 53 14 2 581 630 96 148 1.19e-12 68.9
MS.gene74113.t1 MTR_0003s0410 41.935 93 53 1 221 313 672 763 3.13e-12 70.5
MS.gene74113.t1 MTR_0045s0120 71.429 42 12 0 25 66 48 89 4.19e-12 63.5
MS.gene74113.t1 MTR_7g060240 68.421 38 12 0 25 62 65 102 4.91e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74113.t1 AT3G43190 71.698 53 14 1 586 637 131 183 1.73e-13 74.3
MS.gene74113.t1 AT3G43190 71.698 53 14 1 586 637 131 183 1.73e-13 74.3

Find 113 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTACGAGAAGCCATTATT+TGG 0.166385 7.4:+75942937 MS.gene74113:CDS
AACTTGGCATTTGGTTGTTT+TGG 0.251939 7.4:-75943843 None:intergenic
TGAAGAAACATGCTTCAATT+TGG 0.257143 7.4:+75940138 MS.gene74113:CDS
AGTTGTGACGCTTCCAATTC+AGG 0.261063 7.4:+75942417 MS.gene74113:CDS
AATCTTTAAAGTTGGAGATT+TGG 0.275597 7.4:+75943791 MS.gene74113:CDS
TCCATAAGCACTACATATTC+TGG 0.284380 7.4:-75944348 None:intergenic
TACCCAAGAAGCATTCTTAT+AGG 0.291800 7.4:+75940501 MS.gene74113:CDS
CTTGGTGACAACTTGGCATT+TGG 0.298252 7.4:-75943852 None:intergenic
GACGCTTCCAATTCAGGAAT+TGG 0.321227 7.4:+75942423 MS.gene74113:CDS
GTTCCTATAAGAATGCTTCT+TGG 0.324794 7.4:-75940504 None:intergenic
CAAAGACCCGTTCAACAGTT+TGG 0.339906 7.4:-75940064 None:intergenic
TGTAGCTTTCCTTCAAAATC+AGG 0.348866 7.4:-75940017 None:intergenic
GCCCATGATGGAGGATTAAC+AGG 0.364439 7.4:+75942963 MS.gene74113:CDS
CTTTAAAGATTTGTTGTCTT+CGG 0.367483 7.4:-75943779 None:intergenic
TCTCTGAATGATTGTCTTTG+TGG 0.372035 7.4:-75939972 None:intergenic
GCCAGAATATGTAGTGCTTA+TGG 0.380204 7.4:+75944347 MS.gene74113:CDS
ATCATGGGCTTCCCAAATAA+TGG 0.381536 7.4:-75942949 None:intergenic
AACCGCGCCAATTCCTGAAT+TGG 0.382822 7.4:-75942430 None:intergenic
GGCATAAAATTCTTTATCAT+AGG 0.389535 7.4:-75942523 None:intergenic
CCGCTTACAGATTGCATAAA+GGG 0.395776 7.4:+75942282 MS.gene74113:intron
CCCGCTTACAGATTGCATAA+AGG 0.395951 7.4:+75942281 MS.gene74113:intron
CGTCTAATGACCAGTATTGT+TGG 0.403261 7.4:-75940442 None:intergenic
TTCCTATAAGAATGCTTCTT+GGG 0.406315 7.4:-75940503 None:intergenic
ATCATCTTTGTATAACTCCT+TGG 0.414759 7.4:-75942805 None:intergenic
TGTGTGCTTGCTCGGCCCAT+TGG 0.421703 7.4:-75942314 None:intergenic
TCCGTTCTTACTAAAACATA+AGG 0.427155 7.4:+75942692 MS.gene74113:CDS
TCTACGAGAAGCCATTATTT+GGG 0.435089 7.4:+75942938 MS.gene74113:CDS
CAGTATTGTTGGAGTTGAAC+TGG 0.437702 7.4:-75940431 None:intergenic
ACTATGCAAATGAAAGTCAT+TGG 0.441211 7.4:+75942771 MS.gene74113:CDS
TTAGAGAGTGGATTCTCTCT+TGG 0.441340 7.4:+75944317 MS.gene74113:CDS
AGCCAATCAATGAACTCATC+TGG 0.442778 7.4:-75940041 None:intergenic
AGACAACAAATCTTTAAAGT+TGG 0.449956 7.4:+75943783 MS.gene74113:CDS
TTGGCTCCAAACTGTTGAAC+GGG 0.451354 7.4:+75940058 MS.gene74113:CDS
AATGACTTTCATTTGCATAG+TGG 0.452688 7.4:-75942769 None:intergenic
TTCGAACACCTGGTCAAAGT+TGG 0.453463 7.4:-75942391 None:intergenic
TTAAAGTTGGAGATTTGGTA+TGG 0.454269 7.4:+75943796 MS.gene74113:CDS
TCGCAGAAAGGTGGCGATTG+AGG 0.459459 7.4:-75944457 None:intergenic
CAGTTCAACTCCAACAATAC+TGG 0.462929 7.4:+75940432 MS.gene74113:CDS
ATCAGCTCTTGGTGACAACT+TGG 0.464395 7.4:-75943859 None:intergenic
TTGAAAGGACCATCAGCTCT+TGG 0.469552 7.4:-75943870 None:intergenic
TCATTTGCATAGTGGCAAGT+AGG 0.470951 7.4:-75942761 None:intergenic
ATCCAGATGAGTTCATTGAT+TGG 0.473409 7.4:+75940039 MS.gene74113:CDS
GTTCCGTATGCTACCTCAAA+AGG 0.478007 7.4:-75943597 None:intergenic
ACAATAGCTCGTTACCTTGG+TGG 0.486510 7.4:+75940386 MS.gene74113:CDS
CACTGATTCACAATCCTCTC+AGG 0.487608 7.4:+75942854 MS.gene74113:CDS
CATGGAAGAGTTTCGCAGAA+AGG 0.488480 7.4:-75944469 None:intergenic
CATTTGCATAGTGGCAAGTA+GGG 0.490498 7.4:-75942760 None:intergenic
TACTGATGTTTATCTGATGA+TGG 0.491367 7.4:-75943648 None:intergenic
CCTTGTAGTTGCGAATTCCT+CGG 0.494248 7.4:-75944523 None:intergenic
TTGTCCGAGCCTTGCAACAT+TGG 0.495282 7.4:+75942547 MS.gene74113:CDS
AGAAACATGCTTCAATTTGG+TGG 0.496507 7.4:+75940141 MS.gene74113:CDS
TCGAACACCTGGTCAAAGTT+GGG 0.496804 7.4:-75942390 None:intergenic
CTCAACAAATCAATTATGAA+TGG 0.500059 7.4:+75944425 MS.gene74113:CDS
TTGTTGCAGATGCTCTTAGC+AGG 0.500657 7.4:+75942730 MS.gene74113:CDS
TAGTGCTTATGGAAACTTTG+TGG 0.501834 7.4:+75944358 MS.gene74113:CDS
GACCTGTTAATCCTCCATCA+TGG 0.507024 7.4:-75942965 None:intergenic
AATCAATGACAATGCTTACA+AGG 0.509061 7.4:+75943905 MS.gene74113:CDS
GACTCCAATGTTGCAAGGCT+CGG 0.513210 7.4:-75942551 None:intergenic
GAAACATGCTTCAATTTGGT+GGG 0.515877 7.4:+75940142 MS.gene74113:CDS
CCGAGGAATTCGCAACTACA+AGG 0.525641 7.4:+75944523 MS.gene74113:CDS
AGCCCTTCCCAACTTTGACC+AGG 0.535813 7.4:+75942383 MS.gene74113:CDS
CTCATTTGAGAGTTAGAGAG+TGG 0.538450 7.4:+75944305 MS.gene74113:intron
ACCTGTTAATCCTCCATCAT+GGG 0.543815 7.4:-75942964 None:intergenic
AAAACGAAGCGAGCCCGTGA+AGG 0.545203 7.4:+75940173 MS.gene74113:CDS
ATGGAAACTTTGTGGTTGAG+TGG 0.545338 7.4:+75944366 MS.gene74113:CDS
ATAATTGATTTGTTGAGAGT+AGG 0.548377 7.4:-75944419 None:intergenic
ATGTTGCAAGGCTCGGACAA+TGG 0.549135 7.4:-75942544 None:intergenic
CACAACTTACTTCGAACACC+TGG 0.555960 7.4:-75942401 None:intergenic
CAAACAATAGCTCGTTACCT+TGG 0.556712 7.4:+75940383 MS.gene74113:CDS
ATTATTTGGGAAGCCCATGA+TGG 0.557585 7.4:+75942951 MS.gene74113:CDS
CATCCACTTCTCGAATTCCG+AGG 0.558445 7.4:+75944506 MS.gene74113:CDS
TCAACCGCAGACATGCCGCT+TGG 0.562538 7.4:+75942649 MS.gene74113:CDS
GAAGTGCGACATTCATGAAA+GGG 0.562630 7.4:+75940355 MS.gene74113:CDS
AAAGGGAGATCAATTCCAAT+GGG 0.564048 7.4:+75942299 MS.gene74113:CDS
ATTCAGAGACAGCGACATCA+AGG 0.569278 7.4:+75939986 MS.gene74113:CDS
GATGCAAACTCTCCTTGTCA+TGG 0.570012 7.4:-75944487 None:intergenic
TAAATGTTTCTCCACTCGTA+TGG 0.571332 7.4:-75940480 None:intergenic
CACTCCAAGCGGCATGTCTG+CGG 0.573012 7.4:-75942653 None:intergenic
ACACCTGGTCAAAGTTGGGA+AGG 0.579818 7.4:-75942386 None:intergenic
ATTGGCTCCAAACTGTTGAA+CGG 0.582920 7.4:+75940057 MS.gene74113:CDS
AGAGCACTGAGGAATACATA+AGG 0.585072 7.4:-75942916 None:intergenic
AAGCACTACATATTCTGGCT+CGG 0.586953 7.4:-75944343 None:intergenic
TGAAGTGCGACATTCATGAA+AGG 0.588057 7.4:+75940354 MS.gene74113:CDS
TTTAGTGAAAAGCTCAACAA+TGG 0.590823 7.4:+75942483 MS.gene74113:CDS
TGCGAAACTCTTCCATGACA+AGG 0.593649 7.4:+75944475 MS.gene74113:CDS
TAAAGGGAGATCAATTCCAA+TGG 0.596123 7.4:+75942298 MS.gene74113:CDS
AAGTTGTCACCAAGAGCTGA+TGG 0.598597 7.4:+75943861 MS.gene74113:CDS
CTGAGAGGATTGTGAATCAG+TGG 0.599316 7.4:-75942853 None:intergenic
GAATTCGCAACTACAAGGAA+AGG 0.602885 7.4:+75944528 MS.gene74113:CDS
ATTTGGGAAGCCCATGATGG+AGG 0.604783 7.4:+75942954 MS.gene74113:CDS
AAGTTGGGAAGGGCTAGCAC+TGG 0.617784 7.4:-75942375 None:intergenic
TTCTTACTAAAACATAAGGC+GGG 0.617806 7.4:+75942696 MS.gene74113:CDS
TGCATGAACAAGTTCGCCAA+CGG 0.617808 7.4:+75943712 MS.gene74113:CDS
GGCGCGGTTCTATGTCAAGA+AGG 0.618948 7.4:+75942444 MS.gene74113:CDS
TTATCTTGATAATAGTGAGA+AGG 0.620206 7.4:-75940254 None:intergenic
CACCTGGTCAAAGTTGGGAA+GGG 0.621586 7.4:-75942385 None:intergenic
CATTGGATTTGAGACAGCCA+AGG 0.622233 7.4:+75942788 MS.gene74113:CDS
ATTCCTCGGAATTCGAGAAG+TGG 0.624171 7.4:-75944509 None:intergenic
GTTCTTACTAAAACATAAGG+CGG 0.624357 7.4:+75942695 MS.gene74113:CDS
CAGGACTACTACAGACATGA+GGG 0.625095 7.4:+75942873 MS.gene74113:CDS
GATGATGGAGTCAAGTCTAA+CGG 0.626466 7.4:-75943633 None:intergenic
GGAAGAGTTTCGCAGAAAGG+TGG 0.632517 7.4:-75944466 None:intergenic
TCAGGACTACTACAGACATG+AGG 0.632763 7.4:+75942872 MS.gene74113:CDS
GTAATGACTCCAATGTTGCA+AGG 0.650624 7.4:-75942556 None:intergenic
GTCAAGTCTAACGGACTGTG+TGG 0.657876 7.4:-75943624 None:intergenic
GTGCGACATTCATGAAAGGG+AGG 0.658783 7.4:+75940358 MS.gene74113:CDS
TTCCAATTCAGGAATTGGCG+CGG 0.668895 7.4:+75942428 MS.gene74113:CDS
ATAAGAAGAATTCTCAGCGG+AGG 0.685634 7.4:-75940531 None:intergenic
CGTCAGTGTTTAATCCACCA+AGG 0.695957 7.4:-75940400 None:intergenic
ATGTCTGTAGTAGTCCTGAG+AGG 0.696842 7.4:-75942868 None:intergenic
TATTCGTTTAGCCATACGAG+TGG 0.700782 7.4:+75940469 MS.gene74113:CDS
GGGATAAGAAGAATTCTCAG+CGG 0.781762 7.4:-75940534 None:intergenic
GCTTCTCGTAGAGAGCACTG+AGG 0.826263 7.4:-75942927 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTGTACTATTTTGAA+AGG - chr7.4:75943888-75943907 None:intergenic 15.0%
!!! TTAAATTCTTAAGTCATTTT+TGG + chr7.4:75943366-75943385 MS.gene74113:intron 15.0%
!! TAGTGAAAGAAAATTTCTAT+TGG + chr7.4:75943015-75943034 MS.gene74113:intron 20.0%
! AAACTAGTAAATGTCAAACA+TGG - chr7.4:75944179-75944198 None:intergenic 25.0%
! ACTTATTGTTAATAGTAGAG+TGG - chr7.4:75944089-75944108 None:intergenic 25.0%
! CTACTCTACTATTAACAATA+AGG + chr7.4:75944142-75944161 MS.gene74113:intron 25.0%
! CTCAACAAATCAATTATGAA+TGG + chr7.4:75944425-75944444 MS.gene74113:CDS 25.0%
! CTTATTTATAGTAATCCTAG+AGG - chr7.4:75944232-75944251 None:intergenic 25.0%
! GGCATAAAATTCTTTATCAT+AGG - chr7.4:75942526-75942545 None:intergenic 25.0%
! TATAAAATGAAGCTAATCCA+TGG - chr7.4:75942227-75942246 None:intergenic 25.0%
! TATTGTTAATAGTAGAGTAG+TGG - chr7.4:75944142-75944161 None:intergenic 25.0%
! TCTAATAAATCATCAAGTCT+AGG - chr7.4:75941739-75941758 None:intergenic 25.0%
! TTAGTGATTAAAGACACTAA+TGG - chr7.4:75941301-75941320 None:intergenic 25.0%
!! AAGGAAAGGTATATATTTCT+TGG + chr7.4:75944542-75944561 MS.gene74113:intron 25.0%
!! ATCCAGATTTTCAAAAGTTT+TGG + chr7.4:75942826-75942845 MS.gene74113:CDS 25.0%
!! GCATATAAAAACCAGATTTT+TGG - chr7.4:75943112-75943131 None:intergenic 25.0%
!! TTATCTTGATAATAGTGAGA+AGG - chr7.4:75940257-75940276 None:intergenic 25.0%
!!! AATCTTTAAAGTTGGAGATT+TGG + chr7.4:75943791-75943810 MS.gene74113:CDS 25.0%
!!! AGACAACAAATCTTTAAAGT+TGG + chr7.4:75943783-75943802 MS.gene74113:CDS 25.0%
!!! ATAATTGATTTGTTGAGAGT+AGG - chr7.4:75944422-75944441 None:intergenic 25.0%
!!! CTCTAGGATTACTATAAATA+AGG + chr7.4:75944230-75944249 MS.gene74113:intron 25.0%
!!! CTTTAAAGATTTGTTGTCTT+CGG - chr7.4:75943782-75943801 None:intergenic 25.0%
!!! GATTAGCTTCATTTTATAGA+AGG + chr7.4:75942229-75942248 MS.gene74113:intron 25.0%
!!! TTCCAAAACTTTTGAAAATC+TGG - chr7.4:75942831-75942850 None:intergenic 25.0%
!!! TTGTTTTTATCAAGTTCACT+CGG - chr7.4:75941265-75941284 None:intergenic 25.0%
!!! TTTCAGTCAAAAGTTGTTTT+AGG - chr7.4:75942353-75942372 None:intergenic 25.0%
AAAAACCATCACTTCTGATA+GGG + chr7.4:75943340-75943359 MS.gene74113:intron 30.0%
AAAAAGCAAGATCAAGACTT+GGG + chr7.4:75940196-75940215 MS.gene74113:CDS 30.0%
AAATCATCAAGTCTAGGTAT+CGG - chr7.4:75941733-75941752 None:intergenic 30.0%
AATGACTTTCATTTGCATAG+TGG - chr7.4:75942772-75942791 None:intergenic 30.0%
ACTATGCAAATGAAAGTCAT+TGG + chr7.4:75942771-75942790 MS.gene74113:CDS 30.0%
AGCATTTGTTCAATTTCTAC+TGG - chr7.4:75941406-75941425 None:intergenic 30.0%
ATCATCTTTGTATAACTCCT+TGG - chr7.4:75942808-75942827 None:intergenic 30.0%
ATGAGCTCTTCATCATAAAT+TGG - chr7.4:75940785-75940804 None:intergenic 30.0%
ATTGGCATAACAATCATGAT+GGG - chr7.4:75941191-75941210 None:intergenic 30.0%
CAAATTGTGTGAATACATGA+AGG - chr7.4:75944262-75944281 None:intergenic 30.0%
CATGGTAGTTGAAATAGTAA+TGG - chr7.4:75944208-75944227 None:intergenic 30.0%
CATTACTATTTCAACTACCA+TGG + chr7.4:75944206-75944225 MS.gene74113:intron 30.0%
GATTTATTAGATCAGTTGCA+TGG + chr7.4:75941748-75941767 MS.gene74113:intron 30.0%
GTTCTTACTAAAACATAAGG+CGG + chr7.4:75942695-75942714 MS.gene74113:CDS 30.0%
TACTGATGTTTATCTGATGA+TGG - chr7.4:75943651-75943670 None:intergenic 30.0%
TATTGGCATAACAATCATGA+TGG - chr7.4:75941192-75941211 None:intergenic 30.0%
TATTGTTAATAGTAGAGTGG+TGG - chr7.4:75944086-75944105 None:intergenic 30.0%
TCCGTTCTTACTAAAACATA+AGG + chr7.4:75942692-75942711 MS.gene74113:CDS 30.0%
TGAAGAAACATGCTTCAATT+TGG + chr7.4:75940138-75940157 MS.gene74113:CDS 30.0%
TGTGATGTTATAATAGACAG+TGG + chr7.4:75940926-75940945 MS.gene74113:intron 30.0%
TTCCTATAAGAATGCTTCTT+GGG - chr7.4:75940506-75940525 None:intergenic 30.0%
TTCTTACTAAAACATAAGGC+GGG + chr7.4:75942696-75942715 MS.gene74113:CDS 30.0%
TTGAACTTGATATAAACTCG+AGG + chr7.4:75943997-75944016 MS.gene74113:intron 30.0%
TTTAGTGAAAAGCTCAACAA+TGG + chr7.4:75942483-75942502 MS.gene74113:CDS 30.0%
TTTGTTCAATTTCTACTGGA+AGG - chr7.4:75941402-75941421 None:intergenic 30.0%
! AAGATCGATCTTTGAAAAGA+TGG - chr7.4:75941779-75941798 None:intergenic 30.0%
! AATTTTGCTGAAATATCCGT+TGG - chr7.4:75943731-75943750 None:intergenic 30.0%
! ATTCTATAAGCTGGTCTATT+AGG - chr7.4:75941529-75941548 None:intergenic 30.0%
! CGGTAAAAATCTAAAACAGT+GGG + chr7.4:75943508-75943527 MS.gene74113:intron 30.0%
! GTAGATATTCCTGATTTTGA+AGG + chr7.4:75940008-75940027 MS.gene74113:CDS 30.0%
! TCGGTAAAAATCTAAAACAG+TGG + chr7.4:75943507-75943526 MS.gene74113:intron 30.0%
! TCTAACTCTTCTTCTTTTTC+AGG - chr7.4:75940761-75940780 None:intergenic 30.0%
! TGTGGATAGATTTTCAAAGA+TGG + chr7.4:75943229-75943248 MS.gene74113:intron 30.0%
! TGTTTCAAATGTCATGGTTT+TGG + chr7.4:75940641-75940660 MS.gene74113:intron 30.0%
! TTAAAGTTGGAGATTTGGTA+TGG + chr7.4:75943796-75943815 MS.gene74113:CDS 30.0%
! TTTTACTCCATCTTTGACAA+AGG - chr7.4:75941221-75941240 None:intergenic 30.0%
! TTTTCACTAAAGAAGGCTAT+AGG - chr7.4:75942474-75942493 None:intergenic 30.0%
!! AGAAGTATCAAGATCAAGTT+TGG + chr7.4:75941098-75941117 MS.gene74113:intron 30.0%
!! TCATGAATTGACTTTGGAAT+AGG - chr7.4:75942192-75942211 None:intergenic 30.0%
!! TTGGGTTTATTTTCTGTAGT+GGG - chr7.4:75940611-75940630 None:intergenic 30.0%
!! TTTGGGTTTATTTTCTGTAG+TGG - chr7.4:75940612-75940631 None:intergenic 30.0%
!!! AAAACCAGATTTTTGGCTTT+TGG - chr7.4:75943105-75943124 None:intergenic 30.0%
!!! CATCATTAGTCTTTTGACAT+GGG - chr7.4:75943265-75943284 None:intergenic 30.0%
!!! GCCTTATGTTTTAGTAAGAA+CGG - chr7.4:75942696-75942715 None:intergenic 30.0%
!!! TTATTTTCTGTAGTGGGTTT+AGG - chr7.4:75940605-75940624 None:intergenic 30.0%
AAACTACAATGGCTCAACAA+AGG + chr7.4:75941025-75941044 MS.gene74113:intron 35.0%
AAAGGGAGATCAATTCCAAT+GGG + chr7.4:75942299-75942318 MS.gene74113:CDS 35.0%
AAGGAAATTGTTCGTCTTCA+TGG + chr7.4:75943311-75943330 MS.gene74113:intron 35.0%
ACCAAGTGTTTCAAATGTCA+TGG + chr7.4:75940635-75940654 MS.gene74113:intron 35.0%
ACTACAAACTTGCCAATGAA+TGG - chr7.4:75941955-75941974 None:intergenic 35.0%
AGAAACATGCTTCAATTTGG+TGG + chr7.4:75940141-75940160 MS.gene74113:CDS 35.0%
AGAACCATCACTATCATCAA+AGG + chr7.4:75940692-75940711 MS.gene74113:intron 35.0%
ATAGGATAAAGCTCATGGTT+TGG - chr7.4:75941354-75941373 None:intergenic 35.0%
ATCCAGATGAGTTCATTGAT+TGG + chr7.4:75940039-75940058 MS.gene74113:CDS 35.0%
ATCTTGATACTTCTGACCAA+TGG - chr7.4:75941092-75941111 None:intergenic 35.0%
ATTCAACCTAATCAAGCTAC+TGG + chr7.4:75943567-75943586 MS.gene74113:intron 35.0%
ATTCATTGGCAAGTTTGTAG+TGG + chr7.4:75941954-75941973 MS.gene74113:intron 35.0%
CAAAAACCATCACTTCTGAT+AGG + chr7.4:75943339-75943358 MS.gene74113:intron 35.0%
CCAGAGATGGTTTATATGAA+TGG + chr7.4:75941860-75941879 MS.gene74113:intron 35.0%
CCATTCATATAAACCATCTC+TGG - chr7.4:75941863-75941882 None:intergenic 35.0%
CTAGTAAATGTCAAACATGG+TGG - chr7.4:75944176-75944195 None:intergenic 35.0%
CTCATCCTTACAAACTACAA+TGG + chr7.4:75941014-75941033 MS.gene74113:intron 35.0%
GAAAAAGCAAGATCAAGACT+TGG + chr7.4:75940195-75940214 MS.gene74113:CDS 35.0%
GAAACATGCTTCAATTTGGT+GGG + chr7.4:75940142-75940161 MS.gene74113:CDS 35.0%
GAACAATAGGATAAAGCTCA+TGG - chr7.4:75941359-75941378 None:intergenic 35.0%
GACCAATGGAAAAATTCACA+AGG - chr7.4:75941078-75941097 None:intergenic 35.0%
GATTAAAGACACTAATGGCT+TGG - chr7.4:75941296-75941315 None:intergenic 35.0%
GTATAAGTCAGCAACTTGAA+CGG - chr7.4:75943288-75943307 None:intergenic 35.0%
GTGTGAATACATGAAGGAAA+TGG - chr7.4:75944256-75944275 None:intergenic 35.0%
GTTCCTATAAGAATGCTTCT+TGG - chr7.4:75940507-75940526 None:intergenic 35.0%
GTTGAAGAATTGCTGAAGAA+AGG + chr7.4:75941583-75941602 MS.gene74113:intron 35.0%
TAAAGGGAGATCAATTCCAA+TGG + chr7.4:75942298-75942317 MS.gene74113:CDS 35.0%
TAAATGTTTCTCCACTCGTA+TGG - chr7.4:75940483-75940502 None:intergenic 35.0%
TAGTGCTTATGGAAACTTTG+TGG + chr7.4:75944358-75944377 MS.gene74113:CDS 35.0%
TATCGGAAATCGATACTTGA+TGG - chr7.4:75941716-75941735 None:intergenic 35.0%
TCCATAAGCACTACATATTC+TGG - chr7.4:75944351-75944370 None:intergenic 35.0%
TCTACGAGAAGCCATTATTT+GGG + chr7.4:75942938-75942957 MS.gene74113:CDS 35.0%
TCTCTGAATGATTGTCTTTG+TGG - chr7.4:75939975-75939994 None:intergenic 35.0%
TGTAGCTTTCCTTCAAAATC+AGG - chr7.4:75940020-75940039 None:intergenic 35.0%
TTAATCTGTATCATTCTCCC+CGG - chr7.4:75944039-75944058 None:intergenic 35.0%
TTGTAAAAACTCACTCCAAG+CGG - chr7.4:75942667-75942686 None:intergenic 35.0%
TTTGACAAAGGAGTAGGTAT+TGG - chr7.4:75941209-75941228 None:intergenic 35.0%
! AAAACTTTTGTGTGCTTGCT+CGG - chr7.4:75942325-75942344 None:intergenic 35.0%
! AAATGTGGTGTCAAACTACA+TGG + chr7.4:75940958-75940977 MS.gene74113:intron 35.0%
! AACTTGGCATTTGGTTGTTT+TGG - chr7.4:75943846-75943865 None:intergenic 35.0%
! ACCATGACATTTGAAACACT+TGG - chr7.4:75940639-75940658 None:intergenic 35.0%
! ACTGCATTTAAAACCAGAGA+TGG + chr7.4:75941847-75941866 MS.gene74113:intron 35.0%
! AGTAGTGGAATATGAGGTAA+GGG - chr7.4:75944127-75944146 None:intergenic 35.0%
! ATCGATCTTTGAAAAGATGG+TGG - chr7.4:75941776-75941795 None:intergenic 35.0%
! CATGAGGGATTTTTGTTCAA+AGG + chr7.4:75942888-75942907 MS.gene74113:CDS 35.0%
! CATTGTAGTTTGTAAGGATG+AGG - chr7.4:75941016-75941035 None:intergenic 35.0%
! CATTTTCCAGTAGCTTGATT+AGG - chr7.4:75943576-75943595 None:intergenic 35.0%
! CTATCAGAAGTGATGGTTTT+TGG - chr7.4:75943341-75943360 None:intergenic 35.0%
! CTCACATCATGAATTGACTT+TGG - chr7.4:75942198-75942217 None:intergenic 35.0%
! CTGCATTTTCTTCGAACAAT+AGG - chr7.4:75941372-75941391 None:intergenic 35.0%
! GAAGCTGTTAACAGGATTTT+GGG + chr7.4:75943464-75943483 MS.gene74113:intron 35.0%
! GTTGAGCTTTTCACTAAAGA+AGG - chr7.4:75942481-75942500 None:intergenic 35.0%
! TACTGGAAAATGTCCTTTTG+AGG + chr7.4:75943584-75943603 MS.gene74113:CDS 35.0%
! TAGACATCTCTTTCAAGTCT+TGG - chr7.4:75943041-75943060 None:intergenic 35.0%
! TAGTAGAGTAGTGGAATATG+AGG - chr7.4:75944133-75944152 None:intergenic 35.0%
! TGAAGCTGTTAACAGGATTT+TGG + chr7.4:75943463-75943482 MS.gene74113:intron 35.0%
! TGCCTTGTGAATTTTTCCAT+TGG + chr7.4:75941073-75941092 MS.gene74113:intron 35.0%
! TTGAAACACTTGGTAGCTTT+GGG - chr7.4:75940629-75940648 None:intergenic 35.0%
! TTGAGCCATTGTAGTTTGTA+AGG - chr7.4:75941022-75941041 None:intergenic 35.0%
! TTTGAAACACTTGGTAGCTT+TGG - chr7.4:75940630-75940649 None:intergenic 35.0%
! TTTTTATCAAGTTCACTCGG+TGG - chr7.4:75941262-75941281 None:intergenic 35.0%
!! AGCTTATGAAGAAGTTGATG+AGG + chr7.4:75940718-75940737 MS.gene74113:intron 35.0%
!! AGTTGCTGACTTATACTTCA+AGG + chr7.4:75943292-75943311 MS.gene74113:intron 35.0%
!! ATTTTAGTCCCCAAAAAGGA+TGG + chr7.4:75941646-75941665 MS.gene74113:intron 35.0%
!! ATTTTTGGAGAACCTTATGG+AGG + chr7.4:75943381-75943400 MS.gene74113:intron 35.0%
!! CATGCTATTGACTTTATTCC+TGG + chr7.4:75941493-75941512 MS.gene74113:intron 35.0%
!! TACCCAAGAAGCATTCTTAT+AGG + chr7.4:75940501-75940520 MS.gene74113:CDS 35.0%
!! TGCAATTTTAGTCCCCAAAA+AGG + chr7.4:75941642-75941661 MS.gene74113:intron 35.0%
!! TTTTTGGGGACTAAAATTGC+AGG - chr7.4:75941643-75941662 None:intergenic 35.0%
!!! CTTCTTTTTCAGGTTCATCT+TGG - chr7.4:75940751-75940770 None:intergenic 35.0%
!!! GAAGGTTTTGTAGAAGTACT+AGG - chr7.4:75940581-75940600 None:intergenic 35.0%
!!! GCATCATTAGTCTTTTGACA+TGG - chr7.4:75943266-75943285 None:intergenic 35.0%
!!! GTCATTTTTGGAGAACCTTA+TGG + chr7.4:75943378-75943397 MS.gene74113:intron 35.0%
!!! TGATCTTGCTTTTTCCTTCA+CGG - chr7.4:75940190-75940209 None:intergenic 35.0%
AAAACAGTGGGATCTCATCT+TGG + chr7.4:75943520-75943539 MS.gene74113:intron 40.0%
AAAATTGCAGGAACAGCACA+AGG - chr7.4:75941631-75941650 None:intergenic 40.0%
AAATTGCAGGAACAGCACAA+GGG - chr7.4:75941630-75941649 None:intergenic 40.0%
AACATCCCTATCAGAAGTGA+TGG - chr7.4:75943348-75943367 None:intergenic 40.0%
AAGGCCAAAAGCCAAAAATC+TGG + chr7.4:75943098-75943117 MS.gene74113:intron 40.0%
AATCCTTGTGGAACATCTTC+TGG - chr7.4:75941451-75941470 None:intergenic 40.0%
ACATCTTCTGGTACAACATC+TGG - chr7.4:75941439-75941458 None:intergenic 40.0%
ACCTAAGAAAGTAACCTCGT+TGG - chr7.4:75942106-75942125 None:intergenic 40.0%
ACCTACTCCTTTGTCAAAGA+TGG + chr7.4:75941211-75941230 MS.gene74113:intron 40.0%
ACCTGTTAATCCTCCATCAT+GGG - chr7.4:75942967-75942986 None:intergenic 40.0%
ACTTTGTCCTTGGATTACCT+CGG + chr7.4:75943174-75943193 MS.gene74113:intron 40.0%
AGAACCTTATGGAGGAAGAT+GGG + chr7.4:75943389-75943408 MS.gene74113:intron 40.0%
AGAAGATGACATGCATCCAT+TGG - chr7.4:75941136-75941155 None:intergenic 40.0%
AGCCAATCAATGAACTCATC+TGG - chr7.4:75940044-75940063 None:intergenic 40.0%
AGGTTGAAGCCATCAATAGT+TGG + chr7.4:75942166-75942185 MS.gene74113:intron 40.0%
ATAAGAAGAATTCTCAGCGG+AGG - chr7.4:75940534-75940553 None:intergenic 40.0%
ATAGTGATGGTTCTTCGTGT+TGG - chr7.4:75940686-75940705 None:intergenic 40.0%
ATCATGGGCTTCCCAAATAA+TGG - chr7.4:75942952-75942971 None:intergenic 40.0%
ATGGAAACTTTGTGGTTGAG+TGG + chr7.4:75944366-75944385 MS.gene74113:CDS 40.0%
ATTATTTGGGAAGCCCATGA+TGG + chr7.4:75942951-75942970 MS.gene74113:CDS 40.0%
CAAACAATAGCTCGTTACCT+TGG + chr7.4:75940383-75940402 MS.gene74113:CDS 40.0%
CAACAAAGGTAGTGAAGTGA+AGG + chr7.4:75941039-75941058 MS.gene74113:intron 40.0%
CAAGTACTTCGACCATTCAT+TGG + chr7.4:75941940-75941959 MS.gene74113:intron 40.0%
CAGTATTGTTGGAGTTGAAC+TGG - chr7.4:75940434-75940453 None:intergenic 40.0%
CAGTGGTAGTTGTGAAAATG+TGG + chr7.4:75940943-75940962 MS.gene74113:intron 40.0%
CAGTTCAACTCCAACAATAC+TGG + chr7.4:75940432-75940451 MS.gene74113:CDS 40.0%
CATGATGTGAGAAGTTTCCA+TGG + chr7.4:75942207-75942226 MS.gene74113:intron 40.0%
CATTTGCATAGTGGCAAGTA+GGG - chr7.4:75942763-75942782 None:intergenic 40.0%
CCCTTTATGCAATCTGTAAG+CGG - chr7.4:75942285-75942304 None:intergenic 40.0%
CCGCTTACAGATTGCATAAA+GGG + chr7.4:75942282-75942301 MS.gene74113:intron 40.0%
CCTTTATGCAATCTGTAAGC+GGG - chr7.4:75942284-75942303 None:intergenic 40.0%
CGTCTAATGACCAGTATTGT+TGG - chr7.4:75940445-75940464 None:intergenic 40.0%
CTACCATCACATAATCCTTC+TGG - chr7.4:75943208-75943227 None:intergenic 40.0%
CTCATTTGAGAGTTAGAGAG+TGG + chr7.4:75944305-75944324 MS.gene74113:intron 40.0%
CTCTACGAGAAGCCATTATT+TGG + chr7.4:75942937-75942956 MS.gene74113:CDS 40.0%
CTTGATCTACAGCATACACA+AGG + chr7.4:75941993-75942012 MS.gene74113:intron 40.0%
CTTTATGCAATCTGTAAGCG+GGG - chr7.4:75942283-75942302 None:intergenic 40.0%
GAAGTGCGACATTCATGAAA+GGG + chr7.4:75940355-75940374 MS.gene74113:CDS 40.0%
GAAGTGGATACCATCAAATC+AGG + chr7.4:75941800-75941819 MS.gene74113:intron 40.0%
GAATTCGCAACTACAAGGAA+AGG + chr7.4:75944528-75944547 MS.gene74113:CDS 40.0%
GACAAACTGAAGCTGTTAAC+AGG + chr7.4:75943456-75943475 MS.gene74113:intron 40.0%
GACTCAGTTCAAAGAAGCTT+TGG + chr7.4:75941321-75941340 MS.gene74113:intron 40.0%
GATACCATCAAATCAGGCTT+AGG + chr7.4:75941806-75941825 MS.gene74113:intron 40.0%
GCCAGAATATGTAGTGCTTA+TGG + chr7.4:75944347-75944366 MS.gene74113:CDS 40.0%
GCTGAAGAAAGGACTAATAC+AGG + chr7.4:75941594-75941613 MS.gene74113:intron 40.0%
GGATTATGTGATGGTAGTTG+TGG + chr7.4:75943211-75943230 MS.gene74113:intron 40.0%
GGGATAAGAAGAATTCTCAG+CGG - chr7.4:75940537-75940556 None:intergenic 40.0%
GGTTACATAATCACTGCTGA+AGG + chr7.4:75942123-75942142 MS.gene74113:intron 40.0%
GTAATGACTCCAATGTTGCA+AGG - chr7.4:75942559-75942578 None:intergenic 40.0%
GTGATTTCAACATGCTCTTG+TGG - chr7.4:75941556-75941575 None:intergenic 40.0%
TAATCTGTATCATTCTCCCC+GGG - chr7.4:75944038-75944057 None:intergenic 40.0%
TATAGTAATCCTAGAGGCCA+TGG - chr7.4:75944226-75944245 None:intergenic 40.0%
TATTCGTTTAGCCATACGAG+TGG + chr7.4:75940469-75940488 MS.gene74113:CDS 40.0%
TCAAAGATCGATCTTCGAAG+TGG + chr7.4:75941784-75941803 MS.gene74113:intron 40.0%
TCAAGTTCAACCTCCAGATA+TGG - chr7.4:75943987-75944006 None:intergenic 40.0%
TCATTTGCATAGTGGCAAGT+AGG - chr7.4:75942764-75942783 None:intergenic 40.0%
TCCATCTTTGACAAAGGAGT+AGG - chr7.4:75941215-75941234 None:intergenic 40.0%
TGAAGTGCGACATTCATGAA+AGG + chr7.4:75940354-75940373 MS.gene74113:CDS 40.0%
TGGAATAGGCCAACTATTGA+TGG - chr7.4:75942178-75942197 None:intergenic 40.0%
TGTGGACTCATTCTATAAGC+TGG - chr7.4:75941538-75941557 None:intergenic 40.0%
TTCAGTTTGTCCATCTGTCT+GGG - chr7.4:75943447-75943466 None:intergenic 40.0%
TTGATTCATGAGACGCATGA+AGG - chr7.4:75941923-75941942 None:intergenic 40.0%
! AAGCACTACATATTCTGGCT+CGG - chr7.4:75944346-75944365 None:intergenic 40.0%
! ACCAACGAGGTTACTTTCTT+AGG + chr7.4:75942102-75942121 MS.gene74113:intron 40.0%
! AGAAAGTAACCTCGTTGGTT+AGG - chr7.4:75942101-75942120 None:intergenic 40.0%
! AGTGGTGGAATATGAGGTAA+GGG - chr7.4:75944071-75944090 None:intergenic 40.0%
! ATCACAAACTTTTCCAGCAG+TGG - chr7.4:75940912-75940931 None:intergenic 40.0%
! ATTGGCTCCAAACTGTTGAA+CGG + chr7.4:75940057-75940076 MS.gene74113:CDS 40.0%
! GAGTAGTGGAATATGAGGTA+AGG - chr7.4:75944128-75944147 None:intergenic 40.0%
! GGAGCATTAGATAACCCAAA+GGG - chr7.4:75941895-75941914 None:intergenic 40.0%
! GGAGGATTAACAGGTCATTT+TGG + chr7.4:75942972-75942991 MS.gene74113:intron 40.0%
! TAGTAGAGTGGTGGAATATG+AGG - chr7.4:75944077-75944096 None:intergenic 40.0%
! TGGAGCATTAGATAACCCAA+AGG - chr7.4:75941896-75941915 None:intergenic 40.0%
! TTAGAGAGTGGATTCTCTCT+TGG + chr7.4:75944317-75944336 MS.gene74113:CDS 40.0%
! TTCGCCTTTGATGATAGTGA+TGG - chr7.4:75940699-75940718 None:intergenic 40.0%
!! AGAGCACTGAGGAATACATA+AGG - chr7.4:75942919-75942938 None:intergenic 40.0%
!! CTGATCGTTGTCTGTTTTTC+GGG - chr7.4:75940558-75940577 None:intergenic 40.0%
!! GATGATGGAGTCAAGTCTAA+CGG - chr7.4:75943636-75943655 None:intergenic 40.0%
!! GCTGATCGTTGTCTGTTTTT+CGG - chr7.4:75940559-75940578 None:intergenic 40.0%
!! GGATTTTGGGAAACCTACTT+CGG + chr7.4:75943477-75943496 MS.gene74113:intron 40.0%
!! TGATCGTTGTCTGTTTTTCG+GGG - chr7.4:75940557-75940576 None:intergenic 40.0%
!!! AGATTTTTGGCTTTTGGCCT+TGG - chr7.4:75943099-75943118 None:intergenic 40.0%
!!! CTCTATAGCTTTGCTGGTTT+TGG + chr7.4:75944568-75944587 MS.gene74113:intron 40.0%
!!! GATCTTGCTTTTTCCTTCAC+GGG - chr7.4:75940189-75940208 None:intergenic 40.0%
!!! TGTCCTTTTGAGGTAGCATA+CGG + chr7.4:75943594-75943613 MS.gene74113:CDS 40.0%
AAGATGTCGAGTCTGCCATT+TGG + chr7.4:75943073-75943092 MS.gene74113:intron 45.0%
AAGTTGTCACCAAGAGCTGA+TGG + chr7.4:75943861-75943880 MS.gene74113:CDS 45.0%
AATGGACAGTGATGCCCTTT+GGG + chr7.4:75941878-75941897 MS.gene74113:intron 45.0%
ACAATAGCTCGTTACCTTGG+TGG + chr7.4:75940386-75940405 MS.gene74113:CDS 45.0%
ACCTTGGGAAGATGTTAGCA+TGG + chr7.4:75943151-75943170 MS.gene74113:intron 45.0%
ACGCCAGAAGGATTATGTGA+TGG + chr7.4:75943202-75943221 MS.gene74113:intron 45.0%
AGTACCCATCTTCCTCCATA+AGG - chr7.4:75943396-75943415 None:intergenic 45.0%
AGTTGTGACGCTTCCAATTC+AGG + chr7.4:75942417-75942436 MS.gene74113:CDS 45.0%
ATGAGGTAAGGGATGATGCA+AGG - chr7.4:75944060-75944079 None:intergenic 45.0%
ATGTCTGTAGTAGTCCTGAG+AGG - chr7.4:75942871-75942890 None:intergenic 45.0%
ATGTTCCTTCCTAACCAACG+AGG + chr7.4:75942089-75942108 MS.gene74113:intron 45.0%
ATTCAGAGACAGCGACATCA+AGG + chr7.4:75939986-75940005 MS.gene74113:CDS 45.0%
ATTCCTCGGAATTCGAGAAG+TGG - chr7.4:75944512-75944531 None:intergenic 45.0%
CAAAGACCCGTTCAACAGTT+TGG - chr7.4:75940067-75940086 None:intergenic 45.0%
CAACCTCCAGATATGGTGAA+AGG - chr7.4:75943980-75943999 None:intergenic 45.0%
CACAACTTACTTCGAACACC+TGG - chr7.4:75942404-75942423 None:intergenic 45.0%
CAGGACTACTACAGACATGA+GGG + chr7.4:75942873-75942892 MS.gene74113:CDS 45.0%
CATCAAATCAGGCTTAGGTC+AGG + chr7.4:75941811-75941830 MS.gene74113:intron 45.0%
CATGGAAGAGTTTCGCAGAA+AGG - chr7.4:75944472-75944491 None:intergenic 45.0%
CCCGCTTACAGATTGCATAA+AGG + chr7.4:75942281-75942300 MS.gene74113:intron 45.0%
CCTTGTAGTTGCGAATTCCT+CGG - chr7.4:75944526-75944545 None:intergenic 45.0%
CGTCAGTGTTTAATCCACCA+AGG - chr7.4:75940403-75940422 None:intergenic 45.0%
CTATTAGGAATGACAGCTCC+AGG - chr7.4:75941514-75941533 None:intergenic 45.0%
CTCCAGATATGGTGAAAGGT+CGG - chr7.4:75943976-75943995 None:intergenic 45.0%
CTGAGAGGATTGTGAATCAG+TGG - chr7.4:75942856-75942875 None:intergenic 45.0%
CTTCAGTTTGTCCATCTGTC+TGG - chr7.4:75943448-75943467 None:intergenic 45.0%
GACCTGTTAATCCTCCATCA+TGG - chr7.4:75942968-75942987 None:intergenic 45.0%
GACGCTTCCAATTCAGGAAT+TGG + chr7.4:75942423-75942442 MS.gene74113:CDS 45.0%
GAGAACCTTATGGAGGAAGA+TGG + chr7.4:75943388-75943407 MS.gene74113:intron 45.0%
GAGCTCATTGTTGCTGATCA+TGG + chr7.4:75940797-75940816 MS.gene74113:intron 45.0%
GATCTACAGCATACACAAGG+AGG + chr7.4:75941996-75942015 MS.gene74113:intron 45.0%
GATGACTAGCACTACTGAAC+TGG - chr7.4:75943424-75943443 None:intergenic 45.0%
GATGCAAACTCTCCTTGTCA+TGG - chr7.4:75944490-75944509 None:intergenic 45.0%
GATGCATGTCATCTTCTCCT+TGG + chr7.4:75941139-75941158 MS.gene74113:intron 45.0%
GCATGTTGAATGTCTCGCAT+TGG - chr7.4:75941478-75941497 None:intergenic 45.0%
GCTTACAAGGTAGAATTGCC+AGG + chr7.4:75943918-75943937 MS.gene74113:intron 45.0%
GGATGAGGATGACTTTGTGT+TGG - chr7.4:75941001-75941020 None:intergenic 45.0%
GTACCAGAAGATGTTCCACA+AGG + chr7.4:75941445-75941464 MS.gene74113:intron 45.0%
GTAGAATTGCCAGGAACCTA+TGG + chr7.4:75943927-75943946 MS.gene74113:intron 45.0%
GTTAGCATGGACTTTGTCCT+TGG + chr7.4:75943164-75943183 MS.gene74113:intron 45.0%
GTTCCGTATGCTACCTCAAA+AGG - chr7.4:75943600-75943619 None:intergenic 45.0%
TCAGGACTACTACAGACATG+AGG + chr7.4:75942872-75942891 MS.gene74113:CDS 45.0%
TCAGTTTGTCCATCTGTCTG+GGG - chr7.4:75943446-75943465 None:intergenic 45.0%
TCCATGCTAACATCTTCCCA+AGG - chr7.4:75943155-75943174 None:intergenic 45.0%
TCGAACACCTGGTCAAAGTT+GGG - chr7.4:75942393-75942412 None:intergenic 45.0%
TGAAAGGTCGGCAACATTGA+AGG - chr7.4:75943964-75943983 None:intergenic 45.0%
TGATGGCTTCAACCTTGCTA+GGG - chr7.4:75942161-75942180 None:intergenic 45.0%
TGCATGAACAAGTTCGCCAA+CGG + chr7.4:75943712-75943731 MS.gene74113:CDS 45.0%
TGCGAAACTCTTCCATGACA+AGG + chr7.4:75944475-75944494 MS.gene74113:CDS 45.0%
TGTTGAATGTCTCGCATTGG+CGG - chr7.4:75941475-75941494 None:intergenic 45.0%
TTCCAATTCAGGAATTGGCG+CGG + chr7.4:75942428-75942447 MS.gene74113:CDS 45.0%
TTCGAACACCTGGTCAAAGT+TGG - chr7.4:75942394-75942413 None:intergenic 45.0%
TTGAAAGGACCATCAGCTCT+TGG - chr7.4:75943873-75943892 None:intergenic 45.0%
TTGGCTCCAAACTGTTGAAC+GGG + chr7.4:75940058-75940077 MS.gene74113:CDS 45.0%
TTGGTGTGATGTCGTTCCAA+TGG + chr7.4:75941117-75941136 MS.gene74113:intron 45.0%
TTGTTGCAGATGCTCTTAGC+AGG + chr7.4:75942730-75942749 MS.gene74113:CDS 45.0%
TTTCAACTACCATGGCCTCT+AGG + chr7.4:75944214-75944233 MS.gene74113:intron 45.0%
! AACCTACTTCGGAGCTTTGT+CGG + chr7.4:75943488-75943507 MS.gene74113:intron 45.0%
! AGTAACCTCGTTGGTTAGGA+AGG - chr7.4:75942097-75942116 None:intergenic 45.0%
! ATCAGCTCTTGGTGACAACT+TGG - chr7.4:75943862-75943881 None:intergenic 45.0%
! CATTGGATTTGAGACAGCCA+AGG + chr7.4:75942788-75942807 MS.gene74113:CDS 45.0%
! CTCCAGCTTCCATCCTTTTT+GGG - chr7.4:75941658-75941677 None:intergenic 45.0%
! CTGACCTAAGCCTGATTTGA+TGG - chr7.4:75941813-75941832 None:intergenic 45.0%
! CTTGGTGACAACTTGGCATT+TGG - chr7.4:75943855-75943874 None:intergenic 45.0%
! GAGTGGTGGAATATGAGGTA+AGG - chr7.4:75944072-75944091 None:intergenic 45.0%
! TCAAGTTCACTCGGTGGTAA+TGG - chr7.4:75941256-75941275 None:intergenic 45.0%
! TCCAGCTTCCATCCTTTTTG+GGG - chr7.4:75941657-75941676 None:intergenic 45.0%
! TCTCCAGCTTCCATCCTTTT+TGG - chr7.4:75941659-75941678 None:intergenic 45.0%
! TGGCTACTCTATAGCTTTGC+TGG + chr7.4:75944562-75944581 MS.gene74113:intron 45.0%
! TGTCAAACATGGTGGCTTGT+TGG - chr7.4:75944168-75944187 None:intergenic 45.0%
! TGTCAGCTCAAGAAGAGCAT+TGG + chr7.4:75940855-75940874 MS.gene74113:intron 45.0%
! TTGATGGCTTCAACCTTGCT+AGG - chr7.4:75942162-75942181 None:intergenic 45.0%
!! ATGAGACGCATGAAGGTACT+TGG - chr7.4:75941916-75941935 None:intergenic 45.0%
!! CACTGATTCACAATCCTCTC+AGG + chr7.4:75942854-75942873 MS.gene74113:CDS 45.0%
!! CTCAAGAAGAGCATTGGTTG+AGG + chr7.4:75940861-75940880 MS.gene74113:intron 45.0%
!! TATTCGAGTTGACCCTAGCA+AGG + chr7.4:75942146-75942165 MS.gene74113:intron 45.0%
!! TCTGTAGTGGGTTTAGGAGA+AGG - chr7.4:75940599-75940618 None:intergenic 45.0%
!!! ATAGCTTTGCTGGTTTTGGC+TGG + chr7.4:75944572-75944591 MS.gene74113:intron 45.0%
!!! TAGCTTTGCTGGTTTTGGCT+GGG + chr7.4:75944573-75944592 MS.gene74113:intron 45.0%
AACCGCGCCAATTCCTGAAT+TGG - chr7.4:75942433-75942452 None:intergenic 50.0%
ACACCTGGTCAAAGTTGGGA+AGG - chr7.4:75942389-75942408 None:intergenic 50.0%
AGGACGAGTTCTGTTCAACC+CGG + chr7.4:75944017-75944036 MS.gene74113:intron 50.0%
ATCTTCTCCTTGGAAGACCC+TGG + chr7.4:75941149-75941168 MS.gene74113:intron 50.0%
ATGTTGCAAGGCTCGGACAA+TGG - chr7.4:75942547-75942566 None:intergenic 50.0%
ATTTGGGAAGCCCATGATGG+AGG + chr7.4:75942954-75942973 MS.gene74113:CDS 50.0%
CACCTGGTCAAAGTTGGGAA+GGG - chr7.4:75942388-75942407 None:intergenic 50.0%
CATCCACTTCTCGAATTCCG+AGG + chr7.4:75944506-75944525 MS.gene74113:CDS 50.0%
CCGAGGAATTCGCAACTACA+AGG + chr7.4:75944523-75944542 MS.gene74113:CDS 50.0%
CGACCTTTCACCATATCTGG+AGG + chr7.4:75943974-75943993 MS.gene74113:intron 50.0%
GAAGGTTGCTGAGACACCAT+AGG - chr7.4:75943946-75943965 None:intergenic 50.0%
GAATGGACAGTGATGCCCTT+TGG + chr7.4:75941877-75941896 MS.gene74113:intron 50.0%
GACTCCAATGTTGCAAGGCT+CGG - chr7.4:75942554-75942573 None:intergenic 50.0%
GGAAGAGTTTCGCAGAAAGG+TGG - chr7.4:75944469-75944488 None:intergenic 50.0%
GGCTTAGGTCAGGAGATGAA+TGG + chr7.4:75941821-75941840 MS.gene74113:intron 50.0%
GGTAAGGGATGATGCAAGGT+AGG - chr7.4:75944112-75944131 None:intergenic 50.0%
GTGCGACATTCATGAAAGGG+AGG + chr7.4:75940358-75940377 MS.gene74113:CDS 50.0%
GTTGAGTCCGAGGTAATCCA+AGG - chr7.4:75943184-75943203 None:intergenic 50.0%
TACCGACAAAGCTCCGAAGT+AGG - chr7.4:75943493-75943512 None:intergenic 50.0%
TCCCCAAAAAGGATGGAAGC+TGG + chr7.4:75941653-75941672 MS.gene74113:intron 50.0%
TGCCGACCTTTCACCATATC+TGG + chr7.4:75943971-75943990 MS.gene74113:intron 50.0%
TGCTGATCATGGCAAGTCTC+TGG + chr7.4:75940808-75940827 MS.gene74113:intron 50.0%
TTGTCCGAGCCTTGCAACAT+TGG + chr7.4:75942547-75942566 MS.gene74113:CDS 50.0%
! ACATCTTCCCAAGGTGCTTC+TGG - chr7.4:75943146-75943165 None:intergenic 50.0%
! GCCCATGATGGAGGATTAAC+AGG + chr7.4:75942963-75942982 MS.gene74113:CDS 50.0%
!! GTCAAGTCTAACGGACTGTG+TGG - chr7.4:75943627-75943646 None:intergenic 50.0%
AAAACGAAGCGAGCCCGTGA+AGG + chr7.4:75940173-75940192 MS.gene74113:CDS 55.0%
AGCCCTTCCCAACTTTGACC+AGG + chr7.4:75942383-75942402 MS.gene74113:CDS 55.0%
CAGCAGTGGTGCAACGAGTA+TGG - chr7.4:75940898-75940917 None:intergenic 55.0%
CATACTCGTTGCACCACTGC+TGG + chr7.4:75940896-75940915 MS.gene74113:intron 55.0%
CGTATTGCCAGGGTCTTCCA+AGG - chr7.4:75941159-75941178 None:intergenic 55.0%
CTTGAGCTGACATCGCGTGT+AGG - chr7.4:75940847-75940866 None:intergenic 55.0%
GACGAGTTCTGTTCAACCCG+GGG + chr7.4:75944019-75944038 MS.gene74113:intron 55.0%
GCACGACGATCGTATTGCCA+GGG - chr7.4:75941169-75941188 None:intergenic 55.0%
GCTAGTCATCCCCAGACAGA+TGG + chr7.4:75943434-75943453 MS.gene74113:intron 55.0%
GCTGAGACACCATAGGTTCC+TGG - chr7.4:75943939-75943958 None:intergenic 55.0%
GGACGAGTTCTGTTCAACCC+GGG + chr7.4:75944018-75944037 MS.gene74113:intron 55.0%
GGCGCGGTTCTATGTCAAGA+AGG + chr7.4:75942444-75942463 MS.gene74113:CDS 55.0%
TCGCAGAAAGGTGGCGATTG+AGG - chr7.4:75944460-75944479 None:intergenic 55.0%
! AAGTTGGGAAGGGCTAGCAC+TGG - chr7.4:75942378-75942397 None:intergenic 55.0%
! TCGAGTCTGCCATTTGGCCA+AGG + chr7.4:75943079-75943098 MS.gene74113:intron 55.0%
!! CCCAAGGTGCTTCTGGAACA+GGG - chr7.4:75943139-75943158 None:intergenic 55.0%
!! CCCTGTTCCAGAAGCACCTT+GGG + chr7.4:75943136-75943155 MS.gene74113:intron 55.0%
!! GCTTCTCGTAGAGAGCACTG+AGG - chr7.4:75942930-75942949 None:intergenic 55.0%
!! TCCCAAGGTGCTTCTGGAAC+AGG - chr7.4:75943140-75943159 None:intergenic 55.0%
!! TCCCTGTTCCAGAAGCACCT+TGG + chr7.4:75943135-75943154 MS.gene74113:intron 55.0%
!!! GGCTTTTGGCCTTGGCCAAA+TGG - chr7.4:75943091-75943110 None:intergenic 55.0%
ACCTCGGACTCAACGCCAGA+AGG + chr7.4:75943190-75943209 MS.gene74113:intron 60.0%
CACTCCAAGCGGCATGTCTG+CGG - chr7.4:75942656-75942675 None:intergenic 60.0%
GGCACGACGATCGTATTGCC+AGG - chr7.4:75941170-75941189 None:intergenic 60.0%
TCAACCGCAGACATGCCGCT+TGG + chr7.4:75942649-75942668 MS.gene74113:CDS 60.0%
TGTGTGCTTGCTCGGCCCAT+TGG - chr7.4:75942317-75942336 None:intergenic 60.0%
! CGCATTGGCGGCAATCCTTG+TGG - chr7.4:75941463-75941482 None:intergenic 60.0%
! TCCTTCTGGCGTTGAGTCCG+AGG - chr7.4:75943194-75943213 None:intergenic 60.0%
!! GGTGCTTCTGGAACAGGGAG+TGG - chr7.4:75943134-75943153 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 75939915 75944656 75939915 ID=MS.gene74113
chr7.4 mRNA 75939915 75944656 75939915 ID=MS.gene74113.t1;Parent=MS.gene74113
chr7.4 exon 75939915 75940581 75939915 ID=MS.gene74113.t1.exon1;Parent=MS.gene74113.t1
chr7.4 CDS 75939915 75940581 75939915 ID=cds.MS.gene74113.t1;Parent=MS.gene74113.t1
chr7.4 exon 75942292 75942984 75942292 ID=MS.gene74113.t1.exon2;Parent=MS.gene74113.t1
chr7.4 CDS 75942292 75942984 75942292 ID=cds.MS.gene74113.t1;Parent=MS.gene74113.t1
chr7.4 exon 75943583 75943926 75943583 ID=MS.gene74113.t1.exon3;Parent=MS.gene74113.t1
chr7.4 CDS 75943583 75943926 75943583 ID=cds.MS.gene74113.t1;Parent=MS.gene74113.t1
chr7.4 exon 75944317 75944549 75944317 ID=MS.gene74113.t1.exon4;Parent=MS.gene74113.t1
chr7.4 CDS 75944317 75944549 75944317 ID=cds.MS.gene74113.t1;Parent=MS.gene74113.t1
chr7.4 exon 75944653 75944656 75944653 ID=MS.gene74113.t1.exon5;Parent=MS.gene74113.t1
chr7.4 CDS 75944653 75944656 75944653 ID=cds.MS.gene74113.t1;Parent=MS.gene74113.t1
Gene Sequence

>MS.gene74113

ATGCAATCAGACGTTGATGAATCAAGTAGCGAATCATCATCATTAAGAAGTCGTCGTCCACAAAGACAATCATTCAGAGACAGCGACATCAAGGTAGATATTCCTGATTTTGAAGGAAAGCTACATCCAGATGAGTTCATTGATTGGCTCCAAACTGTTGAACGGGTCTTTGAGTATAAAGAGATACTTGAAGAAAAGAAAGTGAAGATCATTGCTGTCAAATTGAAGAAACATGCTTCAATTTGGTGGGAAAATCTAAAAACGAAGCGAGCCCGTGAAGGAAAAAGCAAGATCAAGACTTGGGAAAAGATGCGTCGAGAACTAAGCAAAAAGTTCTTACCTTCTCACTATTATCAAGATAATTTTATTCAACTACAGAACTTTCGTAAAAAAAACTTGTCTGTAGAAGAATACACTAGAGAATTTGAGAAGTTAATGATGAAGTGCGACATTCATGAAAGGGAGGAGCAAACAATAGCTCGTTACCTTGGTGGATTAAACACTGACGTTGCTCATCCAGTTCAACTCCAACAATACTGGTCATTAGACGATGCTATTCGTTTAGCCATACGAGTGGAGAAACATTTACCCAAGAAGCATTCTTATAGGAACTTTTCCTCCGCTGAGAATTCTTCTTATCCCCGAAAAACAGACAACGATCAGCCTAGTACTTCTACAAAACCTTCTCCTAAACCCACTACAGAAAATAAACCCAAAGCTACCAAGTGTTTCAAATGTCATGGTTTTGGACATATAGCTTCAAATTGTCCAACACGAAGAACCATCACTATCATCAAAGGCGAAGCTTATGAAGAAGTTGATGAGGAAACAAACCAAGATGAACCTGAAAAAGAAGAAGAGTTAGAGCCAATTTATGATGAAGAGCTCATTGTTGCTGATCATGGCAAGTCTCTGGTGATCAGACGAAGCCTACACGCGATGTCAGCTCAAGAAGAGCATTGGTTGAGGAAAAACATTTTCCATACTCGTTGCACCACTGCTGGAAAAGTTTGTGATGTTATAATAGACAGTGGTAGTTGTGAAAATGTGGTGTCAAACTACATGGTAGAGAAGTTAAAGATGCCAACACAAAGTCATCCTCATCCTTACAAACTACAATGGCTCAACAAAGGTAGTGAAGTGAAGGTTACGAAGCGTTGCCTTGTGAATTTTTCCATTGGTCAGAAGTATCAAGATCAAGTTTGGTGTGATGTCGTTCCAATGGATGCATGTCATCTTCTCCTTGGAAGACCCTGGCAATACGATCGTCGTGCCCATCATGATTGTTATGCCAATACCTACTCCTTTGTCAAAGATGGAGTAAAAATCAAGTTAACTCCATTACCACCGAGTGAACTTGATAAAAACAAAAATGAGTCCAAGCCATTAGTGTCTTTAATCACTAAGACTCAGTTCAAAGAAGCTTTGGATGAAGTCCAAACCATGAGCTTTATCCTATTGTTCGAAGAAAATGCAGAAACTATCCTTCCAGTAGAAATTGAACAAATGCTCAGTGAATTTCCAGATGTTGTACCAGAAGATGTTCCACAAGGATTGCCGCCAATGCGAGACATTCAACATGCTATTGACTTTATTCCTGGAGCTGTCATTCCTAATAGACCAGCTTATAGAATGAGTCCACAAGAGCATGTTGAAATCACACGTCAAGTTGAAGAATTGCTGAAGAAAGGACTAATACAGGAAAGTGTTAGCCCTTGTGCTGTTCCTGCAATTTTAGTCCCCAAAAAGGATGGAAGCTGGAGAATGTGTGTTGATAGTCGAGCTGTCAACAAGATTACCATCAAGTATCGATTTCCGATACCTAGACTTGATGATTTATTAGATCAGTTGCATGGTGCCACCATCTTTTCAAAGATCGATCTTCGAAGTGGATACCATCAAATCAGGCTTAGGTCAGGAGATGAATGGAAGACTGCATTTAAAACCAGAGATGGTTTATATGAATGGACAGTGATGCCCTTTGGGTTATCTAATGCTCCAAGTACCTTCATGCGTCTCATGAATCAAGTACTTCGACCATTCATTGGCAAGTTTGTAGTGGTCTACTTTGACGATATCTTGATCTACAGCATACACAAGGAGGAACACTTAGAGCAGCTTCGACAAGTGTTACAAACTCTTCGCGAACAAAAACTCTATGCAAATTTGAAGAAATGTTCCTTCCTAACCAACGAGGTTACTTTCTTAGGTTACATAATCACTGCTGAAGGTATTCGAGTTGACCCTAGCAAGGTTGAAGCCATCAATAGTTGGCCTATTCCAAAGTCAATTCATGATGTGAGAAGTTTCCATGGATTAGCTTCATTTTATAGAAGGTTCATTAAGAATTTTAGCTCTGTTGCTGCCCCGCTTACAGATTGCATAAAGGGAGATCAATTCCAATGGGCCGAGCAAGCACACAAAAGTTTTGACAACCTAAAACAACTTTTGACTGAAACACCAGTGCTAGCCCTTCCCAACTTTGACCAGGTGTTCGAAGTAAGTTGTGACGCTTCCAATTCAGGAATTGGCGCGGTTCTATGTCAAGAAGGTCATCCTATAGCCTTCTTTAGTGAAAAGCTCAACAATGGTAAACTTAGATACTCAACCTATGATAAAGAATTTTATGCCATTGTCCGAGCCTTGCAACATTGGAGTCATTACTTGTTGAATAAAGAATTTATTCTTTATTCTGATCATGAAGCTCTCAAGCATTTGAATTCTCAACAAAAGATCAACCGCAGACATGCCGCTTGGAGTGAGTTTTTACAAGCTTATCCGTTCTTACTAAAACATAAGGCGGGAGTTCAAAATGTTGTTGCAGATGCTCTTAGCAGGCGTCATACCCTACTTGCCACTATGCAAATGAAAGTCATTGGATTTGAGACAGCCAAGGAGTTATACAAAGATGATCCAGATTTTCAAAAGTTTTGGAATGCCACTGATTCACAATCCTCTCAGGACTACTACAGACATGAGGGATTTTTGTTCAAAGGAAAAACCTTATGTATTCCTCAGTGCTCTCTACGAGAAGCCATTATTTGGGAAGCCCATGATGGAGGATTAACAGGTCATTTTGGACGAGATAAAACTGTTGCTTTAGTGAAAGAAAATTTCTATTGGCCAAGACTTGAAAGAGATGTCTACAAACATATTCAAAGATGTCGAGTCTGCCATTTGGCCAAGGCCAAAAGCCAAAAATCTGGTTTTTATATGCCACTCCCTGTTCCAGAAGCACCTTGGGAAGATGTTAGCATGGACTTTGTCCTTGGATTACCTCGGACTCAACGCCAGAAGGATTATGTGATGGTAGTTGTGGATAGATTTTCAAAGATGGCTCATTGCATCCCATGTCAAAAGACTAATGATGCCGTTCAAGTTGCTGACTTATACTTCAAGGAAATTGTTCGTCTTCATGGAATTCCAAAAACCATCACTTCTGATAGGGATGTTAAATTCTTAAGTCATTTTTGGAGAACCTTATGGAGGAAGATGGGTACTAAACTCCAGTTCAGTAGTGCTAGTCATCCCCAGACAGATGGACAAACTGAAGCTGTTAACAGGATTTTGGGAAACCTACTTCGGAGCTTTGTCGGTAAAAATCTAAAACAGTGGGATCTCATCTTGGCACAAGTTGAATTTGCATACAATAATTCAACCTAATCAAGCTACTGGAAAATGTCCTTTTGAGGTAGCATACGGAACTCGACCACACAGTCCGTTAGACTTGACTCCATCATCAGATAAACATCAGTATAGTGCAGATGCAGAAAGCAGAGCAAAAGAGATCAAGAAACTGCATGAACAAGTTCGCCAACGGATATTTCAGCAAAATTCACGATACAAGACTAATCGTGACAAGCACCGAAGACAACAAATCTTTAAAGTTGGAGATTTGGTATGGATACATTTGCGTAAAGAACGATTTCCAAAACAACCAAATGCCAAGTTGTCACCAAGAGCTGATGGTCCTTTCAAAATAGTACAAAAAATCAATGACAATGCTTACAAGGTAGAATTGCCAGGAACCTATGGTGTCTCAGCAACCTTCAATGTTGCCGACCTTTCACCATATCTGGAGGTTGAACTTGATATAAACTCGAGGACGAGTTCTGTTCAACCCGGGGAGAATGATACAGATTAATTGCATCATCCCTTACCTCATATTCCACCACTCTACTATTAACAATAAGTCCTACCTTGCATCATCCCTTACCTCATATTCCACTACTCTACTATTAACAATAAGGCCAACAAGCCACCATGTTTGACATTTACTAGTTTGTGTTTCCATTACTATTTCAACTACCATGGCCTCTAGGATTACTATAAATAAGGCCATTTCCTTCATGTATTCACACAATTTGAAATATACAAAAACTTGAGTTTTCTCATTTGAGAGTTAGAGAGTGGATTCTCTCTTGGCTTCCGAGCCAGAATATGTAGTGCTTATGGAAACTTTGTGGTTGAGTGGTTTTTAGAACAATTTACTGCATTTCGTTGTCCTACTCTCAACAAATCAATTATGAATGGTGTGAAATTCCTCAATCGCCACCTTTCTGCGAAACTCTTCCATGACAAGGAGAGTTTGCATCCACTTCTCGAATTCCGAGGAATTCGCAACTACAAGGAAAGGTATATATTTCTTGGCTACTCTATAGCTTTGCTGGTTTTGGCTGGGTTTTGCTTATTATTGTCTACTACACATTCTCTTAACTAAGCTATATTGATTTTGAAGCTAA

Protein sequence

>MS.gene74113.t1

MQSDVDESSSESSSLRSRRPQRQSFRDSDIKVDIPDFEGKLHPDEFIDWLQTVERVFEYKEILEEKKVKIIAVKLKKHASIWWENLKTKRAREGKSKIKTWEKMRRELSKKFLPSHYYQDNFIQLQNFRKKNLSVEEYTREFEKLMMKCDIHEREEQTIARYLGGLNTDVAHPVQLQQYWSLDDAIRLAIRVEKHLPKKHSYRNFSSAENSSYPRKTDNDQPNCIKGDQFQWAEQAHKSFDNLKQLLTETPVLALPNFDQVFEVSCDASNSGIGAVLCQEGHPIAFFSEKLNNGKLRYSTYDKEFYAIVRALQHWSHYLLNKEFILYSDHEALKHLNSQQKINRRHAAWSEFLQAYPFLLKHKAGVQNVVADALSRRHTLLATMQMKVIGFETAKELYKDDPDFQKFWNATDSQSSQDYYRHEGFLFKGKTLCIPQCSLREAIIWEAHDGGLTATGKCPFEVAYGTRPHSPLDLTPSSDKHQYSADAESRAKEIKKLHEQVRQRIFQQNSRYKTNRDKHRRQQIFKVGDLVWIHLRKERFPKQPNAKLSPRADGPFKIVQKINDNAYKLESGFSLGFRARICSAYGNFVVEWFLEQFTAFRCPTLNKSIMNGVKFLNRHLSAKLFHDKESLHPLLEFRGIRNYKES