Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74211.t1 | XP_003592786.2 | 97.9 | 438 | 9 | 0 | 1 | 438 | 1 | 438 | 2.30E-247 | 864.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74211.t1 | Q9SR06 | 70.0 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 3.2e-181 | 636.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74211.t1 | G7IF21 | 97.9 | 438 | 9 | 0 | 1 | 438 | 1 | 438 | 1.7e-247 | 864.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42910 | MS.gene74211 | PPI |
| MS.gene73008 | MS.gene74211 | PPI |
| MS.gene81197 | MS.gene74211 | PPI |
| MS.gene042025 | MS.gene74211 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74211.t1 | MTR_1g116060 | 97.945 | 438 | 9 | 0 | 1 | 438 | 1 | 438 | 0.0 | 881 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74211.t1 | AT3G04680 | 69.977 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 0.0 | 649 |
| MS.gene74211.t1 | AT3G04680 | 69.977 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 0.0 | 649 |
| MS.gene74211.t1 | AT3G04680 | 69.977 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 0.0 | 649 |
| MS.gene74211.t1 | AT5G39930 | 53.444 | 421 | 191 | 3 | 17 | 435 | 4 | 421 | 3.97e-157 | 451 |
| MS.gene74211.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.18e-12 | 68.9 |
| MS.gene74211.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.51e-12 | 69.3 |
| MS.gene74211.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.51e-12 | 69.3 |
| MS.gene74211.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.51e-12 | 69.3 |
Find 129 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAGCAAGTATTTAATTA+TGG | 0.144919 | 1.2:-86145315 | MS.gene74211:CDS |
| CTTCGTCTTCGACTCCTTAA+TGG | 0.169227 | 1.2:-86148906 | MS.gene74211:CDS |
| TACCCTTATCCTATTACTTC+TGG | 0.205288 | 1.2:+86147149 | None:intergenic |
| GACAATTAAGCAAGTGAAAT+TGG | 0.240765 | 1.2:-86148970 | MS.gene74211:CDS |
| GTTGTTGGACCTTCAGATTC+TGG | 0.241641 | 1.2:-86148132 | MS.gene74211:CDS |
| TCCTATTACTTCTGGACTTC+TGG | 0.246775 | 1.2:+86147157 | None:intergenic |
| GGAAAATTGAGCCAGATTTC+AGG | 0.267757 | 1.2:+86148852 | None:intergenic |
| ACCTTTGTTGACTTGGATAT+TGG | 0.269551 | 1.2:-86148051 | MS.gene74211:CDS |
| GGTGCAGGTCCCGCTGTTAC+TGG | 0.269582 | 1.2:-86149008 | MS.gene74211:CDS |
| AAATCTCAGCGTTTCCATTA+AGG | 0.272061 | 1.2:+86148892 | None:intergenic |
| CCACGCTCTGCCTTGCCAAT+TGG | 0.286604 | 1.2:-86146360 | MS.gene74211:CDS |
| CCAAGCAAGTATTTAATTAT+GGG | 0.286724 | 1.2:-86145314 | MS.gene74211:CDS |
| ATTCAAGGCTGATGTTGTTT+TGG | 0.292392 | 1.2:-86147451 | MS.gene74211:CDS |
| TCCGCGGTATAACCAGTTTC+AGG | 0.300467 | 1.2:+86148681 | None:intergenic |
| GTCAAGGATGCTTCTTAGTT+GGG | 0.351155 | 1.2:-86148097 | MS.gene74211:CDS |
| TTATGGTGCAGCAATGTTGC+CGG | 0.356449 | 1.2:-86145493 | MS.gene74211:intron |
| GGCCCTAGGGTGATTGTTGT+TGG | 0.362138 | 1.2:-86148147 | MS.gene74211:CDS |
| GGATCGATGGGCATTTCAAT+TGG | 0.380336 | 1.2:+86147988 | None:intergenic |
| TGTCAAGGATGCTTCTTAGT+TGG | 0.381883 | 1.2:-86148098 | MS.gene74211:CDS |
| CCGAGCTTCCACCTGAAATC+TGG | 0.383905 | 1.2:-86148863 | MS.gene74211:CDS |
| AGTTACGGCGAACTTGAGTC+TGG | 0.395870 | 1.2:+86148827 | None:intergenic |
| AATTTCACTTGCTTAATTGT+CGG | 0.397547 | 1.2:+86148972 | None:intergenic |
| TTTGCTCAGAGACGTGCTTA+AGG | 0.408263 | 1.2:-86147250 | MS.gene74211:CDS |
| AGTCCAGAAGTAATAGGATA+AGG | 0.412890 | 1.2:-86147152 | MS.gene74211:CDS |
| CAAGGGTCTATAACAATTCC+TGG | 0.414153 | 1.2:-86148027 | MS.gene74211:CDS |
| TCAAGTTTCAAGCCATGTTA+AGG | 0.417129 | 1.2:+86145289 | None:intergenic |
| TACCTTGAAATGATCTCATC+AGG | 0.434012 | 1.2:+86146243 | None:intergenic |
| TTGCTCAGAGACGTGCTTAA+GGG | 0.434050 | 1.2:-86147249 | MS.gene74211:CDS |
| ATTTGATTGGTCAGGGCCCT+AGG | 0.434217 | 1.2:-86148161 | MS.gene74211:intron |
| TAACACCATTCCAGCAGCTC+TGG | 0.437054 | 1.2:+86147679 | None:intergenic |
| GCCAGAAGTCCAGAAGTAAT+AGG | 0.441249 | 1.2:-86147158 | MS.gene74211:CDS |
| GTCCAGAAGTAATAGGATAA+GGG | 0.451342 | 1.2:-86147151 | MS.gene74211:intron |
| CCCATAATTAAATACTTGCT+TGG | 0.452098 | 1.2:+86145314 | None:intergenic |
| AATGATCTCATCAGGTTCCT+TGG | 0.459020 | 1.2:+86146251 | None:intergenic |
| AGTTTCACAACATCTACTTT+AGG | 0.461880 | 1.2:+86147222 | None:intergenic |
| GCATGCAATCCGTACATTCA+AGG | 0.462451 | 1.2:-86147466 | MS.gene74211:CDS |
| GACTTCTGGCGGAACTTCAC+AGG | 0.465905 | 1.2:+86147171 | None:intergenic |
| GCAGCAGGTTCTGCTCCAAT+TGG | 0.466934 | 1.2:+86146345 | None:intergenic |
| AATGCCGAGTCCAGAGCTGC+TGG | 0.468900 | 1.2:-86147689 | MS.gene74211:CDS |
| CAACATCAGCCTTGAATGTA+CGG | 0.471086 | 1.2:+86147457 | None:intergenic |
| GTATGGTGCTACCATTGAAA+TGG | 0.476019 | 1.2:-86148712 | MS.gene74211:CDS |
| AATACCATGGGATGGATAGA+AGG | 0.476207 | 1.2:-86147656 | MS.gene74211:CDS |
| GAAGCCCACCTTTGTTGACT+TGG | 0.477215 | 1.2:-86148058 | MS.gene74211:CDS |
| ATGGATGGTACTCCTGAAAC+TGG | 0.480202 | 1.2:-86148693 | MS.gene74211:CDS |
| AGGAGTACCATCCATTTCAA+TGG | 0.480948 | 1.2:+86148701 | None:intergenic |
| GTTGACTTGGATATTGGCCA+AGG | 0.482675 | 1.2:-86148045 | MS.gene74211:CDS |
| GGTCGGGTGGAGTTGTATCT+AGG | 0.483284 | 1.2:-86147194 | MS.gene74211:CDS |
| CAGGAATTGTTATAGACCCT+TGG | 0.485244 | 1.2:+86148028 | None:intergenic |
| ATACTAGAGAGACAATTTGC+TGG | 0.487030 | 1.2:-86147713 | MS.gene74211:CDS |
| TTTGTTTATCGAGTTGGTGG+TGG | 0.488527 | 1.2:-86146393 | MS.gene74211:CDS |
| AGATGACTCTGTATTATCTC+AGG | 0.490721 | 1.2:-86148481 | MS.gene74211:intron |
| GAGGAGAAAGATCATTTGTA+AGG | 0.495205 | 1.2:+86146445 | None:intergenic |
| ACATACCTTACACCATCTGC+TGG | 0.496857 | 1.2:-86145344 | MS.gene74211:CDS |
| TTAATGGCGTATGGCGGTGC+AGG | 0.497042 | 1.2:-86149023 | MS.gene74211:CDS |
| CTTGGAAGTTCTCCAGCAGA+TGG | 0.504121 | 1.2:+86145332 | None:intergenic |
| AATTGAAATGCCCATCGATC+CGG | 0.504848 | 1.2:-86147986 | MS.gene74211:CDS |
| GTTCTCCAGCAGATGGTGTA+AGG | 0.505096 | 1.2:+86145339 | None:intergenic |
| GACTTGTTTGTTTATCGAGT+TGG | 0.507232 | 1.2:-86146399 | MS.gene74211:CDS |
| TAACAGACATTGACATTCAG+AGG | 0.512887 | 1.2:-86145459 | MS.gene74211:intron |
| GTTGGGCAGCAAAACAAGGT+TGG | 0.516790 | 1.2:-86148080 | MS.gene74211:CDS |
| AAGGCAGAGCGTGGAGCTTG+TGG | 0.519634 | 1.2:+86146369 | None:intergenic |
| CCCTAGTCTTTAATGGCGTA+TGG | 0.520280 | 1.2:-86149032 | None:intergenic |
| AATTCCCTCCACCGGATCGA+TGG | 0.521049 | 1.2:+86147975 | None:intergenic |
| CTTAGTTGGGCAGCAAAACA+AGG | 0.522514 | 1.2:-86148084 | MS.gene74211:CDS |
| GTTGTGAAACTTCAGAGGTC+GGG | 0.523003 | 1.2:-86147210 | MS.gene74211:CDS |
| AAATTTGAAATATTAGAATG+AGG | 0.541936 | 1.2:+86146426 | None:intergenic |
| AACTGGTTATACCGCGGATG+AGG | 0.542046 | 1.2:-86148676 | MS.gene74211:intron |
| TCAAGAGGAATTCCCTCCAC+CGG | 0.542450 | 1.2:+86147967 | None:intergenic |
| TTGTTTGTTTATCGAGTTGG+TGG | 0.550368 | 1.2:-86146396 | MS.gene74211:CDS |
| ACATTTACATAACTAACCAT+TGG | 0.551977 | 1.2:+86148552 | None:intergenic |
| ATTCCCTCCACCGGATCGAT+GGG | 0.554654 | 1.2:+86147976 | None:intergenic |
| GTCTGTTACATAGATAAAGC+CGG | 0.555833 | 1.2:+86145474 | None:intergenic |
| TTGACTTGGATATTGGCCAA+GGG | 0.556103 | 1.2:-86148044 | MS.gene74211:CDS |
| CCAATTGGCAAGGCAGAGCG+TGG | 0.557049 | 1.2:+86146360 | None:intergenic |
| GTGCTTGTCAAGGAGCTCGC+GGG | 0.558666 | 1.2:-86147737 | MS.gene74211:CDS |
| ACTCTCGTTGGATCTGCAGC+AGG | 0.559383 | 1.2:+86146330 | None:intergenic |
| CGAGTCCAGAGCTGCTGGAA+TGG | 0.560247 | 1.2:-86147684 | MS.gene74211:CDS |
| AATGCCCATCGATCCGGTGG+AGG | 0.563074 | 1.2:-86147980 | MS.gene74211:CDS |
| CCTTGCTGTCTCATTTGCCA+AGG | 0.564042 | 1.2:-86146268 | MS.gene74211:CDS |
| TTCACAGCTACAACTCTCGT+TGG | 0.566936 | 1.2:+86146318 | None:intergenic |
| CACTCCTTCTATCCATCCCA+TGG | 0.569058 | 1.2:+86147652 | None:intergenic |
| GGAGTGGCAGCAATGCATCC+AGG | 0.569729 | 1.2:+86148009 | None:intergenic |
| TTTGATTGGTCAGGGCCCTA+GGG | 0.570927 | 1.2:-86148160 | MS.gene74211:intron |
| CCAGATTTCAGGTGGAAGCT+CGG | 0.573098 | 1.2:+86148863 | None:intergenic |
| TGTCCATAAAAGTAAACAAG+AGG | 0.573566 | 1.2:+86147940 | None:intergenic |
| TGTTGTGAAACTTCAGAGGT+CGG | 0.573910 | 1.2:-86147211 | MS.gene74211:CDS |
| AACCTGATGAGATCATTTCA+AGG | 0.575187 | 1.2:-86146245 | MS.gene74211:intron |
| TAATTATGGGAACCTTAACA+TGG | 0.575215 | 1.2:-86145301 | MS.gene74211:CDS |
| TTGTTTATCGAGTTGGTGGT+GGG | 0.575272 | 1.2:-86146392 | MS.gene74211:CDS |
| TCGAAGACGAAGAGGTGAGT+CGG | 0.575469 | 1.2:+86148917 | None:intergenic |
| GGTCCAACAACAATCACCCT+AGG | 0.575548 | 1.2:+86148144 | None:intergenic |
| ATGCCCATCGATCCGGTGGA+GGG | 0.575608 | 1.2:-86147979 | MS.gene74211:CDS |
| GCCAATATCCAAGTCAACAA+AGG | 0.588558 | 1.2:+86148050 | None:intergenic |
| TGGTGTTAAATACCATGGGA+TGG | 0.592447 | 1.2:-86147664 | MS.gene74211:CDS |
| AATATCCAAGTCAACAAAGG+TGG | 0.592672 | 1.2:+86148053 | None:intergenic |
| TGAAATGCCCATCGATCCGG+TGG | 0.592811 | 1.2:-86147983 | MS.gene74211:CDS |
| GAATTTGAACCAGTAACAGC+GGG | 0.608811 | 1.2:+86148999 | None:intergenic |
| CTGGAAAGACTACCTTGTCA+AGG | 0.612870 | 1.2:-86148113 | MS.gene74211:CDS |
| ATATCCAAGTCAACAAAGGT+GGG | 0.613831 | 1.2:+86148054 | None:intergenic |
| GTAGTCTTTCCAGAATCTGA+AGG | 0.614463 | 1.2:+86148123 | None:intergenic |
| AAATTGAGCCAGATTTCAGG+TGG | 0.615483 | 1.2:+86148855 | None:intergenic |
| ATTGTATAAAGTGCTTGTCA+AGG | 0.615803 | 1.2:-86147747 | MS.gene74211:CDS |
| GATAATACAGAGTCATCTGA+AGG | 0.618694 | 1.2:+86148486 | None:intergenic |
| GATGGGCATTTCAATTGGAG+TGG | 0.619367 | 1.2:+86147993 | None:intergenic |
| TAAACAAGAGGCATTTCAAG+AGG | 0.619620 | 1.2:+86147952 | None:intergenic |
| CATTCCAGCAGCTCTGGACT+CGG | 0.622880 | 1.2:+86147685 | None:intergenic |
| AGGTTCTGCTCCAATTGGCA+AGG | 0.623138 | 1.2:+86146350 | None:intergenic |
| GTTACGGCGAACTTGAGTCT+GGG | 0.624730 | 1.2:+86148828 | None:intergenic |
| TGCTTGTCAAGGAGCTCGCG+GGG | 0.630947 | 1.2:-86147736 | MS.gene74211:CDS |
| TATTACTTCTGGACTTCTGG+CGG | 0.638427 | 1.2:+86147160 | None:intergenic |
| GTGAAACTTCAGAGGTCGGG+TGG | 0.639286 | 1.2:-86147207 | MS.gene74211:CDS |
| CCTTGGCAAATGAGACAGCA+AGG | 0.641711 | 1.2:+86146268 | None:intergenic |
| ACTAAGAAGCATCCTTGACA+AGG | 0.644015 | 1.2:+86148101 | None:intergenic |
| TGGAATGGTGTTAAATACCA+TGG | 0.644511 | 1.2:-86147669 | MS.gene74211:CDS |
| CATGGGATGGATAGAAGGAG+TGG | 0.650431 | 1.2:-86147651 | MS.gene74211:CDS |
| TAGATGTTGTGAAACTTCAG+AGG | 0.652011 | 1.2:-86147215 | MS.gene74211:CDS |
| ATGAGACAGCAAGGACTGCG+TGG | 0.652105 | 1.2:+86146277 | None:intergenic |
| GGAATGGTGTTAAATACCAT+GGG | 0.654726 | 1.2:-86147668 | MS.gene74211:CDS |
| TTAAGGAGTCGAAGACGAAG+AGG | 0.656307 | 1.2:+86148909 | None:intergenic |
| GTCCAACAACAATCACCCTA+GGG | 0.657175 | 1.2:+86148145 | None:intergenic |
| GGTGCTACCATTGAAATGGA+TGG | 0.657214 | 1.2:-86148708 | MS.gene74211:CDS |
| AGTGCTTGTCAAGGAGCTCG+CGG | 0.657958 | 1.2:-86147738 | MS.gene74211:CDS |
| ATGGGATGGATAGAAGGAGT+GGG | 0.661981 | 1.2:-86147650 | MS.gene74211:CDS |
| TCCTGAAACTGGTTATACCG+CGG | 0.672527 | 1.2:-86148682 | MS.gene74211:CDS |
| CGAATTTGAACCAGTAACAG+CGG | 0.691935 | 1.2:+86148998 | None:intergenic |
| TAGTCTTTAATGGCGTATGG+CGG | 0.711686 | 1.2:-86149029 | None:intergenic |
| ACGGCGAACTTGAGTCTGGG+AGG | 0.717660 | 1.2:+86148831 | None:intergenic |
| TTTATGGACACACATCTCCG+AGG | 0.722635 | 1.2:-86147927 | MS.gene74211:intron |
| AAAGTGATTTACCTCATCCG+CGG | 0.723753 | 1.2:+86148665 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATTATTATTAA+GGG | - | chr1.2:86146013-86146032 | MS.gene74211:intron | 0.0% |
| !! | ACATAAAAATAATATAACTA+AGG | - | chr1.2:86148624-86148643 | MS.gene74211:intron | 10.0% |
| !!! | ATTTTTAAATGTTAGTTAAA+TGG | - | chr1.2:86147264-86147283 | MS.gene74211:CDS | 10.0% |
| !!! | TATTATAATTTTTGTAAACT+TGG | - | chr1.2:86146992-86147011 | MS.gene74211:intron | 10.0% |
| !!! | TTTTTAAATGTTAGTTAAAT+GGG | - | chr1.2:86147265-86147284 | MS.gene74211:CDS | 10.0% |
| !! | ACTGAAAAAAAAGAATTATT+TGG | + | chr1.2:86146531-86146550 | None:intergenic | 15.0% |
| !! | TAAATAGTTGAAAATATGAT+AGG | + | chr1.2:86146425-86146444 | None:intergenic | 15.0% |
| !! | TTAATTAGTTAAAAACAGTT+GGG | - | chr1.2:86148281-86148300 | MS.gene74211:intron | 15.0% |
| !!! | AAATTTGAAATATTAGAATG+AGG | + | chr1.2:86147886-86147905 | None:intergenic | 15.0% |
| !!! | TCATATTTTCAACTATTTAT+TGG | - | chr1.2:86146426-86146445 | MS.gene74211:CDS | 15.0% |
| !!! | TCTTATTTTTTTCATTTTAG+AGG | - | chr1.2:86147235-86147254 | MS.gene74211:CDS | 15.0% |
| !!! | TGTTTTTAACTAATTAACAT+AGG | + | chr1.2:86148278-86148297 | None:intergenic | 15.0% |
| !! | AAAACATAAAATTTGAGTGA+AGG | - | chr1.2:86147556-86147575 | MS.gene74211:intron | 20.0% |
| !! | AAAATAAATGAATCTTCCTT+GGG | - | chr1.2:86146957-86146976 | MS.gene74211:intron | 20.0% |
| !! | AAACATAAAATTTGAGTGAA+GGG | - | chr1.2:86147557-86147576 | MS.gene74211:intron | 20.0% |
| !! | AAATAGGTAGAATTAAGTAT+TGG | - | chr1.2:86147506-86147525 | MS.gene74211:intron | 20.0% |
| !! | AAGCAACAACAAATAATATA+GGG | + | chr1.2:86148181-86148200 | None:intergenic | 20.0% |
| !! | ACATAATTTATTTGTGTGTT+AGG | - | chr1.2:86145564-86145583 | MS.gene74211:intron | 20.0% |
| !! | ATTGAAAATTGGTATAAAAG+AGG | + | chr1.2:86145525-86145544 | None:intergenic | 20.0% |
| !! | GTTAATTAGTTAAAAACAGT+TGG | - | chr1.2:86148280-86148299 | MS.gene74211:intron | 20.0% |
| !! | TAAGTATCAAATGATTTGAT+TGG | - | chr1.2:86146135-86146154 | MS.gene74211:intron | 20.0% |
| !! | TAAGTTCAAAATAACCAAAA+TGG | + | chr1.2:86148462-86148481 | None:intergenic | 20.0% |
| !! | TTCAATTCAACAATAATGTA+AGG | + | chr1.2:86146708-86146727 | None:intergenic | 20.0% |
| !!! | AAAAATCAAGGTATTAGTTA+TGG | + | chr1.2:86146932-86146951 | None:intergenic | 20.0% |
| !!! | AAAATCAAGGTATTAGTTAT+GGG | + | chr1.2:86146931-86146950 | None:intergenic | 20.0% |
| !!! | AGATTTTGTTATGTTGTTTA+TGG | - | chr1.2:86148881-86148900 | MS.gene74211:CDS | 20.0% |
| !!! | ATAGTTCTTTTGAAAATAGT+AGG | - | chr1.2:86147582-86147601 | MS.gene74211:intron | 20.0% |
| !!! | ATGATTTTTATGTGAGAAAT+AGG | - | chr1.2:86147490-86147509 | MS.gene74211:intron | 20.0% |
| !!! | TATATTATTTGTTGTTGCTT+CGG | - | chr1.2:86148181-86148200 | MS.gene74211:intron | 20.0% |
| !!! | TTATTTTGAGTGAAAAATCA+AGG | + | chr1.2:86146944-86146963 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTTGTTTTGTGTA+TGG | - | chr1.2:86145934-86145953 | MS.gene74211:intron | 20.0% |
| ! | AAAATTGGTATAAAAGAGGA+TGG | + | chr1.2:86145521-86145540 | None:intergenic | 25.0% |
| ! | AACAATAATGTAAGGTTCAA+AGG | + | chr1.2:86146700-86146719 | None:intergenic | 25.0% |
| ! | AAGATACAATGTAGGAAATT+GGG | + | chr1.2:86148781-86148800 | None:intergenic | 25.0% |
| ! | AATTTCACTTGCTTAATTGT+CGG | + | chr1.2:86145340-86145359 | None:intergenic | 25.0% |
| ! | ACATTTACATAACTAACCAT+TGG | + | chr1.2:86145760-86145779 | None:intergenic | 25.0% |
| ! | AGAAATAAAAGTGACAGAAA+TGG | - | chr1.2:86148404-86148423 | MS.gene74211:intron | 25.0% |
| ! | ATATTGAAAAGTGGAAAAGT+AGG | + | chr1.2:86147188-86147207 | None:intergenic | 25.0% |
| ! | ATGCAGAAAATATTGAAAAG+TGG | + | chr1.2:86147197-86147216 | None:intergenic | 25.0% |
| ! | ATTTCAAGGTAACTATGATT+TGG | - | chr1.2:86148078-86148097 | MS.gene74211:CDS | 25.0% |
| ! | CAAAATAAATGAATCTTCCT+TGG | - | chr1.2:86146956-86146975 | MS.gene74211:intron | 25.0% |
| ! | CCAAGCAAGTATTTAATTAT+GGG | - | chr1.2:86148995-86149014 | MS.gene74211:CDS | 25.0% |
| ! | CTAGCAGAAAAATTGAAAAT+TGG | + | chr1.2:86145536-86145555 | None:intergenic | 25.0% |
| ! | GAAGCAACAACAAATAATAT+AGG | + | chr1.2:86148182-86148201 | None:intergenic | 25.0% |
| ! | TAACATTTGATATGTTGAAG+TGG | + | chr1.2:86147423-86147442 | None:intergenic | 25.0% |
| ! | TAAGATACAATGTAGGAAAT+TGG | + | chr1.2:86148782-86148801 | None:intergenic | 25.0% |
| ! | TATTGAAAAGTGGAAAAGTA+GGG | + | chr1.2:86147187-86147206 | None:intergenic | 25.0% |
| ! | TCCAAGCAAGTATTTAATTA+TGG | - | chr1.2:86148994-86149013 | MS.gene74211:CDS | 25.0% |
| ! | TGATTACTACATCTTGATTA+TGG | - | chr1.2:86146760-86146779 | MS.gene74211:intron | 25.0% |
| !! | AAATCAAGGTATTAGTTATG+GGG | + | chr1.2:86146930-86146949 | None:intergenic | 25.0% |
| !! | AAGACTTAGTTTAACCATTT+TGG | - | chr1.2:86148445-86148464 | MS.gene74211:intron | 25.0% |
| !! | AATTACAGCTTTAATTACCT+CGG | + | chr1.2:86146402-86146421 | None:intergenic | 25.0% |
| !! | ACAATTGTTCTTTTCTTTGT+TGG | + | chr1.2:86148238-86148257 | None:intergenic | 25.0% |
| !! | GATTGTATTTTCATTTCCTT+GGG | + | chr1.2:86146507-86146526 | None:intergenic | 25.0% |
| !! | TGATTGTATTTTCATTTCCT+TGG | + | chr1.2:86146508-86146527 | None:intergenic | 25.0% |
| !! | TTAATGTGTCACATCTTTTA+TGG | - | chr1.2:86148799-86148818 | MS.gene74211:intron | 25.0% |
| !! | TTTTAAATTTCAGACACCAA+TGG | - | chr1.2:86145741-86145760 | MS.gene74211:intron | 25.0% |
| !! | TTTTACAATAGAACCTCAAT+GGG | + | chr1.2:86147330-86147349 | None:intergenic | 25.0% |
| !! | TTTTTACAATAGAACCTCAA+TGG | + | chr1.2:86147331-86147350 | None:intergenic | 25.0% |
| !!! | TTTTGTTATGTTGTTTATGG+AGG | - | chr1.2:86148884-86148903 | MS.gene74211:CDS | 25.0% |
| AAAATACCAAAACTGTGTTG+TGG | - | chr1.2:86148587-86148606 | MS.gene74211:intron | 30.0% | |
| AAATATCCAGAAGCAATCTT+TGG | + | chr1.2:86147686-86147705 | None:intergenic | 30.0% | |
| AAATTTCGTTCTTCCAAACA+CGG | + | chr1.2:86146069-86146088 | None:intergenic | 30.0% | |
| AACAATTGTATTAGTCCATG+AGG | - | chr1.2:86148249-86148268 | MS.gene74211:intron | 30.0% | |
| AATATCCAGAAGCAATCTTT+GGG | + | chr1.2:86147685-86147704 | None:intergenic | 30.0% | |
| AATTAACATAGGTTACCTCA+TGG | + | chr1.2:86148267-86148286 | None:intergenic | 30.0% | |
| ACTTACATAGCATTTGCAAA+AGG | - | chr1.2:86147354-86147373 | MS.gene74211:intron | 30.0% | |
| AGATACAATGTAGGAAATTG+GGG | + | chr1.2:86148780-86148799 | None:intergenic | 30.0% | |
| AGTGTGATGCATAATAGATA+AGG | + | chr1.2:86146906-86146925 | None:intergenic | 30.0% | |
| AGTTTCACAACATCTACTTT+AGG | + | chr1.2:86147090-86147109 | None:intergenic | 30.0% | |
| ATATGTTGAAGTGGAATCAT+GGG | + | chr1.2:86147414-86147433 | None:intergenic | 30.0% | |
| CAAGAAAAAAACTAACCCAA+AGG | + | chr1.2:86147725-86147744 | None:intergenic | 30.0% | |
| CACTTCATAATATCAAGTGT+AGG | - | chr1.2:86148212-86148231 | MS.gene74211:intron | 30.0% | |
| CCCATAATTAAATACTTGCT+TGG | + | chr1.2:86148998-86149017 | None:intergenic | 30.0% | |
| CTTGAACGAGTATTAAGATT+TGG | + | chr1.2:86148121-86148140 | None:intergenic | 30.0% | |
| CTTGTAAGCACATATTTGTT+TGG | - | chr1.2:86147643-86147662 | MS.gene74211:CDS | 30.0% | |
| GACAATTAAGCAAGTGAAAT+TGG | - | chr1.2:86145339-86145358 | MS.gene74211:CDS | 30.0% | |
| GACACATTAAGATACAATGT+AGG | + | chr1.2:86148789-86148808 | None:intergenic | 30.0% | |
| GAGTTACAAAATAGTTGAAC+AGG | + | chr1.2:86147796-86147815 | None:intergenic | 30.0% | |
| GTTATAGATTTGACGTGTAA+TGG | - | chr1.2:86148551-86148570 | MS.gene74211:CDS | 30.0% | |
| TAATTATGGGAACCTTAACA+TGG | - | chr1.2:86149008-86149027 | MS.gene74211:CDS | 30.0% | |
| TGTCCATAAAAGTAAACAAG+AGG | + | chr1.2:86146372-86146391 | None:intergenic | 30.0% | |
| TTACTACATCTTGATTATGG+TGG | - | chr1.2:86146763-86146782 | MS.gene74211:intron | 30.0% | |
| TTATTATAGATTGCCGTGTT+TGG | - | chr1.2:86146053-86146072 | MS.gene74211:intron | 30.0% | |
| TTTCCTATAAGGAGTTCAAA+CGG | + | chr1.2:86147029-86147048 | None:intergenic | 30.0% | |
| ! | AAAATTCCACAACACAGTTT+TGG | + | chr1.2:86148596-86148615 | None:intergenic | 30.0% |
| ! | ATCAAATGATTTGATTGGTC+AGG | - | chr1.2:86146140-86146159 | MS.gene74211:intron | 30.0% |
| ! | ATTGTATAAAGTGCTTGTCA+AGG | - | chr1.2:86146562-86146581 | MS.gene74211:intron | 30.0% |
| ! | ATTTTTGTAAACTTGGTCTC+AGG | - | chr1.2:86146999-86147018 | MS.gene74211:intron | 30.0% |
| ! | GATATTTTGCTTAGTAGCTT+TGG | - | chr1.2:86147699-86147718 | MS.gene74211:CDS | 30.0% |
| ! | TCAAATGATTTGATTGGTCA+GGG | - | chr1.2:86146141-86146160 | MS.gene74211:intron | 30.0% |
| ! | TGTTAGGTTTTTACTTGGTA+TGG | - | chr1.2:86145580-86145599 | MS.gene74211:intron | 30.0% |
| ! | TTGATGCAGGAATACTTTTA+TGG | - | chr1.2:86147841-86147860 | MS.gene74211:intron | 30.0% |
| ! | TTGTGTGTTAGGTTTTTACT+TGG | - | chr1.2:86145575-86145594 | MS.gene74211:intron | 30.0% |
| ! | TTTTATTGTGTCTCGTGATT+AGG | - | chr1.2:86145864-86145883 | MS.gene74211:intron | 30.0% |
| !! | ATGCCTCTTGTTTACTTTTA+TGG | - | chr1.2:86146366-86146385 | MS.gene74211:CDS | 30.0% |
| !! | GATTTTCTTTTGAAGGACAA+AGG | + | chr1.2:86148488-86148507 | None:intergenic | 30.0% |
| !!! | AATGTGCATGCTATTTTAGA+AGG | - | chr1.2:86145775-86145794 | MS.gene74211:intron | 30.0% |
| AAAGCCACCTAAATAAGGTT+AGG | + | chr1.2:86148697-86148716 | None:intergenic | 35.0% | |
| AAATCTCAGCGTTTCCATTA+AGG | + | chr1.2:86145420-86145439 | None:intergenic | 35.0% | |
| AACCTGATGAGATCATTTCA+AGG | - | chr1.2:86148064-86148083 | MS.gene74211:CDS | 35.0% | |
| AAGCCACCTAAATAAGGTTA+GGG | + | chr1.2:86148696-86148715 | None:intergenic | 35.0% | |
| AATATCCAAGTCAACAAAGG+TGG | + | chr1.2:86146259-86146278 | None:intergenic | 35.0% | |
| AATCATTAACAACACACCCA+AGG | - | chr1.2:86146488-86146507 | MS.gene74211:intron | 35.0% | |
| ACCAAAAGAACAAGTAAGAG+AGG | + | chr1.2:86146800-86146819 | None:intergenic | 35.0% | |
| AGATGACTCTGTATTATCTC+AGG | - | chr1.2:86145828-86145847 | MS.gene74211:intron | 35.0% | |
| AGTCCAGAAGTAATAGGATA+AGG | - | chr1.2:86147157-86147176 | MS.gene74211:CDS | 35.0% | |
| ATAAATGAATCTTCCTTGGG+AGG | - | chr1.2:86146960-86146979 | MS.gene74211:intron | 35.0% | |
| ATACTAGAGAGACAATTTGC+TGG | - | chr1.2:86146596-86146615 | MS.gene74211:intron | 35.0% | |
| ATAGCATCACATCTCACAAA+CGG | + | chr1.2:86148525-86148544 | None:intergenic | 35.0% | |
| ATATCCAAGTCAACAAAGGT+GGG | + | chr1.2:86146258-86146277 | None:intergenic | 35.0% | |
| ATTAACTGCAATTAGCAGCT+TGG | + | chr1.2:86147461-86147480 | None:intergenic | 35.0% | |
| CAAAAGAACAAGTAAGAGAG+GGG | + | chr1.2:86146798-86146817 | None:intergenic | 35.0% | |
| CCAAAAGAACAAGTAAGAGA+GGG | + | chr1.2:86146799-86146818 | None:intergenic | 35.0% | |
| GAGGAGAAAGATCATTTGTA+AGG | + | chr1.2:86147867-86147886 | None:intergenic | 35.0% | |
| GATAATACAGAGTCATCTGA+AGG | + | chr1.2:86145826-86145845 | None:intergenic | 35.0% | |
| GATATGTTGAAGTGGAATCA+TGG | + | chr1.2:86147415-86147434 | None:intergenic | 35.0% | |
| GGAAGAACGAAATTTGTGAT+TGG | - | chr1.2:86146074-86146093 | MS.gene74211:intron | 35.0% | |
| GTCCAGAAGTAATAGGATAA+GGG | - | chr1.2:86147158-86147177 | MS.gene74211:CDS | 35.0% | |
| GTCTGTTACATAGATAAAGC+CGG | + | chr1.2:86148838-86148857 | None:intergenic | 35.0% | |
| TAACAGACATTGACATTCAG+AGG | - | chr1.2:86148850-86148869 | MS.gene74211:CDS | 35.0% | |
| TACAAAATAGTTGAACAGGC+AGG | + | chr1.2:86147792-86147811 | None:intergenic | 35.0% | |
| TACCCTTATCCTATTACTTC+TGG | + | chr1.2:86147163-86147182 | None:intergenic | 35.0% | |
| TACCTTGAAATGATCTCATC+AGG | + | chr1.2:86148069-86148088 | None:intergenic | 35.0% | |
| TAGATGTTGTGAAACTTCAG+AGG | - | chr1.2:86147094-86147113 | MS.gene74211:intron | 35.0% | |
| TAGGGATCAAACACTATCAT+CGG | + | chr1.2:86148163-86148182 | None:intergenic | 35.0% | |
| TAGTTAAAAACAGTTGGGCA+GGG | - | chr1.2:86148286-86148305 | MS.gene74211:intron | 35.0% | |
| TCAACAAAGCCACCTAAATA+AGG | + | chr1.2:86148702-86148721 | None:intergenic | 35.0% | |
| TCAAGTTTCAAGCCATGTTA+AGG | + | chr1.2:86149023-86149042 | None:intergenic | 35.0% | |
| TGAGATGTGATGCTATATCA+AGG | - | chr1.2:86148529-86148548 | MS.gene74211:CDS | 35.0% | |
| TGGTATAAAAGAGGATGGAA+GGG | + | chr1.2:86145516-86145535 | None:intergenic | 35.0% | |
| TTAGTTAAAAACAGTTGGGC+AGG | - | chr1.2:86148285-86148304 | MS.gene74211:intron | 35.0% | |
| TTGGTATAAAAGAGGATGGA+AGG | + | chr1.2:86145517-86145536 | None:intergenic | 35.0% | |
| TTTCCGTTTGAACTCCTTAT+AGG | - | chr1.2:86147023-86147042 | MS.gene74211:intron | 35.0% | |
| ! | AACGAAATTTGTGATTGGTC+AGG | - | chr1.2:86146079-86146098 | MS.gene74211:intron | 35.0% |
| ! | AATGGAAACGCTGAGATTTT+TGG | - | chr1.2:86145421-86145440 | MS.gene74211:intron | 35.0% |
| ! | ACTGCACAGTTTTTCCTATA+AGG | + | chr1.2:86147040-86147059 | None:intergenic | 35.0% |
| ! | GACTTGTTTGTTTATCGAGT+TGG | - | chr1.2:86147910-86147929 | MS.gene74211:intron | 35.0% |
| ! | GGAATGGTGTTAAATACCAT+GGG | - | chr1.2:86146641-86146660 | MS.gene74211:intron | 35.0% |
| ! | TGCACAGGATTTTCTTTTGA+AGG | + | chr1.2:86148495-86148514 | None:intergenic | 35.0% |
| ! | TGGAATGGTGTTAAATACCA+TGG | - | chr1.2:86146640-86146659 | MS.gene74211:intron | 35.0% |
| !! | AACAGTGCTGATAAATGCAA+AGG | + | chr1.2:86147610-86147629 | None:intergenic | 35.0% |
| !! | ACCTTTGTTGACTTGGATAT+TGG | - | chr1.2:86146258-86146277 | MS.gene74211:CDS | 35.0% |
| !! | ATTCAAGGCTGATGTTGTTT+TGG | - | chr1.2:86146858-86146877 | MS.gene74211:intron | 35.0% |
| !! | CTGCTATTTGATTTTGATGC+AGG | - | chr1.2:86147828-86147847 | MS.gene74211:intron | 35.0% |
| !! | CTTTCTTTGAAACTCACTCA+TGG | - | chr1.2:86145685-86145704 | MS.gene74211:intron | 35.0% |
| !! | TAAACAAGAGGCATTTCAAG+AGG | + | chr1.2:86146360-86146379 | None:intergenic | 35.0% |
| !! | TTGTTTGTTTATCGAGTTGG+TGG | - | chr1.2:86147913-86147932 | MS.gene74211:intron | 35.0% |
| !! | TTTCTTTTGAAGGACAAAGG+AGG | + | chr1.2:86148485-86148504 | None:intergenic | 35.0% |
| !!! | GCTGATGTTGTTTTGGTTTT+GGG | - | chr1.2:86146865-86146884 | MS.gene74211:intron | 35.0% |
| AAAGTGATTTACCTCATCCG+CGG | + | chr1.2:86145647-86145666 | None:intergenic | 40.0% | |
| AAATTGAGCCAGATTTCAGG+TGG | + | chr1.2:86145457-86145476 | None:intergenic | 40.0% | |
| AAGAAAATCCTGTGCAAACG+AGG | - | chr1.2:86148499-86148518 | MS.gene74211:CDS | 40.0% | |
| AATACCATGGGATGGATAGA+AGG | - | chr1.2:86146653-86146672 | MS.gene74211:intron | 40.0% | |
| AATGATCTCATCAGGTTCCT+TGG | + | chr1.2:86148061-86148080 | None:intergenic | 40.0% | |
| AATTGAAATGCCCATCGATC+CGG | - | chr1.2:86146323-86146342 | MS.gene74211:CDS | 40.0% | |
| ACAATGTAGGAAATTGGGGA+TGG | + | chr1.2:86148776-86148795 | None:intergenic | 40.0% | |
| AGGGATCAAACACTATCATC+GGG | + | chr1.2:86148162-86148181 | None:intergenic | 40.0% | |
| AGTGGAATCATGGGAATATG+AGG | + | chr1.2:86147405-86147424 | None:intergenic | 40.0% | |
| ATCATGGGAATATGAGGTCA+CGG | + | chr1.2:86147399-86147418 | None:intergenic | 40.0% | |
| CAAACGAATGTGTGTTCATG+TGG | + | chr1.2:86146457-86146476 | None:intergenic | 40.0% | |
| CAACATCAGCCTTGAATGTA+CGG | + | chr1.2:86146855-86146874 | None:intergenic | 40.0% | |
| CAAGGGTCTATAACAATTCC+TGG | - | chr1.2:86146282-86146301 | MS.gene74211:CDS | 40.0% | |
| CAATGTAGGAAATTGGGGAT+GGG | + | chr1.2:86148775-86148794 | None:intergenic | 40.0% | |
| CAGGAATTGTTATAGACCCT+TGG | + | chr1.2:86146284-86146303 | None:intergenic | 40.0% | |
| CGAATTTGAACCAGTAACAG+CGG | + | chr1.2:86145314-86145333 | None:intergenic | 40.0% | |
| GAATTTGAACCAGTAACAGC+GGG | + | chr1.2:86145313-86145332 | None:intergenic | 40.0% | |
| GCCAATATCCAAGTCAACAA+AGG | + | chr1.2:86146262-86146281 | None:intergenic | 40.0% | |
| GGAAAATTGAGCCAGATTTC+AGG | + | chr1.2:86145460-86145479 | None:intergenic | 40.0% | |
| GGAAGGGAATAGAAGAGTTA+CGG | + | chr1.2:86145500-86145519 | None:intergenic | 40.0% | |
| GTAGTCTTTCCAGAATCTGA+AGG | + | chr1.2:86146189-86146208 | None:intergenic | 40.0% | |
| GTCAAGGATGCTTCTTAGTT+GGG | - | chr1.2:86146212-86146231 | MS.gene74211:intron | 40.0% | |
| TATCAACCTACTTGCAACAG+CGG | + | chr1.2:86148334-86148353 | None:intergenic | 40.0% | |
| TATTACTTCTGGACTTCTGG+CGG | + | chr1.2:86147152-86147171 | None:intergenic | 40.0% | |
| TCCTATTACTTCTGGACTTC+TGG | + | chr1.2:86147155-86147174 | None:intergenic | 40.0% | |
| TCTCGTGATTAGGAGAAGAT+TGG | - | chr1.2:86145874-86145893 | MS.gene74211:intron | 40.0% | |
| TGGATGCTTCATGTATCTGT+TGG | - | chr1.2:86145894-86145913 | MS.gene74211:intron | 40.0% | |
| TGGTCAGGTGTATGATGTAT+AGG | - | chr1.2:86146094-86146113 | MS.gene74211:intron | 40.0% | |
| TGTCAAGGATGCTTCTTAGT+TGG | - | chr1.2:86146211-86146230 | MS.gene74211:intron | 40.0% | |
| TGTTGTGAAACTTCAGAGGT+CGG | - | chr1.2:86147098-86147117 | MS.gene74211:intron | 40.0% | |
| ! | CCCTCTCTTACTTGTTCTTT+TGG | - | chr1.2:86146796-86146815 | MS.gene74211:intron | 40.0% |
| ! | GCTTGACCCTAACCTTATTT+AGG | - | chr1.2:86148687-86148706 | MS.gene74211:CDS | 40.0% |
| ! | TGACCCTAACCTTATTTAGG+TGG | - | chr1.2:86148690-86148709 | MS.gene74211:CDS | 40.0% |
| ! | TGGTGTTAAATACCATGGGA+TGG | - | chr1.2:86146645-86146664 | MS.gene74211:intron | 40.0% |
| !! | ACTAAGAAGCATCCTTGACA+AGG | + | chr1.2:86146211-86146230 | None:intergenic | 40.0% |
| !! | AGGAGTACCATCCATTTCAA+TGG | + | chr1.2:86145611-86145630 | None:intergenic | 40.0% |
| !! | CTGTTGCAAGTAGGTTGATA+TGG | - | chr1.2:86148334-86148353 | MS.gene74211:intron | 40.0% |
| !! | GTATGGTGCTACCATTGAAA+TGG | - | chr1.2:86145597-86145616 | MS.gene74211:intron | 40.0% |
| !! | TGCAAGTAGGTTGATATGGA+AGG | - | chr1.2:86148338-86148357 | MS.gene74211:intron | 40.0% |
| !! | TTGACTTGGATATTGGCCAA+GGG | - | chr1.2:86146265-86146284 | MS.gene74211:CDS | 40.0% |
| !! | TTGTTTATCGAGTTGGTGGT+GGG | - | chr1.2:86147917-86147936 | MS.gene74211:intron | 40.0% |
| !! | TTTGTTTATCGAGTTGGTGG+TGG | - | chr1.2:86147916-86147935 | MS.gene74211:intron | 40.0% |
| !!! | GGCTGATGTTGTTTTGGTTT+TGG | - | chr1.2:86146864-86146883 | MS.gene74211:intron | 40.0% |
| ACATACCTTACACCATCTGC+TGG | - | chr1.2:86148965-86148984 | MS.gene74211:CDS | 45.0% | |
| AGATAAGGCTACCATCTACC+TGG | + | chr1.2:86146891-86146910 | None:intergenic | 45.0% | |
| AGGAAATTGGGGATGGGAAA+GGG | + | chr1.2:86148769-86148788 | None:intergenic | 45.0% | |
| ATGGATGGTACTCCTGAAAC+TGG | - | chr1.2:86145616-86145635 | MS.gene74211:intron | 45.0% | |
| ATGGGATGGATAGAAGGAGT+GGG | - | chr1.2:86146659-86146678 | MS.gene74211:intron | 45.0% | |
| CAAAAGGCCTATTACACGAC+TGG | - | chr1.2:86147370-86147389 | MS.gene74211:intron | 45.0% | |
| CAATTTCCGCTGTTGCAAGT+AGG | - | chr1.2:86148325-86148344 | MS.gene74211:intron | 45.0% | |
| CATTGCCCAAAGATTGCTTC+TGG | - | chr1.2:86147677-86147696 | MS.gene74211:CDS | 45.0% | |
| CTGGAAAGACTACCTTGTCA+AGG | - | chr1.2:86146196-86146215 | MS.gene74211:intron | 45.0% | |
| CTTAGTTGGGCAGCAAAACA+AGG | - | chr1.2:86146225-86146244 | MS.gene74211:intron | 45.0% | |
| CTTCGTCTTCGACTCCTTAA+TGG | - | chr1.2:86145403-86145422 | MS.gene74211:intron | 45.0% | |
| GATGGGCATTTCAATTGGAG+TGG | + | chr1.2:86146319-86146338 | None:intergenic | 45.0% | |
| GCATGCAATCCGTACATTCA+AGG | - | chr1.2:86146843-86146862 | MS.gene74211:intron | 45.0% | |
| GCCAGAAGTCCAGAAGTAAT+AGG | - | chr1.2:86147151-86147170 | MS.gene74211:intron | 45.0% | |
| GGATCGATGGGCATTTCAAT+TGG | + | chr1.2:86146324-86146343 | None:intergenic | 45.0% | |
| GTCCAACAACAATCACCCTA+GGG | + | chr1.2:86146167-86146186 | None:intergenic | 45.0% | |
| GTGAATGTTACGAATGCCCA+AGG | + | chr1.2:86147761-86147780 | None:intergenic | 45.0% | |
| GTTGTGAAACTTCAGAGGTC+GGG | - | chr1.2:86147099-86147118 | MS.gene74211:intron | 45.0% | |
| GTTGTTGGACCTTCAGATTC+TGG | - | chr1.2:86146177-86146196 | MS.gene74211:intron | 45.0% | |
| TAGGAAATTGGGGATGGGAA+AGG | + | chr1.2:86148770-86148789 | None:intergenic | 45.0% | |
| TCATGGGAATATGAGGTCAC+GGG | + | chr1.2:86147398-86147417 | None:intergenic | 45.0% | |
| TCCTGAAACTGGTTATACCG+CGG | - | chr1.2:86145627-86145646 | MS.gene74211:intron | 45.0% | |
| TTAAGGAGTCGAAGACGAAG+AGG | + | chr1.2:86145403-86145422 | None:intergenic | 45.0% | |
| TTATGGTGCAGCAATGTTGC+CGG | - | chr1.2:86148816-86148835 | MS.gene74211:intron | 45.0% | |
| TTCACAGCTACAACTCTCGT+TGG | + | chr1.2:86147994-86148013 | None:intergenic | 45.0% | |
| TTGCTCAGAGACGTGCTTAA+GGG | - | chr1.2:86147060-86147079 | MS.gene74211:intron | 45.0% | |
| TTTATGGACACACATCTCCG+AGG | - | chr1.2:86146382-86146401 | MS.gene74211:CDS | 45.0% | |
| TTTGCTCAGAGACGTGCTTA+AGG | - | chr1.2:86147059-86147078 | MS.gene74211:intron | 45.0% | |
| ! | AATATACAGAGCACCTCCCA+AGG | + | chr1.2:86146976-86146995 | None:intergenic | 45.0% |
| ! | GGTGCTACCATTGAAATGGA+TGG | - | chr1.2:86145601-86145620 | MS.gene74211:intron | 45.0% |
| ! | TTGTTTTCTCCCTGCTCCTT+GGG | - | chr1.2:86147742-86147761 | MS.gene74211:CDS | 45.0% |
| !! | CTTTGAAACTCACTCATGGC+TGG | - | chr1.2:86145689-86145708 | MS.gene74211:intron | 45.0% |
| !! | GCTTAGTAGCTTTGGCCTTT+GGG | - | chr1.2:86147707-86147726 | MS.gene74211:CDS | 45.0% |
| !! | GTTGACTTGGATATTGGCCA+AGG | - | chr1.2:86146264-86146283 | MS.gene74211:CDS | 45.0% |
| !! | TGCTTAGTAGCTTTGGCCTT+TGG | - | chr1.2:86147706-86147725 | MS.gene74211:CDS | 45.0% |
| !!! | TGTTGTTTTGGTTTTGGGCC+AGG | - | chr1.2:86146870-86146889 | MS.gene74211:intron | 45.0% |
| !! | CATTATTATTATTATTATTA+AGG | - | chr1.2:86146012-86146031 | MS.gene74211:intron | 5.0% |
| AACTGGTTATACCGCGGATG+AGG | - | chr1.2:86145633-86145652 | MS.gene74211:intron | 50.0% | |
| ACGGGTTCCAGTCGTGTAAT+AGG | + | chr1.2:86147380-86147399 | None:intergenic | 50.0% | |
| AGGTTCTGCTCCAATTGGCA+AGG | + | chr1.2:86147962-86147981 | None:intergenic | 50.0% | |
| AGTTACGGCGAACTTGAGTC+TGG | + | chr1.2:86145485-86145504 | None:intergenic | 50.0% | |
| CACTCCTTCTATCCATCCCA+TGG | + | chr1.2:86146660-86146679 | None:intergenic | 50.0% | |
| CATGGGATGGATAGAAGGAG+TGG | - | chr1.2:86146658-86146677 | MS.gene74211:intron | 50.0% | |
| CCTTGGCAAATGAGACAGCA+AGG | + | chr1.2:86148044-86148063 | None:intergenic | 50.0% | |
| CTTGGAAGTTCTCCAGCAGA+TGG | + | chr1.2:86148980-86148999 | None:intergenic | 50.0% | |
| GCAAGTTGTAACCACAGTGG+GGG | - | chr1.2:86147287-86147306 | MS.gene74211:intron | 50.0% | |
| GGCAAGTTGTAACCACAGTG+GGG | - | chr1.2:86147286-86147305 | MS.gene74211:intron | 50.0% | |
| GGGCAAGTTGTAACCACAGT+GGG | - | chr1.2:86147285-86147304 | MS.gene74211:intron | 50.0% | |
| GGTCCAACAACAATCACCCT+AGG | + | chr1.2:86146168-86146187 | None:intergenic | 50.0% | |
| GTAACCACAGTGGGGGTTTA+GGG | - | chr1.2:86147294-86147313 | MS.gene74211:intron | 50.0% | |
| GTTACGGCGAACTTGAGTCT+GGG | + | chr1.2:86145484-86145503 | None:intergenic | 50.0% | |
| GTTCTCCAGCAGATGGTGTA+AGG | + | chr1.2:86148973-86148992 | None:intergenic | 50.0% | |
| GTTGGGCAGCAAAACAAGGT+TGG | - | chr1.2:86146229-86146248 | MS.gene74211:intron | 50.0% | |
| TAACACCATTCCAGCAGCTC+TGG | + | chr1.2:86146633-86146652 | None:intergenic | 50.0% | |
| TCAAGAGGAATTCCCTCCAC+CGG | + | chr1.2:86146345-86146364 | None:intergenic | 50.0% | |
| TCCGCGGTATAACCAGTTTC+AGG | + | chr1.2:86145631-86145650 | None:intergenic | 50.0% | |
| TCGAAGACGAAGAGGTGAGT+CGG | + | chr1.2:86145395-86145414 | None:intergenic | 50.0% | |
| TGAAACTCACTCATGGCTGG+CGG | - | chr1.2:86145692-86145711 | MS.gene74211:intron | 50.0% | |
| TGGGCAAGTTGTAACCACAG+TGG | - | chr1.2:86147284-86147303 | MS.gene74211:intron | 50.0% | |
| TGTAACCACAGTGGGGGTTT+AGG | - | chr1.2:86147293-86147312 | MS.gene74211:intron | 50.0% | |
| TTACGAATGCCCAAGGAGCA+GGG | + | chr1.2:86147754-86147773 | None:intergenic | 50.0% | |
| ! | ATTTGATTGGTCAGGGCCCT+AGG | - | chr1.2:86146148-86146167 | MS.gene74211:intron | 50.0% |
| ! | CCAGATTTCAGGTGGAAGCT+CGG | + | chr1.2:86145449-86145468 | None:intergenic | 50.0% |
| ! | CCTTGCTGTCTCATTTGCCA+AGG | - | chr1.2:86148041-86148060 | MS.gene74211:CDS | 50.0% |
| ! | GAAGCCCACCTTTGTTGACT+TGG | - | chr1.2:86146251-86146270 | MS.gene74211:CDS | 50.0% |
| ! | TTTGATTGGTCAGGGCCCTA+GGG | - | chr1.2:86146149-86146168 | MS.gene74211:intron | 50.0% |
| !! | CTTGTTTTCTCCCTGCTCCT+TGG | - | chr1.2:86147741-86147760 | MS.gene74211:CDS | 50.0% |
| !!! | TTGGTTTTGGGCCAGGTAGA+TGG | - | chr1.2:86146877-86146896 | MS.gene74211:intron | 50.0% |
| AAAACAGTTGGGCAGGGAGC+TGG | - | chr1.2:86148292-86148311 | MS.gene74211:intron | 55.0% | |
| AAACAGTTGGGCAGGGAGCT+GGG | - | chr1.2:86148293-86148312 | MS.gene74211:intron | 55.0% | |
| AATTCCCTCCACCGGATCGA+TGG | + | chr1.2:86146337-86146356 | None:intergenic | 55.0% | |
| ACAAACGGCCTCGTTTGCAC+AGG | + | chr1.2:86148510-86148529 | None:intergenic | 55.0% | |
| ACTCTCGTTGGATCTGCAGC+AGG | + | chr1.2:86147982-86148001 | None:intergenic | 55.0% | |
| AGTGCTTGTCAAGGAGCTCG+CGG | - | chr1.2:86146571-86146590 | MS.gene74211:intron | 55.0% | |
| ATGAGACAGCAAGGACTGCG+TGG | + | chr1.2:86148035-86148054 | None:intergenic | 55.0% | |
| ATTCCCTCCACCGGATCGAT+GGG | + | chr1.2:86146336-86146355 | None:intergenic | 55.0% | |
| CCGAGCTTCCACCTGAAATC+TGG | - | chr1.2:86145446-86145465 | MS.gene74211:intron | 55.0% | |
| GACTTCTGGCGGAACTTCAC+AGG | + | chr1.2:86147141-86147160 | None:intergenic | 55.0% | |
| GCAGCAGGTTCTGCTCCAAT+TGG | + | chr1.2:86147967-86147986 | None:intergenic | 55.0% | |
| GGCCCTAGGGTGATTGTTGT+TGG | - | chr1.2:86146162-86146181 | MS.gene74211:intron | 55.0% | |
| GGGAAGGTTTGAGCCCATTG+AGG | - | chr1.2:86147314-86147333 | MS.gene74211:intron | 55.0% | |
| GGTCGGGTGGAGTTGTATCT+AGG | - | chr1.2:86147115-86147134 | MS.gene74211:intron | 55.0% | |
| GTGAAACTTCAGAGGTCGGG+TGG | - | chr1.2:86147102-86147121 | MS.gene74211:intron | 55.0% | |
| GTTACGAATGCCCAAGGAGC+AGG | + | chr1.2:86147755-86147774 | None:intergenic | 55.0% | |
| TAACAAGTGCGAGTGCCCCT+CGG | - | chr1.2:86148654-86148673 | MS.gene74211:intron | 55.0% | |
| TCAAGCTAACCAGTGCCCGA+GGG | + | chr1.2:86148673-86148692 | None:intergenic | 55.0% | |
| TGAAATGCCCATCGATCCGG+TGG | - | chr1.2:86146326-86146345 | MS.gene74211:CDS | 55.0% | |
| !! | CATTCCAGCAGCTCTGGACT+CGG | + | chr1.2:86146627-86146646 | None:intergenic | 55.0% |
| AACAAGTGCGAGTGCCCCTC+GGG | - | chr1.2:86148655-86148674 | MS.gene74211:intron | 60.0% | |
| AAGGCAGAGCGTGGAGCTTG+TGG | + | chr1.2:86147943-86147962 | None:intergenic | 60.0% | |
| AATGCCCATCGATCCGGTGG+AGG | - | chr1.2:86146329-86146348 | MS.gene74211:CDS | 60.0% | |
| AATGCCGAGTCCAGAGCTGC+TGG | - | chr1.2:86146620-86146639 | MS.gene74211:intron | 60.0% | |
| ACGGCGAACTTGAGTCTGGG+AGG | + | chr1.2:86145481-86145500 | None:intergenic | 60.0% | |
| ATGCCCATCGATCCGGTGGA+GGG | - | chr1.2:86146330-86146349 | MS.gene74211:CDS | 60.0% | |
| CAAGCTAACCAGTGCCCGAG+GGG | + | chr1.2:86148672-86148691 | None:intergenic | 60.0% | |
| CCAATTGGCAAGGCAGAGCG+TGG | + | chr1.2:86147952-86147971 | None:intergenic | 60.0% | |
| CCACAGTGGGGGTTTAGGGA+AGG | - | chr1.2:86147298-86147317 | MS.gene74211:intron | 60.0% | |
| CCACGCTCTGCCTTGCCAAT+TGG | - | chr1.2:86147949-86147968 | MS.gene74211:CDS | 60.0% | |
| CCTTCCCTAAACCCCCACTG+TGG | + | chr1.2:86147301-86147320 | None:intergenic | 60.0% | |
| CGAGTCCAGAGCTGCTGGAA+TGG | - | chr1.2:86146625-86146644 | MS.gene74211:intron | 60.0% | |
| GGAGTGGCAGCAATGCATCC+AGG | + | chr1.2:86146303-86146322 | None:intergenic | 60.0% | |
| GTCAAGCTAACCAGTGCCCG+AGG | + | chr1.2:86148674-86148693 | None:intergenic | 60.0% | |
| GTGCTTGTCAAGGAGCTCGC+GGG | - | chr1.2:86146572-86146591 | MS.gene74211:intron | 60.0% | |
| TGCTTGTCAAGGAGCTCGCG+GGG | - | chr1.2:86146573-86146592 | MS.gene74211:intron | 60.0% | |
| CTCACTCATGGCTGGCGGAG+AGG | - | chr1.2:86145697-86145716 | MS.gene74211:intron | 65.0% | |
| GGTGCAGGTCCCGCTGTTAC+TGG | - | chr1.2:86145301-86145320 | MS.gene74211:CDS | 65.0% | |
| TGCGAGTGCCCCTCGGGCAC+TGG | - | chr1.2:86148661-86148680 | MS.gene74211:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 86145289 | 86149042 | 86145289 | ID=MS.gene74211 |
| chr1.2 | mRNA | 86145289 | 86149042 | 86145289 | ID=MS.gene74211.t1;Parent=MS.gene74211 |
| chr1.2 | exon | 86148833 | 86149042 | 86148833 | ID=MS.gene74211.t1.exon1;Parent=MS.gene74211.t1 |
| chr1.2 | CDS | 86148833 | 86149042 | 86148833 | ID=cds.MS.gene74211.t1;Parent=MS.gene74211.t1 |
| chr1.2 | exon | 86148677 | 86148745 | 86148677 | ID=MS.gene74211.t1.exon2;Parent=MS.gene74211.t1 |
| chr1.2 | CDS | 86148677 | 86148745 | 86148677 | ID=cds.MS.gene74211.t1;Parent=MS.gene74211.t1 |
| chr1.2 | exon | 86148482 | 86148577 | 86148482 | ID=MS.gene74211.t1.exon3;Parent=MS.gene74211.t1 |
| chr1.2 | CDS | 86148482 | 86148577 | 86148482 | ID=cds.MS.gene74211.t1;Parent=MS.gene74211.t1 |
| chr1.2 | exon | 86147928 | 86148169 | 86147928 | ID=MS.gene74211.t1.exon4;Parent=MS.gene74211.t1 |
| chr1.2 | CDS | 86147928 | 86148169 | 86147928 | ID=cds.MS.gene74211.t1;Parent=MS.gene74211.t1 |
| chr1.2 | exon | 86147643 | 86147781 | 86147643 | ID=MS.gene74211.t1.exon5;Parent=MS.gene74211.t1 |
| chr1.2 | CDS | 86147643 | 86147781 | 86147643 | ID=cds.MS.gene74211.t1;Parent=MS.gene74211.t1 |
| chr1.2 | exon | 86147440 | 86147496 | 86147440 | ID=MS.gene74211.t1.exon6;Parent=MS.gene74211.t1 |
| chr1.2 | CDS | 86147440 | 86147496 | 86147440 | ID=cds.MS.gene74211.t1;Parent=MS.gene74211.t1 |
| chr1.2 | exon | 86147152 | 86147286 | 86147152 | ID=MS.gene74211.t1.exon7;Parent=MS.gene74211.t1 |
| chr1.2 | CDS | 86147152 | 86147286 | 86147152 | ID=cds.MS.gene74211.t1;Parent=MS.gene74211.t1 |
| chr1.2 | exon | 86146246 | 86146481 | 86146246 | ID=MS.gene74211.t1.exon8;Parent=MS.gene74211.t1 |
| chr1.2 | CDS | 86146246 | 86146481 | 86146246 | ID=cds.MS.gene74211.t1;Parent=MS.gene74211.t1 |
| chr1.2 | exon | 86145460 | 86145504 | 86145460 | ID=MS.gene74211.t1.exon9;Parent=MS.gene74211.t1 |
| chr1.2 | CDS | 86145460 | 86145504 | 86145460 | ID=cds.MS.gene74211.t1;Parent=MS.gene74211.t1 |
| chr1.2 | exon | 86145289 | 86145376 | 86145289 | ID=MS.gene74211.t1.exon10;Parent=MS.gene74211.t1 |
| chr1.2 | CDS | 86145289 | 86145376 | 86145289 | ID=cds.MS.gene74211.t1;Parent=MS.gene74211.t1 |
| Gene Sequence |
| Protein sequence |
