Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74775.t1 | XP_003621144.1 | 99.1 | 672 | 6 | 0 | 1 | 672 | 1 | 672 | 0.00E+00 | 1308.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74775.t1 | B9RUN8 | 80.2 | 678 | 123 | 4 | 1 | 672 | 1 | 673 | 6.7e-313 | 1074.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74775.t1 | G7KZV0 | 99.1 | 672 | 6 | 0 | 1 | 672 | 1 | 672 | 0.0e+00 | 1308.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene06250 | MS.gene74775 | PPI |
MS.gene74775 | MS.gene055526 | PPI |
MS.gene74775 | MS.gene013250 | PPI |
MS.gene40954 | MS.gene74775 | PPI |
MS.gene06336 | MS.gene74775 | PPI |
MS.gene049222 | MS.gene74775 | PPI |
MS.gene41663 | MS.gene74775 | PPI |
MS.gene013177 | MS.gene74775 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74775.t1 | MTR_7g009740 | 99.107 | 672 | 6 | 0 | 1 | 672 | 1 | 672 | 0.0 | 1375 |
MS.gene74775.t1 | MTR_3g097250 | 51.314 | 647 | 292 | 5 | 34 | 671 | 41 | 673 | 0.0 | 655 |
MS.gene74775.t1 | MTR_1g052535 | 25.763 | 590 | 344 | 21 | 7 | 554 | 15 | 552 | 1.94e-33 | 137 |
MS.gene74775.t1 | MTR_1g052535 | 31.746 | 315 | 169 | 10 | 7 | 293 | 15 | 311 | 3.29e-29 | 122 |
MS.gene74775.t1 | MTR_4g079360 | 31.518 | 257 | 134 | 4 | 64 | 296 | 54 | 292 | 3.30e-28 | 120 |
MS.gene74775.t1 | MTR_2g069320 | 41.139 | 158 | 85 | 4 | 54 | 208 | 10 | 162 | 2.02e-25 | 112 |
MS.gene74775.t1 | MTR_2g069050 | 41.667 | 144 | 82 | 2 | 67 | 208 | 19 | 162 | 3.11e-24 | 108 |
MS.gene74775.t1 | MTR_2g069310 | 41.667 | 144 | 82 | 2 | 67 | 208 | 19 | 162 | 8.49e-24 | 107 |
MS.gene74775.t1 | MTR_1g048000 | 40.972 | 144 | 83 | 2 | 67 | 208 | 19 | 162 | 2.00e-23 | 106 |
MS.gene74775.t1 | MTR_7g044770 | 36.145 | 166 | 81 | 3 | 65 | 222 | 60 | 208 | 3.51e-22 | 102 |
MS.gene74775.t1 | MTR_4g119340 | 37.241 | 145 | 73 | 3 | 67 | 208 | 14 | 143 | 1.22e-19 | 94.4 |
MS.gene74775.t1 | MTR_4g116430 | 32.886 | 149 | 86 | 2 | 64 | 208 | 136 | 274 | 5.76e-17 | 85.9 |
MS.gene74775.t1 | MTR_2g020660 | 36.747 | 166 | 80 | 5 | 65 | 222 | 53 | 201 | 9.37e-17 | 84.7 |
MS.gene74775.t1 | MTR_4g101750 | 31.285 | 179 | 98 | 4 | 38 | 212 | 68 | 225 | 6.02e-15 | 79.0 |
MS.gene74775.t1 | MTR_4g101750 | 31.285 | 179 | 98 | 4 | 38 | 212 | 68 | 225 | 8.44e-15 | 78.6 |
MS.gene74775.t1 | MTR_2g064840 | 25.547 | 274 | 164 | 7 | 47 | 311 | 480 | 722 | 1.93e-11 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74775.t1 | AT5G39900 | 77.596 | 674 | 138 | 6 | 1 | 672 | 1 | 663 | 0.0 | 1060 |
MS.gene74775.t1 | AT5G08650 | 51.387 | 613 | 284 | 4 | 59 | 671 | 78 | 676 | 0.0 | 620 |
MS.gene74775.t1 | AT5G08650 | 49.088 | 548 | 265 | 4 | 59 | 606 | 78 | 611 | 0.0 | 536 |
MS.gene74775.t1 | AT5G13650 | 26.439 | 556 | 323 | 21 | 34 | 554 | 49 | 553 | 2.62e-37 | 148 |
MS.gene74775.t1 | AT5G13650 | 26.923 | 520 | 299 | 19 | 67 | 554 | 82 | 552 | 3.34e-37 | 148 |
MS.gene74775.t1 | AT2G31060 | 26.139 | 505 | 292 | 13 | 60 | 528 | 52 | 511 | 1.37e-30 | 128 |
MS.gene74775.t1 | AT2G31060 | 26.139 | 505 | 296 | 14 | 60 | 528 | 52 | 515 | 4.31e-29 | 123 |
MS.gene74775.t1 | AT1G56070 | 41.667 | 144 | 82 | 2 | 67 | 208 | 19 | 162 | 1.54e-23 | 106 |
MS.gene74775.t1 | AT1G56070 | 41.667 | 144 | 82 | 2 | 67 | 208 | 19 | 162 | 1.54e-23 | 106 |
MS.gene74775.t1 | AT1G56070 | 41.667 | 144 | 82 | 2 | 67 | 208 | 19 | 162 | 1.54e-23 | 106 |
MS.gene74775.t1 | AT3G12915 | 40.972 | 144 | 83 | 2 | 67 | 208 | 19 | 162 | 5.95e-23 | 104 |
MS.gene74775.t1 | AT3G22980 | 40.000 | 145 | 69 | 2 | 67 | 208 | 9 | 138 | 2.91e-21 | 99.8 |
MS.gene74775.t1 | AT3G22980 | 40.000 | 145 | 69 | 2 | 67 | 208 | 9 | 138 | 2.91e-21 | 99.8 |
MS.gene74775.t1 | AT3G22980 | 40.000 | 145 | 69 | 2 | 67 | 208 | 9 | 138 | 2.91e-21 | 99.8 |
MS.gene74775.t1 | AT1G06220 | 37.584 | 149 | 79 | 3 | 64 | 208 | 135 | 273 | 3.52e-20 | 96.3 |
MS.gene74775.t1 | AT1G06220 | 37.584 | 149 | 79 | 3 | 64 | 208 | 135 | 273 | 3.52e-20 | 96.3 |
MS.gene74775.t1 | AT1G06220 | 37.584 | 149 | 79 | 3 | 64 | 208 | 135 | 273 | 3.52e-20 | 96.3 |
MS.gene74775.t1 | AT1G45332 | 34.146 | 164 | 83 | 3 | 67 | 222 | 65 | 211 | 6.01e-20 | 95.1 |
MS.gene74775.t1 | AT2G45030 | 34.146 | 164 | 83 | 3 | 67 | 222 | 65 | 211 | 6.56e-20 | 95.1 |
MS.gene74775.t1 | AT5G25230 | 36.242 | 149 | 81 | 3 | 64 | 208 | 121 | 259 | 1.10e-18 | 91.3 |
MS.gene74775.t1 | AT5G25230 | 36.242 | 149 | 81 | 3 | 64 | 208 | 121 | 259 | 1.10e-18 | 91.3 |
MS.gene74775.t1 | AT1G62750 | 32.886 | 149 | 80 | 3 | 68 | 212 | 97 | 229 | 6.74e-14 | 75.9 |
MS.gene74775.t1 | AT4G11160 | 26.070 | 257 | 148 | 6 | 47 | 296 | 206 | 427 | 2.90e-13 | 73.6 |
MS.gene74775.t1 | AT4G11160 | 26.070 | 257 | 148 | 6 | 47 | 296 | 204 | 425 | 3.10e-13 | 73.6 |
MS.gene74775.t1 | AT4G11160 | 26.070 | 257 | 148 | 6 | 47 | 296 | 206 | 427 | 3.23e-13 | 73.2 |
Find 152 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACTCTTGCTGATCGGTTAT+TGG | 0.191782 | 7.1:+85846689 | MS.gene74775:CDS |
GCTGACCCCGACCGTGTTAA+AGG | 0.223715 | 7.1:+85849416 | MS.gene74775:CDS |
CCTACTGGAATCTTGTTTAC+TGG | 0.242995 | 7.1:+85849740 | MS.gene74775:CDS |
ATCTCCAATGCGTGCCTCTT+TGG | 0.244319 | 7.1:-85849798 | None:intergenic |
ATCTATAATGGCTTTCTCTT+TGG | 0.258630 | 7.1:-85846598 | None:intergenic |
CTTTCTCTTTGGTGTTGTTT+TGG | 0.269768 | 7.1:-85846587 | None:intergenic |
TTCTATAAGAATGTCATAAA+TGG | 0.270398 | 7.1:+85849158 | MS.gene74775:CDS |
GTGGATGTGGAACCTCTTCC+AGG | 0.291417 | 7.1:+85849845 | MS.gene74775:CDS |
TTCCACATCCACGGTGCTTT+TGG | 0.302252 | 7.1:-85849834 | None:intergenic |
TGCTTGTCAGGGTGTGCTTT+TGG | 0.305127 | 7.1:+85849283 | MS.gene74775:CDS |
TTGCTAACATCGGCTAAAAC+TGG | 0.312340 | 7.1:+85849479 | MS.gene74775:CDS |
TACACGAAAGAAGAAGCTTT+TGG | 0.312536 | 7.1:+85855052 | MS.gene74775:CDS |
CTGCCCTAGGTCTAGGGTTC+AGG | 0.324685 | 7.1:+85850625 | MS.gene74775:CDS |
CTACATCTATTGCAGTATTA+CGG | 0.327928 | 7.1:+85854986 | MS.gene74775:intron |
CTCTTTGGTTGTCCGCATTC+CGG | 0.332074 | 7.1:-85849783 | None:intergenic |
ACGAAACCTTCAATAGTTCA+TGG | 0.338666 | 7.1:-85855142 | None:intergenic |
AAGGTCACTAGCTGCTTGTC+AGG | 0.342932 | 7.1:+85849271 | MS.gene74775:CDS |
TCAGTATCTTGATAAATTGC+AGG | 0.349168 | 7.1:+85846749 | MS.gene74775:CDS |
TCGGAATACTCATAGATATA+AGG | 0.362737 | 7.1:-85851759 | None:intergenic |
TGCCATGTTGCTGTCGTTGA+TGG | 0.371153 | 7.1:+85849626 | MS.gene74775:CDS |
CTATGCATCATTTGATTATG+AGG | 0.373945 | 7.1:+85853518 | MS.gene74775:CDS |
CATCCTGAACTTACGCCTAC+TGG | 0.374824 | 7.1:+85849725 | MS.gene74775:CDS |
TGTTTGTGTAAACAGGAATA+TGG | 0.376872 | 7.1:+85851705 | MS.gene74775:intron |
TGGGTTATTCTACTTGATAA+AGG | 0.383459 | 7.1:-85846519 | None:intergenic |
GGGTTATTCTACTTGATAAA+GGG | 0.385895 | 7.1:-85846518 | None:intergenic |
TGGAGTACTCGTTCATTGAT+AGG | 0.386699 | 7.1:+85852105 | MS.gene74775:CDS |
GAGCGTATACCTCCGCCTCC+TGG | 0.396452 | 7.1:+85849536 | MS.gene74775:CDS |
GATCAAACATCGATTTCAAT+TGG | 0.397668 | 7.1:-85849439 | None:intergenic |
ACTAGCACTGCCCTAGGTCT+AGG | 0.398375 | 7.1:+85850618 | MS.gene74775:CDS |
TCATATGAAGCTATGGATAT+AGG | 0.398593 | 7.1:+85849695 | MS.gene74775:CDS |
GAGAAATTTCTCACAAGCTC+TGG | 0.408314 | 7.1:-85846636 | None:intergenic |
AGCATTCCATGAACTATTGA+AGG | 0.411225 | 7.1:+85855136 | MS.gene74775:CDS |
CAAGTTGGTTACGTTATAAC+CGG | 0.412569 | 7.1:+85849764 | MS.gene74775:CDS |
TGTCTTAGGTGGAGAGAGAA+AGG | 0.419115 | 7.1:+85849102 | MS.gene74775:intron |
CTTCAAAGCAGCAAAACATA+TGG | 0.421700 | 7.1:+85850491 | MS.gene74775:CDS |
AATTGGCCTTTAACACGGTC+GGG | 0.423358 | 7.1:-85849422 | None:intergenic |
CACCCTTCTCTCTGAGCGTA+GGG | 0.424744 | 7.1:+85852073 | MS.gene74775:CDS |
TGATCGGTTATTGGAACTTA+CGG | 0.425650 | 7.1:+85846698 | MS.gene74775:CDS |
CAGGCTACCACTCGTTGCTT+GGG | 0.430966 | 7.1:-85851900 | None:intergenic |
ACAGGCTACCACTCGTTGCT+TGG | 0.433082 | 7.1:-85851901 | None:intergenic |
AAACTTGATATTCTCTTGAA+TGG | 0.433950 | 7.1:+85854332 | MS.gene74775:CDS |
GTACTGACTCAAATCTATAA+TGG | 0.434180 | 7.1:-85846610 | None:intergenic |
AATGGTGATGATTCTAAAGA+TGG | 0.436992 | 7.1:+85849176 | MS.gene74775:CDS |
TGCTAACATCGGCTAAAACT+GGG | 0.444983 | 7.1:+85849480 | MS.gene74775:CDS |
ACAGAAAAGTGCACGTGTAA+TGG | 0.445676 | 7.1:-85846553 | None:intergenic |
GCAACGAGTGGTAGCCTGTT+GGG | 0.445716 | 7.1:+85851905 | MS.gene74775:CDS |
GTGTAATGGAAAATCTTTGA+TGG | 0.449154 | 7.1:-85846539 | None:intergenic |
GATCGGTTATTGGAACTTAC+GGG | 0.450204 | 7.1:+85846699 | MS.gene74775:CDS |
TCAGAGAGAAGGGTGATAAC+AGG | 0.457080 | 7.1:-85852065 | None:intergenic |
TAAGATTTCTTCGGCGGCCA+CGG | 0.457579 | 7.1:+85849667 | MS.gene74775:CDS |
ATCATTGCACATGTTGATCA+TGG | 0.464136 | 7.1:+85846660 | MS.gene74775:CDS |
CGTTGATGGTGCCCTGCGCA+AGG | 0.466416 | 7.1:+85849640 | MS.gene74775:CDS |
GTCTTAGGTGGAGAGAGAAA+GGG | 0.466839 | 7.1:+85849103 | MS.gene74775:intron |
TTACTCACTAGGCATAACTA+TGG | 0.469177 | 7.1:-85851946 | None:intergenic |
TATTACTGTGGGTTCCCAAC+AGG | 0.471236 | 7.1:-85851919 | None:intergenic |
TTGATGGTGCCCTGCGCAAG+GGG | 0.472833 | 7.1:+85849642 | MS.gene74775:CDS |
AATTGCTAAGTTAGATTCAA+AGG | 0.477085 | 7.1:-85849360 | None:intergenic |
TGATCTATCTTATTTATGAC+AGG | 0.477963 | 7.1:-85849386 | None:intergenic |
TTGGTTGTTGATGCTGCTCA+AGG | 0.478306 | 7.1:+85849302 | MS.gene74775:CDS |
AAGATTTCTTCGGCGGCCAC+GGG | 0.480686 | 7.1:+85849668 | MS.gene74775:CDS |
CAGTTATCAACCATCTGATC+TGG | 0.482709 | 7.1:+85854307 | MS.gene74775:intron |
ATATCGTGTTGGGCGTGAAT+TGG | 0.484300 | 7.1:+85854400 | MS.gene74775:CDS |
GGATTAGACGGTAATGCAGC+AGG | 0.489291 | 7.1:-85851879 | None:intergenic |
ACTCGAAATCATATCGTGTT+GGG | 0.489815 | 7.1:+85854390 | MS.gene74775:CDS |
TACCAAAAGCACCGTGGATG+TGG | 0.489918 | 7.1:+85849832 | MS.gene74775:CDS |
TTGTTTGATCTAAGGTATGT+TGG | 0.494037 | 7.1:+85852041 | MS.gene74775:intron |
ATCTTGTTTACTGGACAAGT+TGG | 0.500611 | 7.1:+85849749 | MS.gene74775:CDS |
AATGTTCTTGCCAAGTGTTA+CGG | 0.504696 | 7.1:+85855020 | MS.gene74775:CDS |
GGTATACGCTCTATAACTGC+TGG | 0.507876 | 7.1:-85849524 | None:intergenic |
GGCACTATTAAGAAAGGACT+TGG | 0.508945 | 7.1:+85846720 | MS.gene74775:CDS |
ATTCCAGTAGGCGTAAGTTC+AGG | 0.509737 | 7.1:-85849728 | None:intergenic |
TCAAAATCAGATCCATCGGC+TGG | 0.512704 | 7.1:-85850531 | None:intergenic |
TAATCATACAAGCCGCCATT+GGG | 0.514147 | 7.1:+85854559 | MS.gene74775:CDS |
AACTCGAAATCATATCGTGT+TGG | 0.515260 | 7.1:+85854389 | MS.gene74775:CDS |
CAATTGGCCTTTAACACGGT+CGG | 0.517416 | 7.1:-85849423 | None:intergenic |
TCACCCTTCTCTCTGAGCGT+AGG | 0.518017 | 7.1:+85852072 | MS.gene74775:CDS |
AGCGTATACCTCCGCCTCCT+GGG | 0.519604 | 7.1:+85849537 | MS.gene74775:CDS |
TCTTAGGTGGAGAGAGAAAG+GGG | 0.520345 | 7.1:+85849104 | MS.gene74775:intron |
TTGAATCTTATTGATACACC+TGG | 0.526485 | 7.1:+85849221 | MS.gene74775:CDS |
GGGTAAATCATATGAAGCTA+TGG | 0.531790 | 7.1:+85849688 | MS.gene74775:CDS |
TCACTCTTCCCAGGAGGCGG+AGG | 0.532337 | 7.1:-85849545 | None:intergenic |
AAATTTCTCACAAGCTCTGG+TGG | 0.532728 | 7.1:-85846633 | None:intergenic |
AACTATGGTAGCTATTACTG+TGG | 0.534879 | 7.1:-85851931 | None:intergenic |
AATTGAAGAAAGTCATAGAC+AGG | 0.535063 | 7.1:+85854429 | MS.gene74775:CDS |
TCGTGTTGGGCGTGAATTGG+TGG | 0.536800 | 7.1:+85854403 | MS.gene74775:CDS |
CACCCCTACGCTCAGAGAGA+AGG | 0.539680 | 7.1:-85852076 | None:intergenic |
TTCTTTAGTGACAGAGACAC+TGG | 0.539691 | 7.1:-85850595 | None:intergenic |
TGTAATGGAAAATCTTTGAT+GGG | 0.540161 | 7.1:-85846538 | None:intergenic |
GATTCACTCTTCCCAGGAGG+CGG | 0.540294 | 7.1:-85849548 | None:intergenic |
TCAATAACAATTTCTCTCAA+AGG | 0.540781 | 7.1:-85853462 | None:intergenic |
TGCTTCAAAATCAGATCCAT+CGG | 0.542024 | 7.1:-85850535 | None:intergenic |
TTTGTTAATCTACCTTCCAT+CGG | 0.542249 | 7.1:-85851778 | None:intergenic |
GATGTTAGCAATGCATCACT+CGG | 0.543356 | 7.1:-85849467 | None:intergenic |
ATTTCAATTGGCCTTTAACA+CGG | 0.543668 | 7.1:-85849427 | None:intergenic |
CTAGCACTGCCCTAGGTCTA+GGG | 0.546049 | 7.1:+85850619 | MS.gene74775:CDS |
TGAGCGTAGGGGTGAACAGT+TGG | 0.547250 | 7.1:+85852085 | MS.gene74775:CDS |
GTTGATGGTGCCCTGCGCAA+GGG | 0.550686 | 7.1:+85849641 | MS.gene74775:CDS |
CTTACGGGCACTATTAAGAA+AGG | 0.551233 | 7.1:+85846714 | MS.gene74775:CDS |
TCAAGTTTCACCAGATCAGA+TGG | 0.552288 | 7.1:-85854317 | None:intergenic |
ATAATCATACAAGCCGCCAT+TGG | 0.562406 | 7.1:+85854558 | MS.gene74775:CDS |
ATGTAAGCTTCTCTATTGCA+TGG | 0.563360 | 7.1:-85850563 | None:intergenic |
TAACTGAAATCTACATGCCC+AGG | 0.564247 | 7.1:-85849239 | None:intergenic |
AATATCACCACCGTAACACT+TGG | 0.564700 | 7.1:-85855030 | None:intergenic |
AAAGAAACTAGCACTGCCCT+AGG | 0.567143 | 7.1:+85850612 | MS.gene74775:CDS |
TATATCTATGAGTATTCCGA+TGG | 0.567155 | 7.1:+85851762 | MS.gene74775:CDS |
ACAACCAAAGAGGCACGCAT+TGG | 0.568702 | 7.1:+85849794 | MS.gene74775:CDS |
ACACGGTCGGGGTCAGCAGT+CGG | 0.572551 | 7.1:-85849410 | None:intergenic |
ACCCCTACGCTCAGAGAGAA+GGG | 0.575490 | 7.1:-85852075 | None:intergenic |
CAGACCTGAACCCTAGACCT+AGG | 0.576293 | 7.1:-85850629 | None:intergenic |
TGATTTCGAGTTATGAACAA+TGG | 0.578989 | 7.1:-85854378 | None:intergenic |
ATCACCGCTTTACCTGGAAG+AGG | 0.580633 | 7.1:-85849857 | None:intergenic |
CCAGTAAACAAGATTCCAGT+AGG | 0.583432 | 7.1:-85849740 | None:intergenic |
TGATGATTCTAAAGATGGAA+AGG | 0.585256 | 7.1:+85849181 | MS.gene74775:CDS |
GAATTGAAGAGTATAACATC+AGG | 0.586284 | 7.1:+85853495 | MS.gene74775:CDS |
TGTGCAAGAGCTTACTCACT+AGG | 0.587619 | 7.1:-85851957 | None:intergenic |
AAAGAAGATTCACTCTTCCC+AGG | 0.588401 | 7.1:-85849554 | None:intergenic |
ACATCGGCTAAAACTGGGGT+GGG | 0.588454 | 7.1:+85849485 | MS.gene74775:CDS |
ACTCGTTGCTTGGGATTAGA+CGG | 0.592284 | 7.1:-85851891 | None:intergenic |
CTAAGTTAGATTCAAAGGCA+AGG | 0.592310 | 7.1:-85849355 | None:intergenic |
AGCAACGAGTGGTAGCCTGT+TGG | 0.593264 | 7.1:+85851904 | MS.gene74775:CDS |
GATATAAGGCACGGTAGGAA+CGG | 0.596165 | 7.1:-85851745 | None:intergenic |
AACATCGGCTAAAACTGGGG+TGG | 0.597452 | 7.1:+85849484 | MS.gene74775:CDS |
AGGTCACTAGCTGCTTGTCA+GGG | 0.604109 | 7.1:+85849272 | MS.gene74775:CDS |
ATTTCAGTTATGAAGTGTCA+AGG | 0.604176 | 7.1:+85849252 | MS.gene74775:CDS |
ATTGGCCTTTAACACGGTCG+GGG | 0.606917 | 7.1:-85849421 | None:intergenic |
TCATAGATATAAGGCACGGT+AGG | 0.607140 | 7.1:-85851750 | None:intergenic |
AGACCTGAACCCTAGACCTA+GGG | 0.607528 | 7.1:-85850628 | None:intergenic |
GAAAATCTACTCTTGCTGAT+CGG | 0.612484 | 7.1:+85846682 | MS.gene74775:CDS |
TGGAAGAGGTTCCACATCCA+CGG | 0.617802 | 7.1:-85849843 | None:intergenic |
TCTATGAGTATTCCGATGGA+AGG | 0.618329 | 7.1:+85851766 | MS.gene74775:CDS |
GCTAACATCGGCTAAAACTG+GGG | 0.618963 | 7.1:+85849481 | MS.gene74775:CDS |
CACCATCAACGACAGCAACA+TGG | 0.620893 | 7.1:-85849628 | None:intergenic |
TCTCTTGAATGGTCAAGCAG+TGG | 0.623026 | 7.1:+85854343 | MS.gene74775:CDS |
AGTTCATGGAATGCTTCTTG+TGG | 0.623041 | 7.1:-85855128 | None:intergenic |
TGAATCTTATTGATACACCT+GGG | 0.632604 | 7.1:+85849222 | MS.gene74775:CDS |
AATTTCTCACAAGCTCTGGT+GGG | 0.640012 | 7.1:-85846632 | None:intergenic |
TGCAATTTATCAAGATACTG+AGG | 0.641130 | 7.1:-85846747 | None:intergenic |
CGGAATGCGGACAACCAAAG+AGG | 0.645056 | 7.1:+85849784 | MS.gene74775:CDS |
TGGTCAAGCAGTGGATGCAA+TGG | 0.648929 | 7.1:+85854352 | MS.gene74775:CDS |
AGCTTCATATGATTTACCCG+TGG | 0.651701 | 7.1:-85849684 | None:intergenic |
TGATGGTGCCCTGCGCAAGG+GGG | 0.653669 | 7.1:+85849643 | MS.gene74775:CDS |
GTCTAATCCCAAGCAACGAG+TGG | 0.653785 | 7.1:+85851893 | MS.gene74775:CDS |
ATGTTAGCAATGCATCACTC+GGG | 0.657087 | 7.1:-85849466 | None:intergenic |
ACTATGGTAGCTATTACTGT+GGG | 0.660198 | 7.1:-85851930 | None:intergenic |
ACCCTTCTCTCTGAGCGTAG+GGG | 0.674829 | 7.1:+85852074 | MS.gene74775:CDS |
GTTACGTTATAACCGGAATG+CGG | 0.676457 | 7.1:+85849771 | MS.gene74775:CDS |
GCACTATTAAGAAAGGACTT+GGG | 0.682333 | 7.1:+85846721 | MS.gene74775:CDS |
GAGTGATGCATTGCTAACAT+CGG | 0.698424 | 7.1:+85849469 | MS.gene74775:CDS |
ATACTCATAGATATAAGGCA+CGG | 0.704357 | 7.1:-85851754 | None:intergenic |
GAAGATTCACTCTTCCCAGG+AGG | 0.718205 | 7.1:-85849551 | None:intergenic |
GTTCTTGCCAAGTGTTACGG+TGG | 0.722489 | 7.1:+85855023 | MS.gene74775:CDS |
TTACCATACCAAAAGCACCG+TGG | 0.788637 | 7.1:+85849826 | MS.gene74775:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 85846447 | 85855166 | 85846447 | ID=MS.gene74775 |
chr7.1 | mRNA | 85846447 | 85855166 | 85846447 | ID=MS.gene74775.t1;Parent=MS.gene74775 |
chr7.1 | exon | 85846447 | 85846770 | 85846447 | ID=MS.gene74775.t1.exon1;Parent=MS.gene74775.t1 |
chr7.1 | CDS | 85846447 | 85846770 | 85846447 | ID=cds.MS.gene74775.t1;Parent=MS.gene74775.t1 |
chr7.1 | exon | 85849110 | 85849866 | 85849110 | ID=MS.gene74775.t1.exon2;Parent=MS.gene74775.t1 |
chr7.1 | CDS | 85849110 | 85849866 | 85849110 | ID=cds.MS.gene74775.t1;Parent=MS.gene74775.t1 |
chr7.1 | exon | 85850490 | 85850646 | 85850490 | ID=MS.gene74775.t1.exon3;Parent=MS.gene74775.t1 |
chr7.1 | CDS | 85850490 | 85850646 | 85850490 | ID=cds.MS.gene74775.t1;Parent=MS.gene74775.t1 |
chr7.1 | exon | 85850761 | 85850815 | 85850761 | ID=MS.gene74775.t1.exon4;Parent=MS.gene74775.t1 |
chr7.1 | CDS | 85850761 | 85850815 | 85850761 | ID=cds.MS.gene74775.t1;Parent=MS.gene74775.t1 |
chr7.1 | exon | 85851720 | 85851787 | 85851720 | ID=MS.gene74775.t1.exon5;Parent=MS.gene74775.t1 |
chr7.1 | CDS | 85851720 | 85851787 | 85851720 | ID=cds.MS.gene74775.t1;Parent=MS.gene74775.t1 |
chr7.1 | exon | 85851860 | 85851964 | 85851860 | ID=MS.gene74775.t1.exon6;Parent=MS.gene74775.t1 |
chr7.1 | CDS | 85851860 | 85851964 | 85851860 | ID=cds.MS.gene74775.t1;Parent=MS.gene74775.t1 |
chr7.1 | exon | 85852055 | 85852126 | 85852055 | ID=MS.gene74775.t1.exon7;Parent=MS.gene74775.t1 |
chr7.1 | CDS | 85852055 | 85852126 | 85852055 | ID=cds.MS.gene74775.t1;Parent=MS.gene74775.t1 |
chr7.1 | exon | 85853434 | 85853547 | 85853434 | ID=MS.gene74775.t1.exon8;Parent=MS.gene74775.t1 |
chr7.1 | CDS | 85853434 | 85853547 | 85853434 | ID=cds.MS.gene74775.t1;Parent=MS.gene74775.t1 |
chr7.1 | exon | 85854310 | 85854450 | 85854310 | ID=MS.gene74775.t1.exon9;Parent=MS.gene74775.t1 |
chr7.1 | CDS | 85854310 | 85854450 | 85854310 | ID=cds.MS.gene74775.t1;Parent=MS.gene74775.t1 |
chr7.1 | exon | 85854545 | 85854604 | 85854545 | ID=MS.gene74775.t1.exon10;Parent=MS.gene74775.t1 |
chr7.1 | CDS | 85854545 | 85854604 | 85854545 | ID=cds.MS.gene74775.t1;Parent=MS.gene74775.t1 |
chr7.1 | exon | 85855001 | 85855166 | 85855001 | ID=MS.gene74775.t1.exon11;Parent=MS.gene74775.t1 |
chr7.1 | CDS | 85855001 | 85855166 | 85855001 | ID=cds.MS.gene74775.t1;Parent=MS.gene74775.t1 |
Gene Sequence |
Protein sequence |