Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75439.t1 | XP_003602020.1 | 99.7 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 9.50E-190 | 672.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75439.t1 | G7J4E8 | 99.7 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 6.9e-190 | 672.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049236 | MS.gene75439 | 0.826055 | 3.35E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene75439 | -0.814469 | 1.52E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene75439 | -0.804444 | 2.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75439.t1 | MTR_3g087920 | 99.692 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 0.0 | 665 |
| MS.gene75439.t1 | MTR_4g113520 | 37.609 | 343 | 149 | 10 | 4 | 325 | 14 | 312 | 2.44e-63 | 203 |
| MS.gene75439.t1 | MTR_2g105850 | 47.222 | 144 | 73 | 1 | 31 | 174 | 54 | 194 | 2.53e-37 | 134 |
| MS.gene75439.t1 | MTR_3g013530 | 55.769 | 104 | 17 | 1 | 43 | 146 | 134 | 208 | 2.08e-24 | 100 |
| MS.gene75439.t1 | MTR_2g105850 | 66.667 | 42 | 14 | 0 | 31 | 72 | 54 | 95 | 2.80e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75439.t1 | AT2G22120 | 85.583 | 326 | 44 | 2 | 1 | 325 | 1 | 324 | 0.0 | 564 |
| MS.gene75439.t1 | AT2G22120 | 85.583 | 326 | 44 | 2 | 1 | 325 | 1 | 324 | 0.0 | 561 |
| MS.gene75439.t1 | AT1G11020 | 41.401 | 314 | 127 | 10 | 25 | 325 | 52 | 321 | 7.08e-62 | 200 |
| MS.gene75439.t1 | AT1G50440 | 48.936 | 141 | 66 | 3 | 32 | 169 | 60 | 197 | 3.57e-39 | 138 |
| MS.gene75439.t1 | AT1G50440 | 48.252 | 143 | 71 | 1 | 32 | 174 | 60 | 199 | 9.90e-39 | 137 |
| MS.gene75439.t1 | AT1G50440 | 48.252 | 143 | 71 | 1 | 32 | 174 | 60 | 199 | 1.70e-38 | 137 |
| MS.gene75439.t1 | AT1G50440 | 41.667 | 84 | 37 | 2 | 241 | 324 | 178 | 249 | 2.32e-11 | 63.5 |
| MS.gene75439.t1 | AT1G50440 | 48.252 | 143 | 71 | 1 | 32 | 174 | 60 | 199 | 1.70e-38 | 137 |
| MS.gene75439.t1 | AT1G50440 | 41.667 | 84 | 37 | 2 | 241 | 324 | 178 | 249 | 2.32e-11 | 63.5 |
| MS.gene75439.t1 | AT1G50440 | 48.252 | 143 | 71 | 1 | 32 | 174 | 60 | 199 | 1.70e-38 | 137 |
| MS.gene75439.t1 | AT1G50440 | 41.667 | 84 | 37 | 2 | 241 | 324 | 178 | 249 | 2.32e-11 | 63.5 |
Find 84 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCCTTGCTTGGCCTTTC+TGG | -0.016773 | 3.3:-73210058 | MS.gene75439:CDS |
| TATTACCTCACTGGCATATT+TGG | 0.173606 | 3.3:-73210351 | MS.gene75439:CDS |
| CATAATGGCTTTGATTGTTC+TGG | 0.199353 | 3.3:-73209223 | MS.gene75439:CDS |
| GGTGGTTGTTTGGGAGGTGC+TGG | 0.240913 | 3.3:-73209270 | MS.gene75439:CDS |
| TAGATGGTTACCAGCAAAAT+TGG | 0.258741 | 3.3:-73210319 | MS.gene75439:CDS |
| TTGGGAGGTGCTGGGGAAGC+AGG | 0.268603 | 3.3:-73209261 | MS.gene75439:CDS |
| ACTATCACATACTTGCTAAA+AGG | 0.302128 | 3.3:-73209125 | MS.gene75439:CDS |
| TTGCCTTGCTTGGCCTTTCT+GGG | 0.302492 | 3.3:-73210057 | MS.gene75439:CDS |
| GTGGTTGTTTGGGAGGTGCT+GGG | 0.315040 | 3.3:-73209269 | MS.gene75439:CDS |
| AATTGTTGAACATGCTCAAT+TGG | 0.315543 | 3.3:+73208218 | None:intergenic |
| ATCGAGAGTGTTTGGATCAT+TGG | 0.320049 | 3.3:-73211394 | MS.gene75439:CDS |
| CAGTGTATTGGTGGCAACTA+TGG | 0.337443 | 3.3:-73209172 | MS.gene75439:CDS |
| CTATGGTGGGTCAACGGATA+TGG | 0.338754 | 3.3:-73209155 | MS.gene75439:CDS |
| TATTTGGTTTATCTAATAGA+TGG | 0.346647 | 3.3:-73210335 | MS.gene75439:CDS |
| ACAGAATGTGGTGGTTGTTT+GGG | 0.350267 | 3.3:-73209279 | MS.gene75439:CDS |
| AAAATTGGCTTCGTATTCTC+TGG | 0.357685 | 3.3:-73210304 | MS.gene75439:CDS |
| AACAGAATGTGGTGGTTGTT+TGG | 0.360278 | 3.3:-73209280 | MS.gene75439:CDS |
| TGCCAGGCACTCTTTGTTTG+TGG | 0.365795 | 3.3:-73209344 | MS.gene75439:CDS |
| GCTACCATTACTATTCATAA+TGG | 0.370651 | 3.3:-73209238 | MS.gene75439:CDS |
| ACATGAACACGCAAATGATA+TGG | 0.373142 | 3.3:+73210568 | None:intergenic |
| ATATGTTCATCGAGAGTGTT+TGG | 0.381405 | 3.3:-73211402 | MS.gene75439:CDS |
| CAAATGATATGGAGCCTTGC+AGG | 0.383575 | 3.3:+73210579 | None:intergenic |
| TCGAAGAGTTCGCAATGATT+TGG | 0.388817 | 3.3:-73210014 | MS.gene75439:CDS |
| ATAATGGCTTTGATTGTTCT+GGG | 0.389717 | 3.3:-73209222 | MS.gene75439:CDS |
| TGTCTTTGTTGCTGTCAACC+TGG | 0.404337 | 3.3:-73209971 | MS.gene75439:CDS |
| GTTCAACAATTGAAAACATT+GGG | 0.429700 | 3.3:-73208206 | MS.gene75439:CDS |
| GAAGTACCTTTGCACTTACA+AGG | 0.446339 | 3.3:+73211428 | None:intergenic |
| TGGGAGGTGCTGGGGAAGCA+GGG | 0.446534 | 3.3:-73209260 | MS.gene75439:CDS |
| TCCTCGATCGACCTCGAAGC+TGG | 0.452350 | 3.3:-73212920 | MS.gene75439:CDS |
| GAAGGATCGACGGGAGGAAG+AGG | 0.452406 | 3.3:+73212941 | None:intergenic |
| GAGAGATGACAGGGTCTGAT+TGG | 0.454470 | 3.3:-73208256 | MS.gene75439:CDS |
| ATTGTTGAACATGCTCAATT+GGG | 0.459333 | 3.3:+73208219 | None:intergenic |
| ACATGCTCAATTGGGAGGGC+TGG | 0.464574 | 3.3:+73208227 | None:intergenic |
| AATCCGGCACTGGATTTGTT+CGG | 0.468251 | 3.3:+73212892 | None:intergenic |
| CATCAGTTTCGAGACAAATC+CGG | 0.477726 | 3.3:+73212876 | None:intergenic |
| TGGTTGTTTGGGAGGTGCTG+GGG | 0.478836 | 3.3:-73209268 | MS.gene75439:CDS |
| GACTCATTCAAACTCATAAG+AGG | 0.486898 | 3.3:+73208183 | None:intergenic |
| GTTCGGAAGGACCAGCTTCG+AGG | 0.486967 | 3.3:+73212909 | None:intergenic |
| GTCCACAAACAAAGAGTGCC+TGG | 0.491072 | 3.3:+73209342 | None:intergenic |
| GGATCGACGGGAGGAAGAGG+TGG | 0.492231 | 3.3:+73212944 | None:intergenic |
| GTCTTTGTTGCTGTCAACCT+GGG | 0.492579 | 3.3:-73209970 | MS.gene75439:intron |
| ATGTTGCTGCTGATAGGAAA+TGG | 0.495568 | 3.3:-73210549 | MS.gene75439:CDS |
| TGTGCTGACTGTCATTTGCC+AGG | 0.495824 | 3.3:-73209360 | MS.gene75439:CDS |
| AAATTGGCTTCGTATTCTCT+GGG | 0.495827 | 3.3:-73210303 | MS.gene75439:CDS |
| TTTCGAGACAAATCCGGCAC+TGG | 0.502240 | 3.3:+73212882 | None:intergenic |
| TGTTCAACAATTGAAAACAT+TGG | 0.502580 | 3.3:-73208207 | MS.gene75439:CDS |
| TATGCAGATTATTACCTCAC+TGG | 0.509216 | 3.3:-73210360 | MS.gene75439:intron |
| GTGTTCATGTTGCTGCTGAT+AGG | 0.512174 | 3.3:-73210555 | MS.gene75439:CDS |
| AAGTAATGAAGCACCCAGAA+AGG | 0.537570 | 3.3:+73210044 | None:intergenic |
| ACCACCACATTCTGTTGCCA+TGG | 0.539867 | 3.3:+73209287 | None:intergenic |
| GATGTCGATGGAGAGATGAC+AGG | 0.540296 | 3.3:-73208266 | MS.gene75439:CDS |
| CAAAGACATAATTCTCTACA+AGG | 0.540904 | 3.3:+73209986 | None:intergenic |
| TGCTCAATTGGGAGGGCTGG+AGG | 0.549699 | 3.3:+73208230 | None:intergenic |
| GTCGATCGAGGAAGGATCGA+CGG | 0.549972 | 3.3:+73212931 | None:intergenic |
| GGATCATTGGCGATCTGTCA+AGG | 0.559553 | 3.3:-73211381 | MS.gene75439:intron |
| AAAGCCATTATGAATAGTAA+TGG | 0.561026 | 3.3:+73209234 | None:intergenic |
| TCGATCGAGGAAGGATCGAC+GGG | 0.570169 | 3.3:+73212932 | None:intergenic |
| CTTCCGAACAAATCCAGTGC+CGG | 0.570393 | 3.3:-73212895 | MS.gene75439:CDS |
| TGCTCACTGCACTACCTGCA+AGG | 0.573977 | 3.3:-73210593 | MS.gene75439:CDS |
| AAGAGGTGGGACGAGAGGTG+AGG | 0.574463 | 3.3:+73212958 | None:intergenic |
| GGAGGAAGAGGTGGGACGAG+AGG | 0.579989 | 3.3:+73212953 | None:intergenic |
| GTTGAACATGCTCAATTGGG+AGG | 0.580202 | 3.3:+73208222 | None:intergenic |
| GCACCCAGAAAGGCCAAGCA+AGG | 0.580394 | 3.3:+73210054 | None:intergenic |
| TGCTAAAAGGATGTTAACAA+AGG | 0.581562 | 3.3:-73209112 | MS.gene75439:intron |
| GATCGACGGGAGGAAGAGGT+GGG | 0.583686 | 3.3:+73212945 | None:intergenic |
| TGTATTGGTGGCAACTATGG+TGG | 0.584245 | 3.3:-73209169 | MS.gene75439:CDS |
| ATAGCTCCTTGTAAGTGCAA+AGG | 0.586353 | 3.3:-73211434 | MS.gene75439:CDS |
| CGGATTTGTCTCGAAACTGA+TGG | 0.587776 | 3.3:-73212875 | MS.gene75439:intron |
| GCTTCGAGGTCGATCGAGGA+AGG | 0.591650 | 3.3:+73212923 | None:intergenic |
| GGTGTCTGATTCTGAGTGAT+CGG | 0.596499 | 3.3:+73212979 | None:intergenic |
| TATGTTGTTGAAGATGTCGA+TGG | 0.604679 | 3.3:-73208278 | MS.gene75439:CDS |
| CGGCACTGGATTTGTTCGGA+AGG | 0.606477 | 3.3:+73212896 | None:intergenic |
| GAATGTGGTGGTTGTTTGGG+AGG | 0.607809 | 3.3:-73209276 | MS.gene75439:CDS |
| ACCAGCTTCGAGGTCGATCG+AGG | 0.612461 | 3.3:+73212919 | None:intergenic |
| TGGCAACTATGGTGGGTCAA+CGG | 0.621902 | 3.3:-73209161 | MS.gene75439:CDS |
| CTGAGCTTCTATTATATATG+CGG | 0.622061 | 3.3:-73210266 | MS.gene75439:intron |
| ATCGAGGAAGGATCGACGGG+AGG | 0.639041 | 3.3:+73212935 | None:intergenic |
| TTGAACATGCTCAATTGGGA+GGG | 0.643417 | 3.3:+73208223 | None:intergenic |
| ATGTCGATGGAGAGATGACA+GGG | 0.646001 | 3.3:-73208265 | MS.gene75439:CDS |
| AATTGGCTTCGTATTCTCTG+GGG | 0.662271 | 3.3:-73210302 | MS.gene75439:CDS |
| GGAACCATGGCAACAGAATG+TGG | 0.665999 | 3.3:-73209291 | MS.gene75439:CDS |
| GTATTGGTGGCAACTATGGT+GGG | 0.696502 | 3.3:-73209168 | MS.gene75439:CDS |
| ATAAACCAAATATGCCAGTG+AGG | 0.716327 | 3.3:+73210346 | None:intergenic |
| ACCATGGCAACAGAATGTGG+TGG | 0.804367 | 3.3:-73209288 | MS.gene75439:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAATCAAACAAA+TGG | + | chr3.3:73208429-73208448 | None:intergenic | 10.0% |
| !! | AAATAAATAAATTAAAACCT+TGG | + | chr3.3:73211776-73211795 | None:intergenic | 10.0% |
| !! | ATATTGAAATAATTGTTTAT+AGG | - | chr3.3:73208778-73208797 | MS.gene75439:intron | 10.0% |
| !! | TATTGAAATAATTGTTTATA+GGG | - | chr3.3:73208779-73208798 | MS.gene75439:intron | 10.0% |
| !!! | TTAACCTTTTTTAAAAATAT+AGG | - | chr3.3:73209339-73209358 | MS.gene75439:CDS | 10.0% |
| !! | AAATCCTATATAATTAGTAA+AGG | - | chr3.3:73212245-73212264 | MS.gene75439:intron | 15.0% |
| !! | AATATTAATAATATCAGACA+GGG | + | chr3.3:73212480-73212499 | None:intergenic | 15.0% |
| !! | ATAAATAAATATGTATCCAT+CGG | + | chr3.3:73209374-73209393 | None:intergenic | 15.0% |
| !! | ATACATTTATACATTACAAT+CGG | + | chr3.3:73210765-73210784 | None:intergenic | 15.0% |
| !! | TATATAGATTATCTAATTCA+GGG | - | chr3.3:73210782-73210801 | MS.gene75439:intron | 15.0% |
| !!! | AAGCAATTTTTTTTTTTTTG+GGG | - | chr3.3:73209610-73209629 | MS.gene75439:intron | 15.0% |
| !!! | AGAAGCAATTTTTTTTTTTT+TGG | - | chr3.3:73209608-73209627 | MS.gene75439:intron | 15.0% |
| !!! | GAAGCAATTTTTTTTTTTTT+GGG | - | chr3.3:73209609-73209628 | MS.gene75439:intron | 15.0% |
| !! | AAAAATAGACAAAATATCTC+TGG | + | chr3.3:73210684-73210703 | None:intergenic | 20.0% |
| !! | AATAAAAATCAGCAGAATTT+AGG | + | chr3.3:73208502-73208521 | None:intergenic | 20.0% |
| !! | ATATACAATATCATCATCAT+TGG | + | chr3.3:73211396-73211415 | None:intergenic | 20.0% |
| !! | ATCATTGTTTAATTAATCAG+TGG | + | chr3.3:73210051-73210070 | None:intergenic | 20.0% |
| !! | ATTCTAAATAAACAAAGTGA+CGG | + | chr3.3:73212223-73212242 | None:intergenic | 20.0% |
| !! | CAAATTACCAAAAATAAAGA+AGG | + | chr3.3:73210401-73210420 | None:intergenic | 20.0% |
| !! | GAATATTAATAATATCAGAC+AGG | + | chr3.3:73212481-73212500 | None:intergenic | 20.0% |
| !! | GCATCAAATTACAAAATTTA+TGG | + | chr3.3:73209211-73209230 | None:intergenic | 20.0% |
| !! | GTATATAGATTATCTAATTC+AGG | - | chr3.3:73210781-73210800 | MS.gene75439:intron | 20.0% |
| !! | TATCCTTAATAATAATTGCA+TGG | - | chr3.3:73212808-73212827 | MS.gene75439:intron | 20.0% |
| !! | TCTACCTTTACTAATTATAT+AGG | + | chr3.3:73212252-73212271 | None:intergenic | 20.0% |
| !!! | AACACTGCTTATTTTAAAAA+GGG | - | chr3.3:73209125-73209144 | MS.gene75439:CDS | 20.0% |
| !!! | AAGCACTTTTATATTTTGAA+GGG | + | chr3.3:73211510-73211529 | None:intergenic | 20.0% |
| !!! | AATGTCATTTTTAACTTTTC+CGG | + | chr3.3:73209493-73209512 | None:intergenic | 20.0% |
| !!! | AGATATTTTGTCTATTTTTC+TGG | - | chr3.3:73210685-73210704 | MS.gene75439:intron | 20.0% |
| !!! | ATGTTTACCTTCTTTATTTT+TGG | - | chr3.3:73210391-73210410 | MS.gene75439:intron | 20.0% |
| !!! | CTAAACAAATTTTTTTACAG+AGG | - | chr3.3:73209276-73209295 | MS.gene75439:CDS | 20.0% |
| !!! | GTGTCCTATATTTTTAAAAA+AGG | + | chr3.3:73209346-73209365 | None:intergenic | 20.0% |
| !!! | TACAGTAGAATTTCATATTT+TGG | - | chr3.3:73209042-73209061 | MS.gene75439:intron | 20.0% |
| !!! | TATTTGGTTTATCTAATAGA+TGG | - | chr3.3:73210844-73210863 | MS.gene75439:intron | 20.0% |
| ! | AAAGCCATTATGAATAGTAA+TGG | + | chr3.3:73211948-73211967 | None:intergenic | 25.0% |
| ! | AAATCAACAATTCAAGACAA+TGG | + | chr3.3:73212851-73212870 | None:intergenic | 25.0% |
| ! | AAGCAAGGCAAAAAATAATA+GGG | + | chr3.3:73211113-73211132 | None:intergenic | 25.0% |
| ! | AAGTTGTTCTTATACTATGA+TGG | + | chr3.3:73209912-73209931 | None:intergenic | 25.0% |
| ! | ACAATATCTTGATCATTGAT+TGG | - | chr3.3:73208571-73208590 | MS.gene75439:intron | 25.0% |
| ! | ACATAAATATAAAACTCAGC+TGG | - | chr3.3:73211666-73211685 | MS.gene75439:intron | 25.0% |
| ! | ACTTCTTAAAGATGATTCTT+GGG | + | chr3.3:73208941-73208960 | None:intergenic | 25.0% |
| ! | AGGTAATAATCTGCATAAAA+AGG | + | chr3.3:73210816-73210835 | None:intergenic | 25.0% |
| ! | ATGAAATTCGAAAGTTGAAA+AGG | + | chr3.3:73208352-73208371 | None:intergenic | 25.0% |
| ! | ATTAATTATCACTAGGAACT+AGG | - | chr3.3:73209951-73209970 | MS.gene75439:intron | 25.0% |
| ! | ATTCCTGATTAATTATCACT+AGG | - | chr3.3:73209944-73209963 | MS.gene75439:intron | 25.0% |
| ! | CATACCTGAACTAATTATAA+CGG | + | chr3.3:73208693-73208712 | None:intergenic | 25.0% |
| ! | CTTATATGATATTCTTATCC+AGG | - | chr3.3:73210969-73210988 | MS.gene75439:intron | 25.0% |
| ! | CTTGTAATTTGAAGATGATT+TGG | + | chr3.3:73209249-73209268 | None:intergenic | 25.0% |
| ! | GTATATAATACAGAATATCC+AGG | + | chr3.3:73210441-73210460 | None:intergenic | 25.0% |
| ! | GTTCAACAATTGAAAACATT+GGG | - | chr3.3:73212973-73212992 | MS.gene75439:CDS | 25.0% |
| ! | TACTGTATAATTTCTACACA+TGG | + | chr3.3:73209029-73209048 | None:intergenic | 25.0% |
| ! | TATATAAATTTCTCGTCGTT+TGG | + | chr3.3:73209882-73209901 | None:intergenic | 25.0% |
| ! | TATGTAATAAGGGGAAATTT+GGG | + | chr3.3:73212579-73212598 | None:intergenic | 25.0% |
| ! | TCAGTAATTCATAACAAAAC+TGG | + | chr3.3:73211060-73211079 | None:intergenic | 25.0% |
| ! | TCATGATATTCAACGAATTA+CGG | + | chr3.3:73210137-73210156 | None:intergenic | 25.0% |
| ! | TGAAATAATTGTTTATAGGG+AGG | - | chr3.3:73208782-73208801 | MS.gene75439:intron | 25.0% |
| ! | TGAAATTCGAAAGTTGAAAA+GGG | + | chr3.3:73208351-73208370 | None:intergenic | 25.0% |
| ! | TGAATTACTGAATTTCATGT+TGG | - | chr3.3:73211069-73211088 | MS.gene75439:intron | 25.0% |
| ! | TGTTCAACAATTGAAAACAT+TGG | - | chr3.3:73212972-73212991 | MS.gene75439:CDS | 25.0% |
| ! | TTATATATAATGGCAATACC+AGG | - | chr3.3:73211345-73211364 | MS.gene75439:intron | 25.0% |
| ! | TTTCGGATAGTATGTAATAA+GGG | + | chr3.3:73212589-73212608 | None:intergenic | 25.0% |
| ! | TTTGTAATTTGATGCATTGA+AGG | - | chr3.3:73209216-73209235 | MS.gene75439:CDS | 25.0% |
| !! | AACTGGTAACATTTTATATG+TGG | + | chr3.3:73211043-73211062 | None:intergenic | 25.0% |
| !! | ATTGAAAGGATATTTCTGAT+GGG | - | chr3.3:73212348-73212367 | MS.gene75439:intron | 25.0% |
| !! | CAATATCTTGATCATTGATT+GGG | - | chr3.3:73208572-73208591 | MS.gene75439:intron | 25.0% |
| !! | CTTTCGAATTTCATTTTGTT+AGG | - | chr3.3:73208358-73208377 | MS.gene75439:intron | 25.0% |
| !! | GTGTTTTCAATTTTATAACC+TGG | - | chr3.3:73210420-73210439 | MS.gene75439:intron | 25.0% |
| !! | TCCTAACAACATTAGTTTAA+GGG | + | chr3.3:73208665-73208684 | None:intergenic | 25.0% |
| !!! | AAGTTTTTGATTGAGATTCT+TGG | + | chr3.3:73212276-73212295 | None:intergenic | 25.0% |
| !!! | AGTAGTTATTTTTACCTAGA+AGG | - | chr3.3:73208966-73208985 | MS.gene75439:intron | 25.0% |
| !!! | ATTTGAAGATGATTTGGTTT+TGG | + | chr3.3:73209243-73209262 | None:intergenic | 25.0% |
| !!! | CAACACTGCTTATTTTAAAA+AGG | - | chr3.3:73209124-73209143 | MS.gene75439:CDS | 25.0% |
| !!! | CAAGCACTTTTATATTTTGA+AGG | + | chr3.3:73211511-73211530 | None:intergenic | 25.0% |
| !!! | GTCTATTTTGGTCTAAATTT+TGG | - | chr3.3:73211611-73211630 | MS.gene75439:intron | 25.0% |
| !!! | TTTCGATTTCTTTTGAGAAA+TGG | + | chr3.3:73210232-73210251 | None:intergenic | 25.0% |
| AATTGTTGAACATGCTCAAT+TGG | + | chr3.3:73212964-73212983 | None:intergenic | 30.0% | |
| AGAAATCGAAAGATCCATTT+AGG | - | chr3.3:73210241-73210260 | MS.gene75439:intron | 30.0% | |
| AGAAATGACCTATATTACAG+GGG | - | chr3.3:73209305-73209324 | MS.gene75439:CDS | 30.0% | |
| ATGACCGTTATAATTAGTTC+AGG | - | chr3.3:73208686-73208705 | MS.gene75439:intron | 30.0% | |
| ATGTAATAAGGGGAAATTTG+GGG | + | chr3.3:73212578-73212597 | None:intergenic | 30.0% | |
| ATTAATAATATCAGACAGGG+AGG | + | chr3.3:73212477-73212496 | None:intergenic | 30.0% | |
| ATTGCTTTAGCACAAAATAG+CGG | - | chr3.3:73211427-73211446 | MS.gene75439:CDS | 30.0% | |
| ATTGTTGAACATGCTCAATT+GGG | + | chr3.3:73212963-73212982 | None:intergenic | 30.0% | |
| CAAAGACATAATTCTCTACA+AGG | + | chr3.3:73211196-73211215 | None:intergenic | 30.0% | |
| CAAGCAAGGCAAAAAATAAT+AGG | + | chr3.3:73211114-73211133 | None:intergenic | 30.0% | |
| CACTTCTTAAAGATGATTCT+TGG | + | chr3.3:73208942-73208961 | None:intergenic | 30.0% | |
| CAGAAATGACCTATATTACA+GGG | - | chr3.3:73209304-73209323 | MS.gene75439:CDS | 30.0% | |
| CATGATATTCAACGAATTAC+GGG | + | chr3.3:73210136-73210155 | None:intergenic | 30.0% | |
| CGTTATAATTAGTTCAGGTA+TGG | - | chr3.3:73208691-73208710 | MS.gene75439:intron | 30.0% | |
| CTAATGATGATTAATGACCA+AGG | - | chr3.3:73211756-73211775 | MS.gene75439:intron | 30.0% | |
| CTGAGCTTCTATTATATATG+CGG | - | chr3.3:73210913-73210932 | MS.gene75439:intron | 30.0% | |
| GACGAAAAAACGAAATTTCA+AGG | + | chr3.3:73210660-73210679 | None:intergenic | 30.0% | |
| GCACCATGCAATTATTATTA+AGG | + | chr3.3:73212814-73212833 | None:intergenic | 30.0% | |
| GCTACCATTACTATTCATAA+TGG | - | chr3.3:73211941-73211960 | MS.gene75439:intron | 30.0% | |
| GGCTTCAAAAACTAAACTTT+AGG | + | chr3.3:73210497-73210516 | None:intergenic | 30.0% | |
| GTATGTAATAAGGGGAAATT+TGG | + | chr3.3:73212580-73212599 | None:intergenic | 30.0% | |
| GTTCCTAGTGATAATTAATC+AGG | + | chr3.3:73209950-73209969 | None:intergenic | 30.0% | |
| GTTTCGGATAGTATGTAATA+AGG | + | chr3.3:73212590-73212609 | None:intergenic | 30.0% | |
| TACACACCCCATAAAAAAAT+TGG | + | chr3.3:73208759-73208778 | None:intergenic | 30.0% | |
| TAGTAGTGATGATCAATGAA+TGG | + | chr3.3:73209537-73209556 | None:intergenic | 30.0% | |
| TATATATAGCAATAGTCGCA+AGG | - | chr3.3:73208805-73208824 | MS.gene75439:intron | 30.0% | |
| TATGTGATGCATCTTATTGT+TGG | - | chr3.3:73211710-73211729 | MS.gene75439:intron | 30.0% | |
| TATTATGCCAGAACTATGAT+TGG | - | chr3.3:73211574-73211593 | MS.gene75439:intron | 30.0% | |
| TCAGAAATGACCTATATTAC+AGG | - | chr3.3:73209303-73209322 | MS.gene75439:CDS | 30.0% | |
| TCCCTTAAACTAATGTTGTT+AGG | - | chr3.3:73208661-73208680 | MS.gene75439:intron | 30.0% | |
| TGCTAAAAGGATGTTAACAA+AGG | - | chr3.3:73212067-73212086 | MS.gene75439:intron | 30.0% | |
| TGGACTCAAATATAAGCAAA+TGG | - | chr3.3:73208611-73208630 | MS.gene75439:intron | 30.0% | |
| TTCGGATAGTATGTAATAAG+GGG | + | chr3.3:73212588-73212607 | None:intergenic | 30.0% | |
| TTTCTCATTTACTGTGTCTT+TGG | - | chr3.3:73212104-73212123 | MS.gene75439:intron | 30.0% | |
| ! | ACTATCACATACTTGCTAAA+AGG | - | chr3.3:73212054-73212073 | MS.gene75439:intron | 30.0% |
| ! | ACTGCACTTACATTTTGTAA+TGG | - | chr3.3:73211455-73211474 | MS.gene75439:intron | 30.0% |
| ! | CATTAGTTTAAGGGAACTAT+CGG | + | chr3.3:73208656-73208675 | None:intergenic | 30.0% |
| ! | CTCCTAACAACATTAGTTTA+AGG | + | chr3.3:73208666-73208685 | None:intergenic | 30.0% |
| ! | CTGCACTTACATTTTGTAAT+GGG | - | chr3.3:73211456-73211475 | MS.gene75439:intron | 30.0% |
| ! | GATATTTTACAGTGTATTGG+TGG | - | chr3.3:73211998-73212017 | MS.gene75439:intron | 30.0% |
| ! | GATGTTAACAAAGGTTTGTT+TGG | - | chr3.3:73212076-73212095 | MS.gene75439:intron | 30.0% |
| ! | GATTGAAAGGATATTTCTGA+TGG | - | chr3.3:73212347-73212366 | MS.gene75439:intron | 30.0% |
| ! | GGTAACATTTTATATGTGGA+AGG | + | chr3.3:73211039-73211058 | None:intergenic | 30.0% |
| ! | TAAGCGTTGTATGTGTTAAA+TGG | - | chr3.3:73210537-73210556 | MS.gene75439:CDS | 30.0% |
| ! | TGGGACTTTTTACAGTAATT+GGG | - | chr3.3:73211976-73211995 | MS.gene75439:intron | 30.0% |
| ! | TGGGATATTTTACAGTGTAT+TGG | - | chr3.3:73211995-73212014 | MS.gene75439:intron | 30.0% |
| !! | ATAATGGCTTTGATTGTTCT+GGG | - | chr3.3:73211957-73211976 | MS.gene75439:intron | 30.0% |
| !! | ATTTCTTTTGAGAAATGGAG+AGG | + | chr3.3:73210227-73210246 | None:intergenic | 30.0% |
| !! | TGTGTTTTTAACAGTGTCAA+AGG | + | chr3.3:73211264-73211283 | None:intergenic | 30.0% |
| !!! | ATGGTATTTGGTGTCTATTT+TGG | - | chr3.3:73211599-73211618 | MS.gene75439:intron | 30.0% |
| !!! | CTATTATTTTTTGCCTTGCT+TGG | - | chr3.3:73211112-73211131 | MS.gene75439:intron | 30.0% |
| AAAATGTCTGTAATGCTCAC+TGG | + | chr3.3:73212779-73212798 | None:intergenic | 35.0% | |
| AAATATGTATCCATCGGTGT+TGG | + | chr3.3:73209368-73209387 | None:intergenic | 35.0% | |
| AAATGAGCAAGGTATAGACA+GGG | + | chr3.3:73210351-73210370 | None:intergenic | 35.0% | |
| AAGAAATGGAAGAGCAATAG+GGG | + | chr3.3:73212711-73212730 | None:intergenic | 35.0% | |
| AAGGAGAAAACTCTGAACTT+GGG | + | chr3.3:73211020-73211039 | None:intergenic | 35.0% | |
| AATTGTACCACAGGAAGAAA+TGG | + | chr3.3:73212725-73212744 | None:intergenic | 35.0% | |
| ACATGAACACGCAAATGATA+TGG | + | chr3.3:73210614-73210633 | None:intergenic | 35.0% | |
| ACTCCTTAGACACTTCTATA+GGG | + | chr3.3:73209575-73209594 | None:intergenic | 35.0% | |
| AGACAATGGCAGAATATTTC+AGG | + | chr3.3:73212837-73212856 | None:intergenic | 35.0% | |
| AGTCAGTATCTTAAACTGAC+TGG | - | chr3.3:73209991-73210010 | MS.gene75439:CDS | 35.0% | |
| ATAAACCAAATATGCCAGTG+AGG | + | chr3.3:73210836-73210855 | None:intergenic | 35.0% | |
| ATTATCACTAGGAACTAGGA+AGG | - | chr3.3:73209955-73209974 | MS.gene75439:intron | 35.0% | |
| CAATCGGATAAGTATGTAGA+TGG | + | chr3.3:73210749-73210768 | None:intergenic | 35.0% | |
| CACTTCAAATCTCGATTGAA+AGG | - | chr3.3:73212334-73212353 | MS.gene75439:intron | 35.0% | |
| CATTCATCCATCTACTATAC+CGG | - | chr3.3:73209471-73209490 | MS.gene75439:intron | 35.0% | |
| CTATGATTGGAGATGGTATT+TGG | - | chr3.3:73211587-73211606 | MS.gene75439:intron | 35.0% | |
| CTATTATTTCCGATAACCGT+TGG | + | chr3.3:73208836-73208855 | None:intergenic | 35.0% | |
| CTGTGGTACAATTTAGTCAT+GGG | - | chr3.3:73212732-73212751 | MS.gene75439:intron | 35.0% | |
| GAAATGACCTATATTACAGG+GGG | - | chr3.3:73209306-73209325 | MS.gene75439:CDS | 35.0% | |
| GAAGAAATGGAAGAGCAATA+GGG | + | chr3.3:73212712-73212731 | None:intergenic | 35.0% | |
| GACAATGGCAGAATATTTCA+GGG | + | chr3.3:73212836-73212855 | None:intergenic | 35.0% | |
| TACCTGAGAAGGAAACAAAA+CGG | + | chr3.3:73209717-73209736 | None:intergenic | 35.0% | |
| TAGATGGTTACCAGCAAAAT+TGG | - | chr3.3:73210860-73210879 | MS.gene75439:intron | 35.0% | |
| TATGCAGATTATTACCTCAC+TGG | - | chr3.3:73210819-73210838 | MS.gene75439:intron | 35.0% | |
| TATGTTGTTGAAGATGTCGA+TGG | - | chr3.3:73212901-73212920 | MS.gene75439:CDS | 35.0% | |
| TATTACCTCACTGGCATATT+TGG | - | chr3.3:73210828-73210847 | MS.gene75439:intron | 35.0% | |
| TCACATGCATTGTTCTGTAT+GGG | - | chr3.3:73212415-73212434 | MS.gene75439:intron | 35.0% | |
| TGAATATCATGACACTGCAA+AGG | - | chr3.3:73210145-73210164 | MS.gene75439:intron | 35.0% | |
| TGCTCATTTCAGTCAAAGAA+AGG | - | chr3.3:73210362-73210381 | MS.gene75439:intron | 35.0% | |
| TGTAATAAGGGGAAATTTGG+GGG | + | chr3.3:73212577-73212596 | None:intergenic | 35.0% | |
| TGTTAAATGGTGTACTTTGC+AGG | - | chr3.3:73210550-73210569 | MS.gene75439:CDS | 35.0% | |
| TTATCACTAGGAACTAGGAA+GGG | - | chr3.3:73209956-73209975 | MS.gene75439:intron | 35.0% | |
| TTCTTTGACTGAAATGAGCA+AGG | + | chr3.3:73210362-73210381 | None:intergenic | 35.0% | |
| TTGTGCTAAAGCAATGAGAA+TGG | + | chr3.3:73211422-73211441 | None:intergenic | 35.0% | |
| ! | AAAATTGGCTTCGTATTCTC+TGG | - | chr3.3:73210875-73210894 | MS.gene75439:intron | 35.0% |
| ! | AAATTGGCTTCGTATTCTCT+GGG | - | chr3.3:73210876-73210895 | MS.gene75439:intron | 35.0% |
| ! | AACTTTTCCGGTATAGTAGA+TGG | + | chr3.3:73209481-73209500 | None:intergenic | 35.0% |
| ! | ATGTTGGCATTTTCAAATGC+AGG | - | chr3.3:73211085-73211104 | MS.gene75439:intron | 35.0% |
| ! | CTGGGACTTTTTACAGTAAT+TGG | - | chr3.3:73211975-73211994 | MS.gene75439:intron | 35.0% |
| ! | CTGTTGTTACTTCTCATCAT+AGG | - | chr3.3:73212876-73212895 | MS.gene75439:CDS | 35.0% |
| ! | TGTTTTACCCCCTGTAATAT+AGG | + | chr3.3:73209316-73209335 | None:intergenic | 35.0% |
| ! | TTTTTAACAGTGTCAAAGGC+TGG | + | chr3.3:73211260-73211279 | None:intergenic | 35.0% |
| !! | AAACAAAGTGACGGATAACT+GGG | + | chr3.3:73212214-73212233 | None:intergenic | 35.0% |
| !! | ATATGTTCATCGAGAGTGTT+TGG | - | chr3.3:73209777-73209796 | MS.gene75439:intron | 35.0% |
| !! | CATAATGGCTTTGATTGTTC+TGG | - | chr3.3:73211956-73211975 | MS.gene75439:intron | 35.0% |
| !! | TAAACAAAGTGACGGATAAC+TGG | + | chr3.3:73212215-73212234 | None:intergenic | 35.0% |
| !! | TATAAAAGTGCTTGTCGTTC+TGG | - | chr3.3:73211517-73211536 | MS.gene75439:intron | 35.0% |
| !! | TTTTGTTTCCTTCTCAGGTA+GGG | - | chr3.3:73209717-73209736 | MS.gene75439:intron | 35.0% |
| AAACTTGCATATGCAGCAGA+TGG | + | chr3.3:73212622-73212641 | None:intergenic | 40.0% | |
| AAATGGTGTACTTTGCAGGA+AGG | - | chr3.3:73210554-73210573 | MS.gene75439:CDS | 40.0% | |
| AACAGAATGTGGTGGTTGTT+TGG | - | chr3.3:73211899-73211918 | MS.gene75439:intron | 40.0% | |
| AACTTGCATATGCAGCAGAT+GGG | + | chr3.3:73212621-73212640 | None:intergenic | 40.0% | |
| AATGAGCAAGGTATAGACAG+GGG | + | chr3.3:73210350-73210369 | None:intergenic | 40.0% | |
| ACAGAATGTGGTGGTTGTTT+GGG | - | chr3.3:73211900-73211919 | MS.gene75439:intron | 40.0% | |
| ACCATCTCCAATCATAGTTC+TGG | + | chr3.3:73211584-73211603 | None:intergenic | 40.0% | |
| ACGCTTAGCAGACTATAAAG+TGG | + | chr3.3:73210524-73210543 | None:intergenic | 40.0% | |
| ACTCAACACATACTCCTTCT+AGG | + | chr3.3:73208983-73209002 | None:intergenic | 40.0% | |
| AGAGGATCTCAACTTAACCA+TGG | + | chr3.3:73210209-73210228 | None:intergenic | 40.0% | |
| AGGAGAAAACTCTGAACTTG+GGG | + | chr3.3:73211019-73211038 | None:intergenic | 40.0% | |
| ATAGCTCCTTGTAAGTGCAA+AGG | - | chr3.3:73209745-73209764 | MS.gene75439:intron | 40.0% | |
| ATATAGCAATAGTCGCAAGG+AGG | - | chr3.3:73208808-73208827 | MS.gene75439:intron | 40.0% | |
| ATGAAGCATGAACTTCGACA+TGG | - | chr3.3:73209095-73209114 | MS.gene75439:intron | 40.0% | |
| ATGTCACCAAGGATCAACTT+TGG | + | chr3.3:73212660-73212679 | None:intergenic | 40.0% | |
| ATGTTGCTGCTGATAGGAAA+TGG | - | chr3.3:73210630-73210649 | MS.gene75439:intron | 40.0% | |
| CACATGCATTGTTCTGTATG+GGG | - | chr3.3:73212416-73212435 | MS.gene75439:intron | 40.0% | |
| CACTCCTTAGACACTTCTAT+AGG | + | chr3.3:73209576-73209595 | None:intergenic | 40.0% | |
| CAGATGGGACAGAATTGTTT+CGG | + | chr3.3:73212606-73212625 | None:intergenic | 40.0% | |
| CATCAGTTTCGAGACAAATC+CGG | + | chr3.3:73208306-73208325 | None:intergenic | 40.0% | |
| CCATGACTAAATTGTACCAC+AGG | + | chr3.3:73212734-73212753 | None:intergenic | 40.0% | |
| CCTGTGGTACAATTTAGTCA+TGG | - | chr3.3:73212731-73212750 | MS.gene75439:intron | 40.0% | |
| CGCTTAGCAGACTATAAAGT+GGG | + | chr3.3:73210523-73210542 | None:intergenic | 40.0% | |
| CTTGTGGTTTGAGCCAATTT+CGG | + | chr3.3:73209177-73209196 | None:intergenic | 40.0% | |
| GAAACAGTTAACCTACAAGC+TGG | + | chr3.3:73210715-73210734 | None:intergenic | 40.0% | |
| GAAATGAGCAAGGTATAGAC+AGG | + | chr3.3:73210352-73210371 | None:intergenic | 40.0% | |
| GAAGGAGAAAACTCTGAACT+TGG | + | chr3.3:73211021-73211040 | None:intergenic | 40.0% | |
| GAGAGATAGACACAAATGAG+AGG | + | chr3.3:73210283-73210302 | None:intergenic | 40.0% | |
| GAGATCCTCTACAATTCGTT+TGG | + | chr3.3:73210322-73210341 | None:intergenic | 40.0% | |
| GAGGATCTCAACTTAACCAT+GGG | + | chr3.3:73210208-73210227 | None:intergenic | 40.0% | |
| GGAAGAAATGGAAGAGCAAT+AGG | + | chr3.3:73212713-73212732 | None:intergenic | 40.0% | |
| GGAGAAAAGGAGAAAATTCC+TGG | + | chr3.3:73210990-73211009 | None:intergenic | 40.0% | |
| GGGATAGAGAGATAACTGAA+GGG | + | chr3.3:73210188-73210207 | None:intergenic | 40.0% | |
| GGTACAATTTAGTCATGGGA+GGG | - | chr3.3:73212736-73212755 | MS.gene75439:intron | 40.0% | |
| GTCACATGCATTGTTCTGTA+TGG | - | chr3.3:73212414-73212433 | MS.gene75439:intron | 40.0% | |
| GTTAACTGTTTCCATCCATC+TGG | - | chr3.3:73210723-73210742 | MS.gene75439:intron | 40.0% | |
| GTTCATGCTTCATAGCTCAA+CGG | + | chr3.3:73209088-73209107 | None:intergenic | 40.0% | |
| TAAGTATGTAGATGGCCAGA+TGG | + | chr3.3:73210741-73210760 | None:intergenic | 40.0% | |
| TAGCAGACTATAAAGTGGGT+TGG | + | chr3.3:73210519-73210538 | None:intergenic | 40.0% | |
| TATAGCAATAGTCGCAAGGA+GGG | - | chr3.3:73208809-73208828 | MS.gene75439:intron | 40.0% | |
| TATGAAATCCCTACCTGAGA+AGG | + | chr3.3:73209728-73209747 | None:intergenic | 40.0% | |
| TCAGTTATCTCTCTATCCCA+TGG | - | chr3.3:73210189-73210208 | MS.gene75439:intron | 40.0% | |
| TCGAAGAGTTCGCAATGATT+TGG | - | chr3.3:73211165-73211184 | MS.gene75439:intron | 40.0% | |
| TCGTTTGGAGAGCTCTATTT+AGG | + | chr3.3:73210307-73210326 | None:intergenic | 40.0% | |
| TGAGCCAATTTCGGTTTACA+GGG | + | chr3.3:73209168-73209187 | None:intergenic | 40.0% | |
| TGGGATAGAGAGATAACTGA+AGG | + | chr3.3:73210189-73210208 | None:intergenic | 40.0% | |
| TGGTACAATTTAGTCATGGG+AGG | - | chr3.3:73212735-73212754 | MS.gene75439:intron | 40.0% | |
| TGTCACCAAGGATCAACTTT+GGG | + | chr3.3:73212659-73212678 | None:intergenic | 40.0% | |
| TTGAACATGCTCAATTGGGA+GGG | + | chr3.3:73212959-73212978 | None:intergenic | 40.0% | |
| TTGAGCCAATTTCGGTTTAC+AGG | + | chr3.3:73209169-73209188 | None:intergenic | 40.0% | |
| ! | AAATTGGCTCAAACCACAAG+GGG | - | chr3.3:73209177-73209196 | MS.gene75439:CDS | 40.0% |
| ! | AAGTAATGAAGCACCCAGAA+AGG | + | chr3.3:73211138-73211157 | None:intergenic | 40.0% |
| ! | AATTGGCTTCGTATTCTCTG+GGG | - | chr3.3:73210877-73210896 | MS.gene75439:intron | 40.0% |
| ! | AGCAGACTATAAAGTGGGTT+GGG | + | chr3.3:73210518-73210537 | None:intergenic | 40.0% |
| ! | GAAATTGGCTCAAACCACAA+GGG | - | chr3.3:73209176-73209195 | MS.gene75439:CDS | 40.0% |
| ! | GAAGTACCTTTGCACTTACA+AGG | + | chr3.3:73209754-73209773 | None:intergenic | 40.0% |
| ! | GAATACGAAGCCAATTTTGC+TGG | + | chr3.3:73210873-73210892 | None:intergenic | 40.0% |
| ! | GATCCATTTAGGACAGAGAT+AGG | - | chr3.3:73210252-73210271 | MS.gene75439:intron | 40.0% |
| ! | TAAAATCAGTGCTGTTACCC+AGG | + | chr3.3:73211229-73211248 | None:intergenic | 40.0% |
| ! | TAGAAGGAGTATGTGTTGAG+TGG | - | chr3.3:73208982-73209001 | MS.gene75439:intron | 40.0% |
| ! | TGATTGCACTGCATGTTTTG+AGG | - | chr3.3:73211860-73211879 | MS.gene75439:intron | 40.0% |
| ! | TGGGCTTTGATTCGAATTGT+TGG | - | chr3.3:73208591-73208610 | MS.gene75439:intron | 40.0% |
| !! | AAGCCCTATAGAAGTGTCTA+AGG | - | chr3.3:73209569-73209588 | MS.gene75439:intron | 40.0% |
| !! | ATCGAGAGTGTTTGGATCAT+TGG | - | chr3.3:73209785-73209804 | MS.gene75439:intron | 40.0% |
| !! | GATTGCACTGCATGTTTTGA+GGG | - | chr3.3:73211861-73211880 | MS.gene75439:intron | 40.0% |
| !!! | AGGGGGCCAATTTTTTTATG+GGG | - | chr3.3:73208750-73208769 | MS.gene75439:intron | 40.0% |
| !!! | CAGGGGGCCAATTTTTTTAT+GGG | - | chr3.3:73208749-73208768 | MS.gene75439:intron | 40.0% |
| !!! | GTTTTGTTTCCTTCTCAGGT+AGG | - | chr3.3:73209716-73209735 | MS.gene75439:intron | 40.0% |
| !!! | TACCGTTTTGTTTCCTTCTC+AGG | - | chr3.3:73209712-73209731 | MS.gene75439:intron | 40.0% |
| !!! | TCAGGGGGCCAATTTTTTTA+TGG | - | chr3.3:73208748-73208767 | MS.gene75439:intron | 40.0% |
| ACATTTACTGACGTACCCCA+GGG | + | chr3.3:73208874-73208893 | None:intergenic | 45.0% | |
| ACCTCCCTGTAAACCGAAAT+TGG | - | chr3.3:73209161-73209180 | MS.gene75439:CDS | 45.0% | |
| AGTATGTGTTGAGTGGTGCT+TGG | - | chr3.3:73208989-73209008 | MS.gene75439:intron | 45.0% | |
| ATAACGACGCTTCAAGCAGA+TGG | + | chr3.3:73211302-73211321 | None:intergenic | 45.0% | |
| ATATAGGACACCAACACCGA+TGG | - | chr3.3:73209355-73209374 | MS.gene75439:CDS | 45.0% | |
| ATGTCGATGGAGAGATGACA+GGG | - | chr3.3:73212914-73212933 | MS.gene75439:CDS | 45.0% | |
| CAAATGATATGGAGCCTTGC+AGG | + | chr3.3:73210603-73210622 | None:intergenic | 45.0% | |
| CGATATATCATGCACAGCTC+TGG | + | chr3.3:73209678-73209697 | None:intergenic | 45.0% | |
| CGGATTTGTCTCGAAACTGA+TGG | - | chr3.3:73208304-73208323 | MS.gene75439:intron | 45.0% | |
| GAAATTTGGGGGACGAAATG+AGG | + | chr3.3:73212566-73212585 | None:intergenic | 45.0% | |
| GACAGTTGTCTGACGAGTTT+CGG | - | chr3.3:73209632-73209651 | MS.gene75439:intron | 45.0% | |
| GCCAGAACTATGATTGGAGA+TGG | - | chr3.3:73211580-73211599 | MS.gene75439:intron | 45.0% | |
| GCTCTCCAAACGAATTGTAG+AGG | - | chr3.3:73210314-73210333 | MS.gene75439:CDS | 45.0% | |
| GGACGAAATGAGGTACGAAT+GGG | + | chr3.3:73212556-73212575 | None:intergenic | 45.0% | |
| GGTGTCTGATTCTGAGTGAT+CGG | + | chr3.3:73208203-73208222 | None:intergenic | 45.0% | |
| GTATGTGTTGAGTGGTGCTT+GGG | - | chr3.3:73208990-73209009 | MS.gene75439:intron | 45.0% | |
| GTCTTTGTTGCTGTCAACCT+GGG | - | chr3.3:73211209-73211228 | MS.gene75439:intron | 45.0% | |
| GTGCCTATCTCTGTCCTAAA+TGG | + | chr3.3:73210258-73210277 | None:intergenic | 45.0% | |
| GTGTAGTGTACGCTAAAACC+TGG | + | chr3.3:73211366-73211385 | None:intergenic | 45.0% | |
| GTGTTCATGTTGCTGCTGAT+AGG | - | chr3.3:73210624-73210643 | MS.gene75439:intron | 45.0% | |
| GTTGAACATGCTCAATTGGG+AGG | + | chr3.3:73212960-73212979 | None:intergenic | 45.0% | |
| TACATTTACTGACGTACCCC+AGG | + | chr3.3:73208875-73208894 | None:intergenic | 45.0% | |
| TAGGAGTTAGCAGAACACTC+AGG | + | chr3.3:73212516-73212535 | None:intergenic | 45.0% | |
| TATGTAGATGGCCAGATGGA+TGG | + | chr3.3:73210737-73210756 | None:intergenic | 45.0% | |
| TCAGCTACTAGCGTAACTCT+AGG | - | chr3.3:73212392-73212411 | MS.gene75439:intron | 45.0% | |
| TGCTCTTCCATTTCTTCCTG+TGG | - | chr3.3:73212715-73212734 | MS.gene75439:intron | 45.0% | |
| TGTCTTTGTTGCTGTCAACC+TGG | - | chr3.3:73211208-73211227 | MS.gene75439:intron | 45.0% | |
| TTTGTGAGAGGGTGAAGTGA+CGG | - | chr3.3:73208715-73208734 | MS.gene75439:intron | 45.0% | |
| ! | AATCCGGCACTGGATTTGTT+CGG | + | chr3.3:73208290-73208309 | None:intergenic | 45.0% |
| ! | ACGGGCTAATACACATCGAT+TGG | + | chr3.3:73210118-73210137 | None:intergenic | 45.0% |
| ! | CAACTCCCAAAGTTGATCCT+TGG | - | chr3.3:73212651-73212670 | MS.gene75439:intron | 45.0% |
| ! | CAAGGATCAACTTTGGGAGT+TGG | + | chr3.3:73212653-73212672 | None:intergenic | 45.0% |
| ! | CACTTGTTGACCACTAAGCA+AGG | + | chr3.3:73210020-73210039 | None:intergenic | 45.0% |
| ! | CAGTGTATTGGTGGCAACTA+TGG | - | chr3.3:73212007-73212026 | MS.gene75439:intron | 45.0% |
| ! | CGAAATTGGCTCAAACCACA+AGG | - | chr3.3:73209175-73209194 | MS.gene75439:CDS | 45.0% |
| ! | GTATTGGTGGCAACTATGGT+GGG | - | chr3.3:73212011-73212030 | MS.gene75439:intron | 45.0% |
| ! | TGTATTGGTGGCAACTATGG+TGG | - | chr3.3:73212010-73212029 | MS.gene75439:intron | 45.0% |
| !! | TCAGGTATGGCTTTGTGAGA+GGG | - | chr3.3:73208704-73208723 | MS.gene75439:intron | 45.0% |
| !! | TTCAGGTATGGCTTTGTGAG+AGG | - | chr3.3:73208703-73208722 | MS.gene75439:intron | 45.0% |
| !! | ATTAACTATATTATATATAA+TGG | - | chr3.3:73211335-73211354 | MS.gene75439:intron | 5.0% |
| AAGGAGGGACCAACGGTTAT+CGG | - | chr3.3:73208824-73208843 | MS.gene75439:intron | 50.0% | |
| ACACTCACGTACTCATGAGG+GGG | + | chr3.3:73212683-73212702 | None:intergenic | 50.0% | |
| ACCACCACATTCTGTTGCCA+TGG | + | chr3.3:73211895-73211914 | None:intergenic | 50.0% | |
| ACCATGGCAACAGAATGTGG+TGG | - | chr3.3:73211891-73211910 | MS.gene75439:intron | 50.0% | |
| ACTCTGAACTTGGGGCAAGA+TGG | + | chr3.3:73211011-73211030 | None:intergenic | 50.0% | |
| AGTCCAGCAGTTCTTAACCC+TGG | - | chr3.3:73208854-73208873 | MS.gene75439:intron | 50.0% | |
| AGTGACGGTGAAGAAGGTTC+AGG | - | chr3.3:73208730-73208749 | MS.gene75439:intron | 50.0% | |
| CACACTCACGTACTCATGAG+GGG | + | chr3.3:73212684-73212703 | None:intergenic | 50.0% | |
| CTTCCGAACAAATCCAGTGC+CGG | - | chr3.3:73208284-73208303 | MS.gene75439:CDS | 50.0% | |
| CTTGGGGCAAGATGGAGAAA+AGG | + | chr3.3:73211003-73211022 | None:intergenic | 50.0% | |
| GAATGTGGTGGTTGTTTGGG+AGG | - | chr3.3:73211903-73211922 | MS.gene75439:intron | 50.0% | |
| GAGAGATGACAGGGTCTGAT+TGG | - | chr3.3:73212923-73212942 | MS.gene75439:CDS | 50.0% | |
| GATGTCGATGGAGAGATGAC+AGG | - | chr3.3:73212913-73212932 | MS.gene75439:CDS | 50.0% | |
| GCACACTCACGTACTCATGA+GGG | + | chr3.3:73212685-73212704 | None:intergenic | 50.0% | |
| GCCAATTTCGGTTTACAGGG+AGG | + | chr3.3:73209165-73209184 | None:intergenic | 50.0% | |
| GGAACCATGGCAACAGAATG+TGG | - | chr3.3:73211888-73211907 | MS.gene75439:intron | 50.0% | |
| GGATCATTGGCGATCTGTCA+AGG | - | chr3.3:73209798-73209817 | MS.gene75439:intron | 50.0% | |
| GGGACGAAATGAGGTACGAA+TGG | + | chr3.3:73212557-73212576 | None:intergenic | 50.0% | |
| GTCCAGCAGTTCTTAACCCT+GGG | - | chr3.3:73208855-73208874 | MS.gene75439:intron | 50.0% | |
| GTCTGACGAGTTTCGGACAT+CGG | - | chr3.3:73209639-73209658 | MS.gene75439:intron | 50.0% | |
| GTGACGGTGAAGAAGGTTCA+GGG | - | chr3.3:73208731-73208750 | MS.gene75439:intron | 50.0% | |
| TATGGTACTTTCGCCCCTTG+TGG | + | chr3.3:73209193-73209212 | None:intergenic | 50.0% | |
| TCACTAGGAACTAGGAAGGG+TGG | - | chr3.3:73209959-73209978 | MS.gene75439:intron | 50.0% | |
| TCCAGCAGTTCTTAACCCTG+GGG | - | chr3.3:73208856-73208875 | MS.gene75439:intron | 50.0% | |
| TCTGACGAGTTTCGGACATC+GGG | - | chr3.3:73209640-73209659 | MS.gene75439:intron | 50.0% | |
| TGACGGTGAAGAAGGTTCAG+GGG | - | chr3.3:73208732-73208751 | MS.gene75439:intron | 50.0% | |
| TGACTGGAAGCCTTGCTTAG+TGG | - | chr3.3:73210007-73210026 | MS.gene75439:CDS | 50.0% | |
| TGCACACTCACGTACTCATG+AGG | + | chr3.3:73212686-73212705 | None:intergenic | 50.0% | |
| TTTCGAGACAAATCCGGCAC+TGG | + | chr3.3:73208300-73208319 | None:intergenic | 50.0% | |
| ! | TGCCAGGCACTCTTTGTTTG+TGG | - | chr3.3:73211835-73211854 | MS.gene75439:intron | 50.0% |
| ! | TTGCCTTGCTTGGCCTTTCT+GGG | - | chr3.3:73211122-73211141 | MS.gene75439:intron | 50.0% |
| ! | TTTGCCTTGCTTGGCCTTTC+TGG | - | chr3.3:73211121-73211140 | MS.gene75439:intron | 50.0% |
| !! | CTATGGTGGGTCAACGGATA+TGG | - | chr3.3:73212024-73212043 | MS.gene75439:intron | 50.0% |
| !! | GAATGGGCTGAGTGAGAGTT+TGG | + | chr3.3:73212540-73212559 | None:intergenic | 50.0% |
| !! | GTCCACAAACAAAGAGTGCC+TGG | + | chr3.3:73211840-73211859 | None:intergenic | 50.0% |
| !! | TGGCAACTATGGTGGGTCAA+CGG | - | chr3.3:73212018-73212037 | MS.gene75439:intron | 50.0% |
| !! | TGTGCTGACTGTCATTTGCC+AGG | - | chr3.3:73211819-73211838 | MS.gene75439:intron | 50.0% |
| !! | TTTCTGGCTGTCCAGCTTGT+AGG | - | chr3.3:73210701-73210720 | MS.gene75439:intron | 50.0% |
| !! | TTTTGAGGGCTGTGGAACCA+TGG | - | chr3.3:73211875-73211894 | MS.gene75439:intron | 50.0% |
| !!! | ACTGCATGTTTTGAGGGCTG+TGG | - | chr3.3:73211867-73211886 | MS.gene75439:intron | 50.0% |
| ACATGCTCAATTGGGAGGGC+TGG | + | chr3.3:73212955-73212974 | None:intergenic | 55.0% | |
| ACCCCAGGGTTAAGAACTGC+TGG | + | chr3.3:73208860-73208879 | None:intergenic | 55.0% | |
| GACGGTGAAGAAGGTTCAGG+GGG | - | chr3.3:73208733-73208752 | MS.gene75439:intron | 55.0% | |
| GGCTGAGTGAGAGTTTGGCT+AGG | + | chr3.3:73212535-73212554 | None:intergenic | 55.0% | |
| GGGTGAAGTGACGGTGAAGA+AGG | - | chr3.3:73208724-73208743 | MS.gene75439:intron | 55.0% | |
| GTCGATCGAGGAAGGATCGA+CGG | + | chr3.3:73208251-73208270 | None:intergenic | 55.0% | |
| TAGTCGCAAGGAGGGACCAA+CGG | - | chr3.3:73208817-73208836 | MS.gene75439:intron | 55.0% | |
| TCATGAGGGGGATGTCACCA+AGG | + | chr3.3:73212671-73212690 | None:intergenic | 55.0% | |
| TCGATCGAGGAAGGATCGAC+GGG | + | chr3.3:73208250-73208269 | None:intergenic | 55.0% | |
| TGCTCACTGCACTACCTGCA+AGG | - | chr3.3:73210586-73210605 | MS.gene75439:CDS | 55.0% | |
| ! | CGGCACTGGATTTGTTCGGA+AGG | + | chr3.3:73208286-73208305 | None:intergenic | 55.0% |
| !! | GTGGTTGTTTGGGAGGTGCT+GGG | - | chr3.3:73211910-73211929 | MS.gene75439:intron | 55.0% |
| !! | TGGTTGTTTGGGAGGTGCTG+GGG | - | chr3.3:73211911-73211930 | MS.gene75439:intron | 55.0% |
| AAGAGGTGGGACGAGAGGTG+AGG | + | chr3.3:73208224-73208243 | None:intergenic | 60.0% | |
| ACCAGCTTCGAGGTCGATCG+AGG | + | chr3.3:73208263-73208282 | None:intergenic | 60.0% | |
| ATCGAGGAAGGATCGACGGG+AGG | + | chr3.3:73208247-73208266 | None:intergenic | 60.0% | |
| GAAGGATCGACGGGAGGAAG+AGG | + | chr3.3:73208241-73208260 | None:intergenic | 60.0% | |
| GATCGACGGGAGGAAGAGGT+GGG | + | chr3.3:73208237-73208256 | None:intergenic | 60.0% | |
| GCACCCAGAAAGGCCAAGCA+AGG | + | chr3.3:73211128-73211147 | None:intergenic | 60.0% | |
| GCTTCGAGGTCGATCGAGGA+AGG | + | chr3.3:73208259-73208278 | None:intergenic | 60.0% | |
| GTTCGGAAGGACCAGCTTCG+AGG | + | chr3.3:73208273-73208292 | None:intergenic | 60.0% | |
| TCCTCGATCGACCTCGAAGC+TGG | - | chr3.3:73208259-73208278 | MS.gene75439:CDS | 60.0% | |
| TGCTCAATTGGGAGGGCTGG+AGG | + | chr3.3:73212952-73212971 | None:intergenic | 60.0% | |
| ! | GGTGGTTGTTTGGGAGGTGC+TGG | - | chr3.3:73211909-73211928 | MS.gene75439:intron | 60.0% |
| GGAGGAAGAGGTGGGACGAG+AGG | + | chr3.3:73208229-73208248 | None:intergenic | 65.0% | |
| GGATCGACGGGAGGAAGAGG+TGG | + | chr3.3:73208238-73208257 | None:intergenic | 65.0% | |
| !! | TGGGAGGTGCTGGGGAAGCA+GGG | - | chr3.3:73211919-73211938 | MS.gene75439:intron | 65.0% |
| !! | TTGGGAGGTGCTGGGGAAGC+AGG | - | chr3.3:73211918-73211937 | MS.gene75439:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 73208196 | 73213005 | 73208196 | ID=MS.gene75439 |
| chr3.3 | mRNA | 73208196 | 73213005 | 73208196 | ID=MS.gene75439.t1;Parent=MS.gene75439 |
| chr3.3 | exon | 73212876 | 73213005 | 73212876 | ID=MS.gene75439.t1.exon1;Parent=MS.gene75439.t1 |
| chr3.3 | CDS | 73212876 | 73213005 | 73212876 | ID=cds.MS.gene75439.t1;Parent=MS.gene75439.t1 |
| chr3.3 | exon | 73211382 | 73211467 | 73211382 | ID=MS.gene75439.t1.exon2;Parent=MS.gene75439.t1 |
| chr3.3 | CDS | 73211382 | 73211467 | 73211382 | ID=cds.MS.gene75439.t1;Parent=MS.gene75439.t1 |
| chr3.3 | exon | 73210483 | 73210629 | 73210483 | ID=MS.gene75439.t1.exon3;Parent=MS.gene75439.t1 |
| chr3.3 | CDS | 73210483 | 73210629 | 73210483 | ID=cds.MS.gene75439.t1;Parent=MS.gene75439.t1 |
| chr3.3 | exon | 73210267 | 73210375 | 73210267 | ID=MS.gene75439.t1.exon4;Parent=MS.gene75439.t1 |
| chr3.3 | CDS | 73210267 | 73210375 | 73210267 | ID=cds.MS.gene75439.t1;Parent=MS.gene75439.t1 |
| chr3.3 | exon | 73209971 | 73210094 | 73209971 | ID=MS.gene75439.t1.exon5;Parent=MS.gene75439.t1 |
| chr3.3 | CDS | 73209971 | 73210094 | 73209971 | ID=cds.MS.gene75439.t1;Parent=MS.gene75439.t1 |
| chr3.3 | exon | 73209113 | 73209386 | 73209113 | ID=MS.gene75439.t1.exon6;Parent=MS.gene75439.t1 |
| chr3.3 | CDS | 73209113 | 73209386 | 73209113 | ID=cds.MS.gene75439.t1;Parent=MS.gene75439.t1 |
| chr3.3 | exon | 73208196 | 73208303 | 73208196 | ID=MS.gene75439.t1.exon7;Parent=MS.gene75439.t1 |
| chr3.3 | CDS | 73208196 | 73208303 | 73208196 | ID=cds.MS.gene75439.t1;Parent=MS.gene75439.t1 |
| Gene Sequence |
| Protein sequence |
