Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74445.t1 | XP_003618856.1 | 96.2 | 264 | 10 | 0 | 1 | 264 | 1 | 264 | 1.80E-133 | 485.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74445.t1 | Q5C9I9 | 57.8 | 249 | 105 | 0 | 12 | 260 | 6 | 254 | 1.5e-72 | 274.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74445.t1 | G7KNQ1 | 96.2 | 264 | 10 | 0 | 1 | 264 | 1 | 264 | 1.3e-133 | 485.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060803 | MS.gene74445 | 0.819528 | 1.11E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74445.t1 | MTR_6g023950 | 96.212 | 264 | 10 | 0 | 1 | 264 | 1 | 264 | 0.0 | 518 |
| MS.gene74445.t1 | MTR_6g023590 | 87.786 | 262 | 32 | 0 | 1 | 262 | 1 | 262 | 4.20e-171 | 473 |
| MS.gene74445.t1 | MTR_6g023990 | 82.890 | 263 | 44 | 1 | 1 | 262 | 1 | 263 | 4.40e-160 | 445 |
| MS.gene74445.t1 | MTR_6g023600 | 86.641 | 262 | 35 | 0 | 1 | 262 | 1 | 262 | 6.79e-159 | 442 |
| MS.gene74445.t1 | MTR_6g023600 | 85.115 | 262 | 33 | 1 | 1 | 262 | 1 | 256 | 1.02e-152 | 426 |
| MS.gene74445.t1 | MTR_6g023610 | 72.414 | 261 | 72 | 0 | 1 | 261 | 1 | 261 | 2.91e-136 | 385 |
| MS.gene74445.t1 | MTR_6g023910 | 71.264 | 261 | 75 | 0 | 1 | 261 | 1 | 261 | 2.78e-135 | 382 |
| MS.gene74445.t1 | MTR_7g110130 | 52.590 | 251 | 118 | 1 | 12 | 262 | 5 | 254 | 1.78e-90 | 269 |
| MS.gene74445.t1 | MTR_7g110140 | 51.172 | 256 | 123 | 2 | 9 | 264 | 2 | 255 | 1.74e-89 | 266 |
| MS.gene74445.t1 | MTR_2g090165 | 49.407 | 253 | 126 | 2 | 12 | 264 | 5 | 255 | 2.57e-83 | 250 |
| MS.gene74445.t1 | MTR_7g105460 | 47.348 | 264 | 137 | 2 | 1 | 264 | 1 | 262 | 5.89e-78 | 237 |
| MS.gene74445.t1 | MTR_4g052300 | 48.617 | 253 | 125 | 3 | 8 | 260 | 3 | 250 | 1.08e-77 | 236 |
| MS.gene74445.t1 | MTR_4g052340 | 48.462 | 260 | 128 | 4 | 1 | 259 | 1 | 255 | 1.89e-77 | 236 |
| MS.gene74445.t1 | MTR_7g110160 | 48.617 | 253 | 110 | 2 | 12 | 264 | 5 | 237 | 1.43e-76 | 233 |
| MS.gene74445.t1 | MTR_4g052350 | 46.565 | 262 | 134 | 4 | 1 | 261 | 1 | 257 | 1.60e-75 | 231 |
| MS.gene74445.t1 | MTR_4g052320 | 47.471 | 257 | 131 | 3 | 8 | 264 | 3 | 255 | 1.61e-74 | 228 |
| MS.gene74445.t1 | MTR_6g035395 | 47.826 | 253 | 117 | 3 | 12 | 264 | 4 | 241 | 9.58e-74 | 225 |
| MS.gene74445.t1 | MTR_7g071680 | 42.662 | 293 | 133 | 8 | 1 | 261 | 4 | 293 | 3.90e-67 | 210 |
| MS.gene74445.t1 | MTR_7g107670 | 41.379 | 261 | 145 | 4 | 6 | 261 | 26 | 283 | 4.50e-64 | 202 |
| MS.gene74445.t1 | MTR_4g078630 | 44.358 | 257 | 132 | 4 | 12 | 261 | 18 | 270 | 1.12e-61 | 196 |
| MS.gene74445.t1 | MTR_7g083870 | 40.541 | 259 | 145 | 5 | 12 | 264 | 34 | 289 | 4.89e-59 | 189 |
| MS.gene74445.t1 | MTR_3g020670 | 43.243 | 259 | 138 | 5 | 12 | 263 | 15 | 271 | 1.87e-56 | 182 |
| MS.gene74445.t1 | MTR_7g105590 | 46.032 | 189 | 100 | 2 | 12 | 200 | 7 | 193 | 1.78e-54 | 174 |
| MS.gene74445.t1 | MTR_7g105580 | 39.044 | 251 | 133 | 4 | 12 | 262 | 7 | 237 | 1.57e-53 | 174 |
| MS.gene74445.t1 | MTR_4g084800 | 54.545 | 143 | 64 | 1 | 1 | 143 | 1 | 142 | 5.02e-50 | 162 |
| MS.gene74445.t1 | MTR_6g023940 | 45.283 | 212 | 46 | 3 | 1 | 208 | 1 | 146 | 2.68e-49 | 160 |
| MS.gene74445.t1 | MTR_3g113870 | 43.169 | 183 | 101 | 3 | 21 | 203 | 29 | 208 | 1.59e-44 | 150 |
| MS.gene74445.t1 | MTR_7g105570 | 44.809 | 183 | 100 | 1 | 82 | 264 | 38 | 219 | 1.68e-42 | 145 |
| MS.gene74445.t1 | MTR_7g113650 | 31.698 | 265 | 164 | 7 | 5 | 260 | 32 | 288 | 8.25e-32 | 119 |
| MS.gene74445.t1 | MTR_4g131740 | 32.472 | 271 | 155 | 8 | 5 | 260 | 32 | 289 | 6.24e-31 | 116 |
| MS.gene74445.t1 | MTR_1g082760 | 31.698 | 265 | 164 | 7 | 5 | 260 | 32 | 288 | 1.80e-30 | 115 |
| MS.gene74445.t1 | MTR_3g085740 | 30.855 | 269 | 164 | 9 | 1 | 261 | 64 | 318 | 2.81e-28 | 110 |
| MS.gene74445.t1 | MTR_1196s0010 | 35.039 | 254 | 146 | 10 | 16 | 264 | 277 | 516 | 2.26e-27 | 110 |
| MS.gene74445.t1 | MTR_4g132850 | 30.556 | 252 | 164 | 7 | 12 | 261 | 6 | 248 | 3.98e-24 | 97.8 |
| MS.gene74445.t1 | MTR_4g058810 | 28.346 | 254 | 173 | 5 | 13 | 260 | 11 | 261 | 1.38e-23 | 96.7 |
| MS.gene74445.t1 | MTR_1g051165 | 29.389 | 262 | 167 | 8 | 12 | 260 | 13 | 269 | 7.74e-23 | 95.1 |
| MS.gene74445.t1 | MTR_7g063320 | 32.046 | 259 | 156 | 7 | 13 | 261 | 15 | 263 | 1.33e-22 | 94.0 |
| MS.gene74445.t1 | MTR_4g058840 | 27.413 | 259 | 169 | 6 | 13 | 260 | 11 | 261 | 2.36e-22 | 93.6 |
| MS.gene74445.t1 | MTR_4g058820 | 27.413 | 259 | 169 | 6 | 13 | 260 | 11 | 261 | 2.36e-22 | 93.6 |
| MS.gene74445.t1 | MTR_7g094510 | 29.344 | 259 | 169 | 6 | 10 | 261 | 3 | 254 | 1.14e-21 | 91.3 |
| MS.gene74445.t1 | MTR_7g094520 | 30.859 | 256 | 163 | 7 | 13 | 261 | 11 | 259 | 2.55e-21 | 90.5 |
| MS.gene74445.t1 | MTR_7g063360 | 29.804 | 255 | 167 | 7 | 13 | 261 | 16 | 264 | 6.78e-19 | 84.0 |
| MS.gene74445.t1 | MTR_4g064887 | 27.170 | 265 | 183 | 7 | 1 | 261 | 1 | 259 | 2.29e-18 | 82.4 |
| MS.gene74445.t1 | MTR_7g063330 | 28.571 | 252 | 173 | 5 | 13 | 261 | 15 | 262 | 4.53e-18 | 81.6 |
| MS.gene74445.t1 | MTR_3g068085 | 28.517 | 263 | 178 | 7 | 2 | 261 | 4 | 259 | 1.32e-17 | 80.5 |
| MS.gene74445.t1 | MTR_7g105560 | 56.716 | 67 | 28 | 1 | 1 | 67 | 1 | 66 | 2.83e-17 | 77.0 |
| MS.gene74445.t1 | MTR_1g068955 | 29.961 | 257 | 165 | 7 | 11 | 259 | 12 | 261 | 4.82e-17 | 79.0 |
| MS.gene74445.t1 | MTR_3g068155 | 29.057 | 265 | 174 | 9 | 3 | 261 | 7 | 263 | 4.86e-17 | 79.0 |
| MS.gene74445.t1 | MTR_3g068175 | 29.434 | 265 | 173 | 9 | 3 | 261 | 5 | 261 | 5.72e-17 | 79.0 |
| MS.gene74445.t1 | MTR_7g063270 | 29.119 | 261 | 160 | 9 | 13 | 261 | 16 | 263 | 5.79e-17 | 78.6 |
| MS.gene74445.t1 | MTR_7g063390 | 29.020 | 255 | 169 | 7 | 13 | 261 | 16 | 264 | 9.88e-17 | 78.2 |
| MS.gene74445.t1 | MTR_7g063260 | 29.231 | 260 | 162 | 9 | 13 | 261 | 16 | 264 | 4.12e-16 | 76.3 |
| MS.gene74445.t1 | MTR_3g068065 | 28.175 | 252 | 171 | 7 | 13 | 261 | 17 | 261 | 1.80e-15 | 74.7 |
| MS.gene74445.t1 | MTR_4g058830 | 29.412 | 153 | 104 | 2 | 110 | 260 | 57 | 207 | 1.27e-12 | 65.9 |
| MS.gene74445.t1 | MTR_4g064887 | 26.415 | 212 | 149 | 5 | 1 | 208 | 1 | 209 | 1.28e-12 | 65.9 |
| MS.gene74445.t1 | MTR_1g007800 | 25.097 | 259 | 180 | 7 | 7 | 259 | 2 | 252 | 3.67e-12 | 65.1 |
| MS.gene74445.t1 | MTR_4g134660 | 25.676 | 222 | 158 | 6 | 16 | 232 | 9 | 228 | 3.73e-12 | 64.7 |
| MS.gene74445.t1 | MTR_8g044240 | 28.708 | 209 | 134 | 6 | 6 | 203 | 62 | 266 | 6.02e-12 | 65.1 |
| MS.gene74445.t1 | MTR_4g097510 | 26.829 | 205 | 139 | 6 | 16 | 219 | 5 | 199 | 6.29e-12 | 64.7 |
| MS.gene74445.t1 | MTR_4g086400 | 27.670 | 206 | 135 | 4 | 14 | 207 | 5 | 208 | 1.62e-11 | 64.3 |
| MS.gene74445.t1 | MTR_3g087850 | 25.806 | 217 | 151 | 5 | 14 | 229 | 27 | 234 | 8.62e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74445.t1 | AT2G47140 | 49.802 | 253 | 125 | 2 | 12 | 264 | 5 | 255 | 1.59e-85 | 256 |
| MS.gene74445.t1 | AT3G29250 | 48.062 | 258 | 124 | 4 | 11 | 264 | 4 | 255 | 4.57e-79 | 239 |
| MS.gene74445.t1 | AT3G29250 | 47.710 | 262 | 127 | 4 | 7 | 264 | 36 | 291 | 6.89e-79 | 240 |
| MS.gene74445.t1 | AT2G47130 | 48.062 | 258 | 123 | 4 | 11 | 264 | 4 | 254 | 5.79e-78 | 236 |
| MS.gene74445.t1 | AT3G29260 | 49.416 | 257 | 119 | 4 | 12 | 264 | 5 | 254 | 2.52e-77 | 235 |
| MS.gene74445.t1 | AT3G29250 | 47.656 | 256 | 124 | 4 | 13 | 264 | 44 | 293 | 5.48e-77 | 236 |
| MS.gene74445.t1 | AT2G47120 | 45.276 | 254 | 135 | 4 | 11 | 264 | 4 | 253 | 2.53e-73 | 225 |
| MS.gene74445.t1 | AT2G47120 | 45.059 | 253 | 135 | 4 | 12 | 264 | 6 | 254 | 9.23e-73 | 223 |
| MS.gene74445.t1 | AT3G26770 | 43.137 | 255 | 136 | 5 | 12 | 260 | 40 | 291 | 6.70e-64 | 202 |
| MS.gene74445.t1 | AT1G52340 | 44.275 | 262 | 130 | 6 | 12 | 261 | 17 | 274 | 2.20e-60 | 192 |
| MS.gene74445.t1 | AT4G03140 | 40.698 | 258 | 145 | 4 | 12 | 264 | 77 | 331 | 6.29e-60 | 193 |
| MS.gene74445.t1 | AT3G26760 | 39.924 | 263 | 147 | 6 | 7 | 261 | 30 | 289 | 1.75e-59 | 191 |
| MS.gene74445.t1 | AT3G51680 | 41.176 | 272 | 141 | 6 | 7 | 260 | 23 | 293 | 2.05e-59 | 191 |
| MS.gene74445.t1 | AT3G42960 | 43.346 | 263 | 135 | 7 | 8 | 261 | 3 | 260 | 1.77e-51 | 169 |
| MS.gene74445.t1 | AT2G47150 | 33.203 | 256 | 108 | 7 | 13 | 264 | 1 | 197 | 2.41e-31 | 115 |
| MS.gene74445.t1 | AT1G54870 | 32.308 | 260 | 155 | 8 | 12 | 260 | 83 | 332 | 5.09e-30 | 115 |
| MS.gene74445.t1 | AT1G54870 | 32.308 | 260 | 155 | 8 | 12 | 260 | 81 | 330 | 6.31e-30 | 115 |
| MS.gene74445.t1 | AT3G05260 | 30.502 | 259 | 162 | 7 | 12 | 261 | 36 | 285 | 1.76e-25 | 102 |
| MS.gene74445.t1 | AT5G18210 | 30.116 | 259 | 168 | 5 | 13 | 263 | 8 | 261 | 5.69e-25 | 100 |
| MS.gene74445.t1 | AT4G05530 | 31.873 | 251 | 162 | 6 | 12 | 261 | 8 | 250 | 7.02e-23 | 94.7 |
| MS.gene74445.t1 | AT3G04000 | 29.927 | 274 | 173 | 6 | 1 | 260 | 1 | 269 | 3.21e-22 | 93.2 |
| MS.gene74445.t1 | AT1G63380 | 28.352 | 261 | 165 | 8 | 13 | 260 | 15 | 266 | 8.07e-22 | 92.4 |
| MS.gene74445.t1 | AT1G63380 | 28.352 | 261 | 165 | 8 | 13 | 260 | 17 | 268 | 8.51e-22 | 92.0 |
| MS.gene74445.t1 | AT2G30670 | 30.315 | 254 | 163 | 8 | 13 | 261 | 7 | 251 | 9.05e-22 | 91.7 |
| MS.gene74445.t1 | AT1G63380 | 28.352 | 261 | 165 | 8 | 13 | 260 | 19 | 270 | 9.24e-22 | 92.0 |
| MS.gene74445.t1 | AT2G29340 | 31.890 | 254 | 159 | 8 | 13 | 261 | 7 | 251 | 1.13e-21 | 91.7 |
| MS.gene74445.t1 | AT1G63380 | 28.352 | 261 | 165 | 8 | 13 | 260 | 22 | 273 | 1.19e-21 | 92.0 |
| MS.gene74445.t1 | AT2G29350 | 31.179 | 263 | 156 | 8 | 8 | 260 | 10 | 257 | 1.60e-21 | 91.3 |
| MS.gene74445.t1 | AT2G29360 | 31.496 | 254 | 160 | 8 | 13 | 261 | 16 | 260 | 1.75e-21 | 91.3 |
| MS.gene74445.t1 | AT1G24360 | 27.863 | 262 | 162 | 9 | 12 | 262 | 73 | 318 | 2.17e-21 | 91.7 |
| MS.gene74445.t1 | AT2G29340 | 31.890 | 254 | 159 | 8 | 13 | 261 | 7 | 251 | 2.24e-21 | 91.7 |
| MS.gene74445.t1 | AT3G55290 | 27.692 | 260 | 167 | 7 | 13 | 260 | 17 | 267 | 3.82e-21 | 90.5 |
| MS.gene74445.t1 | AT3G55290 | 27.692 | 260 | 167 | 7 | 13 | 260 | 18 | 268 | 4.13e-21 | 90.5 |
| MS.gene74445.t1 | AT4G13180 | 28.839 | 267 | 178 | 6 | 1 | 261 | 1 | 261 | 4.75e-21 | 89.7 |
| MS.gene74445.t1 | AT1G62610 | 27.734 | 256 | 173 | 7 | 13 | 260 | 19 | 270 | 5.61e-21 | 90.1 |
| MS.gene74445.t1 | AT1G62610 | 27.734 | 256 | 173 | 7 | 13 | 260 | 14 | 265 | 5.74e-21 | 89.7 |
| MS.gene74445.t1 | AT1G62610 | 27.734 | 256 | 173 | 7 | 13 | 260 | 13 | 264 | 5.95e-21 | 89.7 |
| MS.gene74445.t1 | AT1G62610 | 27.734 | 256 | 173 | 7 | 13 | 260 | 15 | 266 | 6.66e-21 | 89.7 |
| MS.gene74445.t1 | AT5G18210 | 29.961 | 257 | 154 | 6 | 13 | 261 | 8 | 246 | 1.38e-20 | 89.0 |
| MS.gene74445.t1 | AT3G46170 | 26.437 | 261 | 171 | 7 | 12 | 260 | 25 | 276 | 1.73e-20 | 88.6 |
| MS.gene74445.t1 | AT1G07450 | 32.422 | 256 | 154 | 10 | 13 | 261 | 8 | 251 | 4.41e-20 | 87.0 |
| MS.gene74445.t1 | AT2G29370 | 29.762 | 252 | 167 | 7 | 13 | 261 | 16 | 260 | 1.16e-19 | 86.3 |
| MS.gene74445.t1 | AT2G29310 | 30.709 | 254 | 162 | 8 | 13 | 261 | 7 | 251 | 1.44e-19 | 85.9 |
| MS.gene74445.t1 | AT2G29150 | 31.621 | 253 | 158 | 9 | 13 | 260 | 16 | 258 | 1.96e-19 | 85.5 |
| MS.gene74445.t1 | AT3G55310 | 27.376 | 263 | 164 | 8 | 13 | 260 | 17 | 267 | 2.95e-19 | 85.1 |
| MS.gene74445.t1 | AT3G03980 | 27.941 | 272 | 169 | 6 | 7 | 261 | 8 | 269 | 3.39e-19 | 84.7 |
| MS.gene74445.t1 | AT5G06060 | 29.183 | 257 | 174 | 6 | 7 | 261 | 3 | 253 | 5.34e-19 | 84.3 |
| MS.gene74445.t1 | AT2G29290 | 30.556 | 252 | 165 | 7 | 13 | 261 | 7 | 251 | 8.42e-19 | 83.6 |
| MS.gene74445.t1 | AT2G29330 | 30.315 | 254 | 163 | 8 | 13 | 261 | 7 | 251 | 1.15e-18 | 83.2 |
| MS.gene74445.t1 | AT2G29260 | 28.968 | 252 | 171 | 6 | 13 | 262 | 68 | 313 | 7.61e-18 | 82.0 |
| MS.gene74445.t1 | AT2G29340 | 32.143 | 196 | 124 | 6 | 13 | 204 | 7 | 197 | 5.55e-17 | 77.4 |
| MS.gene74445.t1 | AT2G29340 | 32.143 | 196 | 124 | 6 | 13 | 204 | 7 | 197 | 5.55e-17 | 77.4 |
| MS.gene74445.t1 | AT1G07440 | 27.308 | 260 | 162 | 6 | 13 | 261 | 12 | 255 | 6.94e-17 | 78.6 |
| MS.gene74445.t1 | AT2G17845 | 27.068 | 266 | 170 | 8 | 10 | 260 | 44 | 300 | 1.84e-16 | 77.8 |
| MS.gene74445.t1 | AT2G29300 | 30.233 | 258 | 159 | 10 | 13 | 261 | 7 | 252 | 3.05e-16 | 76.6 |
| MS.gene74445.t1 | AT2G29300 | 30.651 | 261 | 154 | 10 | 13 | 261 | 7 | 252 | 4.22e-16 | 76.6 |
| MS.gene74445.t1 | AT2G29320 | 29.961 | 257 | 161 | 9 | 13 | 261 | 13 | 258 | 4.72e-16 | 76.3 |
| MS.gene74445.t1 | AT2G29350 | 31.000 | 200 | 131 | 5 | 8 | 204 | 10 | 205 | 9.63e-16 | 74.7 |
| MS.gene74445.t1 | AT2G29350 | 30.151 | 199 | 117 | 6 | 70 | 260 | 35 | 219 | 5.40e-14 | 69.7 |
| MS.gene74445.t1 | AT1G10310 | 27.638 | 199 | 141 | 3 | 13 | 211 | 15 | 210 | 1.71e-13 | 68.6 |
| MS.gene74445.t1 | AT2G29310 | 28.444 | 225 | 148 | 7 | 42 | 261 | 33 | 249 | 3.01e-13 | 68.2 |
| MS.gene74445.t1 | AT5G65205 | 28.495 | 186 | 125 | 4 | 17 | 201 | 10 | 188 | 3.31e-13 | 68.6 |
| MS.gene74445.t1 | AT5G10050 | 27.404 | 208 | 142 | 5 | 17 | 222 | 9 | 209 | 5.09e-13 | 67.8 |
| MS.gene74445.t1 | AT5G50600 | 25.743 | 202 | 142 | 5 | 6 | 204 | 38 | 234 | 1.82e-12 | 66.6 |
| MS.gene74445.t1 | AT5G50700 | 25.743 | 202 | 142 | 5 | 6 | 204 | 38 | 234 | 1.82e-12 | 66.6 |
| MS.gene74445.t1 | AT5G50690 | 27.528 | 178 | 118 | 5 | 12 | 184 | 44 | 215 | 6.51e-12 | 64.3 |
| MS.gene74445.t1 | AT5G50590 | 27.528 | 178 | 118 | 5 | 12 | 184 | 44 | 215 | 6.51e-12 | 64.3 |
| MS.gene74445.t1 | AT5G50690 | 27.528 | 178 | 118 | 5 | 12 | 184 | 44 | 215 | 1.42e-11 | 63.9 |
| MS.gene74445.t1 | AT5G50590 | 27.528 | 178 | 118 | 5 | 12 | 184 | 44 | 215 | 1.42e-11 | 63.9 |
| MS.gene74445.t1 | AT3G47350 | 23.350 | 197 | 139 | 5 | 13 | 204 | 44 | 233 | 3.75e-11 | 62.8 |
| MS.gene74445.t1 | AT2G29320 | 30.612 | 196 | 122 | 7 | 13 | 201 | 13 | 201 | 3.83e-11 | 61.6 |
| MS.gene74445.t1 | AT3G47350 | 23.350 | 197 | 139 | 5 | 13 | 204 | 44 | 233 | 4.62e-11 | 62.4 |
Find 73 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCAAATAAACGTTCAAAT+TGG | 0.189581 | 6.4:+160859 | None:intergenic |
| ATGTCAAAGCATGCAGTATT+GGG | 0.297452 | 6.4:-160702 | MS.gene74445:CDS |
| TGTTACTATGGCTACTTTGC+CGG | 0.317039 | 6.4:+161468 | None:intergenic |
| CAATCAACGGTCAAAACTTA+TGG | 0.317863 | 6.4:-161262 | MS.gene74445:CDS |
| ACTAGCACCTCCTGTTACTA+TGG | 0.326950 | 6.4:+161456 | None:intergenic |
| CTTAGAGTGGTGTTTGTAGA+TGG | 0.330725 | 6.4:+161496 | None:intergenic |
| ACAGCATCTGCCACATGTTT+AGG | 0.336258 | 6.4:+160510 | None:intergenic |
| CAGGGAGTGTTGGCGGTAGC+CGG | 0.347101 | 6.4:-160752 | MS.gene74445:CDS |
| AGGGAGTGTTGGCGGTAGCC+GGG | 0.360673 | 6.4:-160751 | MS.gene74445:CDS |
| AATGACGCTGAGTTTGTAAC+TGG | 0.376194 | 6.4:-160471 | MS.gene74445:CDS |
| CGCAAATAAACGTTCAAATT+GGG | 0.379030 | 6.4:+160860 | None:intergenic |
| AATGGATATAGGTGCACCTT+TGG | 0.380059 | 6.4:+161323 | None:intergenic |
| TTCCACAGCTCAAACAATAA+TGG | 0.397135 | 6.4:-160895 | MS.gene74445:CDS |
| ACCTTTGACTTGTAAGTTGT+TGG | 0.403736 | 6.4:-160601 | MS.gene74445:CDS |
| CAATGGTGGAGGGTCGCGTA+AGG | 0.405104 | 6.4:-160791 | MS.gene74445:CDS |
| GATATAATGTTCAGCAATGC+TGG | 0.417058 | 6.4:-160927 | MS.gene74445:CDS |
| GGCAAAGTAGCCATAGTAAC+AGG | 0.428498 | 6.4:-161466 | MS.gene74445:CDS |
| GGTGCACCTTTGGTTTCCTA+TGG | 0.430495 | 6.4:+161333 | None:intergenic |
| CCTTTGACTTGTAAGTTGTT+GGG | 0.436637 | 6.4:-160600 | MS.gene74445:CDS |
| TGTCACGTCACAATGGATAT+AGG | 0.440312 | 6.4:+161312 | None:intergenic |
| CCAATTTGAACGTTTATTTG+CGG | 0.445879 | 6.4:-160859 | MS.gene74445:CDS |
| GATGTCAAAGCATGCAGTAT+TGG | 0.449205 | 6.4:-160703 | MS.gene74445:CDS |
| AACACCACTCTAAGATTATC+CGG | 0.449574 | 6.4:-161487 | MS.gene74445:CDS |
| ATGGTGGAGGGTCGCGTAAG+GGG | 0.471677 | 6.4:-160789 | MS.gene74445:CDS |
| TGAACTCTGTCTCGCCGAAT+GGG | 0.471792 | 6.4:-160632 | MS.gene74445:CDS |
| AAAGGTGTTGCCAACCCATT+CGG | 0.472926 | 6.4:+160618 | None:intergenic |
| TTAGACATTTATTTATACCT+TGG | 0.476379 | 6.4:+160419 | None:intergenic |
| TTATTTGCGGTCAATGTTCG+TGG | 0.480166 | 6.4:-160846 | MS.gene74445:CDS |
| GCCGACATTCAAGACGAGCT+TGG | 0.482508 | 6.4:-161373 | MS.gene74445:CDS |
| CGCAGCACGTGCAATGGTGG+AGG | 0.489751 | 6.4:-160802 | MS.gene74445:CDS |
| TGCGGTCAATGTTCGTGGAA+TGG | 0.494100 | 6.4:-160841 | MS.gene74445:CDS |
| ATATGCAAGGCTTGAGGGAG+TGG | 0.495470 | 6.4:-160541 | MS.gene74445:CDS |
| TCCAAGCTCGTCTTGAATGT+CGG | 0.507217 | 6.4:+161372 | None:intergenic |
| TTCCATTATTGTTTGAGCTG+TGG | 0.509446 | 6.4:+160893 | None:intergenic |
| GTGAACTCTGTCTCGCCGAA+TGG | 0.516753 | 6.4:-160633 | MS.gene74445:CDS |
| CTCTGTCTCGCCGAATGGGT+TGG | 0.517791 | 6.4:-160628 | MS.gene74445:CDS |
| CTTGATCTTATTGTCGATGG+TGG | 0.522619 | 6.4:-160447 | MS.gene74445:CDS |
| AACGGTCAAAACTTATGGAC+AGG | 0.523815 | 6.4:-161257 | MS.gene74445:intron |
| GGGAGTGTTGGCGGTAGCCG+GGG | 0.526361 | 6.4:-160750 | MS.gene74445:CDS |
| AACCACACGCGTGCCTTCGT+TGG | 0.526476 | 6.4:+161402 | None:intergenic |
| AATGGTGGAGGGTCGCGTAA+GGG | 0.534993 | 6.4:-160790 | MS.gene74445:CDS |
| TGGTGGAGGGTCGCGTAAGG+GGG | 0.541859 | 6.4:-160788 | MS.gene74445:CDS |
| ACAGGAGGTGCTAGTGGCAT+AGG | 0.544600 | 6.4:-161448 | MS.gene74445:CDS |
| AGCTTGCAACTAGCCGCACA+CGG | 0.546786 | 6.4:-160663 | MS.gene74445:CDS |
| GTGTGCGGCTAGTTGCAAGC+TGG | 0.563469 | 6.4:+160665 | None:intergenic |
| GGTCTTGATCTTATTGTCGA+TGG | 0.563920 | 6.4:-160450 | MS.gene74445:CDS |
| CCGTTGACCTCGAGCCTCCC+CGG | 0.564604 | 6.4:+160733 | None:intergenic |
| AATCAAGTTGCTGAGTCCAT+AGG | 0.565673 | 6.4:-161349 | MS.gene74445:CDS |
| GCGGTAGCCGGGGAGGCTCG+AGG | 0.566952 | 6.4:-160740 | MS.gene74445:CDS |
| CCCAACAACTTACAAGTCAA+AGG | 0.568054 | 6.4:+160600 | None:intergenic |
| ACACGCAGCACGTGCAATGG+TGG | 0.568131 | 6.4:-160805 | MS.gene74445:CDS |
| CCGGGGAGGCTCGAGGTCAA+CGG | 0.568970 | 6.4:-160733 | MS.gene74445:CDS |
| AGTGTTGGCGGTAGCCGGGG+AGG | 0.573576 | 6.4:-160747 | MS.gene74445:CDS |
| TGTCGATGGTGGATTTGCCA+AGG | 0.575872 | 6.4:-160436 | MS.gene74445:CDS |
| GTGTGTACAGGGAGTGTTGG+CGG | 0.582142 | 6.4:-160759 | MS.gene74445:CDS |
| TGCCAACGAAGGCACGCGTG+TGG | 0.583845 | 6.4:-161404 | MS.gene74445:CDS |
| ATTGTGTGTACAGGGAGTGT+TGG | 0.612564 | 6.4:-160762 | MS.gene74445:CDS |
| CTTCGTCTGTCACGTCACAA+TGG | 0.614110 | 6.4:+161305 | None:intergenic |
| ATAGTAACAGGAGGTGCTAG+TGG | 0.618049 | 6.4:-161454 | MS.gene74445:CDS |
| GCTTGCAACTAGCCGCACAC+GGG | 0.620605 | 6.4:-160662 | MS.gene74445:CDS |
| TGTCAAAGCATGCAGTATTG+GGG | 0.628665 | 6.4:-160701 | MS.gene74445:CDS |
| GCAGCACGTGCAATGGTGGA+GGG | 0.637285 | 6.4:-160801 | MS.gene74445:CDS |
| GAAACACGCAGCACGTGCAA+TGG | 0.643149 | 6.4:-160808 | MS.gene74445:CDS |
| GCGCGTGTCTTTGCCAACGA+AGG | 0.647861 | 6.4:-161415 | MS.gene74445:CDS |
| GTTCACTCTTATCCCGTGTG+CGG | 0.649023 | 6.4:+160650 | None:intergenic |
| AGTATTGGGGCTAATGCGTG+CGG | 0.649064 | 6.4:-160688 | MS.gene74445:CDS |
| CTGAGTCCATAGGAAACCAA+AGG | 0.652106 | 6.4:-161339 | MS.gene74445:CDS |
| TTTGCCGGATAATCTTAGAG+TGG | 0.653414 | 6.4:+161483 | None:intergenic |
| TAGTGGCATAGGCGAAGCCA+CGG | 0.659171 | 6.4:-161437 | MS.gene74445:CDS |
| GTTGTTGGGAATGAGCAATG+AGG | 0.682181 | 6.4:-160586 | MS.gene74445:CDS |
| GGTGCTCACACCTAAACATG+TGG | 0.684800 | 6.4:-160520 | MS.gene74445:CDS |
| AAAGTAGCCATAGTAACAGG+AGG | 0.691613 | 6.4:-161463 | MS.gene74445:CDS |
| GTTGGCAAAGACACGCGCCG+TGG | 0.708932 | 6.4:+161420 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCATTTTTTTCATTAAATA+TGG | - | chr6.4:160843-160862 | MS.gene74445:CDS | 10.0% |
| !!! | TCATTTTTTTCATTAAATAT+GGG | - | chr6.4:160844-160863 | MS.gene74445:CDS | 10.0% |
| !! | AGAATTATAAAAAATATGCA+AGG | - | chr6.4:161385-161404 | MS.gene74445:CDS | 15.0% |
| !! | ATATGATTAATATTCTCATT+TGG | + | chr6.4:160878-160897 | None:intergenic | 15.0% |
| !!! | GTTCATTTATTTAATTGTTT+TGG | - | chr6.4:160785-160804 | MS.gene74445:CDS | 15.0% |
| !!! | TCTTATATTTTAGTATATAG+TGG | - | chr6.4:160928-160947 | MS.gene74445:CDS | 15.0% |
| ! | TAAAAATCTCGTTCAATCAA+CGG | - | chr6.4:160664-160683 | MS.gene74445:CDS | 25.0% |
| AAAAAATATGCAAGGCTTGA+GGG | - | chr6.4:161393-161412 | MS.gene74445:CDS | 30.0% | |
| CCAATTTGAACGTTTATTTG+CGG | - | chr6.4:161080-161099 | MS.gene74445:intron | 30.0% | |
| CGCAAATAAACGTTCAAATT+GGG | + | chr6.4:161082-161101 | None:intergenic | 30.0% | |
| GTTAAGAGAGAGTGATAAAT+AGG | + | chr6.4:160725-160744 | None:intergenic | 30.0% | |
| TAAAAAATATGCAAGGCTTG+AGG | - | chr6.4:161392-161411 | MS.gene74445:CDS | 30.0% | |
| ATGTCAAAGCATGCAGTATT+GGG | - | chr6.4:161237-161256 | MS.gene74445:intron | 35.0% | |
| CAATCAACGGTCAAAACTTA+TGG | - | chr6.4:160677-160696 | MS.gene74445:CDS | 35.0% | |
| CCGCAAATAAACGTTCAAAT+TGG | + | chr6.4:161083-161102 | None:intergenic | 35.0% | |
| GATATAATGTTCAGCAATGC+TGG | - | chr6.4:161012-161031 | MS.gene74445:intron | 35.0% | |
| TTCCACAGCTCAAACAATAA+TGG | - | chr6.4:161044-161063 | MS.gene74445:intron | 35.0% | |
| TTCCATTATTGTTTGAGCTG+TGG | + | chr6.4:161049-161068 | None:intergenic | 35.0% | |
| !! | AACACCACTCTAAGATTATC+CGG | - | chr6.4:160452-160471 | MS.gene74445:CDS | 35.0% |
| !! | ACCTTTGACTTGTAAGTTGT+TGG | - | chr6.4:161338-161357 | MS.gene74445:CDS | 35.0% |
| !! | CCTTTGACTTGTAAGTTGTT+GGG | - | chr6.4:161339-161358 | MS.gene74445:CDS | 35.0% |
| AAAGTAGCCATAGTAACAGG+AGG | - | chr6.4:160476-160495 | MS.gene74445:CDS | 40.0% | |
| AACGGTCAAAACTTATGGAC+AGG | - | chr6.4:160682-160701 | MS.gene74445:CDS | 40.0% | |
| AATGACGCTGAGTTTGTAAC+TGG | - | chr6.4:161468-161487 | MS.gene74445:CDS | 40.0% | |
| AATGGATATAGGTGCACCTT+TGG | + | chr6.4:160619-160638 | None:intergenic | 40.0% | |
| CCCAACAACTTACAAGTCAA+AGG | + | chr6.4:161342-161361 | None:intergenic | 40.0% | |
| CTTAGAGTGGTGTTTGTAGA+TGG | + | chr6.4:160446-160465 | None:intergenic | 40.0% | |
| CTTGATCTTATTGTCGATGG+TGG | - | chr6.4:161492-161511 | MS.gene74445:CDS | 40.0% | |
| GATGTCAAAGCATGCAGTAT+TGG | - | chr6.4:161236-161255 | MS.gene74445:intron | 40.0% | |
| GGTCTTGATCTTATTGTCGA+TGG | - | chr6.4:161489-161508 | MS.gene74445:CDS | 40.0% | |
| TGTCAAAGCATGCAGTATTG+GGG | - | chr6.4:161238-161257 | MS.gene74445:intron | 40.0% | |
| TGTCACGTCACAATGGATAT+AGG | + | chr6.4:160630-160649 | None:intergenic | 40.0% | |
| TTATTTGCGGTCAATGTTCG+TGG | - | chr6.4:161093-161112 | MS.gene74445:intron | 40.0% | |
| TTTGCCGGATAATCTTAGAG+TGG | + | chr6.4:160459-160478 | None:intergenic | 40.0% | |
| ! | AATCAAGTTGCTGAGTCCAT+AGG | - | chr6.4:160590-160609 | MS.gene74445:CDS | 40.0% |
| ! | TGTTACTATGGCTACTTTGC+CGG | + | chr6.4:160474-160493 | None:intergenic | 40.0% |
| ACAGCATCTGCCACATGTTT+AGG | + | chr6.4:161432-161451 | None:intergenic | 45.0% | |
| ACTAGCACCTCCTGTTACTA+TGG | + | chr6.4:160486-160505 | None:intergenic | 45.0% | |
| CTGAGTCCATAGGAAACCAA+AGG | - | chr6.4:160600-160619 | MS.gene74445:CDS | 45.0% | |
| GGCAAAGTAGCCATAGTAAC+AGG | - | chr6.4:160473-160492 | MS.gene74445:CDS | 45.0% | |
| GTTGTTGGGAATGAGCAATG+AGG | - | chr6.4:161353-161372 | MS.gene74445:CDS | 45.0% | |
| TCCAAGCTCGTCTTGAATGT+CGG | + | chr6.4:160570-160589 | None:intergenic | 45.0% | |
| ! | ATTGTGTGTACAGGGAGTGT+TGG | - | chr6.4:161177-161196 | MS.gene74445:intron | 45.0% |
| !! | AAAGGTGTTGCCAACCCATT+CGG | + | chr6.4:161324-161343 | None:intergenic | 45.0% |
| !! | ATAGTAACAGGAGGTGCTAG+TGG | - | chr6.4:160485-160504 | MS.gene74445:CDS | 45.0% |
| ATATGCAAGGCTTGAGGGAG+TGG | - | chr6.4:161398-161417 | MS.gene74445:CDS | 50.0% | |
| CTTCGTCTGTCACGTCACAA+TGG | + | chr6.4:160637-160656 | None:intergenic | 50.0% | |
| GGTGCTCACACCTAAACATG+TGG | - | chr6.4:161419-161438 | MS.gene74445:CDS | 50.0% | |
| GTTCACTCTTATCCCGTGTG+CGG | + | chr6.4:161292-161311 | None:intergenic | 50.0% | |
| TGAACTCTGTCTCGCCGAAT+GGG | - | chr6.4:161307-161326 | MS.gene74445:CDS | 50.0% | |
| TGCGGTCAATGTTCGTGGAA+TGG | - | chr6.4:161098-161117 | MS.gene74445:intron | 50.0% | |
| ! | AGTATTGGGGCTAATGCGTG+CGG | - | chr6.4:161251-161270 | MS.gene74445:intron | 50.0% |
| ! | GGTGCACCTTTGGTTTCCTA+TGG | + | chr6.4:160609-160628 | None:intergenic | 50.0% |
| !! | TGTCGATGGTGGATTTGCCA+AGG | - | chr6.4:161503-161522 | MS.gene74445:CDS | 50.0% |
| AGCTTGCAACTAGCCGCACA+CGG | - | chr6.4:161276-161295 | MS.gene74445:CDS | 55.0% | |
| GAAACACGCAGCACGTGCAA+TGG | - | chr6.4:161131-161150 | MS.gene74445:intron | 55.0% | |
| GCCGACATTCAAGACGAGCT+TGG | - | chr6.4:160566-160585 | MS.gene74445:CDS | 55.0% | |
| GTGAACTCTGTCTCGCCGAA+TGG | - | chr6.4:161306-161325 | MS.gene74445:CDS | 55.0% | |
| TAGTGGCATAGGCGAAGCCA+CGG | - | chr6.4:160502-160521 | MS.gene74445:CDS | 55.0% | |
| ! | AATGGTGGAGGGTCGCGTAA+GGG | - | chr6.4:161149-161168 | MS.gene74445:intron | 55.0% |
| !! | ACAGGAGGTGCTAGTGGCAT+AGG | - | chr6.4:160491-160510 | MS.gene74445:CDS | 55.0% |
| !! | AGGGGGAGCATTGTGTGTAC+AGG | - | chr6.4:161168-161187 | MS.gene74445:intron | 55.0% |
| !! | GGGGGAGCATTGTGTGTACA+GGG | - | chr6.4:161169-161188 | MS.gene74445:intron | 55.0% |
| !! | GTGTGTACAGGGAGTGTTGG+CGG | - | chr6.4:161180-161199 | MS.gene74445:intron | 55.0% |
| AACCACACGCGTGCCTTCGT+TGG | + | chr6.4:160540-160559 | None:intergenic | 60.0% | |
| ACACGCAGCACGTGCAATGG+TGG | - | chr6.4:161134-161153 | MS.gene74445:intron | 60.0% | |
| CTCTGTCTCGCCGAATGGGT+TGG | - | chr6.4:161311-161330 | MS.gene74445:CDS | 60.0% | |
| GCGCGTGTCTTTGCCAACGA+AGG | - | chr6.4:160524-160543 | MS.gene74445:CDS | 60.0% | |
| GCTTGCAACTAGCCGCACAC+GGG | - | chr6.4:161277-161296 | MS.gene74445:CDS | 60.0% | |
| ! | ATGGTGGAGGGTCGCGTAAG+GGG | - | chr6.4:161150-161169 | MS.gene74445:intron | 60.0% |
| ! | CAATGGTGGAGGGTCGCGTA+AGG | - | chr6.4:161148-161167 | MS.gene74445:intron | 60.0% |
| ! | GCAGCACGTGCAATGGTGGA+GGG | - | chr6.4:161138-161157 | MS.gene74445:intron | 60.0% |
| ! | GTGTGCGGCTAGTTGCAAGC+TGG | + | chr6.4:161277-161296 | None:intergenic | 60.0% |
| CGCAGCACGTGCAATGGTGG+AGG | - | chr6.4:161137-161156 | MS.gene74445:intron | 65.0% | |
| GTTGGCAAAGACACGCGCCG+TGG | + | chr6.4:160522-160541 | None:intergenic | 65.0% | |
| TGGTGGAGGGTCGCGTAAGG+GGG | - | chr6.4:161151-161170 | MS.gene74445:intron | 65.0% | |
| ! | TGCCAACGAAGGCACGCGTG+TGG | - | chr6.4:160535-160554 | MS.gene74445:CDS | 65.0% |
| !! | AGGGAGTGTTGGCGGTAGCC+GGG | - | chr6.4:161188-161207 | MS.gene74445:intron | 65.0% |
| !! | CAGGGAGTGTTGGCGGTAGC+CGG | - | chr6.4:161187-161206 | MS.gene74445:intron | 65.0% |
| CCGGGGAGGCTCGAGGTCAA+CGG | - | chr6.4:161206-161225 | MS.gene74445:intron | 70.0% | |
| CCGTTGACCTCGAGCCTCCC+CGG | + | chr6.4:161209-161228 | None:intergenic | 70.0% | |
| !! | AGTGTTGGCGGTAGCCGGGG+AGG | - | chr6.4:161192-161211 | MS.gene74445:intron | 70.0% |
| !! | GGGAGTGTTGGCGGTAGCCG+GGG | - | chr6.4:161189-161208 | MS.gene74445:intron | 70.0% |
| ! | GCGGTAGCCGGGGAGGCTCG+AGG | - | chr6.4:161199-161218 | MS.gene74445:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 160431 | 161530 | 160431 | ID=MS.gene74445 |
| chr6.4 | mRNA | 160431 | 161530 | 160431 | ID=MS.gene74445.t1;Parent=MS.gene74445 |
| chr6.4 | exon | 161258 | 161530 | 161258 | ID=MS.gene74445.t1.exon1;Parent=MS.gene74445.t1 |
| chr6.4 | CDS | 161258 | 161530 | 161258 | ID=cds.MS.gene74445.t1;Parent=MS.gene74445.t1 |
| chr6.4 | exon | 160431 | 160952 | 160431 | ID=MS.gene74445.t1.exon2;Parent=MS.gene74445.t1 |
| chr6.4 | CDS | 160431 | 160952 | 160431 | ID=cds.MS.gene74445.t1;Parent=MS.gene74445.t1 |
| Gene Sequence |
| Protein sequence |
