Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74182.t1 | XP_003596089.2 | 98.8 | 249 | 3 | 0 | 1 | 249 | 144 | 392 | 6.10E-136 | 493.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74182.t1 | G7IQY1 | 98.8 | 249 | 3 | 0 | 1 | 249 | 144 | 392 | 4.4e-136 | 493.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051387 | MS.gene74182 | 0.805528 | 1.28E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATTAGTAATAGTATAAAT+AGG | + | 14711:8037-8056 | MS.gene74182:intergenic | 15.0% |
| !! | TTCATGATATGATAATTTAT+TGG | - | 14711:6607-6626 | MS.gene74182:intron | 15.0% |
| !! | TGAAATGAATCTATAATTGT+TGG | + | 14711:6913-6932 | MS.gene74182:intergenic | 20.0% |
| !!! | AAAATCATGAAGTTTGTTAA+GGG | - | 14711:7717-7736 | MS.gene74182:intron | 20.0% |
| !!! | ATTTGTTTTCCTATCTAATT+AGG | + | 14711:7483-7502 | MS.gene74182:intergenic | 20.0% |
| !!! | ATTTTTAGCAATTTATAGCT+AGG | + | 14711:6032-6051 | MS.gene74182:intergenic | 20.0% |
| !!! | GATATGTTTTATGTAATCAA+TGG | - | 14711:8512-8531 | MS.gene74182:CDS | 20.0% |
| !!! | TAAAATCATGAAGTTTGTTA+AGG | - | 14711:7716-7735 | MS.gene74182:intron | 20.0% |
| !!! | TGTTTGTTTTCCAAATTATA+AGG | + | 14711:7295-7314 | MS.gene74182:intergenic | 20.0% |
| !!! | TTTTATGTAATCAATGGTTT+AGG | - | 14711:8518-8537 | MS.gene74182:CDS | 20.0% |
| ! | AAAATTTCAGCTTACCTAAT+GGG | - | 14711:6500-6519 | MS.gene74182:intron | 25.0% |
| ! | AACAAAAAACAAGATACTTC+AGG | + | 14711:8477-8496 | MS.gene74182:intergenic | 25.0% |
| ! | AATAAAAAAATACCTGTCCT+TGG | + | 14711:6580-6599 | MS.gene74182:intergenic | 25.0% |
| ! | ACAACAAGTAGAATTGAAAT+AGG | + | 14711:8329-8348 | MS.gene74182:intergenic | 25.0% |
| ! | ACGAAAATGATGTCAAATAA+TGG | + | 14711:6989-7008 | MS.gene74182:intergenic | 25.0% |
| ! | ACTACAAATCCTAATTAGAT+AGG | - | 14711:7471-7490 | MS.gene74182:intron | 25.0% |
| ! | AGCAATGTCATCAATAATAA+TGG | - | 14711:6842-6861 | MS.gene74182:intron | 25.0% |
| ! | AGGTAAAAAATTTAGCATCA+CGG | + | 14711:8733-8752 | MS.gene74182:intergenic | 25.0% |
| ! | GATAGGAAAACAAATTGATA+TGG | - | 14711:7488-7507 | MS.gene74182:intron | 25.0% |
| ! | GTACCATATATTGAAATCAT+GGG | - | 14711:7929-7948 | MS.gene74182:intron | 25.0% |
| ! | TAAAATTTCAGCTTACCTAA+TGG | - | 14711:6499-6518 | MS.gene74182:intron | 25.0% |
| ! | TACCATATATTGAAATCATG+GGG | - | 14711:7930-7949 | MS.gene74182:intron | 25.0% |
| ! | TATTCCTTGTGAAATAAGAA+AGG | + | 14711:6238-6257 | MS.gene74182:intergenic | 25.0% |
| ! | TCAAATAGATGAAATAGACT+AGG | + | 14711:6652-6671 | MS.gene74182:intergenic | 25.0% |
| !! | AAGCTGAAATTTTATTAGGA+GGG | + | 14711:6493-6512 | MS.gene74182:intergenic | 25.0% |
| !! | AAGTAGAAAAACCAGTTTTT+GGG | + | 14711:6111-6130 | MS.gene74182:intergenic | 25.0% |
| !! | AGGTAAGCTGAAATTTTATT+AGG | + | 14711:6497-6516 | MS.gene74182:intergenic | 25.0% |
| !! | GTTCTTTTTGCCTTATAATT+TGG | - | 14711:7282-7301 | MS.gene74182:intron | 25.0% |
| !! | TAAGCTGAAATTTTATTAGG+AGG | + | 14711:6494-6513 | MS.gene74182:intergenic | 25.0% |
| !! | TAAGTAGAAAAACCAGTTTT+TGG | + | 14711:6112-6131 | MS.gene74182:intergenic | 25.0% |
| !!! | AAATCTTTGTTTTTTAGGCA+GGG | - | 14711:7015-7034 | MS.gene74182:intron | 25.0% |
| !!! | AATCTTATAATTTGCTCAAG+TGG | - | 14711:8805-8824 | MS.gene74182:intron | 25.0% |
| !!! | GCAGTAAATCTTTGTTTTTT+AGG | - | 14711:7010-7029 | MS.gene74182:intron | 25.0% |
| !!! | TAAATCTTTGTTTTTTAGGC+AGG | - | 14711:7014-7033 | MS.gene74182:intron | 25.0% |
| AAAACAAATTGATATGGCCT+GGG | - | 14711:7494-7513 | MS.gene74182:intron | 30.0% | |
| AACAGAAACAGTTTATTGTC+TGG | - | 14711:8409-8428 | MS.gene74182:intron | 30.0% | |
| AACCTAGAGATTAATAGCTT+AGG | + | 14711:8230-8249 | MS.gene74182:intergenic | 30.0% | |
| AACTTTAATAGGGCTAAAAG+AGG | + | 14711:7350-7369 | MS.gene74182:intergenic | 30.0% | |
| AAGATACTTCAGGTGAAAAA+AGG | + | 14711:8467-8486 | MS.gene74182:intergenic | 30.0% | |
| AAGTGTAACATGACTAAAAC+AGG | + | 14711:6056-6075 | MS.gene74182:intergenic | 30.0% | |
| ACAAAATGCATCAAAATGTC+CGG | + | 14711:6675-6694 | MS.gene74182:intergenic | 30.0% | |
| ACTCCAAATTCGAATCTAAT+AGG | - | 14711:8060-8079 | MS.gene74182:intron | 30.0% | |
| AGAAATAGAGAAGGACAAAA+TGG | - | 14711:7590-7609 | MS.gene74182:intron | 30.0% | |
| AGATACTTCAGGTGAAAAAA+GGG | + | 14711:8466-8485 | MS.gene74182:intergenic | 30.0% | |
| AGTGTAACATGACTAAAACA+GGG | + | 14711:6055-6074 | MS.gene74182:intergenic | 30.0% | |
| CATCTTCTATTGAGATTGTT+AGG | + | 14711:8188-8207 | MS.gene74182:intergenic | 30.0% | |
| CTCCAAATTCGAATCTAATA+GGG | - | 14711:8061-8080 | MS.gene74182:intron | 30.0% | |
| GAAACCCTGTAACTTTAATA+GGG | + | 14711:7360-7379 | MS.gene74182:intergenic | 30.0% | |
| GAAATAGAGAAGGACAAAAT+GGG | - | 14711:7591-7610 | MS.gene74182:intron | 30.0% | |
| GAAGGATTAGAATAAAAACG+AGG | + | 14711:6727-6746 | MS.gene74182:intergenic | 30.0% | |
| GGTACCATATATTGAAATCA+TGG | - | 14711:7928-7947 | MS.gene74182:intron | 30.0% | |
| GTCTATTTCATCTATTTGAC+CGG | - | 14711:6653-6672 | MS.gene74182:intron | 30.0% | |
| TACCCCATGATTTCAATATA+TGG | + | 14711:7935-7954 | MS.gene74182:intergenic | 30.0% | |
| TAGCTCAAATATCAAGTTAC+TGG | - | 14711:6331-6350 | MS.gene74182:intron | 30.0% | |
| TATTGAGATTGTTAGGAGAA+AGG | + | 14711:8181-8200 | MS.gene74182:intergenic | 30.0% | |
| TCGTCTAATCATGTATTACA+AGG | + | 14711:7213-7232 | MS.gene74182:intergenic | 30.0% | |
| TCTATTATAAGAATGCTGAG+TGG | - | 14711:7675-7694 | MS.gene74182:intron | 30.0% | |
| TGAAACCCTGTAACTTTAAT+AGG | + | 14711:7361-7380 | MS.gene74182:intergenic | 30.0% | |
| TGTGTTAAGAGAAATAGAGA+AGG | - | 14711:7581-7600 | MS.gene74182:intron | 30.0% | |
| TGTTTATTGCAAGAACGTTA+AGG | + | 14711:8753-8772 | MS.gene74182:intergenic | 30.0% | |
| TTAGCCCTATTAAAGTTACA+GGG | - | 14711:7353-7372 | MS.gene74182:intron | 30.0% | |
| TTCCCTATTAGATTCGAATT+TGG | + | 14711:8066-8085 | MS.gene74182:intergenic | 30.0% | |
| TTCCTAAGCTATTAATCTCT+AGG | - | 14711:8225-8244 | MS.gene74182:intron | 30.0% | |
| TTTAGCCCTATTAAAGTTAC+AGG | - | 14711:7352-7371 | MS.gene74182:intron | 30.0% | |
| TTTGCAGATTCTATATTCCT+GGG | - | 14711:6297-6316 | MS.gene74182:CDS | 30.0% | |
| ! | TACCATGTTTTGTAATGCTT+TGG | + | 14711:7872-7891 | MS.gene74182:intergenic | 30.0% |
| ! | TAGTGCTGCTAGTATAATTT+CGG | - | 14711:6810-6829 | MS.gene74182:intron | 30.0% |
| ! | TGAAGAATCTAGAACTATCT+CGG | + | 14711:8290-8309 | MS.gene74182:intergenic | 30.0% |
| ! | TGAATCTATAATTGTTGGCT+TGG | + | 14711:6908-6927 | MS.gene74182:intergenic | 30.0% |
| ! | TTGTTTCTTAAGAACTTCAG+AGG | - | 14711:6416-6435 | MS.gene74182:intron | 30.0% |
| !!! | ACTGCTTTGTTTGCTTTTTT+TGG | - | 14711:6204-6223 | MS.gene74182:CDS | 30.0% |
| AAAACATGGTAGCATAGTGA+TGG | - | 14711:7881-7900 | MS.gene74182:intron | 35.0% | |
| AAACATGGTAGCATAGTGAT+GGG | - | 14711:7882-7901 | MS.gene74182:intron | 35.0% | |
| AACTGTACGAATGAAGTCTA+AGG | + | 14711:7265-7284 | MS.gene74182:intergenic | 35.0% | |
| AAGTAGCTAGGCATATAATG+GGG | - | 14711:7552-7571 | MS.gene74182:intron | 35.0% | |
| AATGTCTTGTAGTACGTTGA+TGG | + | 14711:8148-8167 | MS.gene74182:intergenic | 35.0% | |
| ACAAAATGGGAATATCCACA+TGG | - | 14711:7604-7623 | MS.gene74182:intron | 35.0% | |
| ACTTGATATTTGAGCTAGAC+AGG | + | 14711:6328-6347 | MS.gene74182:intergenic | 35.0% | |
| AGAAACAGTTTATTGTCTGG+AGG | - | 14711:8412-8431 | MS.gene74182:intron | 35.0% | |
| AGAAGTAGCTAGGCATATAA+TGG | - | 14711:7550-7569 | MS.gene74182:intron | 35.0% | |
| AGAATAGTATCATGCAGAGA+AGG | + | 14711:6745-6764 | MS.gene74182:intergenic | 35.0% | |
| AGATGTCTAATCAAGCAAGA+TGG | - | 14711:8772-8791 | MS.gene74182:intron | 35.0% | |
| AGCAACACAATGGTCAAAAA+AGG | - | 14711:7820-7839 | MS.gene74182:intron | 35.0% | |
| ATTCTATACTGCCCAAAAAC+TGG | - | 14711:6097-6116 | MS.gene74182:intron | 35.0% | |
| ATTGAATGCTGCATCAGTTA+GGG | - | 14711:7179-7198 | MS.gene74182:intron | 35.0% | |
| CAGGAATATAGAATCTGCAA+AGG | + | 14711:6298-6317 | MS.gene74182:intergenic | 35.0% | |
| CCAATAGTTGCAATGCAAAT+GGG | - | 14711:6551-6570 | MS.gene74182:intron | 35.0% | |
| CTTTGCAGATTCTATATTCC+TGG | - | 14711:6296-6315 | MS.gene74182:CDS | 35.0% | |
| GAAAACAAATTGATATGGCC+TGG | - | 14711:7493-7512 | MS.gene74182:intron | 35.0% | |
| GAAGTAGCTAGGCATATAAT+GGG | - | 14711:7551-7570 | MS.gene74182:intron | 35.0% | |
| GAATCAAGCACTAGTTAAAG+AGG | - | 14711:7146-7165 | MS.gene74182:intron | 35.0% | |
| TCCAATAGTTGCAATGCAAA+TGG | - | 14711:6550-6569 | MS.gene74182:intron | 35.0% | |
| TTTAGTCACTGGACAAAAGA+AGG | + | 14711:6145-6164 | MS.gene74182:intergenic | 35.0% | |
| TTTCTGTTTAACATCGCCAT+TGG | + | 14711:8397-8416 | MS.gene74182:intergenic | 35.0% | |
| ! | CATGGGGTATTTGATAAAGA+GGG | - | 14711:7946-7965 | MS.gene74182:intron | 35.0% |
| ! | GTCCAAAGCATTACAAAACA+TGG | - | 14711:7867-7886 | MS.gene74182:intron | 35.0% |
| ! | GTGTCCTTTCTTATTTCACA+AGG | - | 14711:6231-6250 | MS.gene74182:CDS | 35.0% |
| ! | TAAACTTGCTCCAAAGAAGT+GGG | - | 14711:6161-6180 | MS.gene74182:intron | 35.0% |
| ! | TCAATGGTTTAGGTACTGTA+TGG | - | 14711:8528-8547 | MS.gene74182:CDS | 35.0% |
| ! | TCATGGGGTATTTGATAAAG+AGG | - | 14711:7945-7964 | MS.gene74182:intron | 35.0% |
| !! | TACTGTATGGTACTTTTTGC+TGG | - | 14711:8541-8560 | MS.gene74182:CDS | 35.0% |
| !!! | GCTTTGTTTGCTTTTTTTGG+TGG | - | 14711:6207-6226 | MS.gene74182:CDS | 35.0% |
| !!! | GTAGTACGTTGATGGTATTT+TGG | + | 14711:8140-8159 | MS.gene74182:intergenic | 35.0% |
| ACATAGGTAGTTGGTCAAGA+AGG | + | 14711:8373-8392 | MS.gene74182:intergenic | 40.0% | |
| ACCAACTACCTATGTTCCAA+TGG | - | 14711:8378-8397 | MS.gene74182:intron | 40.0% | |
| ACCTAATATCACTGCAAGGT+TGG | + | 14711:6271-6290 | MS.gene74182:intergenic | 40.0% | |
| AGTAGCTAGGCATATAATGG+GGG | - | 14711:7553-7572 | MS.gene74182:intron | 40.0% | |
| AGTTACAGGGTTTCAGATAG+AGG | - | 14711:7366-7385 | MS.gene74182:intron | 40.0% | |
| ATGCTTGGAAAGCAACACAA+TGG | - | 14711:7810-7829 | MS.gene74182:CDS | 40.0% | |
| CAAAAGCTGAACCATCTAGT+CGG | + | 14711:7085-7104 | MS.gene74182:intergenic | 40.0% | |
| CACTTAGCAAAGAAGTAGCT+AGG | - | 14711:7540-7559 | MS.gene74182:intron | 40.0% | |
| CCCATTTGCATTGCAACTAT+TGG | + | 14711:6554-6573 | MS.gene74182:intergenic | 40.0% | |
| CCTAATATCACTGCAAGGTT+GGG | + | 14711:6270-6289 | MS.gene74182:intergenic | 40.0% | |
| CTAGACCTAATATCACTGCA+AGG | + | 14711:6275-6294 | MS.gene74182:intergenic | 40.0% | |
| CTTATTTATGGTGAGGCAGA+GGG | - | 14711:8580-8599 | MS.gene74182:CDS | 40.0% | |
| GAAGCAGGACATCTCTTAAT+AGG | - | 14711:6384-6403 | MS.gene74182:intron | 40.0% | |
| GAGAGCAAAAACTTGATGCT+TGG | - | 14711:7795-7814 | MS.gene74182:CDS | 40.0% | |
| GATTGAATGCTGCATCAGTT+AGG | - | 14711:7178-7197 | MS.gene74182:intron | 40.0% | |
| GTCTAATCAAGCAAGATGGT+CGG | - | 14711:8776-8795 | MS.gene74182:intron | 40.0% | |
| GTGTGGCAGCATATAATGAT+GGG | + | 14711:6460-6479 | MS.gene74182:intergenic | 40.0% | |
| TAACATCGCCATTGGAACAT+AGG | + | 14711:8389-8408 | MS.gene74182:intergenic | 40.0% | |
| TGTGGCAGCATATAATGATG+GGG | + | 14711:6459-6478 | MS.gene74182:intergenic | 40.0% | |
| TTATTAGGAGGGACCATGTA+AGG | + | 14711:6482-6501 | MS.gene74182:intergenic | 40.0% | |
| TTTCACAAGGAATAGACCTC+AGG | - | 14711:6244-6263 | MS.gene74182:CDS | 40.0% | |
| ! | AAACTTGCTCCAAAGAAGTG+GGG | - | 14711:6162-6181 | MS.gene74182:intron | 40.0% |
| ! | AGCACTAGTTAAAGAGGTAC+AGG | - | 14711:7152-7171 | MS.gene74182:intron | 40.0% |
| ! | CATCAAGTTTTTGCTCTCGT+AGG | + | 14711:7793-7812 | MS.gene74182:intergenic | 40.0% |
| ! | CTAAACTTGCTCCAAAGAAG+TGG | - | 14711:6160-6179 | MS.gene74182:intron | 40.0% |
| ! | GTTTGTTAAGGGAAGAGCAT+TGG | - | 14711:7728-7747 | MS.gene74182:intron | 40.0% |
| ! | TAGATGGTTCAGCTTTTGAC+AGG | - | 14711:7087-7106 | MS.gene74182:intron | 40.0% |
| ! | TCTTATTTATGGTGAGGCAG+AGG | - | 14711:8579-8598 | MS.gene74182:CDS | 40.0% |
| ! | TGAGGCTCTTATTTATGGTG+AGG | - | 14711:8573-8592 | MS.gene74182:CDS | 40.0% |
| ! | TTTGGAGCAAGTTTAGTCAC+TGG | + | 14711:6156-6175 | MS.gene74182:intergenic | 40.0% |
| !! | ACATCTGGTGTTACATTCCT+CGG | + | 14711:5952-5971 | MS.gene74182:intergenic | 40.0% |
| !! | GATGAGAAAGTTGGTTCGAA+AGG | - | 14711:7516-7535 | MS.gene74182:intron | 40.0% |
| !! | GCTGTTAAAGCATTGGAAAG+TGG | - | 14711:8849-8868 | MS.gene74182:intron | 40.0% |
| !! | GTTAAAGCATTGGAAAGTGG+TGG | - | 14711:8852-8871 | MS.gene74182:intron | 40.0% |
| AAAAAAGGGCAAGCGTGAAG+GGG | + | 14711:8452-8471 | None:intergenic | 45.0% | |
| AAGACCTCTGCTACAGACAA+TGG | + | 14711:8658-8677 | MS.gene74182:intergenic | 45.0% | |
| AATGCTGAGTGGTGAGAGAA+GGG | - | 14711:7686-7705 | MS.gene74182:intron | 45.0% | |
| ACGGGGAAATGAGTTGTGTA+AGG | - | 14711:7647-7666 | MS.gene74182:intron | 45.0% | |
| ATATGCTGCCACACCTTACA+TGG | - | 14711:6466-6485 | MS.gene74182:intron | 45.0% | |
| ATGAGGATTCGACGCCTATA+TGG | + | 14711:6360-6379 | MS.gene74182:intergenic | 45.0% | |
| CAAGTTACTGGCCACCATAT+AGG | - | 14711:6343-6362 | MS.gene74182:intron | 45.0% | |
| CCAATGCTTTAACAGCAGCT+CGG | + | 14711:8845-8864 | MS.gene74182:intergenic | 45.0% | |
| CCCAACCTTGCAGTGATATT+AGG | - | 14711:6267-6286 | MS.gene74182:CDS | 45.0% | |
| CGAATCCTCATTCATGAAGC+AGG | - | 14711:6369-6388 | MS.gene74182:intron | 45.0% | |
| CGGGGAAATGAGTTGTGTAA+GGG | - | 14711:7648-7667 | MS.gene74182:intron | 45.0% | |
| CTAGAATCACCCCTCGAATT+GGG | + | 14711:6529-6548 | MS.gene74182:intergenic | 45.0% | |
| GAAAAAAGGGCAAGCGTGAA+GGG | + | 14711:8453-8472 | MS.gene74182:intergenic | 45.0% | |
| GATGTCCTGCTTCATGAATG+AGG | + | 14711:6377-6396 | MS.gene74182:intergenic | 45.0% | |
| GCAATGCAAATGGGTATCCA+AGG | - | 14711:6560-6579 | MS.gene74182:intron | 45.0% | |
| GCAGATTCTATATTCCTGGG+AGG | - | 14711:6300-6319 | MS.gene74182:CDS | 45.0% | |
| GCCATTGGAACATAGGTAGT+TGG | + | 14711:8382-8401 | MS.gene74182:intergenic | 45.0% | |
| GGTGTGGCAGCATATAATGA+TGG | + | 14711:6461-6480 | MS.gene74182:intergenic | 45.0% | |
| TAAACCAGAGCAACCAGTTG+TGG | + | 14711:8682-8701 | MS.gene74182:intergenic | 45.0% | |
| TAATGGGATGCCCAATTCGA+GGG | - | 14711:6516-6535 | MS.gene74182:intron | 45.0% | |
| TGAAAAAAGGGCAAGCGTGA+AGG | + | 14711:8454-8473 | MS.gene74182:intergenic | 45.0% | |
| TGAGAGTGAGAGGAGAGAAA+CGG | - | 14711:7628-7647 | MS.gene74182:intron | 45.0% | |
| TTGGCGAATAGATGCCATGA+AGG | - | 14711:7747-7766 | MS.gene74182:intron | 45.0% | |
| TTTGCTCTCGTAGGCATGTA+AGG | + | 14711:7784-7803 | MS.gene74182:intergenic | 45.0% | |
| ! | GCAGCTGAGGCTCTTATTTA+TGG | - | 14711:8568-8587 | MS.gene74182:CDS | 45.0% |
| ! | GTAGCTAGGCATATAATGGG+GGG | - | 14711:7554-7573 | MS.gene74182:intron | 45.0% |
| ! | TCTAGAATCACCCCTCGAAT+TGG | + | 14711:6530-6549 | MS.gene74182:intergenic | 45.0% |
| ! | TTAGGCAGGGACTCAGTTTT+GGG | - | 14711:7028-7047 | MS.gene74182:intron | 45.0% |
| ! | TTTAGGCAGGGACTCAGTTT+TGG | - | 14711:7027-7046 | MS.gene74182:intron | 45.0% |
| AAAAAGGGCAAGCGTGAAGG+GGG | + | 14711:8451-8470 | None:intergenic | 50.0% | |
| AATGGGATGCCCAATTCGAG+GGG | - | 14711:6517-6536 | MS.gene74182:intron | 50.0% | |
| ACCTCTGCTACAGACAATGG+AGG | + | 14711:8655-8674 | MS.gene74182:intergenic | 50.0% | |
| AGAGTGAGAGGAGAGAAACG+GGG | - | 14711:7630-7649 | MS.gene74182:intron | 50.0% | |
| AGCAGAGGTCTTTCCACAAC+TGG | - | 14711:8666-8685 | MS.gene74182:CDS | 50.0% | |
| AGGATTCGACGCCTATATGG+TGG | + | 14711:6357-6376 | MS.gene74182:intergenic | 50.0% | |
| ATGGCCTGGGATGAGAAAGT+TGG | - | 14711:7507-7526 | MS.gene74182:intron | 50.0% | |
| ATTTATGGTGAGGCAGAGGG+TGG | - | 14711:8583-8602 | MS.gene74182:CDS | 50.0% | |
| CCGAGCTGCTGTTAAAGCAT+TGG | - | 14711:8842-8861 | MS.gene74182:intron | 50.0% | |
| CGAACCAACTTTCTCATCCC+AGG | + | 14711:7514-7533 | MS.gene74182:intergenic | 50.0% | |
| CTAATGGGATGCCCAATTCG+AGG | - | 14711:6515-6534 | MS.gene74182:intron | 50.0% | |
| CTCGAATTGGGCATCCCATT+AGG | + | 14711:6517-6536 | MS.gene74182:intergenic | 50.0% | |
| CTTTCCACAACTGGTTGCTC+TGG | - | 14711:8675-8694 | MS.gene74182:CDS | 50.0% | |
| GAATGCTGAGTGGTGAGAGA+AGG | - | 14711:7685-7704 | MS.gene74182:intron | 50.0% | |
| GAATGCTGCATCAGTTAGGG+TGG | - | 14711:7182-7201 | MS.gene74182:intron | 50.0% | |
| GAGAGTGAGAGGAGAGAAAC+GGG | - | 14711:7629-7648 | MS.gene74182:intron | 50.0% | |
| GCAAATGGGTATCCAAGGAC+AGG | - | 14711:6565-6584 | MS.gene74182:intron | 50.0% | |
| GCAGTCTGAGTGCGGTAATT+AGG | - | 14711:8874-8893 | MS.gene74182:CDS | 50.0% | |
| GCGAATAGATGCCATGAAGG+TGG | - | 14711:7750-7769 | MS.gene74182:intron | 50.0% | |
| GTCTGAGTGCGGTAATTAGG+AGG | - | 14711:8877-8896 | MS.gene74182:CDS | 50.0% | |
| TCCAAAGAAGTGGGGTCTCT+CGG | - | 14711:6170-6189 | MS.gene74182:intron | 50.0% | |
| TGCACCTTCCAAACCAGTTG+CGG | + | 14711:5983-6002 | MS.gene74182:intergenic | 50.0% | |
| TGCGGTAATTAGGAGGATCG+AGG | - | 14711:8884-8903 | MS.gene74182:CDS | 50.0% | |
| ! | CATAGTGATGGGACATGCCT+TGG | - | 14711:7893-7912 | MS.gene74182:intron | 50.0% |
| ! | TTTTGCTGGCATTGCAGCTG+AGG | - | 14711:8555-8574 | MS.gene74182:CDS | 50.0% |
| AAAAGGGCAAGCGTGAAGGG+GGG | + | 14711:8450-8469 | MS.gene74182:intergenic | 55.0% | |
| AAGAAGTGGGGTCTCTCGGA+TGG | - | 14711:6174-6193 | MS.gene74182:intron | 55.0% | |
| AAGTGGTGGCAGTCTGAGTG+CGG | - | 14711:8866-8885 | MS.gene74182:intron | 55.0% | |
| AGGAGGGACCATGTAAGGTG+TGG | + | 14711:6477-6496 | MS.gene74182:intergenic | 55.0% | |
| AGGTCCACACACCACCTTCA+TGG | + | 14711:7764-7783 | MS.gene74182:intergenic | 55.0% | |
| ATGGGACATGCCTTGGAGGA+TGG | - | 14711:7900-7919 | MS.gene74182:intron | 55.0% | |
| CATCTAGTCGGCCTTCAGCA+AGG | + | 14711:7073-7092 | MS.gene74182:intergenic | 55.0% | |
| CTTGAGCTCCGCAACTGGTT+TGG | - | 14711:5972-5991 | MS.gene74182:CDS | 55.0% | |
| CTTGCTGAAGGCCGACTAGA+TGG | - | 14711:7071-7090 | MS.gene74182:intron | 55.0% | |
| GATGCCATGAAGGTGGTGTG+TGG | - | 14711:7757-7776 | MS.gene74182:intron | 55.0% | |
| GATGTCTTGAGCTCCGCAAC+TGG | - | 14711:5967-5986 | MS.gene74182:CDS | 55.0% | |
| GCCTCCATTGTCTGTAGCAG+AGG | - | 14711:8651-8670 | MS.gene74182:CDS | 55.0% | |
| GTTGCGGAGCTCAAGACATC+TGG | + | 14711:5967-5986 | MS.gene74182:intergenic | 55.0% | |
| TCCACATGGCTGAGAGTGAG+AGG | - | 14711:7618-7637 | MS.gene74182:intron | 55.0% | |
| TCCGAGAGACCCCACTTCTT+TGG | + | 14711:6174-6193 | MS.gene74182:intergenic | 55.0% | |
| TCCTCTCACTCTCAGCCATG+TGG | + | 14711:7622-7641 | MS.gene74182:intergenic | 55.0% | |
| TGGGACATGCCTTGGAGGAT+GGG | - | 14711:7901-7920 | MS.gene74182:intron | 55.0% | |
| ! | AGTGATGGGACATGCCTTGG+AGG | - | 14711:7896-7915 | MS.gene74182:intron | 55.0% |
| !! | AGCTCCGCAACTGGTTTGGA+AGG | - | 14711:5976-5995 | MS.gene74182:CDS | 55.0% |
| ATGCCTTGGAGGATGGGCAC+TGG | - | 14711:7907-7926 | MS.gene74182:intron | 60.0% | |
| GAGCTAGACAGGTACCTCCC+AGG | + | 14711:6317-6336 | MS.gene74182:intergenic | 60.0% | |
| GTACCAGTGCCCATCCTCCA+AGG | + | 14711:7913-7932 | MS.gene74182:intergenic | 60.0% | |
| GTTGCCAGCGACCTTGCTGA+AGG | - | 14711:7059-7078 | MS.gene74182:intron | 60.0% | |
| TCACTGCAAGGTTGGGCCTG+AGG | + | 14711:6263-6282 | MS.gene74182:intergenic | 60.0% | |
| TCGGCCTTCAGCAAGGTCGC+TGG | + | 14711:7066-7085 | MS.gene74182:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 14711 | gene | 5938 | 8929 | 5938 | ID=MS.gene74182 |
| 14711 | mRNA | 5938 | 8929 | 5938 | ID=MS.gene74182.t1;Parent=MS.gene74182 |
| 14711 | exon | 8870 | 8929 | 8870 | ID=MS.gene74182.t1.exon1;Parent=MS.gene74182.t1 |
| 14711 | CDS | 8870 | 8929 | 8870 | ID=cds.MS.gene74182.t1;Parent=MS.gene74182.t1 |
| 14711 | exon | 8462 | 8710 | 8462 | ID=MS.gene74182.t1.exon2;Parent=MS.gene74182.t1 |
| 14711 | CDS | 8462 | 8710 | 8462 | ID=cds.MS.gene74182.t1;Parent=MS.gene74182.t1 |
| 14711 | exon | 8281 | 8357 | 8281 | ID=MS.gene74182.t1.exon3;Parent=MS.gene74182.t1 |
| 14711 | CDS | 8281 | 8357 | 8281 | ID=cds.MS.gene74182.t1;Parent=MS.gene74182.t1 |
| 14711 | exon | 7759 | 7835 | 7759 | ID=MS.gene74182.t1.exon4;Parent=MS.gene74182.t1 |
| 14711 | CDS | 7759 | 7835 | 7759 | ID=cds.MS.gene74182.t1;Parent=MS.gene74182.t1 |
| 14711 | exon | 6195 | 6327 | 6195 | ID=MS.gene74182.t1.exon5;Parent=MS.gene74182.t1 |
| 14711 | CDS | 6195 | 6327 | 6195 | ID=cds.MS.gene74182.t1;Parent=MS.gene74182.t1 |
| 14711 | exon | 5938 | 6093 | 5938 | ID=MS.gene74182.t1.exon6;Parent=MS.gene74182.t1 |
| 14711 | CDS | 5938 | 6093 | 5938 | ID=cds.MS.gene74182.t1;Parent=MS.gene74182.t1 |
| Gene Sequence |
| Protein sequence |
